mRNA_P-wetherbeei_contig7878.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7878.1.2 vs. uniprot
Match: D8LUA8_ECTSI (Iron-sulfur clusters transporter atm1, mitochondrial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LUA8_ECTSI) HSP 1 Score: 370 bits (949), Expect = 2.400e-116 Identity = 197/283 (69.61%), Postives = 228/283 (80.57%), Query Frame = 2
Query: 479 SDDGSERENAGRILRTLAAHLWPSKEMQPDHAAIKARVALSLGLLVGAKLITIQVPFIFKHLVDGLTAVSPQIAESRVADM-AAAAGAATTDPMVAVPVALVLGYGVARSTAAGFQELRNAVFATVAQQAIRRVAVSVFEHLHQLDLSYHLQKNTGALSRIIDRGGRSIQFTLSSMVFNVFPTLLEISLVSGIVATQASWKYSMVCFGTIGAYVAYTLAITQWRTQFRKAMIKLENEAGAKVNDSLVNYETVKYFNNEAHESSRYDESMAGYQRAALKTQTSL 1324
+++ SER+NA RILRTLA HLWPSKE+Q DH +IKARV SL LL+GAKL+TIQVPFIFK LVD L S A + A A AG + + VAVPV++VLGYG+ARSTA+G QELRN VFA VAQ+AIRRV VFEHLH L L YHL+KNTG +SRIIDRGGRSIQ+TLS+M+FNV PT++EISLVSGI+A+QASWKYS VC TI Y AYT ITQWRT+FRK MI ENEA AKV DSLVNYETVKYFNNEAHE+SRYDES+ G+Q A++KTQTSL
Sbjct: 62 AEEASERDNAKRILRTLATHLWPSKELQADHVSIKARVVGSLALLLGAKLVTIQVPFIFKGLVDTLGETSRVAAAAAAATGDAVVAGGVSPEAAVAVPVSMVLGYGIARSTASGAQELRNVVFAVVAQRAIRRVGRDVFEHLHDLGLKYHLEKNTGTVSRIIDRGGRSIQYTLSAMLFNVLPTIVEISLVSGILASQASWKYSAVCCSTIVTYSAYTFGITQWRTKFRKQMIAQENEASAKVTDSLVNYETVKYFNNEAHEASRYDESLKGFQEASVKTQTSL 344
BLAST of mRNA_P-wetherbeei_contig7878.1.2 vs. uniprot
Match: A0A836CGR1_9STRA (Iron-sulfur clusters transporter atm1, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGR1_9STRA) HSP 1 Score: 368 bits (945), Expect = 5.770e-116 Identity = 191/281 (67.97%), Postives = 225/281 (80.07%), Query Frame = 2
Query: 482 DDGSERENAGRILRTLAAHLWPSKEMQPDHAAIKARVALSLGLLVGAKLITIQVPFIFKHLVDGLTAVSPQIAESRVADMAAAAGAATTDPMVAVPVALVLGYGVARSTAAGFQELRNAVFATVAQQAIRRVAVSVFEHLHQLDLSYHLQKNTGALSRIIDRGGRSIQFTLSSMVFNVFPTLLEISLVSGIVATQASWKYSMVCFGTIGAYVAYTLAITQWRTQFRKAMIKLENEAGAKVNDSLVNYETVKYFNNEAHESSRYDESMAGYQRAALKTQTSL 1324
D ERE A RIL+TL+AH+WPSKE+ DH +IKARV +SL LLV +KL+TIQVPFIFK+LVD L +V P AA A DP AVP+ALVLGYG+ARSTA+GFQELR +FATVAQ+AIRRV+ +F H+H LDL +HL KNTG L+R IDRGGRSIQ+TL+SMVFNV P +LEI LVSGI+ +QASW YS VCFGTIGAY AYT+A+TQWRT+FRK MI+LENEA AKV DSLVNYETVK+FNNE HE++RYD+S+ GYQ AALKT TSL
Sbjct: 84 DQKGEREVALRILKTLSAHIWPSKEVTKDHVSIKARVGISLTLLVASKLVTIQVPFIFKNLVDNLNSVDP-----------AATAAVAADPWTAVPIALVLGYGLARSTASGFQELRTTIFATVAQRAIRRVSRDIFMHIHALDLQFHLAKNTGVLTRTIDRGGRSIQYTLNSMVFNVVPMVLEIGLVSGILLSQASWHYSAVCFGTIGAYAAYTVAVTQWRTKFRKDMIRLENEASAKVTDSLVNYETVKFFNNEEHEANRYDKSLEGYQHAALKTGTSL 353
BLAST of mRNA_P-wetherbeei_contig7878.1.2 vs. uniprot
Match: A0A7S4DCW5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DCW5_HETAK) HSP 1 Score: 333 bits (855), Expect = 6.740e-103 Identity = 170/271 (62.73%), Postives = 212/271 (78.23%), Query Frame = 2
Query: 512 RILRTLAAHLWPSKEMQPDHAAIKARVALSLGLLVGAKLITIQVPFIFKHLVDGLTAVSPQIAESRVADMAAAAGAATTDPMVAVPVALVLGYGVARSTAAGFQELRNAVFATVAQQAIRRVAVSVFEHLHQLDLSYHLQKNTGALSRIIDRGGRSIQFTLSSMVFNVFPTLLEISLVSGIVATQASWKYSMVCFGTIGAYVAYTLAITQWRTQFRKAMIKLENEAGAKVNDSLVNYETVKYFNNEAHESSRYDESMAGYQRAALKTQTSL 1324
RIL+TL H+WP ++ DH +IK+RVA SLGLL+GAKLITIQVPFIFK LVD L+A+ P D+AA A DP+V PVAL LGYGVAR++A+GFQELRNAVF++VAQQAIR+V+ +VFEHLH LDL +HL +NTGALSR+IDRGGRSI +TLS+ +FNV PTL EI LVS I+ + Y+ FGTIGAY+ YT+ +T+WRT FRK+M++ EN+A +K DSL+NYETVKYFNNE HE RY++++ YQRAALKTQTSL
Sbjct: 91 RILKTLFTHIWPDSKLNSDHFSIKSRVAGSLGLLIGAKLITIQVPFIFKELVDQLSAIPP--------DVAAGLTAGAADPVVTFPVALALGYGVARASASGFQELRNAVFSSVAQQAIRKVSANVFEHLHNLDLQFHLDRNTGALSRVIDRGGRSINYTLSATIFNVAPTLFEIGLVSSILTAKFGPAYAATTFGTIGAYIYYTVKVTEWRTDFRKSMLRAENDASSKAIDSLINYETVKYFNNEGHERERYEKNLKEYQRAALKTQTSL 353
BLAST of mRNA_P-wetherbeei_contig7878.1.2 vs. uniprot
Match: A0A6H5J9G7_9PHAE (ABC transmembrane type-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9G7_9PHAE) HSP 1 Score: 322 bits (824), Expect = 7.980e-101 Identity = 179/283 (63.25%), Postives = 206/283 (72.79%), Query Frame = 2
Query: 479 SDDGSERENAGRILRTLAAHLWPSKEMQPDHAAIKARVALSLGLLVGAKLITIQVPFIFKHLVDGLTAVSPQIAESRVADM-AAAAGAATTDPMVAVPVALVLGYGVARSTAAGFQELRNAVFATVAQQAIRRVAVSVFEHLHQLDLSYHLQKNTGALSRIIDRGGRSIQFTLSSMVFNVFPTLLEISLVSGIVATQASWKYSMVCFGTIGAYVAYTLAITQWRTQFRKAMIKLENEAGAKVNDSLVNYETVKYFNNEAHESSRYDESMAGYQRAALKTQTSL 1324
+++ SER+NA RIL TLA HLWPSKE+Q DH +IKARV SL LL+GAKL+TIQVPFIFK LVD L S A + A A AG + + VAVP+++VLGYG+ARSTA+G QELRN VFA VAQ+AIRRV VFEHLH L L YHL+KNTG +SRIIDRGG LVSGI+A+QASWKYS VC TI Y AYT ITQWRT+FRK MI ENEA AKV DSLVNYETVKYFNNEAHE+SRYDES+ G+Q A++KTQTSL
Sbjct: 192 AEEASERDNAKRILMTLATHLWPSKELQADHVSIKARVVGSLALLLGAKLVTIQVPFIFKDLVDTLGETSRAAAATAAATGDAVVAGGVSPEAAVAVPMSMVLGYGIARSTASGAQELRNVVFAVVAQRAIRRVGRDVFEHLHDLGLQYHLEKNTGTVSRIIDRGG----------------------LVSGILASQASWKYSAVCCSTIVTYSAYTFGITQWRTKFRKQMIAQENEASAKVTDSLVNYETVKYFNNEAHEASRYDESLKGFQEASVKTQTSL 452
BLAST of mRNA_P-wetherbeei_contig7878.1.2 vs. uniprot
Match: W7TLP4_9STRA (Abc transporter b family protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TLP4_9STRA) HSP 1 Score: 306 bits (784), Expect = 7.890e-93 Identity = 159/278 (57.19%), Postives = 204/278 (73.38%), Query Frame = 2
Query: 491 SERENAGRILRTLAAHLWPSKEMQPDHAAIKARVALSLGLLVGAKLITIQVPFIFKHLVDGLTAVSPQIAESRVADMAAAAGAATTDPMVAVPVALVLGYGVARSTAAGFQELRNAVFATVAQQAIRRVAVSVFEHLHQLDLSYHLQKNTGALSRIIDRGGRSIQFTLSSMVFNVFPTLLEISLVSGIVATQASWKYSMVCFGTIGAYVAYTLAITQWRTQFRKAMIKLENEAGAKVNDSLVNYETVKYFNNEAHESSRYDESMAGYQRAALKTQTSL 1324
+ER RIL+TL HLWPS + PD A++KARV LS+GLLV +KLITIQVPF+FK +VD L V P A VA+P++L++GYGVAR+TA FQELRNAVFATVAQ+AIR+V+ F HLH L+L +HL ++TGA+SR+IDRGGRSI F LS+++FN+ PT LE+ LV+ I++ Q WK++ V GT+GAY +T+ ITQWRTQFRK M+++ENEA K DSL+NYETVKYF NE HE+ RYD+S+ +Q A LKTQTSL
Sbjct: 16 NERARNLRILKTLGRHLWPSTSLHPDAASLKARVVLSMGLLVSSKLITIQVPFLFKDIVDKLN-VPPD---------------AFLTGAVALPLSLLVGYGVARTTATAFQELRNAVFATVAQKAIRKVSRDAFVHLHDLELDFHLNRSTGAVSRVIDRGGRSINFVLSALLFNIVPTALEMGLVAYILSVQCGWKHAGVALGTVGAYTVFTILITQWRTQFRKDMVRIENEASGKAVDSLLNYETVKYFGNEEHEADRYDQSLRDFQEAGLKTQTSL 277
BLAST of mRNA_P-wetherbeei_contig7878.1.2 vs. uniprot
Match: A0A4D9D003_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D003_9STRA) HSP 1 Score: 306 bits (784), Expect = 2.010e-91 Identity = 161/291 (55.33%), Postives = 208/291 (71.48%), Query Frame = 2
Query: 452 RKLKAAAGASDDGSERENAGRILRTLAAHLWPSKEMQPDHAAIKARVALSLGLLVGAKLITIQVPFIFKHLVDGLTAVSPQIAESRVADMAAAAGAATTDPMVAVPVALVLGYGVARSTAAGFQELRNAVFATVAQQAIRRVAVSVFEHLHQLDLSYHLQKNTGALSRIIDRGGRSIQFTLSSMVFNVFPTLLEISLVSGIVATQASWKYSMVCFGTIGAYVAYTLAITQWRTQFRKAMIKLENEAGAKVNDSLVNYETVKYFNNEAHESSRYDESMAGYQRAALKTQTSL 1324
R+ + G +ER RIL+TL HLWPS + PD A++KARV LS+GLLV +KLITIQVPF+FK +VD L V P A VA+P++L++GYGVAR+TA FQELRNAVFATVAQ+AIR+V+ F HLH L+L +HL ++TGA+SR+IDRGGRSI F LS+++FN+ PT LE+ LV+ I++ Q WK++ V GT+GAY +T+ ITQWRTQFRK M+++ENEA K DSL+NYETVKYF NE HE+ RYD+S+ +Q A LKTQTSL
Sbjct: 20 RRSQPLKGEKSSQNERARNLRILKTLGRHLWPSTSLHPDAASLKARVVLSMGLLVSSKLITIQVPFLFKDIVDKLN-VPPD---------------AFLTGAVALPLSLLIGYGVARTTATAFQELRNAVFATVAQKAIRKVSRDAFIHLHDLELDFHLNRSTGAVSRVIDRGGRSINFVLSALLFNIVPTALEMGLVAYILSVQCGWKHAGVALGTVGAYTVFTILITQWRTQFRKDMVRIENEASGKAVDSLLNYETVKYFGNEEHEADRYDQSLREFQEAGLKTQTSL 294
BLAST of mRNA_P-wetherbeei_contig7878.1.2 vs. uniprot
Match: A0A7S1YV57_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YV57_9STRA) HSP 1 Score: 290 bits (741), Expect = 1.280e-89 Identity = 160/290 (55.17%), Postives = 205/290 (70.69%), Query Frame = 2
Query: 473 GASDDGSERENAGRILRTLAAHLWPS------KEMQPDHAAIKARVALSLGLLVGAKLITIQVPFIFKHLVDGLTAVSPQIAESRVADMAAAAGAATTDPMVAVPVALVLGYGVARSTAAGFQELRNAVFATVAQQAIRRVAVSVFEHLHQLDLSYHLQKNTGALSRIIDRGGRSIQFTLSSMVFNVFPTLLEISLVSGIVATQASWKYSMVCFGTIGAYVAYTLAITQWRTQFRKAMIKLENEAGAKVNDSLVNYETVKYFNNEAHESSRYDESMAGYQRAALKTQTSL 1324
G D SE E RI +TLA H+WP+ +E + +K RV SLGL+ G KL+TIQVPF+FK+LVD L Q A VA + AA+ + VP++LV+GYGV+R+ A+G QELRNAVFA VAQ AIRRV VF H+H LD+S+HL +NTG LSR++DRG RSI F L++MVFN+ PT LE+++V+G++A ++ V TIGAY AYT+ ITQWRTQFR+ M +LENEA +KV DSL+NYETVKYFNNE HE RY++S+ GYQ+AALK QTSL
Sbjct: 85 GIKSDMSEAEQQKRIAKTLAKHVWPTITNDMDEESKAHAKRLKRRVIASLGLMAGGKLVTIQVPFLFKYLVDSLPL---QTATVDVATIDAAS-------LGFVPLSLVVGYGVSRAAASGMQELRNAVFAHVAQDAIRRVGRQVFNHVHSLDMSFHLNRNTGTLSRVLDRGNRSISFVLNAMVFNIVPTTLEVAVVTGLMAHHFGPTHAGVVLSTIGAYTAYTVGITQWRTQFRRDMNRLENEASSKVVDSLLNYETVKYFNNELHEVDRYEDSLGGYQKAALKAQTSL 364
BLAST of mRNA_P-wetherbeei_contig7878.1.2 vs. uniprot
Match: A0A1V9YW57_9STRA (ATP-binding Cassette (ABC) Superfamily n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YW57_9STRA) HSP 1 Score: 282 bits (722), Expect = 1.490e-86 Identity = 155/270 (57.41%), Postives = 188/270 (69.63%), Query Frame = 2
Query: 515 ILRTLAAHLWPSKEMQPDHAAIKARVALSLGLLVGAKLITIQVPFIFKHLVDGLTAVSPQIAESRVADMAAAAGAATTDPMVAVPVALVLGYGVARSTAAGFQELRNAVFATVAQQAIRRVAVSVFEHLHQLDLSYHLQKNTGALSRIIDRGGRSIQFTLSSMVFNVFPTLLEISLVSGIVATQASWKYSMVCFGTIGAYVAYTLAITQWRTQFRKAMIKLENEAGAKVNDSLVNYETVKYFNNEAHESSRYDESMAGYQRAALKTQTSL 1324
I+ +LA +LWPS + P+ K+RV LSLGLLV AKLI IQVPFIFK LVD + +P++A VA+PV+LVLGYG+ R +A FQELRNA+FA VA IR+VA +VFEHLH LDL +HL + TGALSR IDRG RSI F L SM+FNV PT LEI LVS I+A Q W+Y+ V T+ AY +T+ +TQWRT+ R+ M KLENEAG KV DSL+NYETVKYFNNE HE+ RYD + YQ A+L TQTSL
Sbjct: 56 IVSSLAGYLWPSGD-SPEARGTKSRVVLSLGLLVSAKLINIQVPFIFKDLVDVMGTATPEVA-------------------VALPVSLVLGYGLGRFSANAFQELRNAIFAKVAHGTIRQVARNVFEHLHGLDLKFHLDRQTGALSRTIDRGSRSIDFVLRSMLFNVAPTALEIGLVSSIMAHQFGWEYAAVALSTLTAYTGFTVGVTQWRTEIRRRMNKLENEAGGKVIDSLMNYETVKYFNNEKHEADRYDNVLRAYQDASLITQTSL 305
BLAST of mRNA_P-wetherbeei_contig7878.1.2 vs. uniprot
Match: A0A6V2Q6L2_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2Q6L2_9STRA) HSP 1 Score: 290 bits (741), Expect = 7.510e-86 Identity = 160/290 (55.17%), Postives = 205/290 (70.69%), Query Frame = 2
Query: 473 GASDDGSERENAGRILRTLAAHLWPS------KEMQPDHAAIKARVALSLGLLVGAKLITIQVPFIFKHLVDGLTAVSPQIAESRVADMAAAAGAATTDPMVAVPVALVLGYGVARSTAAGFQELRNAVFATVAQQAIRRVAVSVFEHLHQLDLSYHLQKNTGALSRIIDRGGRSIQFTLSSMVFNVFPTLLEISLVSGIVATQASWKYSMVCFGTIGAYVAYTLAITQWRTQFRKAMIKLENEAGAKVNDSLVNYETVKYFNNEAHESSRYDESMAGYQRAALKTQTSL 1324
G D SE E RI +TLA H+WP+ +E + +K RV SLGL+ G KL+TIQVPF+FK+LVD L Q A VA + AA+ + VP++LV+GYGV+R+ A+G QELRNAVFA VAQ AIRRV VF H+H LD+S+HL +NTG LSR++DRG RSI F L++MVFN+ PT LE+++V+G++A ++ V TIGAY AYT+ ITQWRTQFR+ M +LENEA +KV DSL+NYETVKYFNNE HE RY++S+ GYQ+AALK QTSL
Sbjct: 85 GIKSDMSEAEQQKRIAKTLAKHVWPTITNDMDEESKAHAKRLKRRVIASLGLMAGGKLVTIQVPFLFKYLVDSLPL---QTATVDVATIDAAS-------LGFVPLSLVVGYGVSRAAASGMQELRNAVFAHVAQDAIRRVGRQVFNHVHSLDMSFHLNRNTGTLSRVLDRGNRSISFVLNAMVFNIVPTTLEVAVVTGLMAHHFGPTHAGVVLSTIGAYTAYTVGITQWRTQFRRDMNRLENEASSKVVDSLLNYETVKYFNNELHEVDRYEDSLGGYQKAALKAQTSL 364
BLAST of mRNA_P-wetherbeei_contig7878.1.2 vs. uniprot
Match: A0A067CWK0_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CWK0_SAPPC) HSP 1 Score: 286 bits (732), Expect = 1.130e-85 Identity = 161/292 (55.14%), Postives = 197/292 (67.47%), Query Frame = 2
Query: 467 AAGASDDGSEREN------AGRILRTLAAHLWPSKEMQPDHAAIKARVALSLGLLVGAKLITIQVPFIFKHLVDGLTAVSPQIAESRVADMAAAAGAATTDPMVAVPVALVLGYGVARSTAAGFQELRNAVFATVAQQAIRRVAVSVFEHLHQLDLSYHLQKNTGALSRIIDRGGRSIQFTLSSMVFNVFPTLLEISLVSGIVATQASWKYSMVCFGTIGAYVAYTLAITQWRTQFRKAMIKLENEAGAKVNDSLVNYETVKYFNNEAHESSRYDESMAGYQRAALKTQTSL 1324
AAG + D +E + I+ +LA +LWP + A+K RVALSLG+LV AKLI IQVPF+FK LVD + SP++A A+PV+LVLGYG+ R +A FQELRNA+FA VAQ IR+VA +VFEHLH LDL +HL + TGALSR IDRG RSI F L SM+FNV PT LEI LVS I+A Q W+Y+ V GT+ AY +T+ +TQWRT+ R+ M KLENEAG KV DSL+NYETVKYFNNE HE+ RYD + YQ A+LKTQTSL
Sbjct: 31 AAGLATDAKSKEQTPVPVTSKEIVTSLAGYLWPEGN-GAEARAVKGRVALSLGMLVSAKLINIQVPFLFKELVDVMGTTSPEVA-------------------AALPVSLVLGYGLGRFSANAFQELRNAIFAKVAQGTIRQVARNVFEHLHGLDLKFHLDRQTGALSRTIDRGSRSIDFVLRSMLFNVAPTALEIGLVSSIMAYQFGWEYAAVTLGTLTAYTGFTVGVTQWRTEIRRRMNKLENEAGGKVIDSLMNYETVKYFNNEKHEADRYDVVLRNYQDASLKTQTSL 302 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7878.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7878.1.2 >prot_P-wetherbeei_contig7878.1.2 ID=prot_P-wetherbeei_contig7878.1.2|Name=mRNA_P-wetherbeei_contig7878.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=414bp MRRLPFPHAVRFQYRVQARPSSPPNLRVPTTARRRPDDGEMSGGRAFVSTback to top mRNA from alignment at P-wetherbeei_contig7878:2..2882- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7878.1.2 ID=mRNA_P-wetherbeei_contig7878.1.2|Name=mRNA_P-wetherbeei_contig7878.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2881bp|location=Sequence derived from alignment at P-wetherbeei_contig7878:2..2882- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7878:2..2882- >mRNA_P-wetherbeei_contig7878.1.2 ID=mRNA_P-wetherbeei_contig7878.1.2|Name=mRNA_P-wetherbeei_contig7878.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1242bp|location=Sequence derived from alignment at P-wetherbeei_contig7878:2..2882- (Phaeothamnion wetherbeei SAG_119_79)back to top |