mRNA_P-wetherbeei_contig8198.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig8198.1.2
Unique NamemRNA_P-wetherbeei_contig8198.1.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig8198.1.2 vs. uniprot
Match: A0A836CBT8_9STRA (Actin family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBT8_9STRA)

HSP 1 Score: 227 bits (579), Expect = 9.590e-67
Identity = 134/344 (38.95%), Postives = 171/344 (49.71%), Query Frame = 2
Query:  188 TIVIDNGGGTARAGFAGDDAPRSCVPNTCARLKNQLHTLVADETVGSVKDSSQLIFQRPFDRGYVVNWVSQMEVWRRLFGRQHLNVA-PADHSLLMTEAPFPPAALQTMTDEVVFEEFGFGAYYRCPAPALSVYYEQVQHCAAAADASIVSNCLCIRPQQLEDEREEALRAANAAVAVAGASTAAAYCSGVEPATLGESGGGASSXXXXXXXXXXXXXXXXXXXXXXXXXXXTGTGAEMAXXXXXXXXXXXXXXXDGFATSDAMVVVDSGFSFTHVIAFHQGRAVQHSAQRINVGGKLMTNYLKEAVSYRQWNMMDEFQLMDDVRQQLSFVSLDFSADLAAAGG 1216
            T+VIDNG G+ R G+AG+  PR  +PN  A++KNQ   L  DETV +V+D SQL++QRP DRGY++NW +++EVW+R+F   HLNV  P DH+LL TE PF P  L    +EVVFEE GF A YRCP  ALSVY EQV                                         GA++A  Y + + PA                                                                   DAMVVVD GFSFTHV  F++GRA+QH+  R+NVGGKL+TNYLKE +SYRQ N+MDEF L+    +   +V+ DF  D+ A  G
Sbjct:    3 TVVIDNGAGSVRGGWAGEPNPRHTMPNCTAKIKNQTVVLAGDETVDAVRDKSQLVYQRPHDRGYLINWENELEVWKRMFDASHLNVQNPQDHALLFTEPPFAPIMLAETANEVVFEELGFTACYRCPPAALSVYLEQV-----------------------------------------GANSAEVYSNALPPA-------------------------------------------------------------------DAMVVVDMGFSFTHVFCFYKGRALQHATVRLNVGGKLLTNYLKEVLSYRQLNVMDEFDLVTQAMESTCYVAQDFKHDMLATRG 238          
BLAST of mRNA_P-wetherbeei_contig8198.1.2 vs. uniprot
Match: D8LSR0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSR0_ECTSI)

HSP 1 Score: 199 bits (506), Expect = 9.940e-55
Identity = 176/366 (48.09%), Postives = 211/366 (57.65%), Query Frame = 2
Query:  179 MGRTIVIDNGGGTARAGFAGDDAPRSCVPNTCARLKNQLHTLVADETVGSVKDSSQLIFQRPFDRGYVVNWVSQMEVWRRLFGRQHLNVAPADHSLLMTEAPFPPAALQTMTDEVVFEEFG--FGAYYRCPAPALSVYYEQVQHCAAAADASIVSNCLCIRPQQLEDEREEALRAANAAVAVAGASTAAAYCSGVEPATLG--ESGGGASSXXXXXXXXXXXXXXXXXXXXXXXXXXXTGTGAEMAXXXXXXXXXXXXXXXD------------------GFATSDAMVVVDSGFSFTHVIAFHQGRAVQHSAQRINVGGKLMTNYLKEAVSYRQWNMMDEFQLMDDVRQQLSFVSLDFSADLAAA 1210
            M +T+V DNG G  +AG AG   P   +PN   R+K Q   +V DET  + +DS+ +   RPFDRGY+ NW  + EVWRR+ GR  LN  P D  LL TEAPF P  LQ   +EV+ EE      A  +     L+ +Y +    AAA               +    R   L   +  V V G +T   Y        +G   S G + SXXXXXXXXXXXXXXXXXXXXXXXXXXX        XXXXXXXXXXXXXXX                   G A SD  +VVDSGFSFTH++ F+QGRA+  SA R+NVGGKL+TNYLKE VSYRQWNMMDEF++M DV+  LS+VSLD  ADL AA
Sbjct:    1 MSKTLVFDNGAGGLKAGTAGQLRPSHTMPNCTGRIKGQAQMVVGDETAHAARDSAPISILRPFDRGYITNWEPEFEVWRRMLGRNFLNADPRDSRLLATEAPFGPLVLQEAANEVLEEERESILKAQMKKRRAELNAHYAREAREAAAKARXXXXXXXXXXXXKAAHGRGTRL---STGVLVGGGNTRQRYDPTDPEGVMGLAHSKGSSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGKGLAMSDVCIVVDSGFSFTHILPFYQGRALHKSALRVNVGGKLLTNYLKEVVSYRQWNMMDEFEVMQDVKDSLSYVSLDLDADLRAA 363          
BLAST of mRNA_P-wetherbeei_contig8198.1.2 vs. uniprot
Match: L8GW12_ACACA (Actinrelated protein Arp6, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GW12_ACACA)

HSP 1 Score: 162 bits (411), Expect = 4.770e-42
Identity = 104/338 (30.77%), Postives = 156/338 (46.15%), Query Frame = 2
Query:  191 IVIDNGGGTARAGFAGDDAPRSCVPNTCARLKNQLHTLVADETVGSVKDSSQLIFQRPFDRGYVVNWVSQMEVWRRLFGRQHLNVAPADHSLLMTEAPFPPAALQTMTDEVVFEEFGFGAYYRC-PAPALSVYYEQVQHCAAAADASIVSNCLCIRPQQLEDEREEALRAANAAVAVAGASTAAAYCSGVEPATLGESGGGASSXXXXXXXXXXXXXXXXXXXXXXXXXXXTGTGAEMAXXXXXXXXXXXXXXXDGFATSDAMVVVDSGFSFTHVIAFHQGRAVQHSAQRINVGGKLMTNYLKEAVSYRQWNMMDEFQLMDDVRQQLSFVSLDFSADL 1201
            +V+D GG   R GFA +D P   VPN   R K    T VADE +   +D S L  +RPF++GY+V++  Q E+W R FG+ +L + P DH L++T+  F P ALQ  T E+VFEE+GF + + C PA A+  YY++                   +P+ +                         +  G  P    ++                                                               A VVVDSG+SFTHV+ F +G  + ++ +RINVGGK++TN+LKE +S+R WNMM+E  L++ V++++ +VSLDF  D+
Sbjct:    3 VVVDGGGANLRFGFASEDQPSGVVPNQVVRPKRDRRTYVADE-IDQCRDISGLYLRRPFEKGYLVDFELQKEIWDRAFGKHYLKIQPKDHDLVLTQPLFTPLALQEATLELVFEEYGFKSLFCCSPATAVMHYYQK-------------------QPESM-------------------------HMLGKCPPLPADA-------------------------------------------------------------PSAAVVVDSGYSFTHVVPFFEGERLHNAVKRINVGGKVLTNHLKEIISFRTWNMMEETFLVNIVKEKMCYVSLDFIEDM 234          
BLAST of mRNA_P-wetherbeei_contig8198.1.2 vs. uniprot
Match: A0A1Y1IIG9_KLENI (Actin and related proteins n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IIG9_KLENI)

HSP 1 Score: 157 bits (396), Expect = 2.360e-39
Identity = 110/339 (32.45%), Postives = 150/339 (44.25%), Query Frame = 2
Query:  185 RTIVIDNGGGTARAGFAGDDAPRSCVPNTCARLKNQLHTLVADETVGSVKDSSQLIFQRPFDRGYVVNWVSQMEVWRRLFGRQHLNVAPADHSLLMTEAPFPPAALQTMTDEVVFEEFGFGAYYRCPAPALSVYYEQVQHCAAAADASIVSNCLCIRPQQLEDEREEALRAANAAVAVAGASTAAAYCSGVEPATLGESGGGASSXXXXXXXXXXXXXXXXXXXXXXXXXXXTGTGAEMAXXXXXXXXXXXXXXXDGFATSDAMVVVDSGFSFTHVIAFHQGRAVQHSAQRINVGGKLMTNYLKEAVSYRQWNMMDEFQLMDDVRQQLSFVSLDFSADL 1201
            R +V+DNG  + + GFAG+ APR  +PN   R K      VAD+ V S +D   L F+RPFDRGYVV+W +Q E+W R F    L V P++ SLL+TE PF   ++Q+  DE+VFEE+GF A +      LS      +H A +  AS ++                                                 GG+S                                                            +VVD GFSFTH +    G  V H+ +R+N+GGK +TNYLKE VSYR WNMM+E  +++DV+++L FVSLD   DL
Sbjct:   31 RVVVMDNGAASLKVGFAGEVAPRKEMPNCIVRGKGAKRQYVADQ-VESCEDIQSLTFRRPFDRGYVVSWETQKEIWDRAF-YTILKVKPSECSLLVTEPPFNLPSIQSSMDEMVFEEYGFRACHVALPAVLSH-----RHVATSEPASTLAR------------------------------------------------GGSS------------------------------------------------------------LVVDCGFSFTHTVPIFDGFPVSHAVRRLNLGGKALTNYLKELVSYRAWNMMEETAIIEDVKEKLCFVSLDIPGDL 254          
BLAST of mRNA_P-wetherbeei_contig8198.1.2 vs. uniprot
Match: A0A7S0SIB0_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SIB0_9CHLO)

HSP 1 Score: 151 bits (382), Expect = 3.650e-39
Identity = 102/337 (30.27%), Postives = 142/337 (42.14%), Query Frame = 2
Query:  191 IVIDNGGGTARAGFAGDDAPRSCVPNTCARLKNQLHTLVADETVGSVKDSSQLIFQRPFDRGYVVNWVSQMEVWRRLFGRQHLNVAPADHSLLMTEAPFPPAALQTMTDEVVFEEFGFGAYYRCPAPALSVYYEQVQHCAAAADASIVSNCLCIRPQQLEDEREEALRAANAAVAVAGASTAAAYCSGVEPATLGESGGGASSXXXXXXXXXXXXXXXXXXXXXXXXXXXTGTGAEMAXXXXXXXXXXXXXXXDGFATSDAMVVVDSGFSFTHVIAFHQGRAVQHSAQRINVGGKLMTNYLKEAVSYRQWNMMDEFQLMDDVRQQLSFVSLDFSADL 1201
            IV+DNGG T + GFAGDD P   VPN  A+ K    + V DE  G VKD S L  +RP DRGYVVNW  Q ++W  +F ++ L + P +  L++TEAPF   A+    D+V+F+ FGF +   C   +L                 +++N     P  L+                                                                                                A +   VV+D+GFSF H       R ++   +R+N+GGK +TNYLKE VSYRQWNMMDE+ LMDDV+++L +V +D   +L
Sbjct:    5 IVLDNGGATIKVGFAGDDQPMCVVPNCVAKPKGDKRSYVCDEIHG-VKDISSLNLRRPIDRGYVVNWDLQKDIWDHVF-KKVLKIKPKECHLVLTEAPFNLPAIMAEQDDVIFDHFGFKSALICNPASL-----------------VLANHFARHPDGLD------------------------------------------------------------------------------------------------ARARCGVVLDAGFSFAHATPIFDARVMRKGVRRVNLGGKALTNYLKELVSYRQWNMMDEYVLMDDVKEKLCYVVVDARIEL 226          
BLAST of mRNA_P-wetherbeei_contig8198.1.2 vs. uniprot
Match: A0A7S3TLJ4_EMIHU (Hypothetical protein n=4 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3TLJ4_EMIHU)

HSP 1 Score: 151 bits (381), Expect = 1.630e-37
Identity = 104/356 (29.21%), Postives = 151/356 (42.42%), Query Frame = 2
Query:  146 LNSCFPRPVSNMG---RTIVIDNGGGTARAGFAGDDAPRSCVPNTCARLKNQLHTLVADETVGSVKDSSQLIFQRPFDRGYVVNWVSQMEVWRRLFGRQHLNVAPADHSLLMTEAPFPPAALQTMTDEVVFEEFGFGAYYRCPAPALSVYYEQVQHCAAAADASIVSNCLCIRPQQLEDEREEALRAANAAVAVAGASTAAAYCSGVEPATLGESGGGASSXXXXXXXXXXXXXXXXXXXXXXXXXXXTGTGAEMAXXXXXXXXXXXXXXXDGFATSDAMVVVDSGFSFTHVIAFHQGRAVQHSAQRINVGGKLMTNYLKEAVSYRQWNMMDEFQLMDDVRQQLSFVSLDFSADLA 1204
            L+S    P +N+    + +VIDNGG T + GFAG   P  C+ N   + K     +   +   +  D S L ++   +RG +VNW +Q EVW R  G   L V PAD SLL++E P  P ++Q   DE+VFE FGF +Y   PAPAL+                     L I  QQ + +  EA  A                                                                                           A ++VD+GFS THV+      A+ +  +R+ +GGKL+TN+LK+ +SYR +N+M+E  L++DV+++L +VSLDF ADLA
Sbjct:    7 LHSMTANPPTNLPSHLKRVVIDNGGHTCKVGFAGQSDPERCLLNGVVKTKGPTGKVYVGDQYEACPDYSSLQYRLSLERGCLVNWDTQAEVWSRALGADVLAVNPADCSLLLSEIPMCPTSIQDTLDEMVFEHFGFHSYCTRPAPALAA--------------------LSIAAQQAKQQAPEASAA---------------------------------------------------------------------------------------PPMPASLIVDAGFSATHVVPIFGSAALNYGIKRLGLGGKLLTNHLKQVISYRAYNVMEETHLINDVKERLCYVSLDFDADLA 255          
BLAST of mRNA_P-wetherbeei_contig8198.1.2 vs. uniprot
Match: A0A7S0I6L6_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0I6L6_9EUKA)

HSP 1 Score: 149 bits (377), Expect = 4.420e-37
Identity = 102/339 (30.09%), Postives = 147/339 (43.36%), Query Frame = 2
Query:  188 TIVIDNGGGTARAGFAGDDAPRSCVPNTCARLKNQLHTLVADETVGSVKDSSQLIFQRPFDRGYVVNWVSQMEVWRRLFGRQHLNVAPADHSLLMTEAPFPPAALQTMTDEVVFEEFGFGAYYRCPAPALSVYYEQVQHCAAAADASIVSNCLCIRPQQLEDEREEALRAANAAVAVAGASTAAAYCSGVEPATLGESGGGASSXXXXXXXXXXXXXXXXXXXXXXXXXXXTGTGAEMAXXXXXXXXXXXXXXXDGFATSDAMVVVDSGFSFTHVIAFHQGRAVQHSAQRINVGGKLMTNYLKEAVSYRQWNMMDEFQLMDDVRQQLSFVSLDFSADLA 1204
            T+VIDNGG T + GFAG   P   +PN  A+ K +    +AD+ + + KD S L ++   +RG +VNW  Q +VW R FG + L ++PAD  +L++E P  P A+Q   DE+VFE FGF +Y   PAP L+                     L +R QQ                            S   PA+L                                                                     V+D+GFS  H +    G  V    +R+N+GGK+MTN+LK+ VSYR +N+MDE  L++D++++L +VSLDF A+LA
Sbjct:   12 TVVIDNGGHTCKVGFAGHAEPVRSMPNGIAKSKTEHKVFIADQ-LDACKDFSALQYRLSLERGCLVNWDVQSQVWGRAFGSEVLKISPADCRMLLSEIPLCPTAIQDTLDEMVFEHFGFHSYCTRPAPVLAA--------------------LALREQQA--------------------------ASPPHPASL---------------------------------------------------------------------VLDAGFSACHCVPIFGGNMVNFGVRRLNIGGKIMTNHLKQVVSYRAYNVMDETHLINDIKERLCYVSLDFGAELA 234          
BLAST of mRNA_P-wetherbeei_contig8198.1.2 vs. uniprot
Match: A0A7S0UQK4_9CHLO (Hypothetical protein n=1 Tax=Polytomella parva TaxID=51329 RepID=A0A7S0UQK4_9CHLO)

HSP 1 Score: 148 bits (374), Expect = 3.410e-36
Identity = 114/356 (32.02%), Postives = 160/356 (44.94%), Query Frame = 2
Query:  191 IVIDNGGGTARAGFAGDDAPRSCVPNTCARLKNQLHTLVADETVGSVKDSSQLIFQRPFDRGYVVNWVSQMEVWRRLFGRQHLN---VAPADHSLLMTEAPFPPAALQTMTDEVVFEEFGFGAYYRCPAPALSVYYEQVQHCAAAADASIVSNCLCIRPQQLEDEREEALRAANAAVAVAGASTAAAYCSGVEPATLGESGGGASSXXXXXXXXXXXXXXXXXXXXXXXXXXXTGTGAEMAXXXXXXXXXXXXXXXDGFATSDAMVVVDSGFSFTHVIAFHQGRAVQHSAQRINVGGKLMTNYLKEAVSYRQWNMMDEFQLMDDVRQQLSFVSLDFSADLAAAGGGPRAAAARRLN 1249
            + IDNGGG+ + G AG DAP    PN  A+ K +      D  + ++++ SQL  +RPFDRGY+VNW  + ++W R    + L    +   D  L +TE  F    +Q  T++VVFEEFGF + Y  PAP  S+          AA A              +DE E A    ++A          +Y   V+P  L E G                                   GAE+                     + A VV+D+GFSFTH++ F  G  +    +RINVGG+ MTN LKE VS+R  ++ DE  LMD V++++ FVS D   DL  A  G  A+   RL+
Sbjct:   10 LAIDNGGGSLKLGIAGCDAPLRTFPNCLAKPKGERQAAAGD-ALNALQEISQLSVKRPFDRGYLVNWELERDIWSRCLRTESLQSSQIQIQDCGLALTEPFFNFPQIQAATEQVVFEEFGFQSLYAAPAPVFSIRRALDLQTLGAAAAE-------------DDEPETATADVSSAFGSYLFPEDTSYHI-VDPIKLAELGS---------------------------------DGAELDDSFPHSGDRHPPSG----TKAGAGVVIDAGFSFTHIVPFFDGHVISGGVRRINVGGRAMTNLLKELVSFRALDVQDEHVLMDYVKERVCFVSADSDRDLLLASAGRAASHRFRLD 313          
BLAST of mRNA_P-wetherbeei_contig8198.1.2 vs. uniprot
Match: A0A250WT15_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WT15_9CHLO)

HSP 1 Score: 145 bits (365), Expect = 1.300e-35
Identity = 100/340 (29.41%), Postives = 145/340 (42.65%), Query Frame = 2
Query:  182 GRTIVIDNGGGTARAGFAGDDAPRSCVPNTCARLKNQLHTLVADETVGSVKDSSQLIFQRPFDRGYVVNWVSQMEVWRRLFGRQHLNVAPADHSLLMTEAPFPPAALQTMTDEVVFEEFGFGAYYRCPAPALSVYYEQVQHCAAAADASIVSNCLCIRPQQLEDEREEALRAANAAVAVAGASTAAAYCSGVEPATLGESGGGASSXXXXXXXXXXXXXXXXXXXXXXXXXXXTGTGAEMAXXXXXXXXXXXXXXXDGFATSDAMVVVDSGFSFTHVIAFHQGRAVQHSAQRINVGGKLMTNYLKEAVSYRQWNMMDEFQLMDDVRQQLSFVSLDFSADL 1201
            G  IVIDNG G  +AGF G+ +PRS  P+  A+ K +   ++ D  +    + SQL  +RP DRGY+VN+  + EVW R+F R  L + P +  LL++E  F    +Q+ T+++VFEEFGF A+Y  P P  ++                         +++ D                                                                      GTG                            V+VD+GFSF+H++ F  G+ +  + +R+N+GGK +TNYLKE VSYR  NMMDE  LM+ ++ QL FVS D  ADL
Sbjct:    8 GPIIVIDNGAGNIKAGFGGEASPRSVFPHCSAKAKGERQAMLGD-MLAEANEISQLTLKRPMDRGYLVNYDLEREVWGRVF-RSVLKINPRECGLLLSEPFFNFKPVQSATEQIVFEEFGFQAFYSAPGPTFAM-------------------------RRIAD------------------------------------------------------------LFPHIPANQVGTG----------------------------VIVDAGFSFSHIVPFFNGQLLLTAVKRVNIGGKALTNYLKELVSYRSLNMMDETYLMEHIKDQLCFVSQDVKADL 232          
BLAST of mRNA_P-wetherbeei_contig8198.1.2 vs. uniprot
Match: A0A3N4LQE6_9PEZI (Actin/actin-like protein n=1 Tax=Terfezia boudieri ATCC MYA-4762 TaxID=1051890 RepID=A0A3N4LQE6_9PEZI)

HSP 1 Score: 144 bits (363), Expect = 4.770e-35
Identity = 104/346 (30.06%), Postives = 152/346 (43.93%), Query Frame = 2
Query:  179 MGRTIVIDNGGGTARAGFAGDDA-PRSC--VPNTCARLKNQLHTLVADETVGSVKDSSQLIFQRPFDRGYVVNWVSQMEVWRRLF--GRQHLNVAPADHSLLMTEAPFPPAALQTMTDEVVFEEFGFGAYYRCPAPALSVYYEQVQHCAAAADASIVSNCLCIRPQQLEDEREEALRAANAAVAVAGASTAAAYCSGVEPATLGESGGGASSXXXXXXXXXXXXXXXXXXXXXXXXXXXTGTGAEMAXXXXXXXXXXXXXXXDGFATSDAMVVVDSGFSFTHVIAFHQGRAVQHSAQRINVGGKLMTNYLKEAVSYRQWNMMDEFQLMDDVRQQLSFVSLDFSADL 1201
            + +T+V+DNG  T +AGFA   A P SC  +PN  AR +++    V  E + S KD   + F+RP +RGY+VNW S+ E+W R F     HL   P   +L++TEAP  P+ LQT  D+++FEE+ FGAYYRC   +L  + +                                                           LG+  G   +                                                     A ++  +VVDSG SFTHVI   +G+    + +R++VGGK +TNY KE VS R +NM+DE  +M+++++ + FVS DFSADL
Sbjct:    5 LNQTLVVDNGAYTIKAGFAKQGAGPDSCSVIPNCIARGRDR-KVFVGTE-LDSCKDFGGMGFRRPVERGYLVNWESEKEIWDRAFLDTASHLACDPRKTTLVLTEAPNAPSTLQTNCDQIIFEEYEFGAYYRCIGASLVAWND-----------------------------------------------------------LGQDAGKPPT-----------------------------------------------------APAECAMVVDSGHSFTHVIPVIRGKVYHPAVRRVDVGGKFLTNYFKEMVSIRHYNMIDETHVMNEIKEAVCFVSTDFSADL 236          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8198.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CBT8_9STRA9.590e-6738.95Actin family n=1 Tax=Tribonema minus TaxID=303371 ... [more]
D8LSR0_ECTSI9.940e-5548.09Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
L8GW12_ACACA4.770e-4230.77Actinrelated protein Arp6, putative n=1 Tax=Acanth... [more]
A0A1Y1IIG9_KLENI2.360e-3932.45Actin and related proteins n=1 Tax=Klebsormidium n... [more]
A0A7S0SIB0_9CHLO3.650e-3930.27Hypothetical protein (Fragment) n=1 Tax=Mantoniell... [more]
A0A7S3TLJ4_EMIHU1.630e-3729.21Hypothetical protein n=4 Tax=Emiliania huxleyi Tax... [more]
A0A7S0I6L6_9EUKA4.420e-3730.09Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
A0A7S0UQK4_9CHLO3.410e-3632.02Hypothetical protein n=1 Tax=Polytomella parva Tax... [more]
A0A250WT15_9CHLO1.300e-3529.41Uncharacterized protein n=1 Tax=Chlamydomonas eust... [more]
A0A3N4LQE6_9PEZI4.770e-3530.06Actin/actin-like protein n=1 Tax=Terfezia boudieri... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8198contigP-wetherbeei_contig8198:24..2103 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LSR0
Preferred nameACTR6
PFAMsActin
Model size1253
Max annot lvl2759|Eukaryota
KEGG koko:K11662
Hectar predicted targeting categoryother localisation
GOsGO:0000228,GO:0000781,GO:0000784,GO:0000785,GO:0000790,GO:0000812,GO:0003674,GO:0003682,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005737,GO:0006325,GO:0006338,GO:0006342,GO:0006348,GO:0006355,GO:0006996,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016043,GO:0016458,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031491,GO:0031974,GO:0031981,GO:0032991,GO:0034399,GO:0034728,GO:0040029,GO:0043044,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043486,GO:0043933,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0044877,GO:0045814,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051276,GO:0060255,GO:0065007,GO:0070013,GO:0070603,GO:0070828,GO:0071824,GO:0071840,GO:0080090,GO:0097346,GO:0098687,GO:1902494,GO:1902679,GO:1903506,GO:1903507,GO:1904949,GO:2000112,GO:2000113,GO:2001141
Exons4
Evalue4.31e-56
EggNOG OGsKOG0680@1|root,KOG0680@2759|Eukaryota
Ec32 ortholog descriptionActin-related protein
Ec32 orthologEc-15_002940.1
Descriptionchromatin remodeling
Cds size1074
COG categoryS
BRITEko00000,ko03036,ko04812
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187025.590193-CDS-P-wetherbeei_contig8198:23..1791683187025.590193-CDS-P-wetherbeei_contig8198:23..179Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8198 24..179 -
1683187025.603972-CDS-P-wetherbeei_contig8198:620..10861683187025.603972-CDS-P-wetherbeei_contig8198:620..1086Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8198 621..1086 -
1683187025.6126168-CDS-P-wetherbeei_contig8198:1290..15141683187025.6126168-CDS-P-wetherbeei_contig8198:1290..1514Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8198 1291..1514 -
1683187025.6207983-CDS-P-wetherbeei_contig8198:1697..19251683187025.6207983-CDS-P-wetherbeei_contig8198:1697..1925Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8198 1698..1925 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187025.6287642-UTR-P-wetherbeei_contig8198:1925..21031683187025.6287642-UTR-P-wetherbeei_contig8198:1925..2103Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig8198 1926..2103 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8198.1.2prot_P-wetherbeei_contig8198.1.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig8198 24..1925 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig8198.1.2

>prot_P-wetherbeei_contig8198.1.2 ID=prot_P-wetherbeei_contig8198.1.2|Name=mRNA_P-wetherbeei_contig8198.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=358bp
MGRTIVIDNGGGTARAGFAGDDAPRSCVPNTCARLKNQLHTLVADETVGS
VKDSSQLIFQRPFDRGYVVNWVSQMEVWRRLFGRQHLNVAPADHSLLMTE
APFPPAALQTMTDEVVFEEFGFGAYYRCPAPALSVYYEQVQHCAAAADAS
IVSNCLCIRPQQLEDEREEALRAANAAVAVAGASTAAAYCSGVEPATLGE
SGGGASSDGGASSGGAGGSNGKRPASAPPPSSASTGTGAEMAAAVGAGAA
AGAASGADGFATSDAMVVVDSGFSFTHVIAFHQGRAVQHSAQRINVGGKL
MTNYLKEAVSYRQWNMMDEFQLMDDVRQQLSFVSLDFSADLAAAGGGPRA
AAARRLNR
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mRNA from alignment at P-wetherbeei_contig8198:24..2103-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig8198.1.2 ID=mRNA_P-wetherbeei_contig8198.1.2|Name=mRNA_P-wetherbeei_contig8198.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2080bp|location=Sequence derived from alignment at P-wetherbeei_contig8198:24..2103- (Phaeothamnion wetherbeei SAG_119_79)
GCGGAGCCGATGAACGTCCGTAAAAAGGAAGAGAAGTCCCTAAAGACGCA ACGAGGGCATCTGTAAGCCCTCATTTCGTTGTAACGGTGGTTTGAGACCG TAAAAGCCAGAAAAACGGGGAGCTATCCTCTAAAAAACGTAGTATCTCAA CTCTTGTTTCCCTAGACCCGTCTCCAACATGGGCCGCACGATCGTCATCG ACAACGGGGGTGGCACTGCGCGAGCAGGCTTTGCCGGCGATGATGCGCCG CGGAGCTGCGTGCCAAATACATGTGCTCGGCTGAAGAATCAGCTTCACAC GCTCGTGGCCGATGAAACGGTGGGATCCGTCAAGGACTCCAGCCAGCTCA TCTTTCAGCGGCCCTTTGACAGAGGATACGTGGTCAACTGGGTATCACAG ATGGAGGTGAGACGAGTGGAGAAGAGAGCCTCGCAAAGTACTCCGGCGCG CTTTGGCGCTCTCTTTCTTATCTCCTGTGGCTTCGGGCGCACCGCACGCT AGCCAGTACTGGCAGTGCCCAAAGCAAAAAAGATTTGATCCCCAATTTCT GTCCTTCCTCTTTTTTCCCCTCCTTCCCCTTGATAGCAGGTGTGGCGGCG GCTGTTCGGGCGGCAGCATCTCAACGTGGCGCCCGCCGACCATTCGCTGC TGATGACGGAGGCGCCGTTTCCGCCGGCGGCGCTGCAGACGATGACGGAC GAGGTGGTCTTCGAGGAGTTTGGCTTCGGCGCCTACTACCGCTGCCCCGC CCCCGCCCTCAGCGTCTACTACGAGCAGGTGCAGCATTGCGCGGCGGCGG CGGACGCTTCTATGTAAAGCCGCGGCGACAAATCCCTCTCAATTCTTGCC TTTTCTATTTTTGTTCCGACCTTTGGAAGCAGGGGCATTGGCTTTGTTGG TCCGTGATCCCGTTGGCACCTGGAACTCGGTGGTCCGTGAGTGGAAGGAA TCGGAGGTTCTGTTCGTAGCGCAAACAGTGCGTCTTAACGGCGGTCTGCT CTTGTGATGTGCTCAAGAGTATCCAACTGTCTTTGCATTCGTCCGCAGCA ACTGGAAGACGAGAGAGAGGAGGCGCTGCGCGCTGCCAACGCCGCCGTTG CTGTCGCCGGTGCCTCCACCGCGGCAGCTTACTGCTCTGGAGTCGAACCG GCGACACTGGGCGAATCCGGCGGCGGCGCCAGCAGCGACGGTGGCGCCAG CAGCGGCGGTGCAGGCGGCAGCAACGGAAAGCGCCCCGCCTCGGCGCCGC CGCCATCATCGGCCTCCACGGGAACAGGAGCGGAAATGGCGGCGGCTGTT GGGGCGGGGGCGGCGGCGGGGGCCGCGTCCGGGGCGGACGGCTTCGCGAC GTCGGACGCGATGGTGGTGGTGGACTCTGGCTTTTCGTTCACGCACGTCA TTGCCTTCCACCAGGGCCGCGCCGTGCAGCATTCGGCGCAGCGCATCAAC GTTGGTGGGAAGCTCATGACCAACTACTTGAAGGTGCGGCATGCTGCAGC AGAGGGCTGCTTGGCCGGCCGGCAAGCGAAAGAAGGAGAAAATGACAGGA TTGGTTTGACACTGGTTGGATAGTTGCTTCTTGTTTGGTTGATGCCGCGA CTTTTCAGTCGTGTTTTCAGCCTTGGCTACTTGTCGCTTGAGGAGCGACG CAAAGCGCATTAGATACGGCGTTGTCCATGCCTTGCTTTTGCTTATTTGA TCATCGTCCTCATTTTGCATCGTGTTGGCGGTGGAGCATCGTAACCTGAC GCGGCATCGGCGGGTGATTACAATGTATGGCGGCTGTTACACCTTTCCCG TGCAAAATCACGGCTAGCTTGGGGTTGGTTGGTCGTTCACTTGGATGGTT GGCTGTTTCGGTTGGATTGTTTGACTGGTTCGGTTCTGACGCGGACTTCT AAAACGGACTTCTGAAACGGACAGGAGGCGGTGTCGTACCGGCAGTGGAA CATGATGGATGAGTTCCAGCTGATGGACGATGTCCGCCAGCAGCTGTCCT TTGTTTCACTCGACTTCAGCGCCGACCTGGCCGCCGCCGGCGGCGGACCC CGCGCCGCCGCCGCCCGCCGTCTCAACCGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig8198:24..2103-

>mRNA_P-wetherbeei_contig8198.1.2 ID=mRNA_P-wetherbeei_contig8198.1.2|Name=mRNA_P-wetherbeei_contig8198.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1074bp|location=Sequence derived from alignment at P-wetherbeei_contig8198:24..2103- (Phaeothamnion wetherbeei SAG_119_79)
ATGGGCCGCACGATCGTCATCGACAACGGGGGTGGCACTGCGCGAGCAGG
CTTTGCCGGCGATGATGCGCCGCGGAGCTGCGTGCCAAATACATGTGCTC
GGCTGAAGAATCAGCTTCACACGCTCGTGGCCGATGAAACGGTGGGATCC
GTCAAGGACTCCAGCCAGCTCATCTTTCAGCGGCCCTTTGACAGAGGATA
CGTGGTCAACTGGGTATCACAGATGGAGGTGTGGCGGCGGCTGTTCGGGC
GGCAGCATCTCAACGTGGCGCCCGCCGACCATTCGCTGCTGATGACGGAG
GCGCCGTTTCCGCCGGCGGCGCTGCAGACGATGACGGACGAGGTGGTCTT
CGAGGAGTTTGGCTTCGGCGCCTACTACCGCTGCCCCGCCCCCGCCCTCA
GCGTCTACTACGAGCAGGTGCAGCATTGCGCGGCGGCGGCGGACGCTTCT
ATAGTATCCAACTGTCTTTGCATTCGTCCGCAGCAACTGGAAGACGAGAG
AGAGGAGGCGCTGCGCGCTGCCAACGCCGCCGTTGCTGTCGCCGGTGCCT
CCACCGCGGCAGCTTACTGCTCTGGAGTCGAACCGGCGACACTGGGCGAA
TCCGGCGGCGGCGCCAGCAGCGACGGTGGCGCCAGCAGCGGCGGTGCAGG
CGGCAGCAACGGAAAGCGCCCCGCCTCGGCGCCGCCGCCATCATCGGCCT
CCACGGGAACAGGAGCGGAAATGGCGGCGGCTGTTGGGGCGGGGGCGGCG
GCGGGGGCCGCGTCCGGGGCGGACGGCTTCGCGACGTCGGACGCGATGGT
GGTGGTGGACTCTGGCTTTTCGTTCACGCACGTCATTGCCTTCCACCAGG
GCCGCGCCGTGCAGCATTCGGCGCAGCGCATCAACGTTGGTGGGAAGCTC
ATGACCAACTACTTGAAGGAGGCGGTGTCGTACCGGCAGTGGAACATGAT
GGATGAGTTCCAGCTGATGGACGATGTCCGCCAGCAGCTGTCCTTTGTTT
CACTCGACTTCAGCGCCGACCTGGCCGCCGCCGGCGGCGGACCCCGCGCC
GCCGCCGCCCGCCGTCTCAACCGC
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