mRNA_P-wetherbeei_contig8249.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig8249.1.1
Unique NamemRNA_P-wetherbeei_contig8249.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig8249.1.1 vs. uniprot
Match: D7FYT3_ECTSI (Dynein heavy chain n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYT3_ECTSI)

HSP 1 Score: 370 bits (950), Expect = 3.200e-114
Identity = 212/254 (83.46%), Postives = 232/254 (91.34%), Query Frame = 1
Query:    1 MVKVEEKKAATEDLLVEMGVQRADAEAQQAAATVEADKAGAASAAAAKIEREASEELAAAEPAMKAAADAVDCLSKSMLTELKSLPKPPAGVDKVTKAVLILVDKEFKNHAWDRAKKMMANVDQFKTSLVNFRGEDITEQEIEKVTPIVNDPEFTVENMKSKSAAAANLCTWVISIYTYNRIYVKVKPLMDALEAARRSKAEADASLKAANDSVAAVEAKLQQLQDRFMEATEEKAKVEAEAAACLNRLSLAER 762
            MVKVEEKKAATE LL EMGVQRA AE QQAAA++EADKA  ASA AA IE++A +ELA AEPAM AAA+AV+CLSK+MLTELKSLPKPPAGVDKVTKAVLILV+KE+KNHAWDRAKKMMANVDQFK SLV FRGEDITE EI+K+ PIV D  FTV+NMKSKSAAAANLC+WVISIYTYNRIYVKVKPLMD+LE AR++KA+ADASLK +ND VAAVEAKLQQLQD+FMEATEEKAKVEAEAAACL RLSLAER
Sbjct: 2987 MVKVEEKKAATEVLLEEMGVQRAGAEKQQAAASIEADKASVASAEAAAIEKDAEKELAQAEPAMLAAAEAVNCLSKAMLTELKSLPKPPAGVDKVTKAVLILVEKEYKNHAWDRAKKMMANVDQFKNSLVAFRGEDITEDEIKKLEPIVGDETFTVDNMKSKSAAAANLCSWVISIYTYNRIYVKVKPLMDSLEGARKAKADADASLKVSNDLVAAVEAKLQQLQDKFMEATEEKAKVEAEAAACLTRLSLAER 3240          
BLAST of mRNA_P-wetherbeei_contig8249.1.1 vs. uniprot
Match: A0A835YNN0_9STRA (Dynein heavy chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNN0_9STRA)

HSP 1 Score: 320 bits (821), Expect = 6.850e-97
Identity = 188/254 (74.02%), Postives = 209/254 (82.28%), Query Frame = 1
Query:    1 MVKVEEKKAATEDLLVEMGVQRADAEAQQAAATVEADKAGAASAAAAKIEREASEELAAAEPAMKAAADAVDCLSKSMLTELKSLPKPPAGVDKVTKAVLILVDKEFKNHAWDRAKKMMANVDQFKTSLVNFRGEDITEQEIEKVTPIVNDPEFTVENMKSKSAAAANLCTWVISIYTYNRIYVKVKPLMDALEAARRSKAEADASLKAANDSVAAVEAKLQQLQDRFMEATEEKAKVEAEAAACLNRLSLAER 762
            MVKVEEKKAAT++LLVEMGVQR DAE Q+AA                        EL+AAEPAMKAAA AVDCLSKSMLTELKSLPKPP GVDKVTKAVLILV+KEFK H WDRAKKMMANVD FK SLV FRGEDITE EI KV PI++DPEFTVENMK+KSAAAANLC+WVISIYT+NRIYVKVKPLMD+LE+AR SKA AD SL+ + ++VA VEA+L+QL+DRF EATE+KA+VEAEAAACL RL LAER
Sbjct: 3055 MVKVEEKKAATDELLVEMGVQREDAERQRAAXXXXXXXXXXXXXXXXXXXXXXXXELSAAEPAMKAAAAAVDCLSKSMLTELKSLPKPPQGVDKVTKAVLILVEKEFKTHTWDRAKKMMANVDAFKNSLVAFRGEDITENEIAKVEPILSDPEFTVENMKAKSAAAANLCSWVISIYTFNRIYVKVKPLMDSLESARASKAAADESLRISTEAVAGVEARLKQLEDRFTEATEDKARVEAEAAACLARLGLAER 3308          
BLAST of mRNA_P-wetherbeei_contig8249.1.1 vs. uniprot
Match: F0Y1J9_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y1J9_AURAN)

HSP 1 Score: 271 bits (694), Expect = 7.860e-80
Identity = 165/255 (64.71%), Postives = 196/255 (76.86%), Query Frame = 1
Query:    1 MVKVEEKKAATEDLLVEMGVQRADAEAQQAAATVEADKAGAASAAAAKIEREASEELAAAEPAMKAAADAVDCLSKSMLTELKSLPKPPAGVDKVTKAVLILVDKEFKNHA-WDRAKKMMANVDQFKTSLVNFRGEDITEQEIEKVTPIVNDPEFTVENMKSKSAAAANLCTWVISIYTYNRIYVKVKPLMDALEAARRSKAEADASLKAANDSVAAVEAKLQQLQDRFMEATEEKAKVEAEAAACLNRLSLAER 762
            MV VEEKK AT++LL EMGV RA AE ++  A VE +KA AAS +A +I+  A  ELA AEPAM+AAADAV+CL KSMLTELKSLPKPPAGV+KVT A LIL++ E++N   WDRAKKMMANVDQFK SL  + G  I E E++KV     DP+FT +NM+SKSAAAANLCTWV++IY +NRIYVKVKPLMDALEAA  SKA AD++L  A   VAAVEA+LQ+LQD+F         VEA+A ACL+RL LAER
Sbjct: 3208 MVTVEEKKLATDELLKEMGVSRAAAEKEKELANVEKEKATAASDSALEIKTSAEGELAEAEPAMRAAADAVECLDKSMLTELKSLPKPPAGVEKVTAACLILLEHEYRNMLKWDRAKKMMANVDQFKNSLKAYDGRTIPEDEVKKVEVFTLDPDFTPDNMRSKSAAAANLCTWVVNIYGFNRIYVKVKPLMDALEAANESKAAADSALATAEGKVAAVEAELQKLQDKFXXXXXXXXXVEAQAEACLDRLGLAER 3462          
BLAST of mRNA_P-wetherbeei_contig8249.1.1 vs. uniprot
Match: A0A7S3ZNI5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZNI5_9STRA)

HSP 1 Score: 259 bits (663), Expect = 1.100e-75
Identity = 158/255 (61.96%), Postives = 190/255 (74.51%), Query Frame = 1
Query:    1 MVKVEEKKAATEDLLVEMGVQRADAEAQQAAATVEADKAGAASAAAAKIEREASEELAAAEPAMKAAADAVDCLSKSMLTELKSLPKPPAGVDKVTKAVLILVDKEFKNHA-WDRAKKMMANVDQFKTSLVNFRGEDITEQEIEKVTPIVNDPEFTVENMKSKSAAAANLCTWVISIYTYNRIYVKVKPLMDALEAARRSKAEADASLKAANDSVAAVEAKLQQLQDRFMEATEEKAKVEAEAAACLNRLSLAER 762
            MV VEEKK+AT+ L++EMG+ R  AE + AAA +EA+KAG ASAAA +++  A  ELA AEPAM+AAADAV CL+K+ML ELKSLPKPPAGV+KVT   LIL++ E+K H  WDRAKKMM NVD F T+L  + G  + E EI K+   VNDPE TV+ MK KSAAAANL TWV++IY +NRIYVKVKPLMDAL+ A  SKA AD SL AA  +V   E +LQ LQD+F  AT EK +VE  A ACL +L LAER
Sbjct: 1226 MVMVEEKKSATDALIIEMGISRNIAEKEGAAANIEAEKAGVASAAALEVKTSAEAELAEAEPAMQAAADAVACLTKNMLGELKSLPKPPAGVEKVTACCLILLEHEYKQHLKWDRAKKMMGNVDAFMTTLQEYDGRTMPENEIPKIEVFVNDPEMTVDAMKKKSAAAANLWTWVVNIYGFNRIYVKVKPLMDALDEANASKAAADESLAAAQATVKRCEDELQALQDKFEAATAEKQEVEEMAEACLEKLGLAER 1480          
BLAST of mRNA_P-wetherbeei_contig8249.1.1 vs. uniprot
Match: A0A8J2SFN3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SFN3_9STRA)

HSP 1 Score: 259 bits (663), Expect = 1.140e-75
Identity = 158/255 (61.96%), Postives = 190/255 (74.51%), Query Frame = 1
Query:    1 MVKVEEKKAATEDLLVEMGVQRADAEAQQAAATVEADKAGAASAAAAKIEREASEELAAAEPAMKAAADAVDCLSKSMLTELKSLPKPPAGVDKVTKAVLILVDKEFKNHA-WDRAKKMMANVDQFKTSLVNFRGEDITEQEIEKVTPIVNDPEFTVENMKSKSAAAANLCTWVISIYTYNRIYVKVKPLMDALEAARRSKAEADASLKAANDSVAAVEAKLQQLQDRFMEATEEKAKVEAEAAACLNRLSLAER 762
            MV VEEKK+AT+ L++EMG+ R  AE + AAA +EA+KAG ASAAA +++  A  ELA AEPAM+AAADAV CL+K+ML ELKSLPKPPAGV+KVT   LIL++ E+K H  WDRAKKMM NVD F T+L  + G  + E EI K+   VNDPE TV+ MK KSAAAANL TWV++IY +NRIYVKVKPLMDAL+ A  SKA AD SL AA  +V   E +LQ LQD+F  AT EK +VE  A ACL +L LAER
Sbjct: 3008 MVMVEEKKSATDALIIEMGISRNIAEKEGAAANIEAEKAGVASAAALEVKTSAEAELAEAEPAMQAAADAVACLTKNMLGELKSLPKPPAGVEKVTACCLILLEHEYKQHLKWDRAKKMMGNVDAFMTTLQEYDGRTMPENEIPKIEVFVNDPEMTVDAMKKKSAAAANLWTWVVNIYGFNRIYVKVKPLMDALDEANASKAAADESLAAAQATVKRCEDELQALQDKFEAATAEKQEVEEMAEACLEKLGLAER 3262          
BLAST of mRNA_P-wetherbeei_contig8249.1.1 vs. uniprot
Match: A0A6A4AS25_9STRA (MT domain-containing protein (Fragment) n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4AS25_9STRA)

HSP 1 Score: 239 bits (609), Expect = 1.970e-75
Identity = 137/224 (61.16%), Postives = 173/224 (77.23%), Query Frame = 1
Query:    1 MVKVEEKKAATEDLLVEMGVQRADAEAQQAAATVEADKAGAASAAAAKIEREASEELAAAEPAMKAAADAVDCLSKSMLTELKSLPKPPAGVDKVTKAVLILVDKEFKNHAWDRAKKMMANVDQFKTSLVNFRGEDITEQEIEKVTPIVNDPEFTVENMKSKSAAAANLCTWVISIYTYNRIYVKVKPLMDALEAARRSKAEADASLKAANDSVAAVEAKLQQL 672
            MVKV EK+A+T+ LL +MG ++A AE QQ  AT E  KA AASAAAA++  EA +EL+ A+PAM AAA AVDCLSK+ +TELKSLPKPPAGVD VTKA LILV+KE+KNH WDRAKKMM N   F  +L  FRG DI E +I ++ P++ DPEFT E M SKS+AAAN+C+WV++IYT+NRIYV+VKPLMD+LEA+++ K EA+  L  A   VA V+ +L+ L
Sbjct:    1 MVKVAEKQASTDQLLEQMGREKAGAEVQQENATKEKLKAEAASAAAAELAAEAEKELSQAKPAMDAAAAAVDCLSKAAITELKSLPKPPAGVDNVTKACLILVEKEYKNHKWDRAKKMMNNAGAFLDALKEFRGGDIPEADIARIEPLIADPEFTAEKMASKSSAAANICSWVVNIYTFNRIYVRVKPLMDSLEASKKKKEEAEEQLARAMGQVAEVQKRLEAL 224          
BLAST of mRNA_P-wetherbeei_contig8249.1.1 vs. uniprot
Match: A0A2P4YI77_9STRA (Dynein heavy chain (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YI77_9STRA)

HSP 1 Score: 234 bits (598), Expect = 5.840e-74
Identity = 145/255 (56.86%), Postives = 183/255 (71.76%), Query Frame = 1
Query:    1 MVKVEEKKAATEDLLVEMGVQRADAEAQQAAATVEADKAGAASAAAAKIEREASEELAAAEPAMKAAADAVDCLSKSMLTELKSLPKPPAGVDKVTKAVLILVDKEFKNHAWDRAKKMMANVDQFKTSLVNFRGEDITEQEIEKVTPIVN-DPEFTVENMKSKSAAAANLCTWVISIYTYNRIYVKVKPLMDALEAARRSKAEADASLKAANDSVAAVEAKLQQLQDRFMEATEEKAKVEAEAAACLNRLSLAER 762
            M KVEE+K AT+ LL +MG QR DAE +Q  A  E  KA  A+  A++IE +AS ELA A+PA+ AA  AV+CL+K+ LTELKS+ KPPAGV+KVT AVL++V KE KN +WD AKKMMA VD FK SL  +  E+I  + + +V P++  DP F  E MKSKS AAANLC WV++I ++++++V+VKPLMD LE AR++K EAD  L A    VA VEA+L  LQ  F +AT EKAKVEAEA  C  RLSLAER
Sbjct:    1 MKKVEERKKATDLLLEQMGKQRGDAEVKQRRADEERAKAAQAAEIASQIEAQASVELAIAKPALDAAQQAVNCLNKASLTELKSMGKPPAGVEKVTAAVLMMVKKETKNFSWDNAKKMMAKVDVFKQSLEQYDKENIPPEVVARVEPLIQEDPNFNYEKMKSKSVAAANLCVWVVNIISFHQVFVRVKPLMDTLEKARQTKTEADIELAAVQKMVAEVEAQLNALQASFRDATNEKAKVEAEAQTCQERLSLAER 255          
BLAST of mRNA_P-wetherbeei_contig8249.1.1 vs. uniprot
Match: A0A7S3HP77_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HP77_9STRA)

HSP 1 Score: 253 bits (647), Expect = 1.510e-73
Identity = 157/251 (62.55%), Postives = 185/251 (73.71%), Query Frame = 1
Query:   10 VEEKKAATEDLLVEMGVQRADAEAQQAAATVEADKAGAASAAAAKIEREASEELAAAEPAMKAAADAVDCLSKSMLTELKSLPKPPAGVDKVTKAVLILVDKEFKNHAWDRAKKMMANVDQFKTSLVNFRGEDITEQEIEKVTPIVNDPEFTVENMKSKSAAAANLCTWVISIYTYNRIYVKVKPLMDALEAARRSKAEADASLKAANDSVAAVEAKLQQLQDRFMEATEEKAKVEAEAAACLNRLSLAER 762
            V EK+ AT  LL E+GVQRADA+ Q   A+ EA+KA  ASA AAKIE +A  ELA A+PAM+AA DAVDCLSK MLTELKSL  PP+GVD VT AVLIL++KE+KN  WDRAKKMMANVDQFK  L ++RGED+TE E++++ P ++  +F  + M+SKS AAANLC WV++I  YNRIYVKVKPLMD LE AR SKA A+ASL AA   VAAVEAKL            EKA VEA+AA    RL LAER
Sbjct: 1309 VAEKQIATNVLLEEIGVQRADADVQNELASAEAEKAAIASADAAKIELQAESELAEAKPAMEAAKDAVDCLSKGMLTELKSLSNPPSGVDNVTSAVLILIEKEYKNFKWDRAKKMMANVDQFKARLQSYRGEDMTEDEVKRLEPFLSKEDFDPKLMESKSMAAANLCNWVVNIVKYNRIYVKVKPLMDQLEEARASKAAAEASLAAAQTIVAAVEAKLXXXXXXXXXXXXEKAVVEAQAAYGKARLGLAER 1559          
BLAST of mRNA_P-wetherbeei_contig8249.1.1 vs. uniprot
Match: K3X373_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X373_GLOUD)

HSP 1 Score: 253 bits (646), Expect = 2.160e-73
Identity = 149/252 (59.13%), Postives = 188/252 (74.60%), Query Frame = 1
Query:    1 MVKVEEKKAATEDLLVEMGVQRADAEAQQAAATVEADKAGAASAAAAKIEREASEELAAAEPAMKAAADAVDCLSKSMLTELKSLPKPPAGVDKVTKAVLILVDKEFKNHAWDRAKKMMANVDQFKTSLVNFRGEDITEQEIEKVTPIVNDPEFTVENMKSKSAAAANLCTWVISIYTYNRIYVKVKPLMDALEAARRSKAEADASLKAANDSVAAVEAKLQQLQDRFMEATEEKAKVEAEAAACLNRLSLA 756
            M+KV EK+A+T+ LL +MG ++A AE QQ  A  E     AASAAAA++  EA +EL+ A+PAM AAA AVDCLSKS +TELKSLPKPPAGVD VTKA LILV+KE+KNH WDRAKKMM N   F  +L  FRGEDI E +I ++ P++ DPEFT E M SKS+AAAN+C+WV++IYT+NRIYV+VKPLMD+LEA+++ K EA+  L  A   VA V  +L+ L++   +ATEEK KVE    +C NRL LA
Sbjct: 3010 MIKVAEKQASTDLLLEQMGREKAGAEVQQEYANKEXXXXEAASAAAAELAAEAEKELSQAKPAMDAAAAAVDCLSKSAITELKSLPKPPAGVDNVTKACLILVEKEYKNHKWDRAKKMMNNAGAFLDALKEFRGEDIPEADIARIEPLIADPEFTAEKMASKSSAAANICSWVVNIYTFNRIYVRVKPLMDSLEASKKKKEEAEEQLARAMGQVAEVVKRLEVLENTLRQATEEKLKVEQMKESCENRLLLA 3261          
BLAST of mRNA_P-wetherbeei_contig8249.1.1 vs. uniprot
Match: A0A482RYG8_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RYG8_9ARCH)

HSP 1 Score: 251 bits (640), Expect = 1.380e-72
Identity = 153/251 (60.96%), Postives = 186/251 (74.10%), Query Frame = 1
Query:   10 VEEKKAATEDLLVEMGVQRADAEAQQAAATVEADKAGAASAAAAKIEREASEELAAAEPAMKAAADAVDCLSKSMLTELKSLPKPPAGVDKVTKAVLILVDKEFKNHAWDRAKKMMANVDQFKTSLVNFRGEDITEQEIEKVTPIVNDPEFTVENMKSKSAAAANLCTWVISIYTYNRIYVKVKPLMDALEAARRSKAEADASLKAANDSVAAVEAKLQQLQDRFMEATEEKAKVEAEAAACLNRLSLAER 762
            V EK+ AT  LL E+GVQRADA+ Q   A  EA KA  A+  AA+IE +A  ELA A+PAM+AA DAVDCLSK+MLTELKSL  PP+GVD VT A LIL++KE+KN  WDRAKKMMANVDQFK  L N+RGED+TE EI+++ P +++  F  + M+SKS AAANLC WV++I  +NRIYVKVKPLMD LE AR SKA A+           AV+AKL+ L D F EA++EKA+VEA+AAA   RLSLAER
Sbjct: 3096 VAEKQVATNQLLEEIGVQRADADVQNELANGEAAKASIATEEAARIETQAESELAMAKPAMEAAKDAVDCLSKNMLTELKSLSSPPSGVDLVTSACLILIEKEYKNFKWDRAKKMMANVDQFKQRLQNYRGEDMTEDEIKRLEPFLSNEAFDPKFMESKSMAAANLCNWVVNIVKFNRIYVKVKPLMDQLEQARASKAAAEXXXXXXXXXXXAVDAKLKILGDXFQEASDEKAEVEAQAAAGKTRLSLAER 3346          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8249.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYT3_ECTSI3.200e-11483.46Dynein heavy chain n=2 Tax=Ectocarpus TaxID=2879 R... [more]
A0A835YNN0_9STRA6.850e-9774.02Dynein heavy chain n=1 Tax=Tribonema minus TaxID=3... [more]
F0Y1J9_AURAN7.860e-8064.71Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S3ZNI5_9STRA1.100e-7561.96Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A8J2SFN3_9STRA1.140e-7561.96Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A6A4AS25_9STRA1.970e-7561.16MT domain-containing protein (Fragment) n=1 Tax=Ph... [more]
A0A2P4YI77_9STRA5.840e-7456.86Dynein heavy chain (Fragment) n=1 Tax=Phytophthora... [more]
A0A7S3HP77_9STRA1.510e-7362.55Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
K3X373_GLOUD2.160e-7359.13Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A482RYG8_9ARCH1.380e-7260.96Uncharacterized protein (Fragment) n=1 Tax=archaeo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8249contigP-wetherbeei_contig8249:298..1557 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FYT3
Preferred nameODA-DHCB
PFAMsAAA_5,AAA_6,AAA_7,AAA_8,AAA_9,DHC_N1,DHC_N2,Dynein_heavy,MT
Model size762
Max annot lvl2759|Eukaryota
KEGG koko:K10408
KEGG Pathwayko05016,map05016
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005623,GO:0005929,GO:0031514,GO:0042995,GO:0043226,GO:0044464,GO:0120025
Exons3
Evalue5.24e-115
EggNOG OGsCOG5245@1|root,KOG3595@2759|Eukaryota
Descriptiondynein light chain binding
Cds size762
COG categoryZ
BRITEko00000,ko00001,ko04812
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187029.160417-CDS-P-wetherbeei_contig8249:297..3481683187029.160417-CDS-P-wetherbeei_contig8249:297..348Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8249 298..348 -
1683187029.1832197-CDS-P-wetherbeei_contig8249:595..8741683187029.1832197-CDS-P-wetherbeei_contig8249:595..874Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8249 596..874 -
1683187029.2015762-CDS-P-wetherbeei_contig8249:1125..15571683187029.2015762-CDS-P-wetherbeei_contig8249:1125..1557Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8249 1126..1557 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8249.1.1prot_P-wetherbeei_contig8249.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig8249 298..1557 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig8249.1.1

>prot_P-wetherbeei_contig8249.1.1 ID=prot_P-wetherbeei_contig8249.1.1|Name=mRNA_P-wetherbeei_contig8249.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=254bp
MVKVEEKKAATEDLLVEMGVQRADAEAQQAAATVEADKAGAASAAAAKIE
REASEELAAAEPAMKAAADAVDCLSKSMLTELKSLPKPPAGVDKVTKAVL
ILVDKEFKNHAWDRAKKMMANVDQFKTSLVNFRGEDITEQEIEKVTPIVN
DPEFTVENMKSKSAAAANLCTWVISIYTYNRIYVKVKPLMDALEAARRSK
AEADASLKAANDSVAAVEAKLQQLQDRFMEATEEKAKVEAEAAACLNRLS
LAER
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mRNA from alignment at P-wetherbeei_contig8249:298..1557-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig8249.1.1 ID=mRNA_P-wetherbeei_contig8249.1.1|Name=mRNA_P-wetherbeei_contig8249.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1260bp|location=Sequence derived from alignment at P-wetherbeei_contig8249:298..1557- (Phaeothamnion wetherbeei SAG_119_79)
ATGGTCAAGGTGGAGGAAAAGAAGGCCGCCACAGAGGACCTCCTCGTCGA GATGGGCGTGCAGCGCGCCGACGCCGAGGCGCAGCAGGCCGCCGCCACCG TCGAGGCCGACAAGGCCGGTGCCGCCTCCGCCGCTGCCGCCAAGATCGAG CGCGAGGCCTCGGAGGAGCTGGCGGCGGCGGAGCCGGCCATGAAGGCGGC AGCAGATGCCGTGGACTGCCTGAGCAAGAGCATGCTGACGGAGCTCAAGT CGCTGCCGAAGCCACCGGCCGGCGTCGACAAGGTGACGAAGGCGGTGCTA ATCCTGGTGGACAAGGAGTTCAAGAACCACGCGTGGGACCGCGCCAAGAA GATGATGGCCAACGTGGACCAGTTCAAGACGAGCCTAGTCAACTTCCGCG GCGAGGACATTACCGAGCAGGAGATCGAAAAGGTCAGTCAGTTTGCTCTT AAGTCAGGTTTTCTTAACACCCAAAGTTTTGTTCCCCGCACAACGGGTCT TACGTTTCGAATTGTATGGTCTGGTATCGTTTGTGGCCGAGGAATGCGTG GCGTTGGGTCGGGACAAAGTGGGTCTCAGAACGCGCCTCTCCCGCTGTTT TCGTGTTTGAAGTCTTCCTTTCGAAAGGACTCATGCAAGAGCTTTCTGCC GCCTTGGCCGCCCGCGCTGTCCCACCGCAATAGGTGACGCCGATCGTGAA CGACCCCGAGTTCACGGTGGAGAACATGAAGTCCAAGTCGGCCGCCGCCG CCAACCTCTGCACCTGGGTCATCTCCATCTATACGTACAATCGCATCTAC GTCAAGGTGAAACCCCTGATGGACGCGCTCGAGGCAGCGCGGCGCAGCAA AGCAGAGGCGGACGCGTCGCTGAAGGCGGCGAACGACTCGGTGGCGGCTG TCGAGGCCAAGCTGCAGCAACTGCAGGATCGCTTCATGGAGGCCACCGAG GAGAAGGCCAAGGTGAGTGATCCGTTGAGACGGCACACTGCCTGACTAAC ACTGGACGAGAAGACTTGCTCATATGCTGTTAGTATTTGTGATGCGGTTA TTTTTGTAGCCTTTGAGAAGCGTTGTCTCATCCCTTGCCCCCACCTATCG CTTTATTCGCTCTCCTTTCCCACTTCTTCCTTTTCCATTTTTGTCGTTTC CTCATAGCTTGCGCCCGTGTCCGGTACCCTTCTCTATCACTGTTCTTTCA CGCCCGCAGGTGGAGGCTGAGGCGGCGGCGTGCCTCAATCGGCTGAGCCT CGCTGAGCGG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig8249:298..1557-

>mRNA_P-wetherbeei_contig8249.1.1 ID=mRNA_P-wetherbeei_contig8249.1.1|Name=mRNA_P-wetherbeei_contig8249.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=762bp|location=Sequence derived from alignment at P-wetherbeei_contig8249:298..1557- (Phaeothamnion wetherbeei SAG_119_79)
ATGGTCAAGGTGGAGGAAAAGAAGGCCGCCACAGAGGACCTCCTCGTCGA
GATGGGCGTGCAGCGCGCCGACGCCGAGGCGCAGCAGGCCGCCGCCACCG
TCGAGGCCGACAAGGCCGGTGCCGCCTCCGCCGCTGCCGCCAAGATCGAG
CGCGAGGCCTCGGAGGAGCTGGCGGCGGCGGAGCCGGCCATGAAGGCGGC
AGCAGATGCCGTGGACTGCCTGAGCAAGAGCATGCTGACGGAGCTCAAGT
CGCTGCCGAAGCCACCGGCCGGCGTCGACAAGGTGACGAAGGCGGTGCTA
ATCCTGGTGGACAAGGAGTTCAAGAACCACGCGTGGGACCGCGCCAAGAA
GATGATGGCCAACGTGGACCAGTTCAAGACGAGCCTAGTCAACTTCCGCG
GCGAGGACATTACCGAGCAGGAGATCGAAAAGGTGACGCCGATCGTGAAC
GACCCCGAGTTCACGGTGGAGAACATGAAGTCCAAGTCGGCCGCCGCCGC
CAACCTCTGCACCTGGGTCATCTCCATCTATACGTACAATCGCATCTACG
TCAAGGTGAAACCCCTGATGGACGCGCTCGAGGCAGCGCGGCGCAGCAAA
GCAGAGGCGGACGCGTCGCTGAAGGCGGCGAACGACTCGGTGGCGGCTGT
CGAGGCCAAGCTGCAGCAACTGCAGGATCGCTTCATGGAGGCCACCGAGG
AGAAGGCCAAGGTGGAGGCTGAGGCGGCGGCGTGCCTCAATCGGCTGAGC
CTCGCTGAGCGG
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