mRNA_P-wetherbeei_contig825.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig825.1.1
Unique NamemRNA_P-wetherbeei_contig825.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig825.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig825contigP-wetherbeei_contig825:2..1792 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Model size1791
Hectar predicted targeting categoryother localisation
Exons1
Cds size1791
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187029.2421215-CDS-P-wetherbeei_contig825:1..17921683187029.2421215-CDS-P-wetherbeei_contig825:1..1792Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig825 2..1792 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig825.1.1prot_P-wetherbeei_contig825.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig825 2..1792 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig825.1.1

>prot_P-wetherbeei_contig825.1.1 ID=prot_P-wetherbeei_contig825.1.1|Name=mRNA_P-wetherbeei_contig825.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=597bp
WGGWTGRSSHRGGGASDYGGGGSGGYNSAPDSPRAARAAKQRKAKWASRT
AEDGAWKFADSRWKYGGRSGFFEDDTEDEDELEASLVYIWGPPPSYQSIF
AAVPEGGDGSADGSCSPAAAVAPATDAVRATGARIAAEATVMPRAKAEAT
GVETTAGTVAEHQPAAAAEPSATAAAAVALARTQPRLVKEAGSYGSFRVN
RALSEVTAGADASATAGAATADGVAIAVVAAAAAAALTPVSRSRPPLPHR
HSGHTGSGIQSASARNAESPGSSNTGWRASARAGRAGSFGGASAGNSGGV
GAGSFGGGISGGNPGAVSSHRGGGSYGGYSSGGAASYASSADSGDEYEDC
VSVLSFPATSPTPSPLPPSPPALMKRQLSEGSNTSAGELSELYESCGSVT
EPPSPVPVGHGAAGTETAAAWSPSPSLSPQPPPLPPRRSTDSACSISSLP
PRPTTESGRSLSPLPPLPPRPPPVTDSDRSLSPLPPPRVGQQGLVSSQRR
EPGGPHPPPSPPPRPPLPAYKPLGPAAFQSYRVGGRSRRRASGDSRDAFS
SLPSLARCSSDGGGASGAFGGSTATRDGGSGTGGGSGGGGGGICSAV
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mRNA from alignment at P-wetherbeei_contig825:2..1792+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig825.1.1 ID=mRNA_P-wetherbeei_contig825.1.1|Name=mRNA_P-wetherbeei_contig825.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1791bp|location=Sequence derived from alignment at P-wetherbeei_contig825:2..1792+ (Phaeothamnion wetherbeei SAG_119_79)
TGGGGCGGTTGGACCGGCCGCAGCAGTCACCGCGGCGGCGGCGCCAGCGA
TTACGGTGGCGGCGGGAGCGGCGGCTACAACTCGGCGCCGGACTCGCCGC
GGGCAGCGCGAGCGGCGAAGCAGCGGAAGGCGAAGTGGGCATCACGGACG
GCGGAGGATGGCGCCTGGAAGTTCGCAGACAGCCGCTGGAAGTATGGCGG
GCGGTCTGGTTTCTTCGAGGACGACACGGAGGACGAGGACGAGCTGGAGG
CGTCGCTGGTGTACATTTGGGGCCCACCGCCGTCCTACCAGTCCATCTTT
GCGGCGGTACCCGAAGGCGGCGATGGCTCCGCCGACGGCAGCTGCTCGCC
TGCGGCAGCGGTGGCTCCGGCGACGGACGCGGTGCGGGCAACGGGCGCGA
GGATTGCAGCGGAAGCGACGGTGATGCCAAGGGCGAAGGCGGAGGCGACG
GGGGTGGAAACGACGGCGGGGACGGTGGCAGAACACCAGCCCGCTGCAGC
TGCCGAGCCATCTGCTACTGCTGCTGCGGCGGTGGCGCTGGCGAGGACTC
AGCCGCGCCTCGTGAAGGAGGCCGGCTCGTACGGGTCCTTCAGGGTCAAC
CGCGCGCTCTCGGAGGTTACTGCAGGAGCAGATGCGTCAGCCACCGCTGG
CGCCGCAACTGCCGACGGCGTCGCAATCGCAGTCGTTGCCGCTGCCGCCG
CCGCTGCTCTGACGCCAGTTTCGAGATCACGGCCGCCGCTGCCGCACAGG
CATTCGGGCCACACCGGGAGTGGCATCCAATCGGCGTCTGCCCGCAACGC
AGAGAGCCCCGGCTCCAGCAACACCGGCTGGAGGGCGAGCGCGCGGGCCG
GCCGCGCCGGCAGCTTTGGCGGCGCCAGCGCAGGCAACAGCGGCGGCGTC
GGGGCCGGTAGCTTTGGCGGAGGCATTTCCGGCGGCAACCCGGGCGCCGT
CAGCAGCCATCGAGGCGGCGGCAGTTACGGCGGCTACAGCAGCGGCGGCG
CCGCCAGCTACGCCAGCAGCGCCGACAGCGGTGATGAGTACGAGGACTGC
GTGTCGGTCTTGTCGTTCCCGGCAACGTCGCCGACGCCGTCGCCGCTGCC
GCCGTCGCCGCCCGCCCTGATGAAGAGGCAGCTATCTGAGGGGTCGAATA
CATCTGCGGGGGAGTTGTCGGAGCTCTATGAGTCCTGTGGGTCCGTCACG
GAGCCGCCAAGCCCAGTACCTGTTGGCCACGGCGCCGCCGGCACGGAGAC
TGCGGCAGCATGGTCGCCGTCTCCGTCGCTGTCGCCGCAGCCGCCTCCGC
TGCCGCCGCGTCGATCGACGGACTCTGCGTGCTCAATCTCGTCACTGCCG
CCGCGGCCGACGACTGAGTCCGGGCGGTCGCTCTCGCCGCTACCGCCGCT
GCCGCCGCGGCCTCCGCCCGTGACGGACTCCGACCGGTCGCTCTCGCCAT
TGCCGCCGCCGCGGGTGGGGCAGCAGGGCCTGGTGTCGTCGCAGCGGCGG
GAGCCCGGAGGGCCGCATCCGCCGCCATCGCCACCGCCTCGGCCGCCGCT
GCCGGCATACAAGCCGCTGGGCCCCGCGGCCTTTCAGAGCTACCGCGTCG
GCGGCCGTAGCCGCCGTCGGGCCAGCGGCGACAGCCGCGACGCCTTCTCG
AGCCTTCCCTCCTTGGCCCGCTGCAGCAGCGATGGCGGCGGCGCCAGCGG
CGCGTTCGGTGGCTCTACCGCCACTCGGGATGGCGGCAGCGGCACCGGCG
GCGGCAGTGGCGGTGGCGGCGGCGGCATTTGCAGCGCCGTG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig825:2..1792+

>mRNA_P-wetherbeei_contig825.1.1 ID=mRNA_P-wetherbeei_contig825.1.1|Name=mRNA_P-wetherbeei_contig825.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1791bp|location=Sequence derived from alignment at P-wetherbeei_contig825:2..1792+ (Phaeothamnion wetherbeei SAG_119_79)
TGGGGCGGTTGGACCGGCCGCAGCAGTCACCGCGGCGGCGGCGCCAGCGA
TTACGGTGGCGGCGGGAGCGGCGGCTACAACTCGGCGCCGGACTCGCCGC
GGGCAGCGCGAGCGGCGAAGCAGCGGAAGGCGAAGTGGGCATCACGGACG
GCGGAGGATGGCGCCTGGAAGTTCGCAGACAGCCGCTGGAAGTATGGCGG
GCGGTCTGGTTTCTTCGAGGACGACACGGAGGACGAGGACGAGCTGGAGG
CGTCGCTGGTGTACATTTGGGGCCCACCGCCGTCCTACCAGTCCATCTTT
GCGGCGGTACCCGAAGGCGGCGATGGCTCCGCCGACGGCAGCTGCTCGCC
TGCGGCAGCGGTGGCTCCGGCGACGGACGCGGTGCGGGCAACGGGCGCGA
GGATTGCAGCGGAAGCGACGGTGATGCCAAGGGCGAAGGCGGAGGCGACG
GGGGTGGAAACGACGGCGGGGACGGTGGCAGAACACCAGCCCGCTGCAGC
TGCCGAGCCATCTGCTACTGCTGCTGCGGCGGTGGCGCTGGCGAGGACTC
AGCCGCGCCTCGTGAAGGAGGCCGGCTCGTACGGGTCCTTCAGGGTCAAC
CGCGCGCTCTCGGAGGTTACTGCAGGAGCAGATGCGTCAGCCACCGCTGG
CGCCGCAACTGCCGACGGCGTCGCAATCGCAGTCGTTGCCGCTGCCGCCG
CCGCTGCTCTGACGCCAGTTTCGAGATCACGGCCGCCGCTGCCGCACAGG
CATTCGGGCCACACCGGGAGTGGCATCCAATCGGCGTCTGCCCGCAACGC
AGAGAGCCCCGGCTCCAGCAACACCGGCTGGAGGGCGAGCGCGCGGGCCG
GCCGCGCCGGCAGCTTTGGCGGCGCCAGCGCAGGCAACAGCGGCGGCGTC
GGGGCCGGTAGCTTTGGCGGAGGCATTTCCGGCGGCAACCCGGGCGCCGT
CAGCAGCCATCGAGGCGGCGGCAGTTACGGCGGCTACAGCAGCGGCGGCG
CCGCCAGCTACGCCAGCAGCGCCGACAGCGGTGATGAGTACGAGGACTGC
GTGTCGGTCTTGTCGTTCCCGGCAACGTCGCCGACGCCGTCGCCGCTGCC
GCCGTCGCCGCCCGCCCTGATGAAGAGGCAGCTATCTGAGGGGTCGAATA
CATCTGCGGGGGAGTTGTCGGAGCTCTATGAGTCCTGTGGGTCCGTCACG
GAGCCGCCAAGCCCAGTACCTGTTGGCCACGGCGCCGCCGGCACGGAGAC
TGCGGCAGCATGGTCGCCGTCTCCGTCGCTGTCGCCGCAGCCGCCTCCGC
TGCCGCCGCGTCGATCGACGGACTCTGCGTGCTCAATCTCGTCACTGCCG
CCGCGGCCGACGACTGAGTCCGGGCGGTCGCTCTCGCCGCTACCGCCGCT
GCCGCCGCGGCCTCCGCCCGTGACGGACTCCGACCGGTCGCTCTCGCCAT
TGCCGCCGCCGCGGGTGGGGCAGCAGGGCCTGGTGTCGTCGCAGCGGCGG
GAGCCCGGAGGGCCGCATCCGCCGCCATCGCCACCGCCTCGGCCGCCGCT
GCCGGCATACAAGCCGCTGGGCCCCGCGGCCTTTCAGAGCTACCGCGTCG
GCGGCCGTAGCCGCCGTCGGGCCAGCGGCGACAGCCGCGACGCCTTCTCG
AGCCTTCCCTCCTTGGCCCGCTGCAGCAGCGATGGCGGCGGCGCCAGCGG
CGCGTTCGGTGGCTCTACCGCCACTCGGGATGGCGGCAGCGGCACCGGCG
GCGGCAGTGGCGGTGGCGGCGGCGGCATTTGCAGCGCCGTG
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