mRNA_P-wetherbeei_contig8108.1.3 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig8108.1.3
Unique NamemRNA_P-wetherbeei_contig8108.1.3
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig8108.1.3 vs. uniprot
Match: A0A835YLS0_9STRA (Alb3-like protein, thylakoidal inner membrane insertase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLS0_9STRA)

HSP 1 Score: 285 bits (730), Expect = 2.030e-89
Identity = 153/273 (56.04%), Postives = 200/273 (73.26%), Query Frame = 1
Query:    1 KEIQAKMASNPEAANKAIADLYQQEEINPLAGCLPTIAQIPIFISLYRALLNLAKEDKLAEPFLWLPSLEGPVYQAPPTETLRWLNSGWDGFTPPLGWHDTLCFLTIPIILVISQSISQQLMQPPQQKNQQSDTSQAVLKYLPLLIGWFSLNVPSGLGVYWIINNFLSTSVSVFIRNQISAEKGLPTTGFSMGNMMGGAEAPSVSSSSL-----RNTRDDAEEGATEKPKGFAVVSDDE---IEGEIVSADDKVAQPKVKAPKSGGSSKKKRR 795
            K+IQ ++A+NPEAANKAIADLY++EE+NPL+GCLP++AQIPIFISLYRALLNLAKE+KL E FLWLPSLEGPV+ APPTE+L W+ + W+   P LGWHDTLC+L+IP+ILVI+QSISQQL+ PP+++  ++DTSQA+LKYLPLLIGWFSLNVPSGLG+YWI+NN +ST+ SV IR Q+    GLP T  +   +   A A    +  L     ++  D A     E+ KGF   +  E   ++GEI++A+       VK  KS G  K+ ++
Sbjct:  162 KDIQKRLANNPEAANKAIADLYKEEEVNPLSGCLPSLAQIPIFISLYRALLNLAKENKLDEGFLWLPSLEGPVFGAPPTESLNWIKT-WENGVPALGWHDTLCYLSIPVILVITQSISQQLISPPKKEGAEADTSQAILKYLPLLIGWFSLNVPSGLGLYWIVNNIVSTAASVLIRQQL----GLPATAGATPGVTAEANATVAKAKVLDAEVVKSVSDMAPGTQLEEAKGFGSAAQSEGEDVQGEIIAANSS-----VKPKKSSGKKKRSKK 424          
BLAST of mRNA_P-wetherbeei_contig8108.1.3 vs. uniprot
Match: D8LUC7_ECTSI (Alb3 homolog, thylakoidal inner membrane insertase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LUC7_ECTSI)

HSP 1 Score: 258 bits (658), Expect = 2.260e-78
Identity = 141/257 (54.86%), Postives = 179/257 (69.65%), Query Frame = 1
Query:    1 KEIQAKMASNPEAANKAIADLYQQEEINPLAGCLPTIAQIPIFISLYRALLNLAKEDKLAEPFLWLPSLEGPVYQAPPTETLRWLNSGWDGFTPPLGWHDTLCFLTIPIILVISQSISQQLMQPPQQKNQQSDTSQA----VLKYLPLLIGWFSLNVPSGLGVYWIINNFLSTSVSVFIRNQISAEKGLPTTGFSMGNMMGGAEAPSVSSSSL-RNTRDDAEEGATEKPKGFA---VVSDDEIEGEIVSADDKVAQP 747
            KE+QA+ A+NPEAAN+A+  LYQ E +NPLAGCLP +AQIPIFISLYR+LLNLAKE+KL E FLW+PSLEGP + +PPTE + W+    DG  P LGWHDT+ ++TIPIILVI+QSIS ++MQP +  +Q  D SQA    ++K+LPL+IGWFSL+VPS LG+YWI+NNF+ST+ SVFIRNQI+ E G P        +    E P V +  + R    D+     E+ KGF       D E+EGEIV  D   A P
Sbjct:  173 KELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTEMMSWIKDWSDG-APKLGWHDTIAYMTIPIILVITQSISTRIMQPAKDPSQPVDESQAASQNIVKFLPLMIGWFSLSVPSALGLYWILNNFISTATSVFIRNQIADETGDPNMKAPKITLPFMEEEPEVVTMPIPREALPDS--AVVEETKGFVPTPATLDAEVEGEIVKEDGAPAPP 426          
BLAST of mRNA_P-wetherbeei_contig8108.1.3 vs. uniprot
Match: A0A7S2XXH5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXH5_9STRA)

HSP 1 Score: 232 bits (592), Expect = 1.880e-68
Identity = 112/184 (60.87%), Postives = 144/184 (78.26%), Query Frame = 1
Query:    1 KEIQAKMA-SNPEAANKAIADLYQQEEINPLAGCLPTIAQIPIFISLYRALLNLAKEDKLAEPFLWLPSLEGPVYQAPPTETLRWLNSGWDGFTPPLGWHDTLCFLTIPIILVISQSISQQLMQPPQQKNQQS--DTSQAVLKYLPLLIGWFSLNVPSGLGVYWIINNFLSTSVSVFIRNQISA 543
            KEIQAK+  +NPE AN+ IADLYQ+E++NPLAGC+P + QIPIFISLYRALLNLA E+KL E FLWLPSL+GP Y A P + + WL +GW+   PPLGW DTL FLT+P+ILVISQ IS Q+MQP  +  +    + +Q + K LPL+IG+FSLNVPSGL +YW+ NNFL+T +++F+R Q+ A
Sbjct:  162 KEIQAKVGQTNPERANQLIADLYQKEQVNPLAGCVPALVQIPIFISLYRALLNLAAEEKLNEAFLWLPSLDGPTYGASPADGMNWLKTGWEDGVPPLGWPDTLAFLTLPVILVISQYISTQIMQPKVKPGEPDPMEQNQLLFKVLPLMIGYFSLNVPSGLAIYWVANNFLTTGLTLFVRKQVEA 345          
BLAST of mRNA_P-wetherbeei_contig8108.1.3 vs. uniprot
Match: A0A7S2FBB2_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FBB2_9STRA)

HSP 1 Score: 231 bits (589), Expect = 1.880e-68
Identity = 111/186 (59.68%), Postives = 143/186 (76.88%), Query Frame = 1
Query:    1 KEIQAKMASNPEAANKAIADLYQQEEINPLAGCLPTIAQIPIFISLYRALLNLAKEDKLAEPFLWLPSLEGPVYQAPPTETLRWLNSGWDGFTPPLGWHDTLCFLTIPIILVISQSISQQLMQPPQQKNQQSDTSQAVL----KYLPLLIGWFSLNVPSGLGVYWIINNFLSTSVSVFIRNQISAE 546
            K+IQAK  SNPE  N+ ++ LYQ   +NPLAGCLP I QIPIFI LYRALL LAK+D L EPFLWLP+LEGPVY A   +   WL   W  FTPPLGWHDTLCFL++P+ILVISQS SQ+L+ PP+ + Q+ D SQ  +    KYLP++ G+F+LNVPSGLGVYW+INNF++T +++F++ +++ E
Sbjct:  158 KDIQAKYKSNPEVMNREMSALYQDNSVNPLAGCLPAIVQIPIFIGLYRALLKLAKDDLLNEPFLWLPNLEGPVYGA---QNSDWLFQNWVDFTPPLGWHDTLCFLSLPVILVISQSYSQKLLTPPKPEGQKMDESQEAMQSTFKYLPIVFGFFALNVPSGLGVYWLINNFVTTGLNLFVKAKVAEE 340          
BLAST of mRNA_P-wetherbeei_contig8108.1.3 vs. uniprot
Match: W7U5Y4_9STRA (Membrane insertion protein, OxaA/YidC n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U5Y4_9STRA)

HSP 1 Score: 221 bits (564), Expect = 8.270e-65
Identity = 106/184 (57.61%), Postives = 137/184 (74.46%), Query Frame = 1
Query:    1 KEIQAKMASNPEAANKAIADLYQQEEINPLAGCLPTIAQIPIFISLYRALLNLAKEDKLAEPFLWLPSLEGPVYQAPPTETLRWLNSGWDGFTPPLGWHDTLCFLTIPIILVISQSISQQLMQPPQQKNQ-QSDTSQAVLKYLPLLIGWFSLNVPSGLGVYWIINNFLSTSVSVFIRNQISAEK 549
            KEIQAK  S+P    + +A LY    +NPLAGCLP + QIPIFISLYRAL NLA  ++L EPFLWLP+LEGP Y A P + + WL   W+GFTP LGWHDT+ FLT+P+IL++SQSISQQ++QP   K+   +  SQA+LK+LP ++G+FSLNVPSGLGVYWI NN ++T  +V +R  I  ++
Sbjct:  212 KEIQAKYKSDPTLQQQKMAQLYSDNNVNPLAGCLPALVQIPIFISLYRALTNLAAANELNEPFLWLPNLEGPTYGAGPADGMNWLKQ-WEGFTPSLGWHDTIAFLTVPLILIVSQSISQQILQPAANKDDPNAQQSQAILKFLPFMVGYFSLNVPSGLGVYWIANNLITTLTTVAVRAVIQGKE 394          
BLAST of mRNA_P-wetherbeei_contig8108.1.3 vs. uniprot
Match: A0A7S1FKR9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FKR9_9STRA)

HSP 1 Score: 221 bits (564), Expect = 1.160e-64
Identity = 118/228 (51.75%), Postives = 148/228 (64.91%), Query Frame = 1
Query:    1 KEIQAKMASNPEAANKAIADLYQQEEINPLAGCLPTIAQIPIFISLYRALLNLAKEDKLAEPFLWLPSLEGPVYQAPPTETLRWLNSGWDGFTPPLGWHDTLCFLTIPIILVISQSISQQLMQPPQQKNQQSDTSQ-AVLKYLPLLIGWFSLNVPSGLGVYWIINNFLSTSVSVFIRNQISAEKGLPTTGFSMGNMMGGAEAPSVSSSSLRNTRDDAEEGATEKPKGF 681
            K IQAK  SNPE  NK I+ +YQ  E+NPLAGCLP + QIP+FI LYRA+L+LAKEDKL +PFLWLP+LEGP Y A P     W+  GW    P LGW DT+ FL+IP+IL++ Q++S QLMQPP+  +  +D S   VLK LPLLIGWFSLNVPS LG+YWI N  +ST  +V I+N ++          SM      AE+P V+ S+   +         EKP GF
Sbjct:  199 KGIQAKYQSNPEEMNKRISAVYQDNEVNPLAGCLPALVQIPVFIGLYRAVLDLAKEDKLEQPFLWLPNLEGPTYGADPAHASDWILKGWHDGAPSLGWEDTIAFLSIPLILIVLQAVSTQLMQPPKNPDDPNDPSNNVVLKALPLLIGWFSLNVPSALGIYWITNTLVSTLSTVLIKNSLAG---------SMPAAAAAAESPVVTQSASVYSPP-----VREKPAGF 412          
BLAST of mRNA_P-wetherbeei_contig8108.1.3 vs. uniprot
Match: K8YSD2_NANGC (Preprotein translocase subunit YidC n=2 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YSD2_NANGC)

HSP 1 Score: 221 bits (564), Expect = 5.050e-64
Identity = 106/184 (57.61%), Postives = 137/184 (74.46%), Query Frame = 1
Query:    1 KEIQAKMASNPEAANKAIADLYQQEEINPLAGCLPTIAQIPIFISLYRALLNLAKEDKLAEPFLWLPSLEGPVYQAPPTETLRWLNSGWDGFTPPLGWHDTLCFLTIPIILVISQSISQQLMQPPQQKNQ-QSDTSQAVLKYLPLLIGWFSLNVPSGLGVYWIINNFLSTSVSVFIRNQISAEK 549
            KEIQAK  S+P    + +A LY    +NPLAGCLP + QIPIFISLYRAL NLA  ++L EPFLWLP+LEGP Y A P + + WL   W+GFTP LGWHDT+ FLT+P+IL++SQSISQQ++QP   K+   +  SQA+LK+LP ++G+FSLNVPSGLGVYWI NN ++T  +V +R  I  ++
Sbjct:  174 KEIQAKYKSDPTLQQQKMAQLYSDNNVNPLAGCLPALVQIPIFISLYRALTNLAAANELNEPFLWLPNLEGPTYGAGPADGMNWLKQ-WEGFTPSLGWHDTIAFLTVPLILIVSQSISQQILQPAANKDDPNAQQSQAILKFLPFMVGYFSLNVPSGLGVYWIANNLITTLTTVAVRAVIQGKE 356          
BLAST of mRNA_P-wetherbeei_contig8108.1.3 vs. uniprot
Match: A0A7S2EC37_9STRA (Hypothetical protein n=5 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EC37_9STRA)

HSP 1 Score: 221 bits (562), Expect = 6.770e-64
Identity = 104/179 (58.10%), Postives = 136/179 (75.98%), Query Frame = 1
Query:    1 KEIQAKMASNPEAANKAIADLYQQEEINPLAGCLPTIAQIPIFISLYRALLNLAKEDKLAEPFLWLPSLEGPVYQAPPTETLRWLNSGWDGFTPPLGWHDTLCFLTIPIILVISQSISQQLMQPPQQKNQQSDTSQAVLKYLPLLIGWFSLNVPSGLGVYWIINNFLSTSVSVFIRNQI 537
            KE+QAK  SNPE  N+ IA++YQ  E+NPLAGC+P+I QIP+FI LYRA+LNLAK D L EPFLWLP+LEGP Y A PT    WL   W   TP LGW +T+ FL IP+ILVISQ +S QLMQP  +  QQ   + A+LK+LPL+IG+FSL+VP+ LG+YW+ NNF++T++++ +RN +
Sbjct:  200 KEVQAKYQSNPEVMNQKIAEIYQTNEVNPLAGCIPSIVQIPVFIGLYRAVLNLAKADALDEPFLWLPNLEGPTYGADPTTGSDWLFKNWVDGTPSLGWDNTVAFLAIPVILVISQFVSMQLMQPKSEDPQQQQAN-AILKFLPLMIGYFSLSVPAALGIYWVTNNFVTTAITLSVRNSL 377          
BLAST of mRNA_P-wetherbeei_contig8108.1.3 vs. uniprot
Match: A0A1Z5JPG7_FISSO (YidC/Oxa1 family membrane protein insertase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JPG7_FISSO)

HSP 1 Score: 218 bits (554), Expect = 3.430e-63
Identity = 105/177 (59.32%), Postives = 133/177 (75.14%), Query Frame = 1
Query:    1 KEIQAKMASNPEAANKAIADLYQQEEINPLAGCLPTIAQIPIFISLYRALLNLAKEDKLAEPFLWLPSLEGPVYQAPPTETLRWLNSGWDGFTPPLGWHDTLCFLTIPIILVISQSISQQLMQPPQQKNQQSDTSQAVLKYLPLLIGWFSLNVPSGLGVYWIINNFLSTSVSVFIRN 531
            KE+QAK  SNPE  N+ IA+ YQ  +INPLAGCLP++AQIPIFI LYRA+L+LA+E+KL EPFLWLP+LEGP Y A PT    WL  GW    P LGW DT+ FL +P++LV+SQ +S +LMQP    + Q   S A+LK LPL+IGWFSLNVP+ L VYW +NN ++T +S+FIR+
Sbjct:  150 KELQAKYQSNPEVMNQKIAEFYQSNDINPLAGCLPSLAQIPIFIGLYRAVLDLAQENKLNEPFLWLPNLEGPTYGADPTSGSDWLFKGWTDGVPSLGWDDTISFLILPVLLVVSQYLSMELMQPKTTDSAQQQ-SNAILKVLPLMIGWFSLNVPAALCVYWFVNNVITTGLSLFIRS 325          
BLAST of mRNA_P-wetherbeei_contig8108.1.3 vs. uniprot
Match: A0A7S0CAS3_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CAS3_9STRA)

HSP 1 Score: 217 bits (552), Expect = 5.810e-63
Identity = 103/184 (55.98%), Postives = 137/184 (74.46%), Query Frame = 1
Query:    1 KEIQAKMASNPEAANKAIADLYQQEEINPLAGCLPTIAQIPIFISLYRALLNLAKEDKLAEPFLWLPSLEGPVYQAPPTETLRWLNSGWDGFTPPLGWHDTLCFLTIPIILVISQSISQQLMQPPQQKNQ-----QSDTSQAVLKYLPLLIGWFSLNVPSGLGVYWIINNFLSTSVSVFIRNQI 537
            KEIQAK ASNPE  N+ ++  Y+  E+NPLAGCLP++AQ+PIFI LYRA+LNLAK++ L E FLWLPSLEGP Y A P   L W+  GW    P LGW DTL F T+P++LVI+Q ISQQ+MQPP+ ++       +DT+  +LK+LP ++G+FSL VPS LG+YW+INN  +T+++V I+N I
Sbjct:  156 KEIQAKYASNPEVMNQKVSSFYKDNEVNPLAGCLPSLAQLPIFIGLYRAVLNLAKQNTLDESFLWLPSLEGPTYGADPAHGLDWVTQGWINGVPSLGWEDTLKFGTLPVLLVITQLISQQIMQPPKPESTGADDTAADTTNQILKFLPFMLGYFSLGVPSALGIYWVINNVATTALNVVIKNNI 339          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8108.1.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YLS0_9STRA2.030e-8956.04Alb3-like protein, thylakoidal inner membrane inse... [more]
D8LUC7_ECTSI2.260e-7854.86Alb3 homolog, thylakoidal inner membrane insertase... [more]
A0A7S2XXH5_9STRA1.880e-6860.87Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2FBB2_9STRA1.880e-6859.68Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
W7U5Y4_9STRA8.270e-6557.61Membrane insertion protein, OxaA/YidC n=1 Tax=Nann... [more]
A0A7S1FKR9_9STRA1.160e-6451.75Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]
K8YSD2_NANGC5.050e-6457.61Preprotein translocase subunit YidC n=2 Tax=Nannoc... [more]
A0A7S2EC37_9STRA6.770e-6458.10Hypothetical protein n=5 Tax=Ditylum brightwellii ... [more]
A0A1Z5JPG7_FISSO3.430e-6359.32YidC/Oxa1 family membrane protein insertase n=2 Ta... [more]
A0A7S0CAS3_9STRA5.810e-6355.98Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig8108contigP-wetherbeei_contig8108:2..2892 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LUC7
Preferred nameALB3.1
PFAMs60KD_IMP
Model size1191
Max annot lvl2759|Eukaryota
KEGG koko:K03217
KEGG TC2.A.9
KEGG Pathwayko02024,ko03060,ko03070,map02024,map03060,map03070
KEGG ModuleM00335
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006605,GO:0006612,GO:0006810,GO:0006886,GO:0006996,GO:0008104,GO:0008150,GO:0009507,GO:0009534,GO:0009535,GO:0009536,GO:0009579,GO:0009657,GO:0009658,GO:0009668,GO:0009987,GO:0010027,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0017038,GO:0019904,GO:0022607,GO:0031976,GO:0031984,GO:0032991,GO:0033036,GO:0033365,GO:0034357,GO:0034613,GO:0042651,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0044743,GO:0045036,GO:0045038,GO:0045184,GO:0046907,GO:0050789,GO:0050793,GO:0050794,GO:0051179,GO:0051234,GO:0051259,GO:0051291,GO:0051641,GO:0051649,GO:0055035,GO:0055085,GO:0061024,GO:0065002,GO:0065003,GO:0065007,GO:0070206,GO:0070208,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0072594,GO:0072596,GO:0072598,GO:0072657,GO:0090150,GO:0090342
Exons8
Evalue2.75e-78
EggNOG OGsCOG0706@1|root,KOG1239@2759|Eukaryota
Ec32 ortholog descriptionAlb3 homolog, thylakoidal inner membrane insertase
Ec32 orthologEc-14_004480.1
Descriptionmembrane insertase activity
Cds size789
COG categoryU
BRITEko00000,ko00001,ko00002,ko02044,ko03029
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig8108.1.3prot_P-wetherbeei_contig8108.1.3Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig8108 528..2874 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187020.9416559-UTR-P-wetherbeei_contig8108:1..1851683187020.9416559-UTR-P-wetherbeei_contig8108:1..185Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig8108 2..185 -
1683187020.9539373-UTR-P-wetherbeei_contig8108:327..5271683187020.9539373-UTR-P-wetherbeei_contig8108:327..527Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig8108 328..527 -
1683187021.0369043-UTR-P-wetherbeei_contig8108:2874..28921683187021.0369043-UTR-P-wetherbeei_contig8108:2874..2892Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig8108 2875..2892 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187020.9639406-CDS-P-wetherbeei_contig8108:527..5991683187020.9639406-CDS-P-wetherbeei_contig8108:527..599Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8108 528..599 -
1683187020.973971-CDS-P-wetherbeei_contig8108:800..8601683187020.973971-CDS-P-wetherbeei_contig8108:800..860Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8108 801..860 -
1683187020.9849582-CDS-P-wetherbeei_contig8108:1143..12841683187020.9849582-CDS-P-wetherbeei_contig8108:1143..1284Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8108 1144..1284 -
1683187020.9950857-CDS-P-wetherbeei_contig8108:1483..16091683187020.9950857-CDS-P-wetherbeei_contig8108:1483..1609Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8108 1484..1609 -
1683187021.005654-CDS-P-wetherbeei_contig8108:1858..19951683187021.005654-CDS-P-wetherbeei_contig8108:1858..1995Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8108 1859..1995 -
1683187021.0159822-CDS-P-wetherbeei_contig8108:2291..24191683187021.0159822-CDS-P-wetherbeei_contig8108:2291..2419Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8108 2292..2419 -
1683187021.0265312-CDS-P-wetherbeei_contig8108:2749..28741683187021.0265312-CDS-P-wetherbeei_contig8108:2749..2874Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig8108 2750..2874 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig8108.1.3

>prot_P-wetherbeei_contig8108.1.3 ID=prot_P-wetherbeei_contig8108.1.3|Name=mRNA_P-wetherbeei_contig8108.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=263bp
MASNPEAANKAIADLYQQEEINPLAGCLPTIAQIPIFISLYRALLNLAKE
DKLAEPFLWLPSLEGPVYQAPPTETLRWLNSGWDGFTPPLGWHDTLCFLT
IPIILVISQSISQQLMQPPQQKNQQSDTSQAVLKYLPLLIGWFSLNVPSG
LGVYWIINNFLSTSVSVFIRNQISAEKGLPTTGFSMGNMMGGAEAPSVSS
SSLRNTRDDAEEGATEKPKGFAVVSDDEIEGEIVSADDKVAQPKVKAPKS
GGSSKKKRRNRK*
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mRNA from alignment at P-wetherbeei_contig8108:2..2892-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig8108.1.3 ID=mRNA_P-wetherbeei_contig8108.1.3|Name=mRNA_P-wetherbeei_contig8108.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2891bp|location=Sequence derived from alignment at P-wetherbeei_contig8108:2..2892- (Phaeothamnion wetherbeei SAG_119_79)
AAGGAGATCCAGGCCAAGATGGCGAGCAACCCCGAGGCGGCCAACAAGGC CATCGCGGACCTCTACCAGCAGGAAGAGATCAACCCGCTGGCCGGCTGCC TCCCCACCATTGCACAGATCCCCATCTTCATCTCCCTCTACCGGTGAGGC AGAGAGATGGCAGACGCAGCAGATTTGTGGGCAGAAAGGGGGCAGCAGAG GCAGAGACCAGTGCAGGCTGGCAGAGATGGGTAGAACGGGGGCGGTAAAC CCCGTTGCCTTTTTGTGTGGTTAACGTTTCTCTCCCTGTCGCCCTTCATG GTTGTGGTGCAGTAGCTGTCCTTCCCCTCCGTTTCGTTATCAGAGCCTAC TTGCCTACAACTCATGGCACATTGATTCTCAAACCTCTTCGAATTTACTA CCATGGTCGTTCGTGGCGGCGGCGATGACCGTGGGAACGGCGGAAACGGC GACTTCTTTGGGCGACAACATAGCGCTCTGCTGAATTTGGCGAAAGAGGA CAAGCTGGCGGAGCCCTTCCTGTGGCTGCCATCGCTAGAGGGCCCCGTTT ACCAGGCGCCGCCCACTGAGACCCTCCGTTGGCTCAACTCAGGCTGGGAT GGTGAGTTGCTTTCCCGTTTCGGCTTAGCTGCGCTGTTGGCGTTGTGCTT AAGGCGGCTGGCGCGATGTTGCAGCAGCGGCGGCACACCCACGCCGGGGA ACGGAGTAGCGGTGGCGGCCGCACTGAGACACTTGGGATGCCTCTTGTTG TGTGCCAGAAGCAACATATCACTTTCGCATTTTGTGGTGCGGTGTGCAGC ATCGTCCATTTTCCACCGGCGTCCTGGGTTACTCATGCCTCCTTTATTCT CGCTCTCTCTCCCCTTCAACCCAAACTGCACATATGGTGCATAACAGGTT TCACGCCGCCACTGGGTTGGCACGACACACTATGCTTCCTGACCATCCCA ATCATCCTCGTTATCTCGCAGTCCATCTCCCAGCAGCTCATGCAGCCGCC GCAGCAGAAGAACCAGCAGAGCGACACCTCCCAGGTGCGGCCCGGTTTTC GGGTTGCGCGGTGCTTTTTCCGCTCTCTTTGTCTTTGGACAGCCCGCCTC CTTCTTGCAAAACGTTTCCTTTTCCGTTTTTCTTTTCCTTCCGGCTGTTC GCCGCTTATGTGTCGCTGCTCAAGGTGTATTGAAACATGCTGAGCTATCT CTCATTCAACGTCCCGCTCTGTACGGCCGCCACCCAAATTGGAACCGGTG AACCGAATGGGTGACCCGGGCCGGCTGACGCAGGCGGTGCTGAAGTACCT TCCCTTGCTGATCGGGTGGTTCTCGCTGAACGTGCCGTCGGGGCTCGGGG TGTACTGGATCATCAACAACTTCCTCAGCACCTCTGTCTCCGTCTTCATC CGCAACCAGGTGCGGGCCACGTTCGGTGGAGCCGCTGGGCGGGCGAATCA TTTGTCCCCCGTGGATTTGTCTTTTCTGAACTTTTGAATCATCTTTTTAA CCATTGGAGCGAGTCTTTCTTTAACATGCCCTGACGCGCCATACGCACGG CGTCGCCCGAAATCCCCTATCGCACCCTCCTGTAAATGTGGCCCTGGGTG GAGGGCAGATTTCGGCGGAGAAAGGGCTGCCGACGACCGGTTTCTCGATG GGGAACATGATGGGGGGCGCCGAGGCGCCGAGCGTGTCGTCGTCGTCGCT GCGGAACACCCGGGACGACGCGGAAGAGGGGGCGACGGAGAAGCCCAAGG TGCATCTCTAGTTCTTTTCTCCGTTTCATGGTTTTCGTATTCTGTTTACA GACATCTGGAGCGATTTCTGAACTTTTCGCTACGCTCGTGTGGGTGGCTT CCGTGGAAAATATATCTGGTTGCCGTTCGTGATGTGAAATTTGAGGTTCA ATGCCAGCGATGTGGCGGTTAGCCATTTTCAATCTTATAATGCAAAGAGC CACTCCCCTCCAAGCTCGGTGTAATCACGCCGACGGACGCATGGTGCTTT TTCGACGCGTGCCCGCGCTGTTTACGCTGCAGGGCTTTGCGGTGGTTAGC GATGATGAGATTGAAGGAGAGATTGTGTCAGCCGACGACAAGGTGAGGTG CCTTGAATGGCTGTTCCGTCTTTCTTTCCCCCCTGTTTCTCCTCCTCGTT TTCCTGCTGCCAAAAACGTGTTTGAGGTCGCTGTTCTTCGCCATTTCGTT TCCCTTCTGCTGCCTCGGACCCTTCCTTCGGATGGCTTTTTGCTCAAACC CTCACTTTATAGTTTTGTTACCTTACCGAACGCATCTTGGCAGGTGGCGC AGCCAAAGGTGAAGGCGCCAAAGTCGGGCGGCAGCAGCAAGAAGAAGAGG AGGAACCGGAAGTAGAGCAAGCAGCACAAAACGCTTACTCTGTGTCAACT CGCGTCTTTCCGCCATCGGCTGCCGATGTGGCAGTGGCAGCGCGTGCAAT CGCCGGCGACAGCACTGGAGCAACTGCGGCAGGAAAACTCCCCATCGAAG GCGGCGGCTCCTCTACGATGACAGAAGCAGCAACCCAGGCGGTGGCCGTA GCAGCAACGGCAGCAGCAGCGGCAGCAGTGGTAGCGGCGGCGGCAGCGGC GGCGGCGGCGGCGGCGGCGGCAGCGGCGGCGGCGGCAGCAGCAGCAGCGG CGGCGGCGGCAGCAGCAGCAGCGGCGGTGGCAGCAGCGGCGGCAGCGGCG GTGGTAGCGGCGGTGGTAGCGCAGTCTTTGTCGACATTGACGGCAACCGC AACGGTGGTGACAGCTGCGTCGATGGCGACGGTAGCGCTGTTGACCTCGG CCGCAGCGACGGCGGGACCTGAGCCGGATTCAGGTCGACATTTTTTGGCG GGTAGAAAGGGATGGGCAGGACGGCGGGGCTGGGACCAAGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig8108:2..2892-

>mRNA_P-wetherbeei_contig8108.1.3 ID=mRNA_P-wetherbeei_contig8108.1.3|Name=mRNA_P-wetherbeei_contig8108.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=789bp|location=Sequence derived from alignment at P-wetherbeei_contig8108:2..2892- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCGAGCAACCCCGAGGCGGCCAACAAGGCCATCGCGGACCTCTACCA
GCAGGAAGAGATCAACCCGCTGGCCGGCTGCCTCCCCACCATTGCACAGA
TCCCCATCTTCATCTCCCTCTACCGCGCTCTGCTGAATTTGGCGAAAGAG
GACAAGCTGGCGGAGCCCTTCCTGTGGCTGCCATCGCTAGAGGGCCCCGT
TTACCAGGCGCCGCCCACTGAGACCCTCCGTTGGCTCAACTCAGGCTGGG
ATGGTTTCACGCCGCCACTGGGTTGGCACGACACACTATGCTTCCTGACC
ATCCCAATCATCCTCGTTATCTCGCAGTCCATCTCCCAGCAGCTCATGCA
GCCGCCGCAGCAGAAGAACCAGCAGAGCGACACCTCCCAGGCGGTGCTGA
AGTACCTTCCCTTGCTGATCGGGTGGTTCTCGCTGAACGTGCCGTCGGGG
CTCGGGGTGTACTGGATCATCAACAACTTCCTCAGCACCTCTGTCTCCGT
CTTCATCCGCAACCAGATTTCGGCGGAGAAAGGGCTGCCGACGACCGGTT
TCTCGATGGGGAACATGATGGGGGGCGCCGAGGCGCCGAGCGTGTCGTCG
TCGTCGCTGCGGAACACCCGGGACGACGCGGAAGAGGGGGCGACGGAGAA
GCCCAAGGGCTTTGCGGTGGTTAGCGATGATGAGATTGAAGGAGAGATTG
TGTCAGCCGACGACAAGGTGGCGCAGCCAAAGGTGAAGGCGCCAAAGTCG
GGCGGCAGCAGCAAGAAGAAGAGGAGGAACCGGAAGTAG
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