mRNA_P-wetherbeei_contig8108.1.3 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig8108.1.3 vs. uniprot
Match: A0A835YLS0_9STRA (Alb3-like protein, thylakoidal inner membrane insertase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLS0_9STRA) HSP 1 Score: 285 bits (730), Expect = 2.030e-89 Identity = 153/273 (56.04%), Postives = 200/273 (73.26%), Query Frame = 1
Query: 1 KEIQAKMASNPEAANKAIADLYQQEEINPLAGCLPTIAQIPIFISLYRALLNLAKEDKLAEPFLWLPSLEGPVYQAPPTETLRWLNSGWDGFTPPLGWHDTLCFLTIPIILVISQSISQQLMQPPQQKNQQSDTSQAVLKYLPLLIGWFSLNVPSGLGVYWIINNFLSTSVSVFIRNQISAEKGLPTTGFSMGNMMGGAEAPSVSSSSL-----RNTRDDAEEGATEKPKGFAVVSDDE---IEGEIVSADDKVAQPKVKAPKSGGSSKKKRR 795
K+IQ ++A+NPEAANKAIADLY++EE+NPL+GCLP++AQIPIFISLYRALLNLAKE+KL E FLWLPSLEGPV+ APPTE+L W+ + W+ P LGWHDTLC+L+IP+ILVI+QSISQQL+ PP+++ ++DTSQA+LKYLPLLIGWFSLNVPSGLG+YWI+NN +ST+ SV IR Q+ GLP T + + A A + L ++ D A E+ KGF + E ++GEI++A+ VK KS G K+ ++
Sbjct: 162 KDIQKRLANNPEAANKAIADLYKEEEVNPLSGCLPSLAQIPIFISLYRALLNLAKENKLDEGFLWLPSLEGPVFGAPPTESLNWIKT-WENGVPALGWHDTLCYLSIPVILVITQSISQQLISPPKKEGAEADTSQAILKYLPLLIGWFSLNVPSGLGLYWIVNNIVSTAASVLIRQQL----GLPATAGATPGVTAEANATVAKAKVLDAEVVKSVSDMAPGTQLEEAKGFGSAAQSEGEDVQGEIIAANSS-----VKPKKSSGKKKRSKK 424
BLAST of mRNA_P-wetherbeei_contig8108.1.3 vs. uniprot
Match: D8LUC7_ECTSI (Alb3 homolog, thylakoidal inner membrane insertase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LUC7_ECTSI) HSP 1 Score: 258 bits (658), Expect = 2.260e-78 Identity = 141/257 (54.86%), Postives = 179/257 (69.65%), Query Frame = 1
Query: 1 KEIQAKMASNPEAANKAIADLYQQEEINPLAGCLPTIAQIPIFISLYRALLNLAKEDKLAEPFLWLPSLEGPVYQAPPTETLRWLNSGWDGFTPPLGWHDTLCFLTIPIILVISQSISQQLMQPPQQKNQQSDTSQA----VLKYLPLLIGWFSLNVPSGLGVYWIINNFLSTSVSVFIRNQISAEKGLPTTGFSMGNMMGGAEAPSVSSSSL-RNTRDDAEEGATEKPKGFA---VVSDDEIEGEIVSADDKVAQP 747
KE+QA+ A+NPEAAN+A+ LYQ E +NPLAGCLP +AQIPIFISLYR+LLNLAKE+KL E FLW+PSLEGP + +PPTE + W+ DG P LGWHDT+ ++TIPIILVI+QSIS ++MQP + +Q D SQA ++K+LPL+IGWFSL+VPS LG+YWI+NNF+ST+ SVFIRNQI+ E G P + E P V + + R D+ E+ KGF D E+EGEIV D A P
Sbjct: 173 KELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTEMMSWIKDWSDG-APKLGWHDTIAYMTIPIILVITQSISTRIMQPAKDPSQPVDESQAASQNIVKFLPLMIGWFSLSVPSALGLYWILNNFISTATSVFIRNQIADETGDPNMKAPKITLPFMEEEPEVVTMPIPREALPDS--AVVEETKGFVPTPATLDAEVEGEIVKEDGAPAPP 426
BLAST of mRNA_P-wetherbeei_contig8108.1.3 vs. uniprot
Match: A0A7S2XXH5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXH5_9STRA) HSP 1 Score: 232 bits (592), Expect = 1.880e-68 Identity = 112/184 (60.87%), Postives = 144/184 (78.26%), Query Frame = 1
Query: 1 KEIQAKMA-SNPEAANKAIADLYQQEEINPLAGCLPTIAQIPIFISLYRALLNLAKEDKLAEPFLWLPSLEGPVYQAPPTETLRWLNSGWDGFTPPLGWHDTLCFLTIPIILVISQSISQQLMQPPQQKNQQS--DTSQAVLKYLPLLIGWFSLNVPSGLGVYWIINNFLSTSVSVFIRNQISA 543
KEIQAK+ +NPE AN+ IADLYQ+E++NPLAGC+P + QIPIFISLYRALLNLA E+KL E FLWLPSL+GP Y A P + + WL +GW+ PPLGW DTL FLT+P+ILVISQ IS Q+MQP + + + +Q + K LPL+IG+FSLNVPSGL +YW+ NNFL+T +++F+R Q+ A
Sbjct: 162 KEIQAKVGQTNPERANQLIADLYQKEQVNPLAGCVPALVQIPIFISLYRALLNLAAEEKLNEAFLWLPSLDGPTYGASPADGMNWLKTGWEDGVPPLGWPDTLAFLTLPVILVISQYISTQIMQPKVKPGEPDPMEQNQLLFKVLPLMIGYFSLNVPSGLAIYWVANNFLTTGLTLFVRKQVEA 345
BLAST of mRNA_P-wetherbeei_contig8108.1.3 vs. uniprot
Match: A0A7S2FBB2_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FBB2_9STRA) HSP 1 Score: 231 bits (589), Expect = 1.880e-68 Identity = 111/186 (59.68%), Postives = 143/186 (76.88%), Query Frame = 1
Query: 1 KEIQAKMASNPEAANKAIADLYQQEEINPLAGCLPTIAQIPIFISLYRALLNLAKEDKLAEPFLWLPSLEGPVYQAPPTETLRWLNSGWDGFTPPLGWHDTLCFLTIPIILVISQSISQQLMQPPQQKNQQSDTSQAVL----KYLPLLIGWFSLNVPSGLGVYWIINNFLSTSVSVFIRNQISAE 546
K+IQAK SNPE N+ ++ LYQ +NPLAGCLP I QIPIFI LYRALL LAK+D L EPFLWLP+LEGPVY A + WL W FTPPLGWHDTLCFL++P+ILVISQS SQ+L+ PP+ + Q+ D SQ + KYLP++ G+F+LNVPSGLGVYW+INNF++T +++F++ +++ E
Sbjct: 158 KDIQAKYKSNPEVMNREMSALYQDNSVNPLAGCLPAIVQIPIFIGLYRALLKLAKDDLLNEPFLWLPNLEGPVYGA---QNSDWLFQNWVDFTPPLGWHDTLCFLSLPVILVISQSYSQKLLTPPKPEGQKMDESQEAMQSTFKYLPIVFGFFALNVPSGLGVYWLINNFVTTGLNLFVKAKVAEE 340
BLAST of mRNA_P-wetherbeei_contig8108.1.3 vs. uniprot
Match: W7U5Y4_9STRA (Membrane insertion protein, OxaA/YidC n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U5Y4_9STRA) HSP 1 Score: 221 bits (564), Expect = 8.270e-65 Identity = 106/184 (57.61%), Postives = 137/184 (74.46%), Query Frame = 1
Query: 1 KEIQAKMASNPEAANKAIADLYQQEEINPLAGCLPTIAQIPIFISLYRALLNLAKEDKLAEPFLWLPSLEGPVYQAPPTETLRWLNSGWDGFTPPLGWHDTLCFLTIPIILVISQSISQQLMQPPQQKNQ-QSDTSQAVLKYLPLLIGWFSLNVPSGLGVYWIINNFLSTSVSVFIRNQISAEK 549
KEIQAK S+P + +A LY +NPLAGCLP + QIPIFISLYRAL NLA ++L EPFLWLP+LEGP Y A P + + WL W+GFTP LGWHDT+ FLT+P+IL++SQSISQQ++QP K+ + SQA+LK+LP ++G+FSLNVPSGLGVYWI NN ++T +V +R I ++
Sbjct: 212 KEIQAKYKSDPTLQQQKMAQLYSDNNVNPLAGCLPALVQIPIFISLYRALTNLAAANELNEPFLWLPNLEGPTYGAGPADGMNWLKQ-WEGFTPSLGWHDTIAFLTVPLILIVSQSISQQILQPAANKDDPNAQQSQAILKFLPFMVGYFSLNVPSGLGVYWIANNLITTLTTVAVRAVIQGKE 394
BLAST of mRNA_P-wetherbeei_contig8108.1.3 vs. uniprot
Match: A0A7S1FKR9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FKR9_9STRA) HSP 1 Score: 221 bits (564), Expect = 1.160e-64 Identity = 118/228 (51.75%), Postives = 148/228 (64.91%), Query Frame = 1
Query: 1 KEIQAKMASNPEAANKAIADLYQQEEINPLAGCLPTIAQIPIFISLYRALLNLAKEDKLAEPFLWLPSLEGPVYQAPPTETLRWLNSGWDGFTPPLGWHDTLCFLTIPIILVISQSISQQLMQPPQQKNQQSDTSQ-AVLKYLPLLIGWFSLNVPSGLGVYWIINNFLSTSVSVFIRNQISAEKGLPTTGFSMGNMMGGAEAPSVSSSSLRNTRDDAEEGATEKPKGF 681
K IQAK SNPE NK I+ +YQ E+NPLAGCLP + QIP+FI LYRA+L+LAKEDKL +PFLWLP+LEGP Y A P W+ GW P LGW DT+ FL+IP+IL++ Q++S QLMQPP+ + +D S VLK LPLLIGWFSLNVPS LG+YWI N +ST +V I+N ++ SM AE+P V+ S+ + EKP GF
Sbjct: 199 KGIQAKYQSNPEEMNKRISAVYQDNEVNPLAGCLPALVQIPVFIGLYRAVLDLAKEDKLEQPFLWLPNLEGPTYGADPAHASDWILKGWHDGAPSLGWEDTIAFLSIPLILIVLQAVSTQLMQPPKNPDDPNDPSNNVVLKALPLLIGWFSLNVPSALGIYWITNTLVSTLSTVLIKNSLAG---------SMPAAAAAAESPVVTQSASVYSPP-----VREKPAGF 412
BLAST of mRNA_P-wetherbeei_contig8108.1.3 vs. uniprot
Match: K8YSD2_NANGC (Preprotein translocase subunit YidC n=2 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YSD2_NANGC) HSP 1 Score: 221 bits (564), Expect = 5.050e-64 Identity = 106/184 (57.61%), Postives = 137/184 (74.46%), Query Frame = 1
Query: 1 KEIQAKMASNPEAANKAIADLYQQEEINPLAGCLPTIAQIPIFISLYRALLNLAKEDKLAEPFLWLPSLEGPVYQAPPTETLRWLNSGWDGFTPPLGWHDTLCFLTIPIILVISQSISQQLMQPPQQKNQ-QSDTSQAVLKYLPLLIGWFSLNVPSGLGVYWIINNFLSTSVSVFIRNQISAEK 549
KEIQAK S+P + +A LY +NPLAGCLP + QIPIFISLYRAL NLA ++L EPFLWLP+LEGP Y A P + + WL W+GFTP LGWHDT+ FLT+P+IL++SQSISQQ++QP K+ + SQA+LK+LP ++G+FSLNVPSGLGVYWI NN ++T +V +R I ++
Sbjct: 174 KEIQAKYKSDPTLQQQKMAQLYSDNNVNPLAGCLPALVQIPIFISLYRALTNLAAANELNEPFLWLPNLEGPTYGAGPADGMNWLKQ-WEGFTPSLGWHDTIAFLTVPLILIVSQSISQQILQPAANKDDPNAQQSQAILKFLPFMVGYFSLNVPSGLGVYWIANNLITTLTTVAVRAVIQGKE 356
BLAST of mRNA_P-wetherbeei_contig8108.1.3 vs. uniprot
Match: A0A7S2EC37_9STRA (Hypothetical protein n=5 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EC37_9STRA) HSP 1 Score: 221 bits (562), Expect = 6.770e-64 Identity = 104/179 (58.10%), Postives = 136/179 (75.98%), Query Frame = 1
Query: 1 KEIQAKMASNPEAANKAIADLYQQEEINPLAGCLPTIAQIPIFISLYRALLNLAKEDKLAEPFLWLPSLEGPVYQAPPTETLRWLNSGWDGFTPPLGWHDTLCFLTIPIILVISQSISQQLMQPPQQKNQQSDTSQAVLKYLPLLIGWFSLNVPSGLGVYWIINNFLSTSVSVFIRNQI 537
KE+QAK SNPE N+ IA++YQ E+NPLAGC+P+I QIP+FI LYRA+LNLAK D L EPFLWLP+LEGP Y A PT WL W TP LGW +T+ FL IP+ILVISQ +S QLMQP + QQ + A+LK+LPL+IG+FSL+VP+ LG+YW+ NNF++T++++ +RN +
Sbjct: 200 KEVQAKYQSNPEVMNQKIAEIYQTNEVNPLAGCIPSIVQIPVFIGLYRAVLNLAKADALDEPFLWLPNLEGPTYGADPTTGSDWLFKNWVDGTPSLGWDNTVAFLAIPVILVISQFVSMQLMQPKSEDPQQQQAN-AILKFLPLMIGYFSLSVPAALGIYWVTNNFVTTAITLSVRNSL 377
BLAST of mRNA_P-wetherbeei_contig8108.1.3 vs. uniprot
Match: A0A1Z5JPG7_FISSO (YidC/Oxa1 family membrane protein insertase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JPG7_FISSO) HSP 1 Score: 218 bits (554), Expect = 3.430e-63 Identity = 105/177 (59.32%), Postives = 133/177 (75.14%), Query Frame = 1
Query: 1 KEIQAKMASNPEAANKAIADLYQQEEINPLAGCLPTIAQIPIFISLYRALLNLAKEDKLAEPFLWLPSLEGPVYQAPPTETLRWLNSGWDGFTPPLGWHDTLCFLTIPIILVISQSISQQLMQPPQQKNQQSDTSQAVLKYLPLLIGWFSLNVPSGLGVYWIINNFLSTSVSVFIRN 531
KE+QAK SNPE N+ IA+ YQ +INPLAGCLP++AQIPIFI LYRA+L+LA+E+KL EPFLWLP+LEGP Y A PT WL GW P LGW DT+ FL +P++LV+SQ +S +LMQP + Q S A+LK LPL+IGWFSLNVP+ L VYW +NN ++T +S+FIR+
Sbjct: 150 KELQAKYQSNPEVMNQKIAEFYQSNDINPLAGCLPSLAQIPIFIGLYRAVLDLAQENKLNEPFLWLPNLEGPTYGADPTSGSDWLFKGWTDGVPSLGWDDTISFLILPVLLVVSQYLSMELMQPKTTDSAQQQ-SNAILKVLPLMIGWFSLNVPAALCVYWFVNNVITTGLSLFIRS 325
BLAST of mRNA_P-wetherbeei_contig8108.1.3 vs. uniprot
Match: A0A7S0CAS3_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CAS3_9STRA) HSP 1 Score: 217 bits (552), Expect = 5.810e-63 Identity = 103/184 (55.98%), Postives = 137/184 (74.46%), Query Frame = 1
Query: 1 KEIQAKMASNPEAANKAIADLYQQEEINPLAGCLPTIAQIPIFISLYRALLNLAKEDKLAEPFLWLPSLEGPVYQAPPTETLRWLNSGWDGFTPPLGWHDTLCFLTIPIILVISQSISQQLMQPPQQKNQ-----QSDTSQAVLKYLPLLIGWFSLNVPSGLGVYWIINNFLSTSVSVFIRNQI 537
KEIQAK ASNPE N+ ++ Y+ E+NPLAGCLP++AQ+PIFI LYRA+LNLAK++ L E FLWLPSLEGP Y A P L W+ GW P LGW DTL F T+P++LVI+Q ISQQ+MQPP+ ++ +DT+ +LK+LP ++G+FSL VPS LG+YW+INN +T+++V I+N I
Sbjct: 156 KEIQAKYASNPEVMNQKVSSFYKDNEVNPLAGCLPSLAQLPIFIGLYRAVLNLAKQNTLDESFLWLPSLEGPTYGADPAHGLDWVTQGWINGVPSLGWEDTLKFGTLPVLLVITQLISQQIMQPPKPESTGADDTAADTTNQILKFLPFMLGYFSLGVPSALGIYWVINNVATTALNVVIKNNI 339 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8108.1.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig8108.1.3 >prot_P-wetherbeei_contig8108.1.3 ID=prot_P-wetherbeei_contig8108.1.3|Name=mRNA_P-wetherbeei_contig8108.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=263bp MASNPEAANKAIADLYQQEEINPLAGCLPTIAQIPIFISLYRALLNLAKEback to top mRNA from alignment at P-wetherbeei_contig8108:2..2892- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig8108.1.3 ID=mRNA_P-wetherbeei_contig8108.1.3|Name=mRNA_P-wetherbeei_contig8108.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2891bp|location=Sequence derived from alignment at P-wetherbeei_contig8108:2..2892- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig8108:2..2892- >mRNA_P-wetherbeei_contig8108.1.3 ID=mRNA_P-wetherbeei_contig8108.1.3|Name=mRNA_P-wetherbeei_contig8108.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=789bp|location=Sequence derived from alignment at P-wetherbeei_contig8108:2..2892- (Phaeothamnion wetherbeei SAG_119_79)back to top |