mRNA_P-wetherbeei_contig809.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig809.2.1
Unique NamemRNA_P-wetherbeei_contig809.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig809.2.1 vs. uniprot
Match: D8LK39_ECTSI (Short chain dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK39_ECTSI)

HSP 1 Score: 79.0 bits (193), Expect = 9.710e-16
Identity = 38/92 (41.30%), Postives = 54/92 (58.70%), Query Frame = 1 
Query:    1 SQVAALCGKYRCVTVDLPNSTGLPPKE---PLDRTWGYRPSELSDLIISTIRAVNGGKPVMLIGHDWGAIYCYKVQQKAPELVSKLVAMDIG 267
            +QVA L  +YRCVT DLP  +G    +        WGY   E++  +  TI  V  GKPV ++ HDWG  Y + +++  P+LV KLVA+D+G
Sbjct:   34 AQVAHLKDRYRCVTTDLPGFSGDEDGDGGTASSSKWGYSFEEVAKRLERTIEDVGKGKPVFVVAHDWGCFYAFMLEKNRPDLVKKLVALDVG 125
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BLAST of mRNA_P-wetherbeei_contig809.2.1 vs. uniprot
Match: D8LS82_ECTSI (AB hydrolase-1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS82_ECTSI)

HSP 1 Score: 75.5 bits (184), Expect = 1.970e-14
Identity = 35/89 (39.33%), Postives = 53/89 (59.55%), Query Frame = 1 
Query:    1 SQVAALCGKYRCVTVDLPNSTGLPPKEPLDRTWGYRPSELSDLIISTIRAVNGGKPVMLIGHDWGAIYCYKVQQKAPELVSKLVAMDIG 267
            +QV  L  ++RCVT DLP  +G    +     WGY   E+   I  T   V  G+P++L+ HD+G +Y +K + K P+LV K+VA+D+G
Sbjct:   43 AQVTHLKDRFRCVTTDLPGFSG---DDARVEKWGYSTEEVVKRIERTAERVGNGQPIILVAHDFGCMYSFKFEAKRPDLVRKMVAIDVG 128
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BLAST of mRNA_P-wetherbeei_contig809.2.1 vs. uniprot
Match: F2U504_SALR5 (AB hydrolase-1 domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U504_SALR5)

HSP 1 Score: 72.0 bits (175), Expect = 4.410e-13
Identity = 31/81 (38.27%), Postives = 48/81 (59.26%), Query Frame = 1 
Query:   25 KYRCVTVDLPNSTGLPPKEPLDRTWGYRPSELSDLIISTIRAVNGGKPVMLIGHDWGAIYCYKVQQKAPELVSKLVAMDIG 267
            KY C  + LP+ +G          W     ++ D++I  I+ VN GKPV ++ HDWGA++ Y +++KAPELV  L  +D+G
Sbjct:   53 KYHCACLSLPSYSGYDSSH----KWALDFPDVRDVLIRQIKEVNDGKPVHVVAHDWGAVFAYMIERKAPELVKTLSTIDVG 129
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BLAST of mRNA_P-wetherbeei_contig809.2.1 vs. uniprot
Match: D8LS83_ECTSI (Putative hydrolase of the alpha/beta fold superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS83_ECTSI)

HSP 1 Score: 68.6 bits (166), Expect = 1.020e-11
Identity = 36/89 (40.45%), Postives = 49/89 (55.06%), Query Frame = 1 
Query:    4 QVAALCGKYRCVTVDLPNSTGLPPKEPLD-RTWGYRPSELSDLIISTIRAVNGGKPVMLIGHDWGAIYCYKVQQKAPELVSKLVAMDIG 267
            QVA L  +YRCVT DLP       +   D    GY   E+   +  TI     G+PV LI HDWG  + + V++  PELV ++VA+D+G
Sbjct:   77 QVAHLKDRYRCVTTDLPGFGADSDEYDADVEKNGYSIDEIVRRLERTIEKAGNGEPVTLIAHDWGCTFSFLVEKNRPELVKRMVAIDVG 165
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BLAST of mRNA_P-wetherbeei_contig809.2.1 vs. uniprot
Match: A0A0Q7EQZ2_9BURK (Alpha/beta hydrolase n=1 Tax=Massilia sp. Root418 TaxID=1736532 RepID=A0A0Q7EQZ2_9BURK)

HSP 1 Score: 64.7 bits (156), Expect = 2.020e-10
Identity = 37/90 (41.11%), Postives = 54/90 (60.00%), Query Frame = 1 
Query:    4 QVAALCGKYRCVTVDLPN-STGLPPKE-PLDRTWGYRPSELSDLIISTIRAVNGGKPVMLIGHDWGAIYCYKVQQKAPELVSKLVAMDIG 267
            QVAAL G+YRC    LP    G P +  PLD        E++ LI    R  +  +PV+L+ HDWG+I+  +  Q+ P+LVS++VA+D+G
Sbjct:   45 QVAALSGQYRCARFTLPGFDLGKPRRPCPLD--------EMTSLIERIARLASPDRPVILMQHDWGSIFGTEFAQRHPQLVSRIVAVDVG 126
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BLAST of mRNA_P-wetherbeei_contig809.2.1 vs. uniprot
Match: A0A6L6Q160_9BURK (Alpha/beta fold hydrolase n=1 Tax=Massilia ginsengisoli TaxID=1462440 RepID=A0A6L6Q160_9BURK)

HSP 1 Score: 64.7 bits (156), Expect = 2.130e-10
Identity = 37/92 (40.22%), Postives = 55/92 (59.78%), Query Frame = 1 
Query:    1 SQVAALCGKYRCVTVDLPNSTGLPPKEPLDRTWGYRPSELSD---LIISTIRAVNGGKPVMLIGHDWGAIYCYKVQQKAPELVSKLVAMDIG 267
            +QVAAL G YRCV   LP   G  P +P       RP+ L D   LI   IR ++  +PV+L+ HDWG+I+  +   + P++VS++V +D+G
Sbjct:   37 AQVAALRGAYRCVRFTLP---GFEPGKPA------RPTSLVDTVALIHRVIRTISPDRPVILLQHDWGSIFGNQFALRHPQMVSRIVCVDVG 119
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BLAST of mRNA_P-wetherbeei_contig809.2.1 vs. uniprot
Match: A0A4P7BMD0_9BURK (Alpha/beta hydrolase n=2 Tax=Massilia plicata TaxID=321984 RepID=A0A4P7BMD0_9BURK)

HSP 1 Score: 63.5 bits (153), Expect = 4.550e-10
Identity = 38/90 (42.22%), Postives = 51/90 (56.67%), Query Frame = 1 
Query:    4 QVAALCGKYRCVTVDLPN-STGLPPKE-PLDRTWGYRPSELSDLIISTIRAVNGGKPVMLIGHDWGAIYCYKVQQKAPELVSKLVAMDIG 267
            QVAA    YRCV    P    G P +E PLD         L  L  + +R V+ GKPV+L+ HDWG ++ Y+   + PELVS++V +DIG
Sbjct:   15 QVAAFKANYRCVRFTWPGFEPGAPKQEHPLDA--------LIALCEAVVREVSPGKPVILMVHDWGCLFGYQFATRHPELVSRVVGVDIG 96
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BLAST of mRNA_P-wetherbeei_contig809.2.1 vs. uniprot
Match: A0A7W2F830_9BURK (Alpha/beta fold hydrolase n=1 Tax=Duganella sp. LX47W TaxID=2758570 RepID=A0A7W2F830_9BURK)

HSP 1 Score: 62.8 bits (151), Expect = 1.080e-9
Identity = 33/89 (37.08%), Postives = 50/89 (56.18%), Query Frame = 1 
Query:    1 SQVAALCGKYRCVTVDLPNSTGLPPKEPLDRTWGYRPSELSDLIISTIRAVNGGKPVMLIGHDWGAIYCYKVQQKAPELVSKLVAMDIG 267
            +QVAAL  +YRCV   LP      P+    R +G   +E+       +  V+ G+ V L+ HDWG ++ Y+   + PELVS++V +DIG
Sbjct:   37 AQVAALAPRYRCVRFTLPGFDSAKPR----RAFGL--NEMLATFARIVNQVSPGRKVTLMLHDWGCVFGYQFYMRHPELVSRIVGVDIG 119
[Close]
BLAST of mRNA_P-wetherbeei_contig809.2.1 vs. uniprot
Match: A0A7W2ENV0_9BURK (Alpha/beta fold hydrolase n=2 Tax=unclassified Duganella TaxID=2636909 RepID=A0A7W2ENV0_9BURK)

HSP 1 Score: 62.0 bits (149), Expect = 2.040e-9
Identity = 33/89 (37.08%), Postives = 51/89 (57.30%), Query Frame = 1 
Query:    1 SQVAALCGKYRCVTVDLPNSTGLPPKEPLDRTWGYRPSELSDLIISTIRAVNGGKPVMLIGHDWGAIYCYKVQQKAPELVSKLVAMDIG 267
            +QVAAL  +YRCV   LP      P+    R +G   +E+  +    +  V+ G+ V L+ HDWG ++ Y+   + PELVS++V +DIG
Sbjct:   37 AQVAALAPRYRCVRFTLPGFDCAKPR----RAYGL--NEMLAIFERIVTQVSPGRKVTLMLHDWGCVFGYQFYMRHPELVSRIVGVDIG 119
[Close]
BLAST of mRNA_P-wetherbeei_contig809.2.1 vs. uniprot
Match: A0A4P6L6Q4_9BURK (Alpha/beta hydrolase n=2 Tax=Massilia lutea TaxID=321985 RepID=A0A4P6L6Q4_9BURK)

HSP 1 Score: 61.6 bits (148), Expect = 2.350e-9
Identity = 34/89 (38.20%), Postives = 49/89 (55.06%), Query Frame = 1 
Query:    4 QVAALCGKYRCVTVDLPN-STGLPPKEPLDRTWGYRPSELSDLIISTIRAVNGGKPVMLIGHDWGAIYCYKVQQKAPELVSKLVAMDIG 267
            QVAAL   +RCV    P   TG P KE       +   EL  L    +R  +  +PV L+ HDWG ++ Y+  Q+ PELV++++ +DIG
Sbjct:   15 QVAALSPYFRCVRFTWPGFETGAPRKE-------HSLDELIALCEQVVRETSPDRPVTLLVHDWGCLFGYQFAQRHPELVARIIGVDIG 96
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig809.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LK39_ECTSI9.710e-1641.30Short chain dehydrogenase n=1 Tax=Ectocarpus silic... [more]
D8LS82_ECTSI1.970e-1439.33AB hydrolase-1 domain-containing protein n=2 Tax=E... [more]
F2U504_SALR54.410e-1338.27AB hydrolase-1 domain-containing protein n=1 Tax=S... [more]
D8LS83_ECTSI1.020e-1140.45Putative hydrolase of the alpha/beta fold superfam... [more]
A0A0Q7EQZ2_9BURK2.020e-1041.11Alpha/beta hydrolase n=1 Tax=Massilia sp. Root418 ... [more]
A0A6L6Q160_9BURK2.130e-1040.22Alpha/beta fold hydrolase n=1 Tax=Massilia ginseng... [more]
A0A4P7BMD0_9BURK4.550e-1042.22Alpha/beta hydrolase n=2 Tax=Massilia plicata TaxI... [more]
A0A7W2F830_9BURK1.080e-937.08Alpha/beta fold hydrolase n=1 Tax=Duganella sp. LX... [more]
A0A7W2ENV0_9BURK2.040e-937.08Alpha/beta fold hydrolase n=2 Tax=unclassified Dug... [more]
A0A4P6L6Q4_9BURK2.350e-938.20Alpha/beta hydrolase n=2 Tax=Massilia lutea TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig809contigP-wetherbeei_contig809:144..681 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LK39
Preferred nameEPHX4
PFAMsAbhydrolase_1,Abhydrolase_6
Model size267
Max annot lvl2759|Eukaryota
KEGG rclassRC01447,RC01728,RC01764,RC02528
KEGG koko:K01253,ko:K22368,ko:K22369
KEGG ReactionR07013,R07014,R07027,R07071,R07072,R07082,R09410,R09417,R09443
KEGG Pathwayko00980,ko04976,ko05204,map00980,map04976,map05204
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004301,GO:0005575,GO:0005622,GO:0005623,GO:0006629,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016787,GO:0016801,GO:0016803,GO:0018904,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0097176,GO:1901360
Exons2
Evalue1.59e-16
EggNOG OGsCOG0596@1|root,KOG4178@2759|Eukaryota
EC3.3.2.10,3.3.2.9
Description10-hydroxy-9-(phosphonooxy)octadecanoate phosphatase activity
Cds size267
COG categoryL
BRITEko00000,ko00001,ko01000,ko01002
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187019.4344535-CDS-P-wetherbeei_contig809:143..3401683187019.4344535-CDS-P-wetherbeei_contig809:143..340Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig809 144..340 +
1683187019.4470882-CDS-P-wetherbeei_contig809:611..6811683187019.4470882-CDS-P-wetherbeei_contig809:611..681Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig809 612..681 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig809.2.1prot_P-wetherbeei_contig809.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig809 144..681 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig809.2.1

>prot_P-wetherbeei_contig809.2.1 ID=prot_P-wetherbeei_contig809.2.1|Name=mRNA_P-wetherbeei_contig809.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=89bp
SQVAALCGKYRCVTVDLPNSTGLPPKEPLDRTWGYRPSELSDLIISTIRA
VNGGKPVMLIGHDWGAIYCYKVQQKAPELVSKLVAMDIG
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mRNA from alignment at P-wetherbeei_contig809:144..681+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig809.2.1 ID=mRNA_P-wetherbeei_contig809.2.1|Name=mRNA_P-wetherbeei_contig809.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=538bp|location=Sequence derived from alignment at P-wetherbeei_contig809:144..681+ (Phaeothamnion wetherbeei SAG_119_79)
TCGCAGGTTGCCGCCCTGTGCGGCAAGTACCGCTGCGTCACTGTCGACCT
CCCAAACAGCACGGGCCTCCCACCGAAGGAGCCACTGGACCGCACGTGGG
GCTATCGCCCCAGCGAACTGTCGGATCTTATCATTTCGACGATTCGGGCC
GTCAACGGCGGCAAGCCGGTGATGCTCATCGGCCATGACTGGGGCGCGTG
CGTGAGTCAGTCGCCACTCTTTCCTCTTCCGCGTGCCGTTTGACTTGTCG
TTGCCGGCGGAGCCAGTCGTCGTGTCTTGCGGTTTCCCGAGAGAATTTGC
TCGCTACTGTTTCAATAAACTAGAGGACTGACGTGCACTCCGCTTCCCGC
TTTCTCCTCGCACAGGTGAACAACGCGAGGACTGCCTTCCCCTTCCGCCT
TATCTTGTTCTCCCGCACATCTCCTTCCCTCACCCGTCTCTCTCGAAAAC
CTGCCGAACCTTTCGCAGCATCTACTGCTACAAGGTCCAGCAGAAGGCGC
CGGAGCTGGTTTCAAAGCTGGTCGCGATGGACATCGGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig809:144..681+

>mRNA_P-wetherbeei_contig809.2.1 ID=mRNA_P-wetherbeei_contig809.2.1|Name=mRNA_P-wetherbeei_contig809.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=267bp|location=Sequence derived from alignment at P-wetherbeei_contig809:144..681+ (Phaeothamnion wetherbeei SAG_119_79)
TCGCAGGTTGCCGCCCTGTGCGGCAAGTACCGCTGCGTCACTGTCGACCT
CCCAAACAGCACGGGCCTCCCACCGAAGGAGCCACTGGACCGCACGTGGG
GCTATCGCCCCAGCGAACTGTCGGATCTTATCATTTCGACGATTCGGGCC
GTCAACGGCGGCAAGCCGGTGATGCTCATCGGCCATGACTGGGGCGCCAT
CTACTGCTACAAGGTCCAGCAGAAGGCGCCGGAGCTGGTTTCAAAGCTGG
TCGCGATGGACATCGGC
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