mRNA_P-wetherbeei_contig7970.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7970.1.1
Unique NamemRNA_P-wetherbeei_contig7970.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig7970.1.1 vs. uniprot
Match: A0A836CK73_9STRA (Peptidylprolyl isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK73_9STRA)

HSP 1 Score: 144 bits (364), Expect = 5.080e-39
Identity = 67/90 (74.44%), Postives = 79/90 (87.78%), Query Frame = 1 
Query:   34 PPSGCEVTADYTGTLEDGTKFDSSRDRGKPFKFTLGEGNVIRGWDVGFATMRRGERALLKCRADYAYGDHPPPGDTIKAGDTLVFDAELI 303
            PP G EV+A YTGTLEDGTKFDSSRDRG+PFKFT+G+G VI+GWD+GFATM+ GE+A+LKCRADYAYGD+P  G  IK GDTL+FD EL+
Sbjct:   36 PPKGYEVSAHYTGTLEDGTKFDSSRDRGQPFKFTIGQGQVIKGWDLGFATMKVGEKAILKCRADYAYGDNPS-GAIIKPGDTLLFDVELL 124
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BLAST of mRNA_P-wetherbeei_contig7970.1.1 vs. uniprot
Match: A0A7S2V5G3_9STRA (Peptidylprolyl isomerase (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5G3_9STRA)

HSP 1 Score: 134 bits (337), Expect = 1.200e-37
Identity = 62/95 (65.26%), Postives = 77/95 (81.05%), Query Frame = 1 
Query:   19 DDAELPPSGCEVTADYTGTLEDGTKFDSSRDRGKPFKFTLGEGNVIRGWDVGFATMRRGERALLKCRADYAYGDHPPPGDTIKAGDTLVFDAELI 303
            +DAE P  G +V A YTGTLEDG KFDSSRDRG+PFKF +G+G VI+GWDVGFA+M+ GE+A+LK R+DY YG+ PPPG  I+ G TL+FD EL+
Sbjct:   41 EDAETPVDGYDVEAHYTGTLEDGQKFDSSRDRGQPFKFVIGQGQVIKGWDVGFASMKVGEKAILKIRSDYGYGESPPPG-VIQPGSTLLFDVELL 134
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BLAST of mRNA_P-wetherbeei_contig7970.1.1 vs. uniprot
Match: A0A7S4D6Y5_HETAK (Peptidylprolyl isomerase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D6Y5_HETAK)

HSP 1 Score: 133 bits (334), Expect = 9.240e-35
Identity = 62/94 (65.96%), Postives = 76/94 (80.85%), Query Frame = 1 
Query:   22 DAELPPSGCEVTADYTGTLEDGTKFDSSRDRGKPFKFTLGEGNVIRGWDVGFATMRRGERALLKCRADYAYGDHPPPGDTIKAGDTLVFDAELI 303
            + E PP G EV A YTGTLEDG KFDSSRDRG+ FKFT+G+G VI+GWD+GFA+M+ GE+A+LK R+DY YG+ PPPG  I AG TL+FD EL+
Sbjct:   29 EGETPPDGDEVRAHYTGTLEDGQKFDSSRDRGQEFKFTIGQGQVIKGWDIGFASMKVGEQAILKIRSDYGYGESPPPG-IITAGATLLFDCELL 121
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BLAST of mRNA_P-wetherbeei_contig7970.1.1 vs. uniprot
Match: D8LKW9_ECTSI (Peptidylprolyl isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKW9_ECTSI)

HSP 1 Score: 130 bits (328), Expect = 9.070e-34
Identity = 59/90 (65.56%), Postives = 71/90 (78.89%), Query Frame = 1 
Query:   34 PPSGCEVTADYTGTLEDGTKFDSSRDRGKPFKFTLGEGNVIRGWDVGFATMRRGERALLKCRADYAYGDHPPPGDTIKAGDTLVFDAELI 303
            PP   EV+A YTGT+E G KFDSSRDRGKPF F +G G+VI+ WD+GF++M  GE+A+LKCRADYAYGD PP    IK GDTL+FD EL+
Sbjct:   36 PPPEYEVSAHYTGTIESGEKFDSSRDRGKPFTFQIGMGSVIKAWDIGFSSMTIGEKAILKCRADYAYGDSPPGSGVIKPGDTLLFDVELL 125
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BLAST of mRNA_P-wetherbeei_contig7970.1.1 vs. uniprot
Match: E4WYV9_OIKDI (Peptidylprolyl isomerase n=1 Tax=Oikopleura dioica TaxID=34765 RepID=E4WYV9_OIKDI)

HSP 1 Score: 115 bits (287), Expect = 2.980e-31
Identity = 56/92 (60.87%), Postives = 66/92 (71.74%), Query Frame = 1 
Query:   28 ELPPSGCEVTADYTGTLEDGTKFDSSRDRGKPFKFTLGEGNVIRGWDVGFATMRRGERALLKCRADYAYGDHPPPGDTIKAGDTLVFDAELI 303
            ++PP+G +V   YTGTL DG+KFDSSRDRGKPF+F LG+G VI+GWD G A M  G+RA L C  DYAYG    PG  I A  TLVFD EL+
Sbjct:   14 QIPPAGSKVQVHYTGTLTDGSKFDSSRDRGKPFEFVLGQGQVIKGWDEGVAQMSIGQRAKLTCSPDYAYGSRGFPG-LIPANSTLVFDVELL 104
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BLAST of mRNA_P-wetherbeei_contig7970.1.1 vs. uniprot
Match: FKB12_DROME (Peptidyl-prolyl cis-trans isomerase Fkbp12 n=45 Tax=Schizophora TaxID=43738 RepID=FKB12_DROME)

HSP 1 Score: 114 bits (286), Expect = 4.360e-31
Identity = 57/96 (59.38%), Postives = 66/96 (68.75%), Query Frame = 1 
Query:   16 GDDAELPPSGCEVTADYTGTLEDGTKFDSSRDRGKPFKFTLGEGNVIRGWDVGFATMRRGERALLKCRADYAYGDHPPPGDTIKAGDTLVFDAELI 303
            GD +  P +G +VT  YTGTL+DGTKFDSSRDR KPFKFT+G+G VIRGWD G A +  G+RA L C  DYAYG    PG  I    TL FD EL+
Sbjct:   11 GDGSTYPKNGQKVTVHYTGTLDDGTKFDSSRDRNKPFKFTIGKGEVIRGWDEGVAQLSVGQRAKLICSPDYAYGSRGHPG-VIPPNSTLTFDVELL 105
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BLAST of mRNA_P-wetherbeei_contig7970.1.1 vs. uniprot
Match: A0A6P6Y1T5_DERPT (Peptidylprolyl isomerase n=1 Tax=Dermatophagoides pteronyssinus TaxID=6956 RepID=A0A6P6Y1T5_DERPT)

HSP 1 Score: 114 bits (284), Expect = 8.790e-31
Identity = 56/96 (58.33%), Postives = 65/96 (67.71%), Query Frame = 1 
Query:   16 GDDAELPPSGCEVTADYTGTLEDGTKFDSSRDRGKPFKFTLGEGNVIRGWDVGFATMRRGERALLKCRADYAYGDHPPPGDTIKAGDTLVFDAELI 303
            G++   P +G  V   YTGTLEDG +FDSSRDRG+PFKF LG G VI+GWDVG A M  GERA L C  D+AYG H  PG  I    TL+FD EL+
Sbjct:   11 GNNVTFPKNGQNVVVHYTGTLEDGVRFDSSRDRGRPFKFRLGRGEVIKGWDVGVAQMSLGERARLICSPDFAYGSHGHPG-IIPPNATLIFDVELL 105
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BLAST of mRNA_P-wetherbeei_contig7970.1.1 vs. uniprot
Match: A0A1V9XJD7_9ACAR (Peptidylprolyl isomerase n=1 Tax=Tropilaelaps mercedesae TaxID=418985 RepID=A0A1V9XJD7_9ACAR)

HSP 1 Score: 114 bits (284), Expect = 9.050e-31
Identity = 58/97 (59.79%), Postives = 64/97 (65.98%), Query Frame = 1 
Query:   13 DGDDAELPPSGCEVTADYTGTLEDGTKFDSSRDRGKPFKFTLGEGNVIRGWDVGFATMRRGERALLKCRADYAYGDHPPPGDTIKAGDTLVFDAELI 303
            +GD +  P  G  V   YTGTL DGTKFDSSRDRGKPFKF +G+G VI+GWD G A M  GERA L C  DYAYG    PG  I    TL+FD ELI
Sbjct:   10 EGDGSTYPRKGQTVVVHYTGTLTDGTKFDSSRDRGKPFKFKIGKGEVIKGWDEGVAKMSVGERATLTCSPDYAYGSRGHPG-AIPPNATLIFDVELI 105
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BLAST of mRNA_P-wetherbeei_contig7970.1.1 vs. uniprot
Match: A0A7S2AW00_9STRA (Peptidylprolyl isomerase n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AW00_9STRA)

HSP 1 Score: 122 bits (306), Expect = 9.340e-31
Identity = 60/96 (62.50%), Postives = 74/96 (77.08%), Query Frame = 1 
Query:   19 DDAELPPSGCEVTADYTGTLE-DGTKFDSSRDRGKPFKFTLGEGNVIRGWDVGFATMRRGERALLKCRADYAYGDHPPPGDTIKAGDTLVFDAELI 303
            +DAE PP G  V A YTGT E DG+KFDSSRDR KPF FT+G+G+VI+ WD+GFA+M+ GE+A+LKCR+DYAYGD   P   I  G TL+FD EL+
Sbjct:   10 EDAESPPDGFSVRAHYTGTFESDGSKFDSSRDRNKPFVFTIGKGSVIKAWDLGFASMKVGEKAILKCRSDYAYGDSGSP-PKIPGGATLLFDVELL 104
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BLAST of mRNA_P-wetherbeei_contig7970.1.1 vs. uniprot
Match: W7TXZ2_9STRA (Peptidylprolyl isomerase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TXZ2_9STRA)

HSP 1 Score: 116 bits (290), Expect = 1.470e-30
Identity = 59/95 (62.11%), Postives = 69/95 (72.63%), Query Frame = 1 
Query:   22 DAELPPSGCEVTADYTGTLE-DGTKFDSSRDRGKPFKFTLGEGNVIRGWDVGFATMRRGERALLKCRADYAYGDHPPPGDTIKAGDTLVFDAELI 303
            + E PP G EV A YTGTLE DGT+FDSSR R +PFKFT+G G VI+GWD+GFATM+ GE A+LKCR DY YG+   P  TI    TL FD EL+
Sbjct:   28 EGESPPDGNEVVAHYTGTLESDGTEFDSSRKRNQPFKFTIGLGQVIKGWDLGFATMKVGEHAILKCREDYGYGESGSP-PTIPPKATLCFDVELL 121
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7970.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CK73_9STRA5.080e-3974.44Peptidylprolyl isomerase n=1 Tax=Tribonema minus T... [more]
A0A7S2V5G3_9STRA1.200e-3765.26Peptidylprolyl isomerase (Fragment) n=1 Tax=Fibroc... [more]
A0A7S4D6Y5_HETAK9.240e-3565.96Peptidylprolyl isomerase (Fragment) n=1 Tax=Hetero... [more]
D8LKW9_ECTSI9.070e-3465.56Peptidylprolyl isomerase n=1 Tax=Ectocarpus silicu... [more]
E4WYV9_OIKDI2.980e-3160.87Peptidylprolyl isomerase n=1 Tax=Oikopleura dioica... [more]
FKB12_DROME4.360e-3159.38Peptidyl-prolyl cis-trans isomerase Fkbp12 n=45 Ta... [more]
A0A6P6Y1T5_DERPT8.790e-3158.33Peptidylprolyl isomerase n=1 Tax=Dermatophagoides ... [more]
A0A1V9XJD7_9ACAR9.050e-3159.79Peptidylprolyl isomerase n=1 Tax=Tropilaelaps merc... [more]
A0A7S2AW00_9STRA9.340e-3162.50Peptidylprolyl isomerase n=2 Tax=Dictyocha speculu... [more]
W7TXZ2_9STRA1.470e-3062.11Peptidylprolyl isomerase n=1 Tax=Nannochloropsis g... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7970contigP-wetherbeei_contig7970:709..1011 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LKW9
PFAMsFKBP_C,Pro_isomerase,TPR_2,TPR_8
Model size303
Max annot lvl2759|Eukaryota
KEGG koko:K01802,ko:K09568
Hectar predicted targeting categoryother localisation
GOsGO:0000375,GO:0000377,GO:0000398,GO:0000413,GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0003676,GO:0003723,GO:0003727,GO:0003729,GO:0003755,GO:0003824,GO:0005488,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005684,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006283,GO:0006289,GO:0006355,GO:0006396,GO:0006397,GO:0006464,GO:0006725,GO:0006807,GO:0006810,GO:0006887,GO:0006950,GO:0006955,GO:0006974,GO:0008143,GO:0008144,GO:0008150,GO:0008152,GO:0008380,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0012505,GO:0016018,GO:0016070,GO:0016071,GO:0016192,GO:0016604,GO:0016607,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019219,GO:0019222,GO:0019538,GO:0030141,GO:0031323,GO:0031326,GO:0031410,GO:0031974,GO:0031981,GO:0031982,GO:0031983,GO:0032940,GO:0032991,GO:0033218,GO:0033554,GO:0034641,GO:0034774,GO:0036211,GO:0036230,GO:0042119,GO:0042277,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043299,GO:0043312,GO:0043412,GO:0043900,GO:0043902,GO:0043903,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044433,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0045055,GO:0045069,GO:0045070,GO:0045321,GO:0046483,GO:0046903,GO:0048518,GO:0048524,GO:0050789,GO:0050792,GO:0050794,GO:0050896,GO:0051171,GO:0051179,GO:0051234,GO:0051252,GO:0051716,GO:0060205,GO:0060255,GO:0065007,GO:0070013,GO:0070717,GO:0071007,GO:0071013,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097708,GO:0099503,GO:0101002,GO:0140096,GO:1901360,GO:1901363,GO:1901564,GO:1902494,GO:1903506,GO:1903900,GO:1903902,GO:1904813,GO:1990904,GO:2000112,GO:2001141
Exons1
Evalue1.03e-34
EggNOG OGsCOG0545@1|root,COG0652@1|root,KOG0543@2759|Eukaryota,KOG0865@2759|Eukaryota
EC5.2.1.8
Descriptionpeptidyl-prolyl cis-trans isomerase activity
Cds size300
COG categoryO
BRITEko00000,ko01000,ko03110
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187012.6551774-CDS-P-wetherbeei_contig7970:708..10081683187012.6551774-CDS-P-wetherbeei_contig7970:708..1008Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7970 709..1008 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187012.6679068-UTR-P-wetherbeei_contig7970:1008..10111683187012.6679068-UTR-P-wetherbeei_contig7970:1008..1011Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig7970 1009..1011 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7970.1.1prot_P-wetherbeei_contig7970.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7970 709..1008 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7970.1.1

>prot_P-wetherbeei_contig7970.1.1 ID=prot_P-wetherbeei_contig7970.1.1|Name=mRNA_P-wetherbeei_contig7970.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=100bp
MADDGDDAELPPSGCEVTADYTGTLEDGTKFDSSRDRGKPFKFTLGEGNV
IRGWDVGFATMRRGERALLKCRADYAYGDHPPPGDTIKAGDTLVFDAELI
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mRNA from alignment at P-wetherbeei_contig7970:709..1011-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7970.1.1 ID=mRNA_P-wetherbeei_contig7970.1.1|Name=mRNA_P-wetherbeei_contig7970.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=303bp|location=Sequence derived from alignment at P-wetherbeei_contig7970:709..1011- (Phaeothamnion wetherbeei SAG_119_79)
GAAATGGCGGACGACGGCGATGACGCTGAGCTTCCGCCGAGCGGCTGCGA
GGTCACCGCGGATTACACTGGAACCCTGGAGGACGGGACCAAGTTCGACT
CCTCGCGCGACCGCGGCAAGCCCTTCAAGTTCACGTTGGGCGAAGGCAAC
GTCATCCGCGGATGGGATGTCGGCTTTGCGACCATGCGACGCGGGGAGCG
GGCGCTCCTGAAGTGCAGGGCGGACTACGCGTACGGAGACCATCCGCCGC
CGGGGGACACCATCAAAGCAGGCGACACCCTCGTCTTCGACGCCGAGCTC
ATC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig7970:709..1011-

>mRNA_P-wetherbeei_contig7970.1.1 ID=mRNA_P-wetherbeei_contig7970.1.1|Name=mRNA_P-wetherbeei_contig7970.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=300bp|location=Sequence derived from alignment at P-wetherbeei_contig7970:709..1011- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCGGACGACGGCGATGACGCTGAGCTTCCGCCGAGCGGCTGCGAGGT
CACCGCGGATTACACTGGAACCCTGGAGGACGGGACCAAGTTCGACTCCT
CGCGCGACCGCGGCAAGCCCTTCAAGTTCACGTTGGGCGAAGGCAACGTC
ATCCGCGGATGGGATGTCGGCTTTGCGACCATGCGACGCGGGGAGCGGGC
GCTCCTGAAGTGCAGGGCGGACTACGCGTACGGAGACCATCCGCCGCCGG
GGGACACCATCAAAGCAGGCGACACCCTCGTCTTCGACGCCGAGCTCATC
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