mRNA_P-wetherbeei_contig818.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig818.1.1 vs. uniprot
Match: A0A7S4D4V8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D4V8_HETAK) HSP 1 Score: 89.4 bits (220), Expect = 1.030e-15 Identity = 45/103 (43.69%), Postives = 66/103 (64.08%), Query Frame = 1
Query: 742 KFLVLDPRSQAMLTWMLIIFVATVATAISTPLELAWYKADDGKWAADPFFLVFNSIIISIFFLDMIINFNMAYFDDDDGSLVVDRKKISINYLCFWFWLDLME 1050
K VLD RS A++ WMLI+F+ T+ TAI TP+E+A+++ W F+L N +I +F DM +NF + Y ++G++V + KI NYL FWFWLDL+
Sbjct: 22 KMFVLDHRSDAVVKWMLIVFMLTIYTAIMTPVEVAFFETKLNAW----FYL--NRVIDFMFLFDMAVNFCLTYEVGNNGAIVTSQHKIMRNYLSFWFWLDLIS 118
BLAST of mRNA_P-wetherbeei_contig818.1.1 vs. uniprot
Match: A0A7S4DBB3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DBB3_HETAK) HSP 1 Score: 72.8 bits (177), Expect = 1.060e-9 Identity = 34/94 (36.17%), Postives = 60/94 (63.83%), Query Frame = 1
Query: 766 SQAMLTWMLIIFVATVATAISTPLELAWYKAD-DGKWAADPFFLVFNSIIISIFFLDMIINFNMAYFDDDDGSLVVDRKKISINYLCFWFWLDL 1044
S+A++ W +I+ V ++ + + TP+ELA+ + DG + FN I+ IF D+I++FN+ + D + G L+ R+ I++NY+ FWFW+DL
Sbjct: 4 SKAIMKWSMIVMVLSIVSVVITPVELAFLEVKFDGIF-------FFNRILELIFLCDIILSFNLTFQDPETGELLAKRRSIALNYMRFWFWMDL 90
BLAST of mRNA_P-wetherbeei_contig818.1.1 vs. uniprot
Match: A0A835YZG9_9STRA (Ion_trans_2 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZG9_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 1.590e-8 Identity = 35/109 (32.11%), Postives = 61/109 (55.96%), Query Frame = 1
Query: 751 VLDPRSQAMLTWMLIIFVATVATAISTPLELAWYKADDGKWAADPFFLVFNSIIISIFFLDMIINFNMAYFDDDDGSLVVDRKKISINYLCFWFWLDLMERKSAFSVSG 1077
V DP S+ W ++ V T+ A + P++LAW A +++ N+I +F+LDM++ FN+A + D GS++ R++I+++YL WF LDL+ + G
Sbjct: 220 VFDPASRGFQWWSFVVLVVTLIVAFAIPIDLAWPLVAKSSAA----YVLANAIFYLVFWLDMLVQFNLAVWMAD-GSVIATRRRIALHYLLTWFSLDLISSMPWDLILG 323
BLAST of mRNA_P-wetherbeei_contig818.1.1 vs. uniprot
Match: A0DEB9_PARTE (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Paramecium tetraurelia TaxID=5888 RepID=A0DEB9_PARTE) HSP 1 Score: 67.0 bits (162), Expect = 7.920e-8 Identity = 42/119 (35.29%), Postives = 60/119 (50.42%), Query Frame = 1
Query: 730 FIRGKFLVLDPRSQAMLTWMLIIFVATVATAISTPLELAW-YKADDGKWAADPFFLVFNSIIISIFFLDMIINFNMAYFDDDDGSLVVDRKKISINYLCFWFWLD---LMERKSAFSVS 1074
F+ G V +P S + W LI + I PL L + + +G FL FN + F++DMI+NF +AY+ G ++ DRK I+INYL WFWLD ++ FSV
Sbjct: 68 FLWGLPKVSNPNSSFRIFWELISMIFIFIQMIQIPLVLTYSVELSEG-------FLAFNQFMDVFFYIDMILNFKLAYYHR--GEIIFDRKLIAINYLKLWFWLDFLAVLPYDQMFSVE 177
BLAST of mRNA_P-wetherbeei_contig818.1.1 vs. uniprot
Match: A0DP00_PARTE (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Paramecium tetraurelia TaxID=5888 RepID=A0DP00_PARTE) HSP 1 Score: 63.2 bits (152), Expect = 1.420e-6 Identity = 34/96 (35.42%), Postives = 54/96 (56.25%), Query Frame = 1
Query: 760 PRSQAMLTWMLIIFVATVATAISTPLELAWYKADDGKWAADPFFLVFNSIIISIFFLDMIINFNMAYFDDDDGSLVVDRKKISINYLCFWFWLDLM 1047
P S+ W ++ + + TA TP+ LA+ + + W + +FFLD++I FN AYF+++ G L+VDR++I+I YL WF DLM
Sbjct: 210 PDSKFKKYWQYVLMILLIYTAFITPIRLAFIEEFNVVW------FTLELTVDMLFFLDILITFNTAYFNEE-GVLIVDRQQIAIQYLRTWFIFDLM 298
BLAST of mRNA_P-wetherbeei_contig818.1.1 vs. uniprot
Match: F0YLM2_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YLM2_AURAN) HSP 1 Score: 63.2 bits (152), Expect = 1.590e-6 Identity = 38/106 (35.85%), Postives = 56/106 (52.83%), Query Frame = 1
Query: 751 VLDPRSQAMLTWMLIIFVATVATAISTPLELAWYKADDGKWAADP------FFLVFNSIIISIFFLDMIINFNMAYFDDDDGSLVVDRKKISINYLCFWFWLDLME 1050
+ DP + + W L + A + I TP E+A + AD G + P + N +I FF+D+++ FN AYFD+ G V DR I+ +YL WFWLDL+
Sbjct: 946 IFDPFTPYRVAWDLAMMGAILFVMIVTPFEMA-FIADPGTFIRLPAAPSSVWLWCMNRLIDFGFFVDLLLAFNTAYFDEASGHWVTDRYVIARSYLQAWFWLDLVS 1050
BLAST of mRNA_P-wetherbeei_contig818.1.1 vs. uniprot
Match: A0CUS7_PARTE (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Paramecium tetraurelia TaxID=5888 RepID=A0CUS7_PARTE) HSP 1 Score: 62.4 bits (150), Expect = 2.330e-6 Identity = 37/99 (37.37%), Postives = 50/99 (50.51%), Query Frame = 1
Query: 751 VLDPRSQAMLTWMLIIFVATVATAISTPLELAWYKADDGKWAADPFFLVFNSIIISIFFLDMIINFNMAYFDDDDGSLVVDRKKISINYLCFWFWLDLM 1047
V +P S L W LI + I PL L Y + F +FN + F++DM +NF AY+ G ++ DRKKI+INYL WFWLD +
Sbjct: 168 VSNPNSTFRLIWELISMIFIFVQMIQIPLVLT-YSVELSYG-----FQIFNQFMDVFFYIDMALNFKFAYYYR--GEIIYDRKKIAINYLKLWFWLDFL 258
BLAST of mRNA_P-wetherbeei_contig818.1.1 vs. uniprot
Match: A0A1R2C4X0_9CILI (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2C4X0_9CILI) HSP 1 Score: 61.2 bits (147), Expect = 4.470e-6 Identity = 43/126 (34.13%), Postives = 73/126 (57.94%), Query Frame = 1
Query: 709 RKKSTGMFIRGKFLVLDPRSQAMLTWMLIIFVATVATAISTPLELAWYKADDGKWAADPFFLVFNSIIISIFFL-DMIINFNMAYFDDDDGSLVVDRKKISINYLCFWFWLDLMERK--SAFSVSG 1077
+++ T M + FLV+ P ++ W +I+ +A V TA P +A+ + +W D +F + ++I+ I FL D I+N A+FD++ G+LVV+RKKI NYL WF +D++ + +SG
Sbjct: 79 KERETTMLEQTPFLVIHPDARLKKLWNVILALALVYTAAIMPYVMAFIETQ--QW--DVWFFI--ALIMDILFLGDFILNCTTAFFDNE-GNLVVNRKKIMGNYLRGWFCIDVVASFPFNFLEISG 197
BLAST of mRNA_P-wetherbeei_contig818.1.1 vs. uniprot
Match: A0A1R2BGY6_9CILI (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2BGY6_9CILI) HSP 1 Score: 60.5 bits (145), Expect = 7.910e-6 Identity = 34/98 (34.69%), Postives = 60/98 (61.22%), Query Frame = 1
Query: 751 VLDPRSQAMLTWMLIIFVATVATAISTPLELAWYKADDGKWAADPFFLVFNSIIISIFFLDMIINFNMAYFDDDDGSLVVDRKKISINYLCFWFWLDL 1044
+L P ++ + W +++ + + TA+ P L + DP+ ++ + I+ +FF+D+I+NFN AYFD + G L+ +RK+I+INYL WF LD+
Sbjct: 69 ILHPSTKFKVFWNIVMALLLLYTAVVMPYTLTFLDYT----MYDPWGII-DLILDLLFFIDIIVNFNSAYFDQE-GHLISNRKQITINYLRSWFLLDV 160
BLAST of mRNA_P-wetherbeei_contig818.1.1 vs. uniprot
Match: A0E6J6_PARTE (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Paramecium tetraurelia TaxID=5888 RepID=A0E6J6_PARTE) HSP 1 Score: 60.1 bits (144), Expect = 1.170e-5 Identity = 34/100 (34.00%), Postives = 50/100 (50.00%), Query Frame = 1
Query: 751 VLDPRSQAMLTWMLIIFVATVATAISTPLELAWYKADDGKWAADPFFLVFNSIIISIFFLDMIINFNMAYFDDDDGSLVVDRKKISINYLCFWFWLDLME 1050
V P + + W L + + PL++++ D FF FN I+IF LD++INFN +Y G + DRK I+ NYL WFW+DL+
Sbjct: 120 VFKPEDKFRILWDLFTMIVIFFAILILPLDISFTIESD-------FFDNFNIASITIFSLDILINFNTSY--QQKGQYIYDRKLIAKNYLMAWFWIDLLS 210 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig818.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig818.1.1 >prot_P-wetherbeei_contig818.1.1 ID=prot_P-wetherbeei_contig818.1.1|Name=mRNA_P-wetherbeei_contig818.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=213bp MLAQHGAFAAGRQGSHIQPGPGSQTTTHHHRNHDLPHATASEMPPFPSGNback to top mRNA from alignment at P-wetherbeei_contig818:1576..4143- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig818.1.1 ID=mRNA_P-wetherbeei_contig818.1.1|Name=mRNA_P-wetherbeei_contig818.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2568bp|location=Sequence derived from alignment at P-wetherbeei_contig818:1576..4143- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig818:1576..4143- >mRNA_P-wetherbeei_contig818.1.1 ID=mRNA_P-wetherbeei_contig818.1.1|Name=mRNA_P-wetherbeei_contig818.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=639bp|location=Sequence derived from alignment at P-wetherbeei_contig818:1576..4143- (Phaeothamnion wetherbeei SAG_119_79)back to top |