mRNA_P-wetherbeei_contig8070.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig8070.1.1 vs. uniprot
Match: A0A7C4XMS3_9HYPH (Uncharacterized protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4XMS3_9HYPH) HSP 1 Score: 154 bits (389), Expect = 8.450e-42 Identity = 82/181 (45.30%), Postives = 109/181 (60.22%), Query Frame = 1
Query: 19 RMQRRIDAYAPGVRARIEPLIRRSRALDDLAESFPALLFALATGFGSDAARIATLDAVETGVSLKEAAARIGLPMWLRKLPASAFVNPIVSPPRDPALAERLVSLIPAQPAAAAAWLERILIAHHCGRPDLALWVAQQFRTAKPVAQGSAFLGVLAWAWYSGRPEEERASALITTRWKPTL 561
R RRI+A+AP R ++ L ++DLA+SFPALLFALATG+G+ A R A ++ G L+ AA +GLP WLR LPA AF P+ S P P A R+ IP+QPA A WLER+L A G + ALW +QFR KP+A FL + AWAW++ P+ L+ W+P+L
Sbjct: 23 RRTRRIEAFAPDYRRFVQDLANSCCRIEDLADSFPALLFALATGYGTPAGREAAFALIKAGAPLRRAADALGLPWWLRHLPAQAFTGPLGSVPSAPEFAARIAPFIPSQPALAGPWLERVLYACQAGHAEFALWTGRQFRGPKPLASERTFLELTAWAWHAFHPDTP-GHRLLRKAWEPSL 202
BLAST of mRNA_P-wetherbeei_contig8070.1.1 vs. uniprot
Match: A0A2W4MZL4_9PROT (Uncharacterized protein (Fragment) n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4MZL4_9PROT) HSP 1 Score: 124 bits (312), Expect = 1.690e-32 Identity = 69/174 (39.66%), Postives = 102/174 (58.62%), Query Frame = 1
Query: 1 PLMLDERMQRR---IDAYAPGVRARIEPLIRRSRALDDLAESFPALLFALATGFGSDAARIATLDAVETGVSLKEAAARIGLPMWLRKLPASAFVNPIVSPPRDPALAERLVSLIPAQPAAAAAWLERILIAHHCGRPDLALWVAQQFRTAKPVAQGSAFLGVLAWAWYSGRPE 513
P++L + RR + A+ R +++ L ++ +LAE+FPALLFALAT FG+ AR + +E G L+EAA +G+P W+RKLP AF + P DP A+R+V L+PA P AA WL+R+ A+ P+ ALWVA+ R P+ V AWAW++G+ +
Sbjct: 17 PIVLADGTSRRSQFLQAFHYSFRRKVDELAQQKHCFAELAETFPALLFALATDFGTAEARKRAIAHLEAGSRLREAAKALGVPWWMRKLPPQAFKKRLEQVPDDPLFAKRIVDLLPANPGMAAKWLDRVFQAYRLCGPEFALWVARHERFHAPLLTDPPLPYVAAWAWFAGQKD 190
BLAST of mRNA_P-wetherbeei_contig8070.1.1 vs. uniprot
Match: A0A7C2LRE8_9HYPH (Uncharacterized protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C2LRE8_9HYPH) HSP 1 Score: 123 bits (308), Expect = 5.540e-30 Identity = 70/164 (42.68%), Postives = 96/164 (58.54%), Query Frame = 1
Query: 19 RMQRRIDAYAPGVRARIEPLIRRSRALDDLAESFPALLFALATGFGSDAARIATLDAVETGVSLKEAAARIGLPMWLRKLPASAFVNPIVSPPRDPALAERLVSLIPAQPAAAAAWLERILIAHHCGRPDLALWVAQQFRTAKPVAQGSAFLGVLAWAWYSGRP 510
R RR+D++ P R + L S L+DLA++FPALLFAL +G+ R + V G L+EAA +GLP WLR+LPA AF P+ + PRD A + R+ SL+P + A WL+R+ A P+ ALW+A+Q A P A + AWAW+SGRP
Sbjct: 24 RRARRLDSFHPCYRRYVAELTACSSELEDLADTFPALLFALVSGYAGPGQRERCFNLVCEGAPLREAADVLGLPWWLRRLPAPAFAEPLPAFPRDEAFSFRMASLVPREQRLAPLWLQRVSYAFEAAGPEYALWLARQHDLAGP--HEDALRLMAAWAWFSGRP 185
BLAST of mRNA_P-wetherbeei_contig8070.1.1 vs. uniprot
Match: A0A2W4RZ73_9PROT (Uncharacterized protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4RZ73_9PROT) HSP 1 Score: 122 bits (307), Expect = 7.100e-30 Identity = 68/181 (37.57%), Postives = 104/181 (57.46%), Query Frame = 1
Query: 19 RMQRRIDAYAPGVRARIEPLIRRSRALDDLAESFPALLFALATGFGSDAARIATLDAVETGVSLKEAAARIGLPMWLRKLPASAFVNPIVSPPRDPALAERLVSLIPAQPAAAAAWLERILIAHHCGRPDLALWVAQQFRTAKPVAQGSAFLGVLAWAWYSGRPEEERASALITTRWKPTL 561
R + + ++ R R++ + ++ ++LAE+FP LLFALAT +G+ AR A + + +G L+EAA +GLP W+RKLP AF + + P DP + R+V+L+P PA +A WLER+ A+ P+ ALWVA+ R P+ A V AWAW++ PE L+ W P +
Sbjct: 26 RRSQLLQSFHFSCRRRVDEIANQAACFEELAETFPGLLFALATNYGTAEARRAAVAHLISGSRLREAANALGLPWWMRKLPPQAFNKRLETLPDDPKFSARIVNLLPTVPAISAKWLERVTQAYRICGPEFALWVARHDRFHAPLITDPALPYVAAWAWFADHPET-LGGQLLRRPWTPNM 205
BLAST of mRNA_P-wetherbeei_contig8070.1.1 vs. uniprot
Match: A0A1Q3JS10_9PROT (Uncharacterized protein (Fragment) n=1 Tax=Alphaproteobacteria bacterium 64-6 TaxID=1895710 RepID=A0A1Q3JS10_9PROT) HSP 1 Score: 115 bits (288), Expect = 6.040e-28 Identity = 69/174 (39.66%), Postives = 90/174 (51.72%), Query Frame = 1
Query: 43 YAPGVRARIEPLIRRSRALDDLAESFPALLFALATGFGSDAARIATLDAVETGVSLKEAAARIGLPMWLRKLPASAFVNPIVSPPRDPALAERLVSLIPAQPAAAAAWLERILIAHHCGRPDLALWVAQQFRTAKPVAQGSAFLGVLAWAWYSGRPEEERASALITTRWKPTLG 564
+ R +I L R ++DLA SFPALLFALAT + + R LDA+ G LK A +GLP WLR+LP +A P+ P DP A V +P QP A WL+ I +A D+ALW A+ R PVA + L LAWA+Y+ P+ A + W P G
Sbjct: 27 FPASFRTQIAELTEGGRNIEDLAASFPALLFALATDYATPERRRVALDAILAGKKLKAVAQLLGLPFWLRRLPPAALTGPLPVLPDDPDFALTAVPALPRQPEAMLPWLDFISLADRLAGRDVALWFARHHRLTPPVAANAEALWTLAWAFYAKHPDT-LAGRIQRRSWTPRTG 199
BLAST of mRNA_P-wetherbeei_contig8070.1.1 vs. uniprot
Match: A0A1E4CSW5_9HYPH (Uncharacterized protein n=2 Tax=unclassified Hyphomicrobium TaxID=2619925 RepID=A0A1E4CSW5_9HYPH) HSP 1 Score: 117 bits (292), Expect = 6.350e-28 Identity = 70/174 (40.23%), Postives = 91/174 (52.30%), Query Frame = 1
Query: 43 YAPGVRARIEPLIRRSRALDDLAESFPALLFALATGFGSDAARIATLDAVETGVSLKEAAARIGLPMWLRKLPASAFVNPIVSPPRDPALAERLVSLIPAQPAAAAAWLERILIAHHCGRPDLALWVAQQFRTAKPVAQGSAFLGVLAWAWYSGRPEEERASALITTRWKPTLG 564
+ R +I L R ++DLA SFPALLFALAT + + R A LDA+ G LK A +GLP WLR+LP +A P+ P DP A V +P QP A WL+ I +A D+ALW A+ R PVA + L LAWA+Y+ P+ A + W P G
Sbjct: 27 FPASFRTQIAELTEGGRNIEDLAASFPALLFALATDYATPERRRAALDAILAGKKLKAVAQLLGLPFWLRRLPPAALTGPLPVLPDDPDFALTAVPALPRQPEAMLPWLDFISLADRIAGRDVALWFARHHRLTPPVAANTEALWTLAWAFYAKHPDT-LAGRIQRRSWTPRTG 199
BLAST of mRNA_P-wetherbeei_contig8070.1.1 vs. uniprot
Match: A0A6N6T388_9HYPH (Uncharacterized protein n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A6N6T388_9HYPH) HSP 1 Score: 110 bits (276), Expect = 1.770e-25 Identity = 67/164 (40.85%), Postives = 89/164 (54.27%), Query Frame = 1
Query: 19 RMQRRIDAYAPGVRARIEPLIRRSRALDDLAESFPALLFALATGFGSDAARIATLDAVETGVSLKEAAARIGLPMWLRKLPASAFVNPIVSPPRDPALAERLVSLIPAQPAAAAAWLERILIAHHCGRPDLALWVAQQFRTAKPVAQGSAFLGVLAWAWYSGRP 510
R +RR+ + P R + L S AL+DLA+SFPA+LFALATG+G+ +R V G L+EAA +GLP WLRKLP AF P+ P DP A R+ SL+P A W R+ A + ALW+ +Q AF+ AW+W+S RP
Sbjct: 20 RRERRLTDFHPAYRRYVRDLTCCSPALEDLADSFPAMLFALATGYGTPESRERAFGRVCDGAPLREAADALGLPWWLRKLPPQAFTAPLSPLPNDPDFAFRISSLVPRDTRLAPEWFNRVSHACEACGSEYALWLGRQPDLHSLADDHFAFMA--AWSWFSSRP 181
BLAST of mRNA_P-wetherbeei_contig8070.1.1 vs. uniprot
Match: A0A431NUU4_9HYPH (Uncharacterized protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A431NUU4_9HYPH) HSP 1 Score: 106 bits (264), Expect = 1.130e-23 Identity = 62/167 (37.13%), Postives = 92/167 (55.09%), Query Frame = 1
Query: 19 RMQRRIDAYAPGVRARIEPLIRRSRALDDLAESFPALLFALATGFGSDAARIATLDAVETGVSLKEAAARIGLPMWLRKLPASAFVNPIVSPPRDPALAERLVSLIPAQPAAAAAWLERILIAHHCGRPDLALWVAQQFRTAKPVAQGSAFLGVLAWAWYSGRPEEE 519
R +RRI+++ P + ++ + + ++DLA+SFPALLFAL + +G+ AAR A L V +G LK A+ + LP WLR+LPA AF + + P D R+ S +P + A AWL + A P ALW + + A + +G AWAW+S PE E
Sbjct: 28 RRKRRIESFHPAWQRQVAAITAGNPEIEDLADSFPALLFALVSDYGAPAARDAALAIVASGAPLKHASDALALPFWLRRLPALAFERRLPALPMDAEFGLRIASFVPRRSCEAVAWLGALSSAVTAAGPQYALWFTRAVKPAFMSEESLLMMG--AWAWFSQHPETE 192
BLAST of mRNA_P-wetherbeei_contig8070.1.1 vs. uniprot
Match: A0A537S6D5_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537S6D5_9PROT) HSP 1 Score: 106 bits (264), Expect = 1.250e-23 Identity = 65/164 (39.63%), Postives = 93/164 (56.71%), Query Frame = 1
Query: 19 RMQRRIDAYAPGVRARIEPLIRRSRALDDLAESFPALLFALATGFGSDAARIATLDAVETGVSLKEAAARIGLPMWLRKLPASAFVNPIVSPPRDPALAERLVSLIPAQPAAAAAWLERILIAHHCGRPDLALWVAQQFRTAKPVAQGSAFLGVLAWAWYSGRP 510
R +RR++++ P R I L + ++DLA+SFP LLFAL + + + R D V TG L++AA +GL WLR+LPA AF P+ + P D + + +LIP + + AWL R+ A G ALW+A+Q A P AF+ AWAW+SGRP
Sbjct: 33 RRRRRLESFHPCYRRYIAELTCCASEVEDLADSFPGLLFALVSRYATVEQRQRAFDLVCTGEPLRQAADALGLAWWLRRLPAHAFTEPLPAFPVDGDFSLHIANLIPREDSLVPAWLARVSQAVEAGDLAYALWIARQHDLAGPPEDLFAFMA--AWAWFSGRP 194
BLAST of mRNA_P-wetherbeei_contig8070.1.1 vs. uniprot
Match: A0A0D6JL93_9HYPH (Uncharacterized protein n=1 Tax=Candidatus Filomicrobium marinum TaxID=1608628 RepID=A0A0D6JL93_9HYPH) HSP 1 Score: 105 bits (262), Expect = 1.540e-23 Identity = 67/188 (35.64%), Postives = 99/188 (52.66%), Query Frame = 1
Query: 13 DERMQRRIDAYAPGVRARIEPLIRRSRALDDLAESFPALLFALATGFGSDAARIATLDAVETGVSLKEAAARIGLPMWLRKLPASAFVNPIVSPPRDPALAERLVSLIPAQPAAAAAWLERILIAHHCGRPDLALWVAQQFRTAKPVAQGSA----FLGVLAWAWYSGRPEEERASALITTRWKPTLG 564
+ R RR++A+ P R IE L++ S L+DLA+SFP LLFALATG+G A + A++ A+ G+ L+ AA + LP WLR+LP +A+ + I PR+ + +V LIP Q + WL I + ALW A+ + V F + AWAW++ R E L+ W +G
Sbjct: 16 ETRRYRRLEAFNPAFRRDIERLMQVSPELEDLADSFPGLLFALATGYGKPAKQRASIQAIRRGLPLQRAAMTLSLPWWLRRLPPAAYTHKISMLPRNVEFSRHVVDLIPTQTSDMGPWLWAIEHGYRGCHWHFALWAARWLSRSNRVLASPGGENNFRFLTAWAWHAER-EGTPGHQLVRKPWSSEMG 202 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig8070.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig8070.1.1 >prot_P-wetherbeei_contig8070.1.1 ID=prot_P-wetherbeei_contig8070.1.1|Name=mRNA_P-wetherbeei_contig8070.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=186bp MLDERMQRRIDAYAPGVRARIEPLIRRSRALDDLAESFPALLFALATGFGback to top mRNA from alignment at P-wetherbeei_contig8070:3..566- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig8070.1.1 ID=mRNA_P-wetherbeei_contig8070.1.1|Name=mRNA_P-wetherbeei_contig8070.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=564bp|location=Sequence derived from alignment at P-wetherbeei_contig8070:3..566- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig8070:3..566- >mRNA_P-wetherbeei_contig8070.1.1 ID=mRNA_P-wetherbeei_contig8070.1.1|Name=mRNA_P-wetherbeei_contig8070.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=558bp|location=Sequence derived from alignment at P-wetherbeei_contig8070:3..566- (Phaeothamnion wetherbeei SAG_119_79)back to top |