mRNA_P-wetherbeei_contig7866.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7866.1.2 vs. uniprot
Match: A0A6H5KTE9_9PHAE (Exonuclease 1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTE9_9PHAE) HSP 1 Score: 132 bits (332), Expect = 9.610e-30 Identity = 110/377 (29.18%), Postives = 152/377 (40.32%), Query Frame = 3
Query: 6 VRVTRRMAAQVQSALRAEGFETIVAPYEADAQVAYLCKIGLASAIITEDSDILVYLMAAGIAADVTVLYKLDRYGNARALRLDCSKGPTTTLAAAIEACPRSKPAGGGSDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRSRGNSGVRRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGNGKSGRKAAIGLLDKLHHFGGPGGGRRFVQMCVLSGCDYLSNVKSVGPVRAADSVIRYASDPAETRIESIVETWTREGRPA---PPGFVESAARAEASFFFHHVFDPRERRCVHFCEPGGNSGGXXXXXXXXXXXXXXXXTVIYQEDDDFAEAPDFAALGDPSLFLGDSIGAEDALRVASGVLDPVTLEPV 1127
+ VTR+M SAL+ EG E +V+PYEADAQVA+L K LASA+ITEDSDILVY+ A + + VLYK+D +G + L D K ++L I GK GR +I F G GGGR FVQ+ L+GCDY+ N++ +G + A V ++ A+ R+ I+ + G+ A P G E AE SFF+H V+DPR ++CVHFCE G A+ P + + FLG+ I E + ++ G +DPVT E V
Sbjct: 134 IHVTRQMVTNAMSALKREGVECMVSPYEADAQVAFLVKSDLASAVITEDSDILVYM--AAVKSTAPVLYKMDEFGTCKELGFDPEK--LSSLPGVI-------------------------------------------------------------------------------------------GKFGRGLSI--------FSGEGGGRSFVQLAALAGCDYVDNIRGLGLLTALPIVTKFRRTLADKRVSHILMHVQKMGKTATSIPTGHRERMHLAEMSFFWHRVYDPRTKKCVHFCEAAPELMGT-------------------------ADVPALPSTAGGTAFLGEPIEDEMMVNISRGNVDPVTGEAV 382
BLAST of mRNA_P-wetherbeei_contig7866.1.2 vs. uniprot
Match: D8LF34_ECTSI (Exonuclease 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF34_ECTSI) HSP 1 Score: 119 bits (299), Expect = 1.930e-26 Identity = 96/329 (29.18%), Postives = 130/329 (39.51%), Query Frame = 3
Query: 6 VRVTRRMAAQVQSALRAEGFETIVAPY-----------------------------EADAQVAYLCKIGLASAIITEDSDILVYLMAAGIAADVTVLYKLDRYGNARALRLDCSKGPTTTLAAAIEACPRSKPAGGGSDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRSRGNSGVRRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGNGKSGRKAAIGLLDKLHHFGGPGGGRRFVQMCVLSGCDYLSNVKSVGPVRAADSVIRYASDPAETRIESIVETWTREGRPAPPGFVESAARAEASFFFHHVFDPRERRCVHFCE 905
+ VTR+M SAL+ EG E +V+PY EADAQVAYL K GLASA+ITEDSDILVY+ A + + VLYK+D +G + L D K ++L I GK GR +I F G GGGR FVQ+ L+GCDY+ N++ +G + A V ++ PA+ R+ I+ + G+ P G + AE SFF+H V+DPR ++CVHFCE
Sbjct: 134 IHVTRQMVTNAMSALKREGVECMVSPYANGPSTKQAHPCVANDPHYGNQVGFFFFTEADAQVAYLVKSGLASAVITEDSDILVYM--AAVKSTAPVLYKMDEFGTCKELGFDPEK--LSSLPGVI-------------------------------------------------------------------------------------------GKFGRGLSI--------FSGEGGGRSFVQLAALAGCDYVDNIRGLGLLTALPIVTKFRRTPADKRVSHILMHVQKMGKTIPTGHRDRMHLAEMSFFWHRVYDPRTKKCVHFCE 359
BLAST of mRNA_P-wetherbeei_contig7866.1.2 vs. uniprot
Match: A0A6G0XUA1_9STRA (XPGI domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XUA1_9STRA) HSP 1 Score: 100 bits (248), Expect = 2.190e-19 Identity = 97/367 (26.43%), Postives = 135/367 (36.78%), Query Frame = 3
Query: 6 VRVTRRMAAQVQSALRAEGFETIVAPYEADAQVAYLCKIGLASAIITEDSDILVYLMAAGIAADVTVLYKLDRYGNARALRLDCSKGPTTTLAAAIEAC-PRSKPAGGGSDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRSRGNSGVRRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGNGKSGRKAAIGLLDKLHHF--GGPGGGRRFVQMCVLSGCDYLSNVKSVGPVRAADSVIRYASDPAETRIESIVETWTREGRPAPPGFVESAARAEASFFFHHVFDPRERRCVHFCEPGGNSGGXXXXXXXXXXXXXXXXTVIYQEDDDFAEAPDFAALG---DPSLFLGDSIGAEDALRV 1088
V +T + A +Q+ LR EG E + AP+EADAQ+ YLCKI ASAIITEDSDILVY M A I++ + L ++D G + + + + AC P SK A L KL HF R FVQMCVLSGCD+L ++ ++GPV A + + P R++ I+ + P + + RAEA F+ H+VF+P+ +R T D DFA D AL D + FLG + ++ L V
Sbjct: 30 VNITSDIIAALQATLRTEGVEFVTAPFEADAQMVYLCKINAASAIITEDSDILVYSMTANISSPI--LLRMDTTGACKMVSREI-----------LRACGPTSKSA--------------------------------------------------------------------------------------------FLKKLPHFLDSTVDSIRMFVQMCVLSGCDFLDSLPNIGPVTAQKHIFAFRGAPGHLRVKRILAKLRLDKVSVPADYFDQFCRAEALFYHHYVFNPQTQR-----------------------------TEFLVNDSDFAMISDIHALACSSDATAFLGQVLPPDEMLAV 262
BLAST of mRNA_P-wetherbeei_contig7866.1.2 vs. uniprot
Match: A0A485LP15_9STRA (Aste57867_23972 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LP15_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 5.120e-17 Identity = 82/293 (27.99%), Postives = 116/293 (39.59%), Query Frame = 3
Query: 6 VRVTRRMAAQVQSALRAEGFETIVAPYEADAQVAYLCKIGLASAIITEDSDILVYLMAAGIAADVTVLYKLDRYGNARALRLDC-SKGPTTTLAAAIEACPRSKPAGGGSDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRSRGNSGVRRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGNGKSGRKAAIGLLDKLHHF--GGPGGGRRFVQMCVLSGCDYLSNVKSVGPVRAADSVIRYASDPAETRIESIVETWTREGRPAPPGFVESAARAEASFFFHHVFDP 875
V++T + VQ ALRA + + AP+EADAQ+ YLCK+ ASAIITEDSDILVY + A I+ V +L +LD G + D SK T A++ ++ L KL HF G R FVQMCVLSGCD+L ++ +VGPV A + + P RI+ ++ T + P +++ RAEA F+ H++F+P
Sbjct: 133 VKITSAIIEAVQLALRAGSIDFVTAPFEADAQMVYLCKVQKASAIITEDSDILVYSITANIS--VPILLRLDTTGTCKVDASDMVSKDILKTHASSSKST--------------------------------------------------------------------------------------------------FLKKLPHFLDGTVDSIRMFVQMCVLSGCDFLESLPNVGPVTAQKHIFAFRGAPGGLRIKRLLAKLTLDRVAVPADYLDRFCRAEALFYHHYIFNP 325
BLAST of mRNA_P-wetherbeei_contig7866.1.2 vs. uniprot
Match: A0A024TQP6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TQP6_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 2.430e-16 Identity = 80/301 (26.58%), Postives = 116/301 (38.54%), Query Frame = 3
Query: 6 VRVTRRMAAQVQSALRAEGFETIVAPYEADAQVAYLCKIGLASAIITEDSDILVYLMAAGIAADVTVLYKLDRYGNARALRLDCSKGPTTTLAAAIEACPRSKPAGGGSDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRSRGNSGVRRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGNGKSGRKAAIGLLDKLHHF--GGPGGGRRFVQMCVLSGCDYLSNVKSVGPVRAADSVIRYASDPAETRIESIVETWTREGRPA--PPGFVESAARAEASFFFHHVFDPRERRCVH 896
V+VT + V +ALRA + ++AP+EADAQ+ YLCK+ ASAIITEDSDILVY + A +A + L+LD G ++ AI +G + + +A L KL HF R FVQMCVLSGCD+L ++ ++GPV A V + P R++ I+ + P +++ AEA F+ H+V++P R C H
Sbjct: 133 VKVTSDVVCAVHAALRAASVDFVIAPFEADAQMVYLCKVQKASAIITEDSDILVYSITANVAVPIL-------------LKLDYPSGACKIVSKAI---------------------------------------------------------------------------------------LKAHGATAKSSAF--LKKLVHFLDDSIDSIRMFVQMCVLSGCDFLESLPNIGPVTAQKHVFAFRGAPGHLRMQRILSKLKMDNSTLAIPSDYLDRCRAAEALFYHHYVYNPDSRACEH 331
BLAST of mRNA_P-wetherbeei_contig7866.1.2 vs. uniprot
Match: A0A2D4CBL0_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CBL0_PYTIN) HSP 1 Score: 87.0 bits (214), Expect = 5.510e-15 Identity = 78/305 (25.57%), Postives = 112/305 (36.72%), Query Frame = 3
Query: 6 VRVTRRMAAQVQSALRAEGFETIVAPYEADAQVAYLCKIGLASAIITEDSDILVYLMAAGIAADVTVLYKLDRYGNARAL-RLDCS---KGPTTTLAAAIEACPRSKPAGGGSDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRSRGNSGVRRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGNGKSGRKAAIGLLDKLHHFGGPGGGRRFVQMCVLSGCDYLSNVKSVGPVRAADSVIRYASDPAETRIESIVETWTREGRPAPPGFVESAARAEASFFFHHVFDPRERRCVHFCEP 908
V +T + + V LR +VAP+EADAQ+ ++C+ GLASAI+TEDSD+LVY +AA + D VL+KLD G AL RL KG T +E S ++AA R FVQ+C LSGCD+L ++ ++G V A V + P+ R++ +V G P FV + E FF H +F+ + ++C EP
Sbjct: 135 VSITPEIVSNVMQGLRNANVRFVVAPFEADAQMVWMCREGLASAIVTEDSDVLVYCVAASV--DCPVLFKLDDGGMVHALSRLSLHRKCKGSANTFLKRLEHLTTSD----------------------------------------------------------------------------------------KQAA----------------RMFVQVCALSGCDFLDSLPNMGVVTALKHVFSFRGAPSHVRVQRLVSKLAASGTKIPSDFVSRFQQTECIFFHHIIFNEKTQQCEFLVEP 333
BLAST of mRNA_P-wetherbeei_contig7866.1.2 vs. uniprot
Match: A0A418B9E5_9STRA (XPGI domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418B9E5_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 5.580e-12 Identity = 71/276 (25.72%), Postives = 101/276 (36.59%), Query Frame = 3
Query: 81 PYEADAQVAYLCKIGLASAIITEDSDILVYLMAAGIAADVTVLYKLDRYGNARALRLDCSKGPTTTLAAAIEACPRSKPAGGGSDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRSRGNSGVRRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGNGKSGRKAAIGLLDKLHHF--GGPGGGRRFVQMCVLSGCDYLSNVKSVGPVRAADSVIRYASDPAETRIESIVETWTREGRPA--PPGFVESAARAEASFFFHHVFDPRERRCVH 896
P+EADAQ+ YLCK+ ASAIITEDSDILVY + A +A + L+LD G ++ AI +G + + +A L KL HF R FVQMCVLSGCD+L ++ ++GPV A V + P R++ I+ + P +++ AEA F+ H+V++P R C H
Sbjct: 13 PFEADAQMVYLCKVQKASAIITEDSDILVYSITANVAVPIL-------------LKLDYPSGACKIVSKAI---------------------------------------------------------------------------------------LKAHGATAKSSAF--LKKLVHFLDDSIDSIRMFVQMCVLSGCDFLESLPNIGPVTAQKHVFAFRGAPGHLRMQRILSKLKMDNSTLAIPSDYLDRCRAAEALFYHHYVYNPDSRACEH 186
BLAST of mRNA_P-wetherbeei_contig7866.1.2 vs. uniprot
Match: A0A1Y1ZEP0_9FUNG (Exonuclease 1 (Fragment) n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1ZEP0_9FUNG) HSP 1 Score: 73.9 bits (180), Expect = 4.950e-11 Identity = 45/84 (53.57%), Postives = 56/84 (66.67%), Query Frame = 3
Query: 3 CVRVTRRMAAQVQSALRAEGFETIVAPYEADAQVAYLCKIGLASAIITEDSDILVYLMAAGIAADVTVLYKLDRYGNARALRLD 254
CV +T +MA Q+ ALR E E IVAPYEADAQ+AYL KIG SAIITEDSD+LVY V++KLD GN ++++
Sbjct: 122 CVDITPQMAFQLIKALREENVEFIVAPYEADAQLAYLDKIGRVSAIITEDSDLLVYGCKC-------VIFKLDHQGNGIEVKIE 198
BLAST of mRNA_P-wetherbeei_contig7866.1.2 vs. uniprot
Match: A0A5A8DN36_CAFRO (Exonuclease 1 n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DN36_CAFRO) HSP 1 Score: 75.1 bits (183), Expect = 5.450e-11 Identity = 100/308 (32.47%), Postives = 132/308 (42.86%), Query Frame = 3
Query: 6 VRVTRRMAAQVQSALRAEGFETIVAPYEADAQVAYLCKIGLASAIITEDSDILVYLMAAGIAADVTVLYKLDRYGNARALRLDCSKGPTTTLAAAIEACPRSKPAGGGSDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRSRGNSGVRRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGNGKSGRKAAIGLLDKLHHFGGPGGGRRFVQMCVLSGCDYLSNVKSVGPVRAADSVIRYASDPAETRIESIVETWTREGRPAPPGFVESAARAEASFFFHHVFDPR---ERRCVHFCEPGGNS 920
+ VT V ALRA IVAP+EADAQ+A L G S+I+TEDSD+ V+L A G DV LY++D G + LR+ GP + + ++ + A G XXXXXXXXXXXXXX S R + R K + L KL R+FVQ+CVL+GCDYL++ +G + R A+ + R IV ++G P P G+ AEA F H VFDP RR V C GG++
Sbjct: 135 ISVTFEHTLPVLRALRAMRVPYIVAPFEADAQLAALAAGGHCSSIVTEDSDVAVFLSACGAGCDV--LYRMDDRGVGQLLRV--RPGPLSEWVS-LDGIEVMRAASAGRAAARSASAGPQPXXXXXXXXXXXXXXMGYAPSPGRAPAPSSRAP-----------------------------------KVVTPSTYAFLRKLSALSA----RQFVQLCVLAGCDYLTSPPGLGLRTGVKYLQRTAAADDDARPARIVREMAKDGVPVPDGYRRLFCMAEAGFRRHVVFDPALRAARRLVPVC--GGDA 396
BLAST of mRNA_P-wetherbeei_contig7866.1.2 vs. uniprot
Match: A0A2V0P4S0_9CHLO (Exonuclease 1 n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0P4S0_9CHLO) HSP 1 Score: 75.9 bits (185), Expect = 5.940e-11 Identity = 103/409 (25.18%), Postives = 137/409 (33.50%), Query Frame = 3
Query: 6 VRVTRRMAAQVQSALRAEGFETIVAPYEADAQVAYLCKIGLASAIITEDSDILVYLMAAGIAADVTVLYKLDRYGNARALRLDCSKGPTTTLAAAIEACPRSKPAGGGSDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRSRGNSGVRRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGNGKSGRKAAIGLLDKLHHFGGPGGGRRFVQMCVLSGCDYLSNVKSVGPVRAADSVIRYASDPAETRIESIVETWTREGRPAPPGFVESAARAEASFFFHHVFDPRERRCVHFCE-PGGNSGGXXXXXXXXXXXXXXXXTVIYQEDDDFAEAPDFAALGD----PSLFLGDSIGAEDALRVASGVLDPVTLEPVEVAVIGRAAAAAPGRRQRAQATIGAVATAG 1217
V VT MA QV AL+A G E +VAPYEADAQ+AYL + G A++TEDSD+L Y A V +KLDR G C + LA A P + L H F+QMC+LSGCD+L+ ++ +G +A V +Y +V+ G P PPG+ + RA +F VF P R VH P G G + P GD P FLG ++ E A +A+G LDP+T +P ++ I A P Q A +G AG
Sbjct: 123 VDVTPAMARQVIDALKAAGVEFLVAPYEADAQMAYLARRGSVHAVVTEDSDLLAY-------ACPRVAFKLDRSGA-------CEE----VLAEEFTAVP----------------------------------------------------------------------------------------------GLPLASFTHEM--------FLQMCILSGCDFLAGLQGIGVRKAHGYVRKYKG------FVKLVKVLRFSGVPIPPGYEVAFQRALWAFRHCRVFCPAARTMVHLTPLPAGGIGAAD------------------------VDVPAAVPAGDQERAPLEFLGPALPDEVARGIAAGELDPITHQPFDLQAIY---AGCPNPPQHVAALLGLQEAAG 378 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7866.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7866.1.2 >prot_P-wetherbeei_contig7866.1.2 ID=prot_P-wetherbeei_contig7866.1.2|Name=mRNA_P-wetherbeei_contig7866.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=419bp MAAQVQSALRAEGFETIVAPYEADAQVAYLCKIGLASAIITEDSDILVYLback to top mRNA from alignment at P-wetherbeei_contig7866:538..2852- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7866.1.2 ID=mRNA_P-wetherbeei_contig7866.1.2|Name=mRNA_P-wetherbeei_contig7866.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2315bp|location=Sequence derived from alignment at P-wetherbeei_contig7866:538..2852- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7866:538..2852- >mRNA_P-wetherbeei_contig7866.1.2 ID=mRNA_P-wetherbeei_contig7866.1.2|Name=mRNA_P-wetherbeei_contig7866.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1257bp|location=Sequence derived from alignment at P-wetherbeei_contig7866:538..2852- (Phaeothamnion wetherbeei SAG_119_79)back to top |