mRNA_P-wetherbeei_contig8223.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig8223.1.1
Unique NamemRNA_P-wetherbeei_contig8223.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8223.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8223contigP-wetherbeei_contig8223:1414..2345 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FW29
PFAMsAbhydrolase_5
Model size699
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue7.18e-07
EggNOG OGs2EWUG@1|root,2SYKF@2759|Eukaryota
DescriptionAlpha/beta hydrolase family
Cds size561
COG categoryS
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187027.5376408-UTR-P-wetherbeei_contig8223:1413..15501683187027.5376408-UTR-P-wetherbeei_contig8223:1413..1550Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig8223 1414..1550 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187027.5495265-CDS-P-wetherbeei_contig8223:1550..20251683187027.5495265-CDS-P-wetherbeei_contig8223:1550..2025Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8223 1551..2025 +
1683187027.558635-CDS-P-wetherbeei_contig8223:2259..23451683187027.558635-CDS-P-wetherbeei_contig8223:2259..2345Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8223 2260..2345 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8223.1.1prot_P-wetherbeei_contig8223.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig8223 1551..2345 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig8223.1.1

>prot_P-wetherbeei_contig8223.1.1 ID=prot_P-wetherbeei_contig8223.1.1|Name=mRNA_P-wetherbeei_contig8223.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=187bp
MATPSLLHCRPSNDAQWSDYMFNFLFLREALPSPYALQALYPMFDVCDDG
VAVDFHEDFLCCMPKAPSPAPPAAPAASPQSPLPPLCASPSQSSLPSPLP
SVSPLLPALHAASHRKIVDVRFIIVPGALVSPLAYAPVARALAGKGYPTY
IARLPFNLELWRPSWSRPPPVAEMAKKQAAAQQATGA
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mRNA from alignment at P-wetherbeei_contig8223:1414..2345+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig8223.1.1 ID=mRNA_P-wetherbeei_contig8223.1.1|Name=mRNA_P-wetherbeei_contig8223.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=932bp|location=Sequence derived from alignment at P-wetherbeei_contig8223:1414..2345+ (Phaeothamnion wetherbeei SAG_119_79)
TGCAAAGGCATGTTTAGATCGACTGCTTCACCGAGGGTATTTTGATGACA
AGACAAGAGAGCACACCTTGATGGAGTACGGCATTCAGGTACATTCATCC
AAATTTCGGTCGACTTCTGTCCCATCTGTTTAATCGTATGGCAACCCCGT
CCCTCTTACACTGCCGCCCGTCAAACGACGCGCAGTGGTCCGACTACATG
TTCAACTTTCTCTTTTTGCGCGAGGCGCTCCCCTCGCCCTACGCGCTCCA
AGCGCTCTACCCGATGTTTGATGTCTGCGACGATGGCGTCGCAGTCGATT
TCCACGAAGACTTCCTCTGCTGCATGCCGAAAGCTCCCTCGCCGGCACCA
CCAGCTGCACCGGCAGCATCGCCGCAGTCGCCGCTGCCGCCGTTGTGCGC
ATCACCTTCGCAGTCGTCGCTGCCGTCACCGCTGCCCTCGGTGTCGCCCC
TGCTGCCGGCCTTGCACGCGGCGTCGCATCGGAAAATCGTCGACGTCCGC
TTTATCATCGTCCCCGGAGCGCTCGTCAGCCCGCTGGCGTACGCCCCGGT
GGCCCGGGCGCTGGCGGGCAAGGGCTACCCGACCTACATTGCCCGGTTGC
CCTTCAACCTCGGTAAGCGTCCCAGGCCTCCTTTTTGGGGCAGCAAAGCG
TTGCCCAGGACAGTTTGGGGAGCCTGCTGATAGGCGCCACGTTCGCCAGC
ATTTTGCCTACTTCGCTTGGCAAGTCGCCACGCGTTGTTCATGCCGCGGT
GTAAGATTCTGGTCGCTATTGCTGCCCCTTTCGCCGCCTCGTCGTCCCCT
TTATTTGGCTCCTTTCCCCTCGCTTGAAAGGGTTTTGGGGAGCTAGAACT
GTGGAGGCCATCGTGGAGCAGGCCTCCTCCGGTGGCGGAGATGGCGAAGA
AACAAGCGGCGGCGCAGCAAGCAACCGGGGCA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig8223:1414..2345+

>mRNA_P-wetherbeei_contig8223.1.1 ID=mRNA_P-wetherbeei_contig8223.1.1|Name=mRNA_P-wetherbeei_contig8223.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=561bp|location=Sequence derived from alignment at P-wetherbeei_contig8223:1414..2345+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCAACCCCGTCCCTCTTACACTGCCGCCCGTCAAACGACGCGCAGTG
GTCCGACTACATGTTCAACTTTCTCTTTTTGCGCGAGGCGCTCCCCTCGC
CCTACGCGCTCCAAGCGCTCTACCCGATGTTTGATGTCTGCGACGATGGC
GTCGCAGTCGATTTCCACGAAGACTTCCTCTGCTGCATGCCGAAAGCTCC
CTCGCCGGCACCACCAGCTGCACCGGCAGCATCGCCGCAGTCGCCGCTGC
CGCCGTTGTGCGCATCACCTTCGCAGTCGTCGCTGCCGTCACCGCTGCCC
TCGGTGTCGCCCCTGCTGCCGGCCTTGCACGCGGCGTCGCATCGGAAAAT
CGTCGACGTCCGCTTTATCATCGTCCCCGGAGCGCTCGTCAGCCCGCTGG
CGTACGCCCCGGTGGCCCGGGCGCTGGCGGGCAAGGGCTACCCGACCTAC
ATTGCCCGGTTGCCCTTCAACCTCGAACTGTGGAGGCCATCGTGGAGCAG
GCCTCCTCCGGTGGCGGAGATGGCGAAGAAACAAGCGGCGGCGCAGCAAG
CAACCGGGGCA
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