mRNA_P-wetherbeei_contig7881.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7881.1.1
Unique NamemRNA_P-wetherbeei_contig7881.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig7881.1.1 vs. uniprot
Match: A0A836CK09_9STRA (Phosphoribosyltransferase-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK09_9STRA)

HSP 1 Score: 366 bits (940), Expect = 2.890e-125
Identity = 186/218 (85.32%), Postives = 199/218 (91.28%), Query Frame = 1 
Query:    1 QVFCGNANPALAKEIAAYLGINLGKLGASRFADGEVNVMVGENVRGKDVYVIQPTHMPVNENLVELLLMVSTMRRASARRITAVIPYYGYARQASLSAADRKMTARVPISAADVARLLEAMGVDRVVAVDLHCGQIQGFFGPRVPVDNLDAGVIGVQYFGDKDLHNPVIVSPDAGGVYRAKKFRDGLQAKFDIDANLAMIVKQRVKAGEVDRMDLVGA 654
            ++F GNANP LAKEIA+YLGINLGK+  +RFADGEVNVMV ENVRGKDVY+IQPT MPVNENLVELLLMVSTMRRASARRIT VIPYYGYARQ      DRKMTARVPISAADVARL+EAMGVDRVVAVDLHCGQIQGFFGPRVPVDNLD G+IGV YFGDKDLHNPV+VSPDAGGVYRAKKFR+GL AKFD+DA LAMIVKQR +A EVDRMDLVG+
Sbjct:   21 KIFSGNANPPLAKEIASYLGINLGKITVARFADGEVNVMVHENVRGKDVYLIQPTCMPVNENLVELLLMVSTMRRASARRITVVIPYYGYARQ------DRKMTARVPISAADVARLMEAMGVDRVVAVDLHCGQIQGFFGPRVPVDNLDGGIIGVGYFGDKDLHNPVVVSPDAGGVYRAKKFREGLAAKFDLDAGLAMIVKQRARANEVDRMDLVGS 232
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BLAST of mRNA_P-wetherbeei_contig7881.1.1 vs. uniprot
Match: D7FTL1_ECTSI (Pribosyltran_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTL1_ECTSI)

HSP 1 Score: 360 bits (923), Expect = 6.680e-121
Identity = 183/220 (83.18%), Postives = 198/220 (90.00%), Query Frame = 1 
Query:    1 QVFCGNANPALAKEIAAYLGINLGKLGASRFADGEVNVMVGENVRGKDVYVIQPTHMPVNENLVELLLMVSTMRRASARRITAVIPYYGYARQASLSAADRKMTARVPISAADVARLLEAMGVDRVVAVDLHCGQIQGFFGPRVPVDNLDAGVIGVQYFGDKDLHNPVIVSPDAGGVYRAKKFRDGLQAKFDIDANLAMIVKQRVKAGEVDRMDLVGADK 660
            ++F GNANPALAK+IAAYLGINLG++   RFADGEVNVMV ENVRGKDVY+IQPT MPVNENLVELLLMVSTMRR+SARRITAVIPYYGYARQ      DRKMTARVPISAADVARL+EAMGVDRVVAVDLHCGQIQGFFGPRVPVDNLD GVIGV YFGD DLHNPV+VSPDAGGVYRAKKFR+GL  ++ +DA LAMI+KQR KA EVDRMDLVG+ K
Sbjct:  146 KIFSGNANPALAKDIAAYLGINLGRVKVDRFADGEVNVMVKENVRGKDVYIIQPTCMPVNENLVELLLMVSTMRRSSARRITAVIPYYGYARQ------DRKMTARVPISAADVARLMEAMGVDRVVAVDLHCGQIQGFFGPRVPVDNLDGGVIGVGYFGDTDLHNPVVVSPDAGGVYRAKKFREGLAHRYGLDAGLAMIIKQRAKANEVDRMDLVGSVK 359
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BLAST of mRNA_P-wetherbeei_contig7881.1.1 vs. uniprot
Match: A0A4D9D5B0_9STRA (Pribosyltran_N domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D5B0_9STRA)

HSP 1 Score: 349 bits (895), Expect = 6.220e-118
Identity = 177/218 (81.19%), Postives = 192/218 (88.07%), Query Frame = 1 
Query:    1 QVFCGNANPALAKEIAAYLGINLGKLGASRFADGEVNVMVGENVRGKDVYVIQPTHMPVNENLVELLLMVSTMRRASARRITAVIPYYGYARQASLSAADRKMTARVPISAADVARLLEAMGVDRVVAVDLHCGQIQGFFGPRVPVDNLDAGVIGVQYFGDKDLHNPVIVSPDAGGVYRAKKFRDGLQAKFDIDANLAMIVKQRVKAGEVDRMDLVGA 654
            ++F GNAN  LA EIA  LG+NLGK+  SRFADGEVNVMV ENVRGKDVY++QPT  PVNENL+ELLLMVSTMRR+SARRITAVIPYYGYARQ      DRKM ARVPISAADVARLLEAMGVDRVVAVDLHCGQIQGFFGPRVPVDNLD G +GV YFGDKDLHNPVIVSPDAGGVYRAKKFR+GL  K+D+DA LAMI+KQR +A EVDRMDLVG+
Sbjct:   55 KLFSGNANTRLAAEIAGQLGMNLGKITVSRFADGEVNVMVHENVRGKDVYIVQPTCSPVNENLMELLLMVSTMRRSSARRITAVIPYYGYARQ------DRKMQARVPISAADVARLLEAMGVDRVVAVDLHCGQIQGFFGPRVPVDNLDGGTVGVSYFGDKDLHNPVIVSPDAGGVYRAKKFREGLAQKYDVDAGLAMIIKQRARANEVDRMDLVGS 266
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BLAST of mRNA_P-wetherbeei_contig7881.1.1 vs. uniprot
Match: A0A7S3DQJ5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DQJ5_9STRA)

HSP 1 Score: 326 bits (836), Expect = 3.910e-110
Identity = 165/218 (75.69%), Postives = 187/218 (85.78%), Query Frame = 1 
Query:    1 QVFCGNANPALAKEIAAYLGINLGKLGASRFADGEVNVMVGENVRGKDVYVIQPTHMPVNENLVELLLMVSTMRRASARRITAVIPYYGYARQASLSAADRKMTARVPISAADVARLLEAMGVDRVVAVDLHCGQIQGFFGPRVPVDNLDAGVIGVQYFGDKDLHNPVIVSPDAGGVYRAKKFRDGLQAKFDI-DANLAMIVKQRVKAGEVDRMDLVG 651
            +VF GN N ALA EI  +LGI+LGK    RFADGE N+++ ENVRGKDVYV+QPT  PVN+NL+ELLLMVST+RRASARRIT VIPYYGYARQ      DRKM ARVPISAADVARL+EA+GVDRV+AVDLHCGQIQGFFGPRVPVDNLD G++G+ YFG KDLHNPVIVSPDAGGVYRAKKF++GLQ K+D+ D  LAMIVKQR +AG VD+MDLVG
Sbjct:    6 KVFSGNGNMALALEITRHLGISLGKATVGRFADGECNIVIKENVRGKDVYVVQPTCPPVNDNLMELLLMVSTLRRASARRITVVIPYYGYARQ------DRKMQARVPISAADVARLMEAIGVDRVIAVDLHCGQIQGFFGPRVPVDNLDGGIVGLDYFGSKDLHNPVIVSPDAGGVYRAKKFKEGLQQKYDLQDLGLAMIVKQRARAGTVDQMDLVG 217
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BLAST of mRNA_P-wetherbeei_contig7881.1.1 vs. uniprot
Match: A0A7S2WN02_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WN02_9STRA)

HSP 1 Score: 330 bits (845), Expect = 6.970e-110
Identity = 165/220 (75.00%), Postives = 188/220 (85.45%), Query Frame = 1 
Query:    1 QVFCGNANPALAKEIAAYLGINLGKLGASRFADGEVNVMVGENVRGKDVYVIQPTHMPVNENLVELLLMVSTMRRASARRITAVIPYYGYARQASLSAADRKMTARVPISAADVARLLEAMGVDRVVAVDLHCGQIQGFFGPRVPVDNLDAGVIGVQYFGDKDLHNPVIVSPDAGGVYRAKKFRDGLQAKFDIDANLAMIVKQRVKAGEVDRMDLVGADK 660
            ++FCGNAN  LA+EIA  LG+ +G    S++ DGEVNVMV ENVRGKDVY++QPT  PVNENL+EL+LM+STMRRASARRITAVIPYYGYARQ      DRKMTARVPISAADVARLLEAMGVDRVVAVDLHCGQIQGFFGPRVPVDNLD G +GV YFG  +L NPV+VSPDAGGVYRAKKFR+GL  K+++ A LAMI+KQR K GE++RMDLVG+ K
Sbjct:   84 KLFCGNANKELAREIADQLGVEMGNATVSQYEDGEVNVMVHENVRGKDVYIVQPTCTPVNENLMELMLMISTMRRASARRITAVIPYYGYARQ------DRKMTARVPISAADVARLLEAMGVDRVVAVDLHCGQIQGFFGPRVPVDNLDGGTVGVHYFGQLNLKNPVVVSPDAGGVYRAKKFREGLAKKYNVQAGLAMIIKQRHKPGEIERMDLVGSVK 297
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BLAST of mRNA_P-wetherbeei_contig7881.1.1 vs. uniprot
Match: A0A7S2UW69_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UW69_9STRA)

HSP 1 Score: 329 bits (844), Expect = 1.540e-109
Identity = 165/217 (76.04%), Postives = 188/217 (86.64%), Query Frame = 1 
Query:    1 QVFCGNANPALAKEIAAYLGINLGKLGASRFADGEVNVMVGENVRGKDVYVIQPTHMPVNENLVELLLMVSTMRRASARRITAVIPYYGYARQASLSAADRKMTARVPISAADVARLLEAMGVDRVVAVDLHCGQIQGFFGPRVPVDNLDAGVIGVQYFGDKDLHNPVIVSPDAGGVYRAKKFRDGLQAKFDIDANLAMIVKQRVKAGEVDRMDLVG 651
            ++F G AN  LA EIA +LG+NLGK+  +RF+DGEVNV V ENVRGKDVY++QPT  P NENL+ELLLMVSTMRR+SA+RITAVIPYYGYARQ      DRKM ARVPISAADVARLLEAMGVDRV+AVDLHCGQIQGFFGPRVPVDNLD G+IGV YFGDK+L NPV+VSPDAGGVYRAKKFR+GL  K+++DA LAMI+KQR KA  V++MDLVG
Sbjct:  102 KIFSGQANRKLAIEIANHLGVNLGKIQVARFSDGEVNVQVNENVRGKDVYIVQPTCPPTNENLMELLLMVSTMRRSSAQRITAVIPYYGYARQ------DRKMQARVPISAADVARLLEAMGVDRVIAVDLHCGQIQGFFGPRVPVDNLDGGIIGVAYFGDKELQNPVVVSPDAGGVYRAKKFREGLAHKYEMDAGLAMIIKQRAKANAVEKMDLVG 312
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BLAST of mRNA_P-wetherbeei_contig7881.1.1 vs. uniprot
Match: A0A1E7FFF6_9STRA (Putative ribose-phosphate diphosphokinase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FFF6_9STRA)

HSP 1 Score: 324 bits (831), Expect = 1.160e-108
Identity = 161/218 (73.85%), Postives = 186/218 (85.32%), Query Frame = 1 
Query:    1 QVFCGNANPALAKEIAAYLGINLGKLGASRFADGEVNVMVGENVRGKDVYVIQPTHMPVNENLVELLLMVSTMRRASARRITAVIPYYGYARQASLSAADRKMTARVPISAADVARLLEAMGVDRVVAVDLHCGQIQGFFGPRVPVDNLDAGVIGVQYFGDKDLHNPVIVSPDAGGVYRAKKFRDGLQAKFDI-DANLAMIVKQRVKAGEVDRMDLVG 651
            ++F GN N AL+ EI  YLGINLGK    RFADGE N+++ ENVRGKD Y+IQPT  PVN+N++ELLLM+ST+RRASARRIT VIPYYGYARQ      DRKM ARVPISAADVARL+E+MGVDRV+AVDLHCGQIQGFFGPRVPVDNLD G++G+ YFG KDLHNPV+VSPDAGGVYRAKKF++GL  K+D+ D  LAMIVKQR +AG+VDRMDLVG
Sbjct:   23 KLFSGNGNLALSLEICRYLGINLGKATVGRFADGEANIVIHENVRGKDCYIIQPTCPPVNDNIMELLLMISTLRRASARRITVVIPYYGYARQ------DRKMQARVPISAADVARLIESMGVDRVIAVDLHCGQIQGFFGPRVPVDNLDGGIVGLDYFGSKDLHNPVVVSPDAGGVYRAKKFKEGLMHKYDMQDIGLAMIVKQRARAGKVDRMDLVG 234
[Close]
BLAST of mRNA_P-wetherbeei_contig7881.1.1 vs. uniprot
Match: A0A1Z5JZU2_FISSO (Ribose-phosphate pyrophosphokinase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JZU2_FISSO)

HSP 1 Score: 324 bits (831), Expect = 7.760e-107
Identity = 161/218 (73.85%), Postives = 188/218 (86.24%), Query Frame = 1 
Query:    1 QVFCGNANPALAKEIAAYLGINLGKLGASRFADGEVNVMVGENVRGKDVYVIQPTHMPVNENLVELLLMVSTMRRASARRITAVIPYYGYARQASLSAADRKMTARVPISAADVARLLEAMGVDRVVAVDLHCGQIQGFFGPRVPVDNLDAGVIGVQYFGDKDLHNPVIVSPDAGGVYRAKKFRDGLQAKFDI-DANLAMIVKQRVKAGEVDRMDLVG 651
            +VF GN N +L+ EIA +LGINLGK    RFADGEVN ++ ENVRGKDVY++QPT  PVN+N++ELLLM+ST+RRASARRIT VIPYYGYARQ      DRKM ARVPISAADVARL+EAMGVDRV+AVDLHCGQIQGFFGPRVPVDNLD G++G+ YFG KDLHNPV+VSPDAGGVYRAKKF++GL+ K+++ D  LAMIVKQR +AG VD+MDLVG
Sbjct:  156 KVFSGNGNMSLSLEIARHLGINLGKATVGRFADGEVNCVINENVRGKDVYIVQPTCPPVNDNIMELLLMISTLRRASARRITVVIPYYGYARQ------DRKMQARVPISAADVARLMEAMGVDRVIAVDLHCGQIQGFFGPRVPVDNLDGGIVGLDYFGCKDLHNPVVVSPDAGGVYRAKKFKEGLEQKYEMNDVGLAMIVKQRARAGAVDQMDLVG 367
[Close]
BLAST of mRNA_P-wetherbeei_contig7881.1.1 vs. uniprot
Match: A0A2P4YCE1_9STRA (Ribose-phosphate pyrophosphoKinase (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YCE1_9STRA)

HSP 1 Score: 316 bits (810), Expect = 1.720e-106
Identity = 160/218 (73.39%), Postives = 185/218 (84.86%), Query Frame = 1 
Query:    1 QVFCGNANPALAKEIAAYLGINLGKLGASRFADGEVNVMVGENVRGKDVYVIQPTHMPVNENLVELLLMVSTMRRASARRITAVIPYYGYARQASLSAADRKMTARVPISAADVARLLEAMGVDRVVAVDLHCGQIQGFFGPRVPVDNLDAGVIGVQYFGDKDLHNPVIVSPDAGGVYRAKKFRDGLQAKFDI-DANLAMIVKQRVKAGEVDRMDLVG 651
            ++F GNAN  LA  +A  +G+ LGK+   RFADGEVN+MV ENVRGKDVY++QPT +PVNENL+ELLLMVSTMRR+SARRITAVIPYYGYARQ      DRKM ARVPISAADVARLLEAMGVDRV+AVDLHCGQIQGFFGP VPVDNLD G++GV YFG+ +L NPV+VSPDAGGV RAKKFR+ L  K+ + +  LAMI+KQR+KAGE+DRMDLVG
Sbjct:   58 KIFSGNANHELAANVAKLVGVQLGKITVERFADGEVNLMVHENVRGKDVYIVQPTCVPVNENLMELLLMVSTMRRSSARRITAVIPYYGYARQ------DRKMAARVPISAADVARLLEAMGVDRVIAVDLHCGQIQGFFGPHVPVDNLDGGLVGVSYFGNHELVNPVVVSPDAGGVARAKKFREWLVGKYGLPNTGLAMIIKQRIKAGEIDRMDLVG 269
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BLAST of mRNA_P-wetherbeei_contig7881.1.1 vs. uniprot
Match: A0A7S4AMH1_9STRA (Hypothetical protein n=2 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AMH1_9STRA)

HSP 1 Score: 323 bits (828), Expect = 3.060e-106
Identity = 165/218 (75.69%), Postives = 184/218 (84.40%), Query Frame = 1 
Query:    1 QVFCGNANPALAKEIAAYLGINLGKLGASRFADGEVNVMVGENVRGKDVYVIQPTHMPVNENLVELLLMVSTMRRASARRITAVIPYYGYARQASLSAADRKMTARVPISAADVARLLEAMGVDRVVAVDLHCGQIQGFFGPRVPVDNLDAGVIGVQYFGDKDLHNPVIVSPDAGGVYRAKKFRDGLQAKFDI-DANLAMIVKQRVKAGEVDRMDLVG 651
            ++F GN N AL+ EI  YLGINLGK    RFADGE NV+V ENVRGKD YVIQPT  PVN+N++ELLLMVST+RRASARRIT VIPYYGYARQ      DRKM ARVPISAADVARL+EAMGVDRV+AVDLHCGQIQGFFGPRVPVDNLD G++G+ YFG KDLHNPV+VSPDAGGVYRAKKF++GL  K+D+ D  LAMIVKQR +AG VD MDLVG
Sbjct:  167 KLFSGNGNLALSLEICRYLGINLGKATVGRFADGEANVVVHENVRGKDCYVIQPTCPPVNDNIMELLLMVSTLRRASARRITVVIPYYGYARQ------DRKMQARVPISAADVARLIEAMGVDRVIAVDLHCGQIQGFFGPRVPVDNLDGGIVGLDYFGSKDLHNPVVVSPDAGGVYRAKKFKEGLMHKYDMQDIGLAMIVKQRARAGLVDTMDLVG 378
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7881.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CK09_9STRA2.890e-12585.32Phosphoribosyltransferase-like protein (Fragment) ... [more]
D7FTL1_ECTSI6.680e-12183.18Pribosyltran_N domain-containing protein n=2 Tax=E... [more]
A0A4D9D5B0_9STRA6.220e-11881.19Pribosyltran_N domain-containing protein n=2 Tax=M... [more]
A0A7S3DQJ5_9STRA3.910e-11075.69Hypothetical protein (Fragment) n=1 Tax=Amphiprora... [more]
A0A7S2WN02_9STRA6.970e-11075.00Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A7S2UW69_9STRA1.540e-10976.04Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A1E7FFF6_9STRA1.160e-10873.85Putative ribose-phosphate diphosphokinase n=1 Tax=... [more]
A0A1Z5JZU2_FISSO7.760e-10773.85Ribose-phosphate pyrophosphokinase n=2 Tax=Fistuli... [more]
A0A2P4YCE1_9STRA1.720e-10673.39Ribose-phosphate pyrophosphoKinase (Fragment) n=1 ... [more]
A0A7S4AMH1_9STRA3.060e-10675.69Hypothetical protein n=2 Tax=Pseudo-nitzschia aust... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7881contigP-wetherbeei_contig7881:297..2637 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FTL1
PFAMsPribosyl_synth,Pribosyltran_N
Model size660
Max annot lvl2759|Eukaryota
KEGG rclassRC00002,RC00078
KEGG koko:K00948,ko:K14638
KEGG TC2.A.17.3
KEGG ReactionR01049
KEGG Pathwayko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230
KEGG ModuleM00005
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009536,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464
Exons6
Evalue1.1e-121
EggNOG OGsCOG0462@1|root,KOG1448@2759|Eukaryota
Ec32 ortholog descriptionPhosphoribosyltransferase-like
Ec32 orthologEc-06_008650.1
EC2.7.6.1
Descriptionribose phosphate diphosphokinase activity
Cds size660
COG categoryEF
BiGG ReactioniRC1080.CRv4_Au5_s8_g15040_t1
BRITEko00000,ko00001,ko00002,ko01000,ko02000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7881.1.1prot_P-wetherbeei_contig7881.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7881 297..2637 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187006.5284238-CDS-P-wetherbeei_contig7881:296..4011683187006.5284238-CDS-P-wetherbeei_contig7881:296..401Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7881 297..401 +
1683187006.5399723-CDS-P-wetherbeei_contig7881:846..9481683187006.5399723-CDS-P-wetherbeei_contig7881:846..948Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7881 847..948 +
1683187006.549133-CDS-P-wetherbeei_contig7881:1325..14151683187006.549133-CDS-P-wetherbeei_contig7881:1325..1415Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7881 1326..1415 +
1683187006.567459-CDS-P-wetherbeei_contig7881:1628..17421683187006.567459-CDS-P-wetherbeei_contig7881:1628..1742Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7881 1629..1742 +
1683187006.5795324-CDS-P-wetherbeei_contig7881:2050..22091683187006.5795324-CDS-P-wetherbeei_contig7881:2050..2209Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7881 2051..2209 +
1683187006.5898764-CDS-P-wetherbeei_contig7881:2547..26371683187006.5898764-CDS-P-wetherbeei_contig7881:2547..2637Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7881 2548..2637 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7881.1.1

>prot_P-wetherbeei_contig7881.1.1 ID=prot_P-wetherbeei_contig7881.1.1|Name=mRNA_P-wetherbeei_contig7881.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=220bp
QVFCGNANPALAKEIAAYLGINLGKLGASRFADGEVNVMVGENVRGKDVY
VIQPTHMPVNENLVELLLMVSTMRRASARRITAVIPYYGYARQASLSAAD
RKMTARVPISAADVARLLEAMGVDRVVAVDLHCGQIQGFFGPRVPVDNLD
AGVIGVQYFGDKDLHNPVIVSPDAGGVYRAKKFRDGLQAKFDIDANLAMI
VKQRVKAGEVDRMDLVGADK
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mRNA from alignment at P-wetherbeei_contig7881:297..2637+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7881.1.1 ID=mRNA_P-wetherbeei_contig7881.1.1|Name=mRNA_P-wetherbeei_contig7881.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2341bp|location=Sequence derived from alignment at P-wetherbeei_contig7881:297..2637+ (Phaeothamnion wetherbeei SAG_119_79)
CAGGTGTTCTGCGGCAACGCAAACCCGGCGCTGGCGAAGGAGATAGCTGC
TTACCTTGGCATCAACCTCGGCAAGCTCGGAGCGTCTCGCTTCGCCGACG
GGGAGGTGGGCGAGTGATTAGTTTATTGAAGCGCCCTGTGCGACCACCCT
TTCTTGATCGGATTTCTTGCTCTTTAGTCAGTCGACTGCGACAGAATATT
ATTTGGTTGTGGCTAGTATTTGGTTGTGGGTTGTGCTGGTTCAAAGCGCC
ATTGCGCTCTAATGTATTGTTTCTTGGGGCCGTTTGTCTGACCTCTTTGT
TGTGTGGGGGGCTTTCCAGCTGCAGGGAACGGATTGACCGCCGAGCCTGA
AGGGTGCATGCGCCGCTTGGCTTTTACTTTAGAAATGCGCCGTGCCATCA
ACTGCAGTAGCGTAGTGTCGTGTTGCGACCGTTAAAGAGTGCCCGTCGTT
TTAACTCAAAGAGCAACTGCTGACTCTCTCACCTCTGGACGCTTCGGGGC
AACTTCCCCCTTACCGTACCATCGATCGATTGCTCTCGATTCGTCGACAG
GTGAACGTGATGGTGGGGGAGAACGTGCGGGGGAAGGACGTGTACGTCAT
CCAACCGACCCACATGCCAGTCAATGAAAACCTTGTGGAGCTCCTCCTTA
TGGTGCGTCAGAGTAATTTTGTGCGGGCGATTCCGGCGCCTCCTGCGAAG
TTAGTTTTAGCAGCTCCAGGGGCTCCGACGATTCCAGCGCCGGTAAACGG
TCGGAAGTTCGGGGGCCGATGGCAATGGAGCGGCGGGCTGCGTCACGGAC
GTGCGGGCGGCAGCACCTGCGGATGAACGGAACGAGCGGCCCGTAAAAGA
AAATAGCGGCCGACGGACGAGGGCACATAGGCAGTTTACAGAAAGAGCTT
GAAATGCTGATTGTGAGAGTTGAGTGGAGGTGCCTTTGTCTCATCCTCGT
TTCTGAGTTTCTTTCTTCTTTCTGGCTGACCTGTCGCATTTTTGCCTCTT
CCCTCCCGTGTTGCTTTTCCCTCCGACAGGTGTCGACGATGCGACGCGCC
TCGGCACGACGCATCACGGCCGTCATTCCGTATTATGGCTATGCACGCCA
GGCAAGTCTCTCCGCTGCCGTGACTTGTTCACTGCCGCTCCCGCCGCTGC
CGCCGCCGTCGCTTGCCCCGCTGCCTTTTATTTAAAGGTCGTTTCCTCAA
TCAGCACAATTGCCGGTCGCAGCGAAGCACTCACAGGTTTCGACATTGAT
TGTTGGGTTGTTCTTTGGGCGACTTTTGTTCCTGTCTTTTACATTTTTCT
CCCTTTTTCCTCTGCCTATCCCCCTCCGGCAGGACCGCAAGATGACGGCA
CGCGTGCCGATCTCGGCGGCGGACGTGGCACGGCTGCTGGAGGCGATGGG
GGTGGACCGCGTCGTCGCCGTCGACCTCCACTGCGGGCAGATCCAGGTAA
AGAAAATGGAGGAAGAGCAGAAAGGAGGAATTTCTCCGCGTCAGGGATGC
CGAGGGTCCTCTTGAAGTCGAATCGCAGGCATTTCTGCCGCATCTGCTGG
ATGCTTGGGCCACCACCTTCAACTGCATTCGTTCTTTAGAACCCGACTGC
TGACGCAGTCATCCGCTGCGCTGATCCGTTCCGTCTTCTGCTTCTTTCTG
CTGTTCCTTCCACTCCTCTTTCCACTTTTCCCCTTTGGCGCATTCTCTGT
CTCCGCTCCGCCGCCCGACTTGGCGCCAACCGTTCCCAAATCCATTTCCT
GCAGGGCTTCTTCGGGCCGCGGGTCCCCGTGGACAACCTGGACGCGGGCG
TGATCGGGGTGCAGTACTTCGGGGACAAGGACCTGCACAACCCCGTCATT
GTCAGTCCCGACGCCGGCGGTGTCTACCGCGCCAAGAAGTTCCGCGACGG
GCTCCAGGCCAAGGTGCGGTGCGGTGGTGCGGGAAATGGCGGTGCATGCG
TGCACCAATTTTGTGGGCGACTGGCATGCGGCAGCAGCGAACATTTGGTA
TGAGGTTGTTTGGGGTTTGTTGTTTGGGTTGTGTTGCGGGAGTTTTGTTG
CGGTTCCCGGCTACGCCTGCTGCCGGGGGCGGTTCCGTCCGTCAGAGGCC
AGCCTGTTTGGTCGGCACGGCTCTTGATGCTGCTAACGCCTCCTTCCTTG
TTCCCTCGCCTCCTTCCGCCTCACCGCGCGACGGTTTCGTTCTCTGCCGT
CTTCCCGGTCTTGTTTGACCTTTTGTTGATCTCCACCTTGCCGCGCGACA
GTTCGACATTGACGCGAATCTGGCCATGATCGTCAAGCAGCGGGTCAAGG
CCGGGGAGGTCGACCGAATGGACCTCGTCGGAGCCGACAAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig7881:297..2637+

>mRNA_P-wetherbeei_contig7881.1.1 ID=mRNA_P-wetherbeei_contig7881.1.1|Name=mRNA_P-wetherbeei_contig7881.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=660bp|location=Sequence derived from alignment at P-wetherbeei_contig7881:297..2637+ (Phaeothamnion wetherbeei SAG_119_79)
CAGGTGTTCTGCGGCAACGCAAACCCGGCGCTGGCGAAGGAGATAGCTGC
TTACCTTGGCATCAACCTCGGCAAGCTCGGAGCGTCTCGCTTCGCCGACG
GGGAGGTGAACGTGATGGTGGGGGAGAACGTGCGGGGGAAGGACGTGTAC
GTCATCCAACCGACCCACATGCCAGTCAATGAAAACCTTGTGGAGCTCCT
CCTTATGGTGTCGACGATGCGACGCGCCTCGGCACGACGCATCACGGCCG
TCATTCCGTATTATGGCTATGCACGCCAGGCAAGTCTCTCCGCTGCCGAC
CGCAAGATGACGGCACGCGTGCCGATCTCGGCGGCGGACGTGGCACGGCT
GCTGGAGGCGATGGGGGTGGACCGCGTCGTCGCCGTCGACCTCCACTGCG
GGCAGATCCAGGGCTTCTTCGGGCCGCGGGTCCCCGTGGACAACCTGGAC
GCGGGCGTGATCGGGGTGCAGTACTTCGGGGACAAGGACCTGCACAACCC
CGTCATTGTCAGTCCCGACGCCGGCGGTGTCTACCGCGCCAAGAAGTTCC
GCGACGGGCTCCAGGCCAAGTTCGACATTGACGCGAATCTGGCCATGATC
GTCAAGCAGCGGGTCAAGGCCGGGGAGGTCGACCGAATGGACCTCGTCGG
AGCCGACAAG
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