mRNA_P-wetherbeei_contig8115.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig8115.1.1
Unique NamemRNA_P-wetherbeei_contig8115.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig8115.1.1 vs. uniprot
Match: D8LBD6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBD6_ECTSI)

HSP 1 Score: 288 bits (736), Expect = 6.720e-92
Identity = 217/351 (61.82%), Postives = 259/351 (73.79%), Query Frame = 1
Query:   22 AAVEDRIVMLKRPAAGDEDGAGTKRVRLETAATLALVEHEGIERTSTLLAPTMQLSGHEAPVYSVEFDPTGQSLASASFDRTIFLWNVFGECENYNVLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAHAGVRKKTFKGHRGVVNGCAVSSGPSPALFSASDDCTAQQWDPRARRSVQAFAHDFQQVTAVAASPDGVRLFTGGVDDIVREWDVRRPNDVILQLEGHMDXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPFASGDRCEKVFHGLQHGAEKNLLRCSWSPSGLMTAGGSSDRAVHIFDEPSAQELYFLPGHAGSVNDVVFHPSEPIIASCSSDKQIFLGEL 1074
            A VEDRIV+ KR   G EDG   KR+R+ET A LA+VE + I R+STLLAPTM L+GH+A VY+++FDPTG  LASA  DR IFLW+  GEC NYNVL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A+AG RKKTFKGH GVVN C++S   +  + SASDD   + WDPR RRSV  F + +Q VTAV  S D  ++ +GG+D+ ++ +DVR+  D+   + GH D XXXXXXXXXXXXXXXXXXXXXXXXXXX PFA+ +R EK FHG++HG EKNLL+C+W                   DEPS QELYFLPGH GSVN++ FHP+E II SC SDK I+LGE+
Sbjct:    2 AEVEDRIVISKRKGDG-EDGGQEKRLRVETQAALAIVEKQNIARSSTLLAPTMLLTGHQAAVYTLKFDPTGLQLASAGADRAIFLWDTRGECANYNVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANAGKRKKTFKGHSGVVNSCSISRTGN-LMASASDDGFVKLWDPRVRRSVAEFMNQYQ-VTAVCLSRDDQQVMSGGIDNEIKVFDVRKL-DIAYTMTGHTDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXPFANQNRLEKTFHGIKHGGEKNLLKCAWXXXXXXXXXXXXXXXXXXXDEPSTQELYFLPGHTGSVNEMTFHPTESIIGSCGSDKNIYLGEI 348          
BLAST of mRNA_P-wetherbeei_contig8115.1.1 vs. uniprot
Match: A0A7S2XUZ9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUZ9_9STRA)

HSP 1 Score: 273 bits (699), Expect = 2.380e-86
Identity = 171/313 (54.63%), Postives = 204/313 (65.18%), Query Frame = 1
Query:  136 HEGIERTSTLLAPTMQLSGHEAPVYSVEFDPTGQSLASASFDRTIFLWNVFGECENYNVLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAHAGVRKKTFKGHRGVVNGCAVSSGPSPALFSASDDCTAQQWDPRARRSVQAFAHDFQQVTAVAASPDGVRLFTGGVDDIVREWDVRRPNDVILQLEGHMDXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPFASGDRCEKVFHGLQHGAEKNLLRCSWSPSGLMTAGGSSDRAVHIFDEPSAQELYFLPGHAGSVNDVVFHPSEPIIASCSSDKQIFLGEL 1074
            H   ERTS L++PTM L+GH+A VYS++FDP+GQ+LAS SFD+TI LW+V+GEC NYNVLR XXXXXXXXXXXXXXXXXXXXXXXXXXXXXD + G  KK  + H GVVN CA     +  + S SDD T   WD R R+    F  D+  V AV  S D  ++F  G+ ++V+ WDVR+   V L+LEGH                              RPF  G RC KV+ GLQH  E+ LLRC WSPSG   A GS+DR VH++DE + QELY LPGH GSVN+V FHP EPII SC SDK I+LGEL
Sbjct:   37 HPEFERTSNLMSPTMMLTGHQAAVYSLQFDPSGQNLASGSFDKTIMLWSVYGECTNYNVLRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPNTGKLKKKLQAHSGVVNSCAFGRRGNDMVASGSDDATLCVWDTRMRKPADVFECDYA-VLAVGISKDNDQVFAAGLGEVVQVWDVRK-GQVSLELEGHHHTITGMSLSPDGSYLLTNSMDNTLRQWDVRPFVQGSRCSKVYTGLQHNFEQTLLRCGWSPSGEQVASGSADRVVHVWDEMTTQELYHLPGHTGSVNEVSFHPKEPIIGSCGSDKVIYLGEL 347          
BLAST of mRNA_P-wetherbeei_contig8115.1.1 vs. uniprot
Match: B3RP89_TRIAD (Uncharacterized protein n=2 Tax=Trichoplax TaxID=10227 RepID=B3RP89_TRIAD)

HSP 1 Score: 258 bits (658), Expect = 7.650e-81
Identity = 182/299 (60.87%), Postives = 227/299 (75.92%), Query Frame = 1
Query:  178 MQLSGHEAPVYSVEFDPTGQSLASASFDRTIFLWNVFGECENYNVLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAHAGVRKKTFKGHRGVVNGCAVSSGPSPALFSASDDCTAQQWDPRARRSVQAFAHDFQQVTAVAASPDGVRLFTGGVDDIVREWDVRRPNDVILQLEGHMDXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPFASGDRCEKVFHGLQHGAEKNLLRCSWSPSGLMTAGGSSDRAVHIFDEPSAQELYFLPGHAGSVNDVVFHPSEPIIASCSSDKQIFLGEL 1074
            M L+GHE  +Y+ +F P G+ LASASF+R IFLWN++GECENY +L XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD  +G R K FKGH G+VN C  S   +  L + SDDCTA+ WD R R  V +F  ++Q VTAV+ +  G ++ +GG+D+++R WD+R+ N+++  + GH+D    XXXXXXXXXXXXXXXXXXXXXXXXRP+  GDRC K+F G QH  EKNLL+CSWSP G   A GS+DR V+++D  + + LY LPGH GSVNDV FHP EPI+ SC SDK+I+LGEL
Sbjct:    1 MLLTGHEGEIYTAKFHPDGEVLASASFERKIFLWNIYGECENYAILEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFESGQRTKKFKGHTGIVNSCHPSRRGTQMLVTGSDDCTAKLWDVRRREPVHSFQSNYQ-VTAVSFNDTGDQIISGGLDNVIRVWDLRK-NNIMYSMSGHLDTITSXXXXXXXXXXXXXXXXXXXXXXXXRPYVPGDRCLKIFTGAQHNFEKNLLKCSWSPDGKKIAAGSADRFVYVWDTATRRILYKLPGHDGSVNDVQFHPIEPIVMSCGSDKKIYLGEL 297          
BLAST of mRNA_P-wetherbeei_contig8115.1.1 vs. uniprot
Match: A0A7S0S261_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0S261_9CHLO)

HSP 1 Score: 257 bits (656), Expect = 9.240e-80
Identity = 187/331 (56.50%), Postives = 233/331 (70.39%), Query Frame = 1
Query:   88 TKRVRLE-TAATLALVEHEGIERTSTLLAPTMQLSGHEAPVYSVEFDPTGQSLASASFDRTIFLWNVFGECENYNVLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAHAGVRKKTFKGHRGVVNG-CAVSSGPSPALFSASDDCTAQQWDPRARRSVQAFAHDFQQVTAVAASPDGVRLFTGGVDDIVREWDVRRPNDVILQLEGHMDXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPFASGDRCEKVFHGLQHGAEKNLLRCSWSPSGLMTAGGSSDRAVHIFDEPSAQELYFLPGHAGSVNDVVFHPSEPIIASCSSDKQIFLGEL 1074
            TK+ +L+     +  V  +GI+RTS L APTMQL+GH   VYS+ F P G++LAS+SFD+ IFLW+V+GEC N+ VL+XXXXXXXXXXXXXXXXXXXXXXXXXXX   DA    + K +K H  VVN  C +  GP P + SASDDCTA+ WD R ++SV  F   FQ VTA A +  G +++TGG+D+ ++ WD+R  N V++ L+GH D         XXXXXXXXXXXXXXXXXXXRP+A  +RC K+F G  H  EK LLRC+WSP G     GSSDR V+I+D  + +  Y LPGH GSVN+ VFHP EP+IAS SSD+ IFLGEL
Sbjct:   28 TKKAKLDDNQIVVGSVTKDGIKRTSNLQAPTMQLTGHAGEVYSIRFSPDGKNLASSSFDKDIFLWHVYGECNNFAVLKXXXXXXXXXXXXXXXXXXXXXXXXXXXRGWDAVTNSQIKKYKEHEAVVNSVCPLRRGP-PLVVSASDDCTAKLWDMRTKKSVSTFNEKFQ-VTAAAFAEAGDQIYTGGLDNTIKVWDLRADN-VVMTLKGHSDTVTGMSLSPXXXXXXXXXXXXXXXXXXXRPYAPQNRCVKMFTGHMHSFEKLLLRCAWSPDGKQVTCGSSDRMVYIWDAATCKMQYKLPGHTGSVNECVFHPQEPVIASASSDRTIFLGEL 355          
BLAST of mRNA_P-wetherbeei_contig8115.1.1 vs. uniprot
Match: A0A6U6E5C0_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6E5C0_9STRA)

HSP 1 Score: 254 bits (650), Expect = 4.670e-79
Identity = 140/321 (43.61%), Postives = 175/321 (54.52%), Query Frame = 1
Query:  133 EHEGIE---RTSTLLAPTMQLSGHEAPVYSVEFDPTGQSLASASFDRTIFLWNVFGECENYNVLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAHAGVRKKTFKGHRGVVNGCAV---SSGPSPALF-SASDDCTAQQWDPRARRSVQAFAHDFQQVTAVAASPDGVRLFTGGVDDIVREWDVRRPNDVILQLEGHMDXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPFASGDRCEKVFHGLQHGAEKNLLRCSWSPSGLMTAGGSSDRAVHIFDEPSAQELYFLPGHAGSVNDVVFHPSEPIIASCSSDKQIFLGEL 1074
            EH+  +   RTS+L  PTM+L+GH   VY++ +DP G+ L S SFD T  LW+  G+CEN+NVLR                              D   G R K F GH GVVN   V    +G  P L  SASDDCTA+ WD R R  V    H +Q VTAVA S DG  ++TGG+D+ +  WD+RR  + I+ ++GH D                            RPFA G R  K F G  H AE+ LL C+WS  G M  GGS+DR VHI+DE S +ELY+LPGHAG VN VVFHP E +IAS SSDK +++GEL
Sbjct:   22 EHDAADAPIRTSSLSHPTMKLTGHNGSVYTLSYDPQGELLCSGSFDTTCLLWSAAGDCENFNVLRGHKNAVLDVAWSHDSERVVTASADKHLAWWDVSRGERVKRFVGHEGVVNAVDVVREGAGSFPGLVASASDDCTARLWDARRRGDVGQLEHGYQ-VTAVAYSSDGKTVYTGGIDNCIHAWDIRR-KERIMTMKGHTDTITCLSLSPKGTHLLSNSSDGTLRTWDIRPFAEGKRHRKTFEGGTHNAERGLLNCAWSADGTMVTGGSADRVVHIWDEYSTEELYYLPGHAGCVNSVVFHPKENVIASGSSDKTLYVGEL 340          
BLAST of mRNA_P-wetherbeei_contig8115.1.1 vs. uniprot
Match: A0A835ZD06_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD06_9STRA)

HSP 1 Score: 254 bits (650), Expect = 5.610e-79
Identity = 179/350 (51.14%), Postives = 217/350 (62.00%), Query Frame = 1
Query:   28 VEDRIVMLKRPAAGDEDGAGTKRVRLETAATLALVEHEGIERTSTLLAPTMQLSGHEAPVYSVEFDPTGQSLASASFDRTIFLWNVFGECE-NYNVLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAHAGVRKKTFKGHRGVVNGCAVSSGPSPALFSASDDCTAQQWDPRARRSVQAFAHDFQQVTAVAASPDGVRLFTGGVDDIVREWDVRRPNDVILQLEGHMDXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPFASGDRCEKVFHGLQHGAEKNLLRCSWSPSGLMTAGGSSDRAVHIFDEPSAQELYFLPGHAGSVNDVVFHPSEPIIASCSSDKQIFLGEL 1074
            VEDRI ++KR    D  GA  KR R++T A LA+V+ +GI+RTS L+APTM L+GHEA VYSV FDP G  LAS SFD+TI LW+VFGE   NYNVL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A  G RK+ +KGH  VVN  ++S      + + SDDCT + WD R RR V  F     QVTAV      + +F+GG+D+ +R WD+RR       +EGH D                            RPFA+ +RC K + G  HGA++NLL                       D+P+ QELY+LPGHAG+VNDV FHPSEPI+ASC SDK I+LGEL
Sbjct:    3 VEDRIAVIKRSREPDGYGAD-KRFRVDTQAALAVVQSQGIQRTSGLVAPTMLLTGHEAAVYSVAFDPKGAHLASGSFDKTIMLWDVFGEGSCNYNVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGKGTRKRLYKGHTKVVNSVSMSRTQKNLMATGSDDCTVRLWDARERREVMTFT-TLYQVTAVEMGLGDLVVFSGGIDNNIRVWDLRREAQAFA-MEGHRDTITGLALSPSGTSLLANSMDRTLCEWDVRPFAT-ERCLKTYRGATHGADRNLLXXXXXXXXXXXXXXXXXXXXXXXDQPTGQELYYLPGHAGTVNDVRFHPSEPIVASCGSDKHIYLGEL 348          
BLAST of mRNA_P-wetherbeei_contig8115.1.1 vs. uniprot
Match: A0A250XJ86_9CHLO (Uncharacterized protein n=2 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XJ86_9CHLO)

HSP 1 Score: 250 bits (639), Expect = 3.110e-77
Identity = 188/343 (54.81%), Postives = 231/343 (67.35%), Query Frame = 1
Query:   52 KRPAAGDEDGAGT-KRVRLETAATLALVEHEGIERTSTLLAPTMQLSGHEAPVYSVEFDPTGQSLASASFDRTIFLWNVFGECENYNVLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAHAGVRKKTFKGHRGVVNG-CAVSSGPSPALFSASDDCTAQQWDPRARRSVQAFAHDFQQVTAVAASPDGVRLFTGGVDDIVREWDVRRPNDVILQLEGHMDXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPFASGDRCEKVFHGLQHGAEKNLLRCSWSPSGLMTAGGSSDRAVHIFDEPSAQELYFLPGHAGSVNDVVFHPSEPIIASCSSDKQIFLGEL 1074
            + P    +DGA   K+ +L T   +  V  EGI+RTS L AP MQL+GH A +YS++F P G ++AS SFDR IFLW  +G+C NY +  XXXXXXXXXXXXXXXXXXXXXXXXXXXXX DAH G + K    H   VN  C +  GP P   S SDD T + WD R+RRSV  F   FQ VTAVA +  G ++++GG+D+ ++ WD+R+ ++  + L+GH D          XXXXXXXXXXXXXXXXXXRP+A  +RC K F G QH  E+  LRC WSP G     GSSDR+V+I+D  + + LY LPGH GSVN+ VFHP EPII SCSSDK IFLGEL
Sbjct:   13 EEPVGNVDDGAIVLKKQKLGTEIIVGTVTKEGIKRTSNLQAPIMQLTGHGAEIYSLKFSPDGHTIASGSFDRHIFLWKTYGDCPNYMMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWDAHTGDQVKKSTEHDSFVNSVCPIRRGP-PLFVSGSDDATIKVWDHRSRRSVVTFREKFQ-VTAVAFADAGDQVYSGGLDNSIKVWDLRKDDEPAMVLKGHGDTLTGIRVSPDXXXXXXXXXXXXXXXXXXRPYAPQNRCMKTFMGHQHTFERLQLRCDWSPDGQQVTAGSSDRSVYIWDVSTRKLLYKLPGHNGSVNEAVFHPKEPIIGSCSSDKTIFLGEL 353          
BLAST of mRNA_P-wetherbeei_contig8115.1.1 vs. uniprot
Match: A0A6U3U160_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3U160_9STRA)

HSP 1 Score: 250 bits (638), Expect = 4.530e-77
Identity = 173/346 (50.00%), Postives = 215/346 (62.14%), Query Frame = 1
Query:   70 DEDGAGTKRVRL----ETAATLAL----VEHEGIE-RTSTLLAPTMQLSGHEAPVYSVEFDPTGQSLASASFDRTIFLWNVFGECENYNVLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAHAGVRKKTFKGHRGVVNGC-AVSSGPSPALFSASDDCTAQQWDPRARRSVQAFAHDFQQVTAVAASPDGVRLFTGGVDDIVREWDVRRPNDVILQLEGHMDXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPFASGD-RCEKVFHGLQHGAEKNLLRCSWSPSGLMTAGGSSDRAVHIFDEPSAQELYFLPGHAGSVNDVVFHPSEPIIASCSSDKQIFLGEL 1074
            D D A TKR R+    +   TL      +E E I  RTS+L  PTM+L+GH+  VY++ +D  G+ L S SFD T  LW+  G C+N+NVL+                              DA +G R K F GH GVVN    V  G +P + SASDDCTA+ WD R R  V    H+FQ VT++A S DG  ++TGG+D+ +  WDVRR  + I+++ G   XXXXXXXXXXXXXXXXXXXXXXXXXXXXRPF +G+ R +K F G  H AEK LL CSWS  G M  GGS+DR VHI+D  S +ELY+LPGHAG VN V+FHP E +IAS SSDK I++GEL
Sbjct:   11 DNDAAPTKRARVSNDNDQEVTLYQPPPEIEEEEINIRTSSLAQPTMKLTGHKGSVYTLAYDTEGECLCSGSFDMTCLLWSAGGTCDNFNVLKGHKNAILDVKWFHDGEKIVTASADRNLGWWDATSGERIKRFMGHEGVVNAVDCVKEGHAPLVISASDDCTARLWDARVRGDVSVLEHEFQ-VTSIAYSLDGNTIYTGGIDNCITSWDVRR-KEKIMKMTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPFVTGNQRHDKTFVGGTHNAEKGLLNCSWSSDGSMVTGGSADRVVHIWDVLSTEELYYLPGHAGCVNSVIFHPKENVIASGSSDKSIYVGEL 354          
BLAST of mRNA_P-wetherbeei_contig8115.1.1 vs. uniprot
Match: A0A1D1Y1W1_9ARAE (U5 small nuclear ribonucleoprotein n=2 Tax=Araceae TaxID=4454 RepID=A0A1D1Y1W1_9ARAE)

HSP 1 Score: 248 bits (633), Expect = 2.070e-76
Identity = 184/311 (59.16%), Postives = 227/311 (72.99%), Query Frame = 1
Query:  142 GIERTSTLLAPTMQLSGHEAPVYSVEFDPTGQSLASASFDRTIFLWNVFGECENYNVLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAHAGVRKKTFKGHRGVVNGCAVSSGPSPALFSASDDCTAQQWDPRARRSVQAFAHDFQQVTAVAASPDGVRLFTGGVDDIVREWDVRRPNDVILQLEGHMDXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPFASGDRCEKVFHGLQHGAEKNLLRCSWSPSGLMTAGGSSDRAVHIFDEPSAQELYFLPGHAGSVNDVVFHPSEPIIASCSSDKQIFLGEL 1074
            G +RTS+L +P M L+GH++ +Y+V+F+PTG  +AS S D+ IFLWN +GEC+N+    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD   G + K    H  VVN C  S    P + S SDD T++ WD R R S+Q F  +  Q+TAV+ S    ++FTGGVDD+++ WD+RR  +V+ +L+GH D     XXXXXXXXXXXXXXXXXXXXXXXRP+A  +RC K+F G QH  EKNLLRCSWSP G     GS+DR V+I+D  S + LY LPGH GSVN+  FHPSEPII SCSSDKQI+LGE+
Sbjct:   41 GKQRTSSLESPIMLLTGHQSAIYTVKFNPTGAVIASGSHDKDIFLWNTYGECKNFMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVETGKQVKKMTDHIFVVNACCTSRRGPPLVASGSDDGTSKLWDLRQRGSIQNFGTE-HQITAVSFSDASDKIFTGGVDDVIKVWDLRRI-EVVDKLQGHSDMITGMXXXXXXXXXXXXXXXXXXXXXXXRPYAPENRCVKIFAGHQHNFEKNLLRCSWSPDGSKVTAGSADRMVYIWDTTSRRILYKLPGHNGSVNETAFHPSEPIIGSCSSDKQIYLGEI 349          
BLAST of mRNA_P-wetherbeei_contig8115.1.1 vs. uniprot
Match: A0A438GR81_VITVI (U5 small nuclear ribonucleoprotein 40 kDa protein n=7 Tax=Pentapetalae TaxID=1437201 RepID=A0A438GR81_VITVI)

HSP 1 Score: 242 bits (618), Expect = 3.180e-74
Identity = 168/311 (54.02%), Postives = 211/311 (67.85%), Query Frame = 1
Query:  142 GIERTSTLLAPTMQLSGHEAPVYSVEFDPTGQSLASASFDRTIFLWNVFGECENYNVLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAHAGVRKKTFKGHRGVVNGCAVSSGPSPALFSASDDCTAQQWDPRARRSVQAFAHDFQQVTAVAASPDGVRLFTGGVDDIVREWDVRRPNDVILQLEGHMDXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPFASGDRCEKVFHGLQHGAEKNLLRCSWSPSGLMTAGGSSDRAVHIFDEPSAQELYFLPGHAGSVNDVVFHPSEPIIASCSSDKQIFLGEL 1074
            G +RTS+L +P M L+GH++ +Y+++F+PTG  +AS S +R IFLW V G+C+N+    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD   G + K    H   VN C  S    P + S SDD TA+ WD R R ++Q F  D  Q+TAV+ S    ++FTGG+D+ V+ WD+RR N+V + L+GH D                XXXXXXXXXX  RP+A  +RC K+  G QH  EKNLL+CSWSP G     GSSDR V+I+D  S + LY LPGH GSVN+ VFHPSEPI+ SCSSDKQI+LGE+
Sbjct:   36 GKQRTSSLESPIMLLAGHQSAIYTMKFNPTGTVIASGSHEREIFLWYVHGDCKNFMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVETGKQIKKMAEHSSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFP-DKYQITAVSFSDASDKIFTGGIDNDVKVWDLRR-NEVTMTLQGHQDMITGMQLSPDGSYLLTXXXXXXXXXXDMRPYAPQNRCVKILEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYIWDTTSRRILYKLPGHTGSVNECVFHPSEPIVGSCSSDKQIYLGEI 344          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8115.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBD6_ECTSI6.720e-9261.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2XUZ9_9STRA2.380e-8654.63Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
B3RP89_TRIAD7.650e-8160.87Uncharacterized protein n=2 Tax=Trichoplax TaxID=1... [more]
A0A7S0S261_9CHLO9.240e-8056.50Hypothetical protein n=1 Tax=Chlamydomonas leiostr... [more]
A0A6U6E5C0_9STRA4.670e-7943.61Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A835ZD06_9STRA5.610e-7951.14WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A250XJ86_9CHLO3.110e-7754.81Uncharacterized protein n=2 Tax=Chlamydomonas eust... [more]
A0A6U3U160_9STRA4.530e-7750.00Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A1D1Y1W1_9ARAE2.070e-7659.16U5 small nuclear ribonucleoprotein n=2 Tax=Araceae... [more]
A0A438GR81_VITVI3.180e-7454.02U5 small nuclear ribonucleoprotein 40 kDa protein ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8115contigP-wetherbeei_contig8115:85..2477 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LBD6
Preferred nameSNRNP40
PFAMsWD40
Model size1077
Max annot lvl2759|Eukaryota
KEGG rclassRC00004,RC00740
KEGG koko:K01759,ko:K12857
KEGG ReactionR02530
KEGG Pathwayko00620,ko03040,map00620,map03040
KEGG ModuleM00354,M00355
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000122,GO:0000375,GO:0000377,GO:0000398,GO:0000429,GO:0000430,GO:0000433,GO:0000988,GO:0000989,GO:0001076,GO:0001191,GO:0001196,GO:0001198,GO:0003006,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005682,GO:0005684,GO:0005732,GO:0005737,GO:0005829,GO:0006139,GO:0006323,GO:0006325,GO:0006333,GO:0006338,GO:0006355,GO:0006357,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0006996,GO:0007154,GO:0007530,GO:0007531,GO:0007532,GO:0007584,GO:0008150,GO:0008152,GO:0008289,GO:0008380,GO:0009605,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0009991,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010565,GO:0010570,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0016043,GO:0016070,GO:0016071,GO:0016584,GO:0016604,GO:0016607,GO:0017053,GO:0019216,GO:0019217,GO:0019219,GO:0019222,GO:0019899,GO:0022414,GO:0022607,GO:0030154,GO:0030532,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031497,GO:0031667,GO:0031668,GO:0031669,GO:0031670,GO:0031974,GO:0031981,GO:0032502,GO:0032879,GO:0032991,GO:0034641,GO:0034728,GO:0035091,GO:0035950,GO:0035952,GO:0035953,GO:0035955,GO:0036033,GO:0040008,GO:0042221,GO:0042304,GO:0042393,GO:0042826,GO:0043044,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043486,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0044877,GO:0045013,GO:0045014,GO:0045165,GO:0045292,GO:0045892,GO:0045893,GO:0045894,GO:0045934,GO:0045935,GO:0045944,GO:0045990,GO:0046015,GO:0046483,GO:0046890,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051049,GO:0051051,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0051716,GO:0060255,GO:0061984,GO:0061985,GO:0061986,GO:0061987,GO:0062012,GO:0065007,GO:0070013,GO:0070784,GO:0070887,GO:0071007,GO:0071011,GO:0071013,GO:0071014,GO:0071103,GO:0071496,GO:0071704,GO:0071824,GO:0071840,GO:0072364,GO:0080025,GO:0080090,GO:0080134,GO:0080135,GO:0090087,GO:0090088,GO:0090089,GO:0090304,GO:0097159,GO:0097525,GO:0120114,GO:0140110,GO:1900428,GO:1901360,GO:1901363,GO:1901981,GO:1902494,GO:1902679,GO:1902680,GO:1902936,GO:1903506,GO:1903507,GO:1903508,GO:1990904,GO:2000112,GO:2000113,GO:2000217,GO:2000531,GO:2000877,GO:2000879,GO:2001020,GO:2001141
Exons4
Evalue1.1e-92
EggNOG OGsKOG0265@1|root,KOG0265@2759|Eukaryota
Ec32 ortholog descriptionWD40 repeat
Ec32 orthologEc-27_004330.1
EC4.4.1.5
DescriptionRNA splicing
Cds size1077
COG categoryK
BRITEko00000,ko00001,ko00002,ko01000,ko03041
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187021.6041653-CDS-P-wetherbeei_contig8115:84..3121683187021.6041653-CDS-P-wetherbeei_contig8115:84..312Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8115 85..312 -
1683187021.6145995-CDS-P-wetherbeei_contig8115:604..8681683187021.6145995-CDS-P-wetherbeei_contig8115:604..868Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8115 605..868 -
1683187021.6225674-CDS-P-wetherbeei_contig8115:1501..17561683187021.6225674-CDS-P-wetherbeei_contig8115:1501..1756Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8115 1502..1756 -
1683187021.630486-CDS-P-wetherbeei_contig8115:2147..24771683187021.630486-CDS-P-wetherbeei_contig8115:2147..2477Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8115 2148..2477 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8115.1.1prot_P-wetherbeei_contig8115.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig8115 85..2477 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig8115.1.1

>prot_P-wetherbeei_contig8115.1.1 ID=prot_P-wetherbeei_contig8115.1.1|Name=mRNA_P-wetherbeei_contig8115.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=359bp
MADDGAAAAVEDRIVMLKRPAAGDEDGAGTKRVRLETAATLALVEHEGIE
RTSTLLAPTMQLSGHEAPVYSVEFDPTGQSLASASFDRTIFLWNVFGECE
NYNVLRGHKNAVLQLHWASDGQHIVSVSADKTVAWWDAHAGVRKKTFKGH
RGVVNGCAVSSGPSPALFSASDDCTAQQWDPRARRSVQAFAHDFQQVTAV
AASPDGVRLFTGGVDDIVREWDVRRPNDVILQLEGHMDTVTGLALNPAGT
HVLSNAMDRTMREWDVRPFASGDRCEKVFHGLQHGAEKNLLRCSWSPSGL
MTAGGSSDRAVHIFDEPSAQELYFLPGHAGSVNDVVFHPSEPIIASCSSD
KQIFLGEL*
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mRNA from alignment at P-wetherbeei_contig8115:85..2477-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig8115.1.1 ID=mRNA_P-wetherbeei_contig8115.1.1|Name=mRNA_P-wetherbeei_contig8115.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2393bp|location=Sequence derived from alignment at P-wetherbeei_contig8115:85..2477- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCGGACGATGGAGCAGCAGCGGCGGTCGAGGATCGCATCGTGATGTT GAAGCGGCCGGCCGCCGGCGATGAGGACGGCGCCGGCACCAAGCGGGTTC GCCTCGAGACCGCTGCAACGCTGGCGCTCGTCGAGCACGAGGGGATCGAG CGAACGTCGACGCTGCTGGCACCGACGATGCAGCTGTCGGGCCATGAGGC GCCCGTCTATTCGGTGGAGTTCGACCCGACGGGGCAGAGTCTCGCGTCGG CGTCGTTCGACCGGACCATCTTCCTCTGGAATGTCTTTGGGGAGTGTGAG AACTACAACGTGCTCCGAGGGCACAAGAACGTGAGTTGCCTTTATCTTCG GCTCGCCGTTTCGCGTTGGCGGCCTTGGCATGGCGCGACATCGCATACGC TGTGCCTGGCTTTCCTTCTCTTCCCCTCTGTCTCATTCCAGTCGCTGTTG TCGCAAAGTATTGTAGCATGGAATCATATGCAAGTAGTCGTGCAAGCTGT TTCCTCCCTTTTAGCACCCCTCGCTTTCCTGTGTGACTGTGCTTGCCAGC GTCTTGCCGGAACCGCAACCTGTCATTTGGCTGCCTCCAGCACCGCCCCC CCCCCCCCGCCACCGCAGCTACTACCTCTCCATCCATCCGTCTGACATCT CTCCTTTCCTTCTCTCCCGCGCCCAACTTGTTTCTACCACAACAACCACA TTCTCTTTTCTACTTCCCCAGGCGGTCCTCCAGCTGCACTGGGCGTCGGA CGGCCAGCACATCGTCTCCGTCTCGGCGGACAAGACGGTTGCCTGGTGGG ACGCCCACGCCGGCGTCCGCAAGAAGACCTTCAAGGGCCACCGGGGGGTC GTCAACGGGTGCGCCGTCTCGTCCGGGCCGAGTCCGGCGCTCTTCTCCGC GTCCGACGACTGCACAGCGCAACAGTGGGACCCGCGGGCGCGACGGAGCG TACAAGCCTTCGCGCACGACTTCCAGGTGTGTGTCGGAAAGTAAATATGG AGGTGCTTGTTGAAGCCAGGAGACTGCTGGTGCAGCTTCATTTCTTCGAT TGCCTGGACTTGTCTTATTTTGGCCTTAAGCTCCAGCCGGGTTTGGCATT TCTTCGATTGCCTGGACTTGTCTTATTTTGGCCTAAAGCTCCAGCCGGGT TTGGCATTTCTTCGATTGCCTGGACTTGTCTTATTGTGGCCTAAAACTCC AGCCGGGTATGGCATCTAGCTAGGTTTGGCAAGAACTGAAAGCAAGCTTG TATGGCATCTAGCTAGGTTTGGCAAGAACTGAAAGCAAGCTTGTGCCCTT CAAATCCTCCATTCTGCCCTCACTCATTTCGGTTTCTCTGTGCTACGGTC GCGTCTCTGGCTGCGCTGCGCTCTGCACCATGGTGGATCCAATGCTGGCT GTTGCAATGGCGACGGTGCGGCTCCGGCAACAATTACACTTCCCTCTACC ACTGTACCCTGGACGGCTTATTTTGCCTTATCACTGCGACGGCGACCGCG GCCCTCTGGCGGCGACGGCGGCGCTGGCGGCGATGCCGCTTATAACGGCG GCGGCGGCATCGGCGGTGAACAAAAAACCGCAACCGGTGGCCTCGCTTTG CCGAGAGAGCAGGTGACGGCGGTGGCGGCATCTCCCGACGGCGTCCGCCT CTTCACCGGCGGCGTCGACGACATCGTGCGCGAGTGGGACGTCCGGAGGC CCAACGACGTGATACTGCAACTCGAAGGGCACATGGACACGGTGACGGGG CTGGCGCTGAACCCGGCGGGCACGCACGTGCTGTCCAACGCGATGGACCG CACGATGCGCGAGTGGGACGTGCGGCCGTTCGCGTCGGGGGACCGCTGCG AGAAGGTCTTCCACGGGCTGCAGGTGCGATTGCGTTTTTATTTCTTCCCT TTTCTTTCTTTATGTCGCGCTGCGTTTGAATCGTTGTGGGCGTGGCTGCT CGGTCGTTGGTGTTACGGCGGCTGTAAGACGGTGTTCCGGTCGTTATGGA GTGGCGTTACGGCAAGCAGTACGAAACCAACACGACCTTAGTAACCCGCC CGCGGATGCTGCCCCTCTCCCCATTTCGCAGCTCCCTTTCCTCACCCAAT TGCGCCACCCTTCGTCTCTCTCCGAACGACAACACCGATCAATAACAATG ACAACCTAACGGCAGCATGGCGCGGAAAAGAACCTGCTGCGGTGCTCCTG GTCCCCCAGCGGGCTCATGACGGCCGGCGGCTCGTCGGACCGCGCCGTGC ATATCTTCGATGAGCCATCGGCGCAGGAGCTCTACTTTTTGCCGGGCCAT GCCGGCTCTGTCAACGACGTTGTCTTCCACCCGAGCGAGCCCATCATTGC GTCTTGCAGCAGCGACAAGCAGATCTTCCTGGGAGAATTGTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig8115:85..2477-

>mRNA_P-wetherbeei_contig8115.1.1 ID=mRNA_P-wetherbeei_contig8115.1.1|Name=mRNA_P-wetherbeei_contig8115.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1077bp|location=Sequence derived from alignment at P-wetherbeei_contig8115:85..2477- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCGGACGATGGAGCAGCAGCGGCGGTCGAGGATCGCATCGTGATGTT
GAAGCGGCCGGCCGCCGGCGATGAGGACGGCGCCGGCACCAAGCGGGTTC
GCCTCGAGACCGCTGCAACGCTGGCGCTCGTCGAGCACGAGGGGATCGAG
CGAACGTCGACGCTGCTGGCACCGACGATGCAGCTGTCGGGCCATGAGGC
GCCCGTCTATTCGGTGGAGTTCGACCCGACGGGGCAGAGTCTCGCGTCGG
CGTCGTTCGACCGGACCATCTTCCTCTGGAATGTCTTTGGGGAGTGTGAG
AACTACAACGTGCTCCGAGGGCACAAGAACGCGGTCCTCCAGCTGCACTG
GGCGTCGGACGGCCAGCACATCGTCTCCGTCTCGGCGGACAAGACGGTTG
CCTGGTGGGACGCCCACGCCGGCGTCCGCAAGAAGACCTTCAAGGGCCAC
CGGGGGGTCGTCAACGGGTGCGCCGTCTCGTCCGGGCCGAGTCCGGCGCT
CTTCTCCGCGTCCGACGACTGCACAGCGCAACAGTGGGACCCGCGGGCGC
GACGGAGCGTACAAGCCTTCGCGCACGACTTCCAGCAGGTGACGGCGGTG
GCGGCATCTCCCGACGGCGTCCGCCTCTTCACCGGCGGCGTCGACGACAT
CGTGCGCGAGTGGGACGTCCGGAGGCCCAACGACGTGATACTGCAACTCG
AAGGGCACATGGACACGGTGACGGGGCTGGCGCTGAACCCGGCGGGCACG
CACGTGCTGTCCAACGCGATGGACCGCACGATGCGCGAGTGGGACGTGCG
GCCGTTCGCGTCGGGGGACCGCTGCGAGAAGGTCTTCCACGGGCTGCAGC
ATGGCGCGGAAAAGAACCTGCTGCGGTGCTCCTGGTCCCCCAGCGGGCTC
ATGACGGCCGGCGGCTCGTCGGACCGCGCCGTGCATATCTTCGATGAGCC
ATCGGCGCAGGAGCTCTACTTTTTGCCGGGCCATGCCGGCTCTGTCAACG
ACGTTGTCTTCCACCCGAGCGAGCCCATCATTGCGTCTTGCAGCAGCGAC
AAGCAGATCTTCCTGGGAGAATTGTGA
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