mRNA_P-wetherbeei_contig7862.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7862.1.1
Unique NamemRNA_P-wetherbeei_contig7862.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig7862.1.1 vs. uniprot
Match: A0A835YT40_9STRA (Anxa6 protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT40_9STRA)

HSP 1 Score: 174 bits (440), Expect = 2.500e-47
Identity = 87/163 (53.37%), Postives = 123/163 (75.46%), Query Frame = 1
Query:    4 IVMELIKAERSEAPA-DPTLADRQADELHSAGVGRMGTDEATFIQVMTKSSFPQIQAIKAAYEKRHGMSLEKAIRKETSGNFEDALIALTQTPEDYYSARLRKAMEGVGTNEAALSRILGGHDKHEIARIASRYLERYGQTLLEAIKRDTSGNFERACVMWVA 489
            +++ L++A R E  A D  LA  QA++LH+AG GR+GTDE TFI ++T++SF Q+QAIKAAYE+  G SLE AIR E+ G+ E+AL+AL +TP   Y+A L++A  G+GT++AA++R LG +DK ++ARIA  YLE +GQTL+EA+K + SG+F  A V WVA
Sbjct:  512 VIVALLRAVRDEGSAVDSELAANQAEQLHAAGAGRLGTDEETFISILTRASFEQVQAIKAAYERAQGASLESAIRSESRGDAENALLALLRTPHAGYAAALKRAFRGLGTDDAAVARALGSNDKPDVARIADIYLENFGQTLVEALKEELSGSFRLAAVTWVA 674          
BLAST of mRNA_P-wetherbeei_contig7862.1.1 vs. uniprot
Match: D7FJE4_ECTSI (Annexin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJE4_ECTSI)

HSP 1 Score: 165 bits (417), Expect = 2.670e-44
Identity = 79/168 (47.02%), Postives = 123/168 (73.21%), Query Frame = 1
Query:    4 IVMELIKAERSEAPADPTLADRQADELHSAGVG-RMGTDEATFIQVMTKSSFPQIQAIKAAYEKRHGMSLEKAIRKETSGNFEDALIALTQTPEDYYSARLRKAMEGVGTNEAALSRILGGHDKHEIARIASRYLERYGQTLLEAIKRDTSGNFERACVMWVAVEDPL 504
            +V+ LI+ ER E   D  LA +QA ELH+AG+G R+GTD+ TFI+++T++S PQI+ I+  YE+ HGMSLEKAI+KE SG+FE  L+A+ + P  YY+  L+ A +G+ ++++A++R+LGG+DK  + +IA  +L  YG++L+ A+K +TSG F RA + W+   DP+
Sbjct:  512 VVLALIRGERQEDVVDEGLAVQQAQELHAAGIGKRLGTDKKTFIRILTQASRPQIELIRQYYERNHGMSLEKAIKKECSGSFETMLLAMIKDPIAYYALLLKTAFKGISSDKSAIARVLGGNDKPMVEKIAELFLTNYGESLMAALKTETSGKFRRAVLTWLCSSDPV 679          
BLAST of mRNA_P-wetherbeei_contig7862.1.1 vs. uniprot
Match: A0A6H5L407_9PHAE (Annexin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L407_9PHAE)

HSP 1 Score: 163 bits (413), Expect = 1.350e-43
Identity = 78/168 (46.43%), Postives = 122/168 (72.62%), Query Frame = 1
Query:    4 IVMELIKAERSEAPADPTLADRQADELHSAGVG-RMGTDEATFIQVMTKSSFPQIQAIKAAYEKRHGMSLEKAIRKETSGNFEDALIALTQTPEDYYSARLRKAMEGVGTNEAALSRILGGHDKHEIARIASRYLERYGQTLLEAIKRDTSGNFERACVMWVAVEDPL 504
            +V+ LI+ ER E   D  LA +QA ELH+AG+G R+GTD+ TFI+++T++S PQI+ I+  YE+ HGMSLEKAI+KE SG+FE  L+A+ + P  YY+  L+ A +G+ ++++ ++R+LGG+DK  + +IA  +L  YG++L+ A+K +TSG F RA + W+   DP+
Sbjct:  491 VVLALIRGERQEDVVDEGLAVQQAQELHAAGIGKRLGTDKKTFIRILTQASRPQIELIRQYYERNHGMSLEKAIKKECSGSFETMLLAMIKDPIAYYALLLKTAFKGISSDKSTIARVLGGNDKPTVQKIAELFLTNYGESLVAALKTETSGKFRRAVLTWLCSSDPV 658          
BLAST of mRNA_P-wetherbeei_contig7862.1.1 vs. uniprot
Match: A0A836CML3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CML3_9STRA)

HSP 1 Score: 148 bits (373), Expect = 6.010e-39
Identity = 80/158 (50.63%), Postives = 106/158 (67.09%), Query Frame = 1
Query:    1 RIVMELIKAERSE-APADPTLADRQADELHSAGVGRMGTDEATFIQVMTKSSFPQIQAIKAAYEKRHGMSLEKAIRKETSGNFEDALIALTQTPEDYYSARLRKAMEGVGTNEAALSRILGGHDKHEIARIASRYLERYGQTLLEAIKRDTSGNFERA 471
            +I+++L+ A+R E  PAD   A  QA  L  AGVG+ GTDE  F+   T++S  QIQAIKA YEK  G SL  A+ +ETSG+ E  L+AL   P +YY+  L KA +G+GT+EAA+ R+L   DK E+  +A  YLE YG+TL EAIK + SG+FERA
Sbjct:  381 KIIVQLLHAQRDEEGPADVARASAQARALLDAGVGQWGTDEGVFVSTFTRASRAQIQAIKAEYEKLAGHSLRSAVERETSGDVEAVLVALLYEPTEYYARLLHKAFKGMGTDEAAVVRVLTSLDKREMKPVADHYLETYGRTLTEAIKSELSGDFERA 538          
BLAST of mRNA_P-wetherbeei_contig7862.1.1 vs. uniprot
Match: F0YFB9_AURAN (Annexin (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YFB9_AURAN)

HSP 1 Score: 126 bits (317), Expect = 1.350e-32
Identity = 68/156 (43.59%), Postives = 97/156 (62.18%), Query Frame = 1
Query:    4 IVMELIKAERSE-APADPTLADRQADELHSAGVGRMGTDEATFIQVMTKSSFPQIQAIKAAYEKRHGMSLEKAIRKETSGNFEDALIALTQTPEDYYSARLRKAMEGVGTNEAALSRILGGHDKHEIARIASRYLERYGQTLLEAIKRDTSGNFER 468
            + ++L+K ER E   AD   A+  AD+L +AG    GTDE  FI+V+ K+S     A++ AYE +HG SLE  I  E SGN    L AL   P DYY+ RL+ A  G+GT++A + R+LGGHDK ++  IA+ Y  +YG  L + +K + SGN++R
Sbjct:  136 LALQLLKGERDELGEADEAEAEALADKL-AAGAAGWGTDEQAFIEVLAKNSPETNYAVRTAYENKHGKSLESLIESEMSGNLAKCLGALLLPPADYYAKRLKDAFRGLGTSDAVVCRVLGGHDKADVREIAAAYERKYGTPLKDDLKAECSGNYKR 290          
BLAST of mRNA_P-wetherbeei_contig7862.1.1 vs. uniprot
Match: A0A836CCJ5_9STRA (Annexin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCJ5_9STRA)

HSP 1 Score: 130 bits (327), Expect = 5.730e-32
Identity = 79/178 (44.38%), Postives = 110/178 (61.80%), Query Frame = 1
Query:   28 ERSEAPA-DPTLADRQADELHSAGVGRMGTDEATFIQVMTKSSFPQIQ----------------AIKAAYEKRHGMSLEKAIRKETSGNFEDALIALTQTPEDYYSA-RLRKAMEGVGTNEAALSRILGGHDKHEIARIASRYLERYGQTLLEAIKRDT--SGNFERACVMWVAVEDP 501
            ++SE+ A D  LA +QA+ LH AGVGRMGTDE TFI+++ K S  QIQ                AIK AYE+   MSL++AI KETSG+F+ ALIAL       Y+A  LRK+ EGVGT++  + R+LGG DK  +  +   YL+ YG+TL +++ ++T  +G+F  A + W    DP
Sbjct:  155 QKSESTAVDTGLATQQAERLHKAGVGRMGTDEDTFIEILVKQSRAQIQXXXXXXXXXXXXXXXXAIKDAYERNFSMSLKRAIEKETSGDFKTALIALLLPSTAAYTALALRKSFEGVGTDKDRICRVLGGTDKLLMPAVCEAYLDTYGETLQQSLNKETLVTGDFLLAAMAWCQCSDP 332          
BLAST of mRNA_P-wetherbeei_contig7862.1.1 vs. uniprot
Match: A0A2J6L073_LACSA (Annexin n=2 Tax=Lactuca sativa TaxID=4236 RepID=A0A2J6L073_LACSA)

HSP 1 Score: 116 bits (291), Expect = 5.050e-30
Identity = 61/152 (40.13%), Postives = 100/152 (65.79%), Query Frame = 1
Query:   19 IKAERSEAP-ADPTLADRQADELHSAGVGRMGTDEATFIQVMTKSSFPQIQAIKAAYEKRHGMSLEKAIRKETSGNFEDALIALTQTPED---YYSARLRKAMEGVGTNEAALSRILGGHDKHEIARIASRYLERYGQTLLEAIKRDTSGNF 462
            I   RSE P  D T+ ++ A  L +AG  R+GTDE TF  + ++ S P + A+ +AY+   G +L+KAI+ ETSGNFE AL+ + Q+ E+   Y++  LRKAM+G+GT++  L+R++    + ++  I + Y ++YG+TL +A+  +TSGN+
Sbjct:    6 ISMPRSEGPDVDRTVVEQDAKALFNAGEKRLGTDERTFRSIFSERSRPHMDAVSSAYKNMFGNTLKKAIKSETSGNFEYALVTILQSAENPGKYFAKVLRKAMKGLGTDDKTLTRVIVTRTEMDMQYIKAEYYKKYGKTLTDAVHSETSGNY 157          
BLAST of mRNA_P-wetherbeei_contig7862.1.1 vs. uniprot
Match: UPI001B7DD022 (annexin A13-like n=1 Tax=Carcharodon carcharias TaxID=13397 RepID=UPI001B7DD022)

HSP 1 Score: 117 bits (294), Expect = 1.430e-29
Identity = 64/160 (40.00%), Postives = 102/160 (63.75%), Query Frame = 1
Query:    1 RIVMELIKAERSEA-PADPTLADRQADELHSAGVGRMGTDEATFIQVMTKSSFPQIQAIKAAYEKRHGMSLEKAIRKETSGNFEDALIALTQTPED---YYSARLRKAMEGVGTNEAALSRILGGHDKHEIARIASRYLERYGQTLLEAIKRDTSGNFER 468
            ++++ L++A+R E    + +LA+R A ELH AG  R GTDE  F  V+TK +  Q++A   AYE  HG ++E+ I+KETSG+ E A + + Q  +D   Y++  L +AM+G GTNE  L RI+    + ++  I  RY + Y ++L EA+K +TSG+F++
Sbjct:   84 KLLLSLLEADRDEGFEVNESLAERDAKELHEAGENRWGTDELAFNTVLTKRNCMQLRATFKAYEILHGAAIEEVIKKETSGDVEKAYMTIVQCTKDCQAYFAEVLHEAMKGAGTNEDTLIRIVVSRSEVDLPSIKERYQDMYKKSLAEAVKSETSGDFQK 243          
BLAST of mRNA_P-wetherbeei_contig7862.1.1 vs. uniprot
Match: A0A6S7MMN1_LACSI (Annexin n=1 Tax=Lactuca saligna TaxID=75948 RepID=A0A6S7MMN1_LACSI)

HSP 1 Score: 114 bits (285), Expect = 3.330e-29
Identity = 59/148 (39.86%), Postives = 98/148 (66.22%), Query Frame = 1
Query:   31 RSEAP-ADPTLADRQADELHSAGVGRMGTDEATFIQVMTKSSFPQIQAIKAAYEKRHGMSLEKAIRKETSGNFEDALIALTQTPED---YYSARLRKAMEGVGTNEAALSRILGGHDKHEIARIASRYLERYGQTLLEAIKRDTSGNF 462
            RSE P  D T+ ++ A  L +AG  R+GTDE TF  + ++ S P + A+ +AY+   G +L+KAI+ ETSGNFE AL+ + Q+ E+   Y++  LRKAM+G+GT++  L+R++    + ++  I + Y ++YG+TL +A+  +TS N+
Sbjct:    3 RSEGPDVDRTIVEQDAKALFNAGEKRLGTDEQTFRSIFSERSRPHMDAVSSAYKNMFGNTLKKAIKSETSGNFEYALVTILQSAENPGKYFAKVLRKAMKGLGTDDKTLTRVIVTRTEMDMQYIKAEYYKKYGKTLTDAVHSETSSNY 150          
BLAST of mRNA_P-wetherbeei_contig7862.1.1 vs. uniprot
Match: A0A835YQ69_9STRA (Annexin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ69_9STRA)

HSP 1 Score: 121 bits (303), Expect = 9.820e-29
Identity = 68/144 (47.22%), Postives = 92/144 (63.89%), Query Frame = 1
Query:    1 RIVMELIKAERSE-APADPTLADRQADELHSAGVGRMGTDEATFIQVMTKSSFPQIQAIKAAYEKRHGMSLEKAIRKETSGNFEDALIALTQTPEDYYSARLRKAMEGVGT----------------NEAALSRILGGHDKHEI 381
            R+++EL+KAER E A ADP  A +QA  L+SAGVG  GTDE  F+   TKSS  QI+AIK AYE+ +G SL  AI +ETSG+ EDAL+AL   P ++++  L +A +G+GT                +E A+ R+LG HDK E+
Sbjct:  717 RVIVELLKAERDESAQADPARAAQQAQALYSAGVGAWGTDEGVFMNTFTKSSRAQIEAIKDAYERAYGHSLRNAIERETSGDLEDALVALLYAPTEFFARVLNRAFKGLGTGKAVAVMRVPSGRRDTHEVAVVRVLGDHDKCEL 860          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7862.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YT40_9STRA2.500e-4753.37Anxa6 protein n=1 Tax=Tribonema minus TaxID=303371... [more]
D7FJE4_ECTSI2.670e-4447.02Annexin n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5L407_9PHAE1.350e-4346.43Annexin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
A0A836CML3_9STRA6.010e-3950.63Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
F0YFB9_AURAN1.350e-3243.59Annexin (Fragment) n=1 Tax=Aureococcus anophageffe... [more]
A0A836CCJ5_9STRA5.730e-3244.38Annexin n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
A0A2J6L073_LACSA5.050e-3040.13Annexin n=2 Tax=Lactuca sativa TaxID=4236 RepID=A0... [more]
UPI001B7DD0221.430e-2940.00annexin A13-like n=1 Tax=Carcharodon carcharias Ta... [more]
A0A6S7MMN1_LACSI3.330e-2939.86Annexin n=1 Tax=Lactuca saligna TaxID=75948 RepID=... [more]
A0A835YQ69_9STRA9.820e-2947.22Annexin n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7862contigP-wetherbeei_contig7862:3..1146 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FJE4
PFAMsAnnexin,Gelsolin
Model size504
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons3
Evalue2.65e-44
EggNOG OGsKOG0819@1|root,KOG0819@2759|Eukaryota
Descriptioncalcium-dependent phospholipid binding
Cds size495
COG categoryS
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187005.3563201-UTR-P-wetherbeei_contig7862:2..111683187005.3563201-UTR-P-wetherbeei_contig7862:2..11Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig7862 3..11 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187005.3724418-CDS-P-wetherbeei_contig7862:11..1371683187005.3724418-CDS-P-wetherbeei_contig7862:11..137Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7862 12..137 +
1683187005.3815284-CDS-P-wetherbeei_contig7862:537..6841683187005.3815284-CDS-P-wetherbeei_contig7862:537..684Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7862 538..684 +
1683187005.3909912-CDS-P-wetherbeei_contig7862:924..11461683187005.3909912-CDS-P-wetherbeei_contig7862:924..1146Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7862 925..1146 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7862.1.1prot_P-wetherbeei_contig7862.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7862 12..1146 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7862.1.1

>prot_P-wetherbeei_contig7862.1.1 ID=prot_P-wetherbeei_contig7862.1.1|Name=mRNA_P-wetherbeei_contig7862.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=165bp
MELIKAERSEAPADPTLADRQADELHSAGVGRMGTDEATFIQVMTKSSFP
QIQAIKAAYEKRHGMSLEKAIRKETSGNFEDALIALTQTPEDYYSARLRK
AMEGVGTNEAALSRILGGHDKHEIARIASRYLERYGQTLLEAIKRDTSGN
FERACVMWVAVEDPL
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mRNA from alignment at P-wetherbeei_contig7862:3..1146+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7862.1.1 ID=mRNA_P-wetherbeei_contig7862.1.1|Name=mRNA_P-wetherbeei_contig7862.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1144bp|location=Sequence derived from alignment at P-wetherbeei_contig7862:3..1146+ (Phaeothamnion wetherbeei SAG_119_79)
CGCATCGTGATGGAGCTGATTAAGGCGGAGCGCAGCGAGGCGCCGGCCGA CCCCACGCTCGCCGACCGCCAGGCGGATGAGCTGCACTCCGCCGGTGTCG GCCGCATGGGCACCGACGAGGCCACCTTTATCCAGGTTTGTGTTGGTTTG TCCATCTGAGCCTCTTTTCTCTGTCCCCGACGACTCTTCTCACCAATAAA GGAGGCTCTGTTTTTCCGTCTTCGAGTTTCCGGTGGGCGTTTCTCCCCAA TGAAGGCAGCTTTGGTAGTTGGCCGCCGCGTCGACGGCGGCAGCGGCTCT TCGCAGTCTTTTCGACAGAGTGCGTCCCGACTGGTCATGTGCGATTTGAG GGAGGGAGCGGGAAAGATGCACTTGCAGAGCGGCAGAATCAAAATGGTTC ACGCGGCGCGAGGCTAAATTGCTTCGTGTGCCTCCCTTCGTTCTTCTTTT TTCTTCTTTCTTCTTATTTCTTCGCCCCATGCCCCCGCAATCCCGGTTAT TCCGTCTTCCTTCCACTCTCCTTCTCTGCGTGCAGGTCATGACCAAGTCG TCGTTCCCGCAGATCCAGGCCATCAAGGCGGCATACGAGAAGCGCCACGG CATGTCGCTCGAGAAGGCCATCCGCAAGGAGACAAGTGGCAACTTTGAGG ACGCCCTCATCGCCCTCACCCAGACCCCTGAGGTCAGCTTTTGCCTTCTT TGGGCGATTAGGTGGTAAACCATTCGTTCGCTCCTTGACCAATGAATTTT CTGCTTGCTTTTCTTGGGGCATTTTTTTGTTTGCGGGTCGATGTGTATTC CTCATTCAGTATTGGGACTGTTGCACCTTGTCTCTGATTCCACTTTCCTC TGCTCAGTCAGTCTCCTTGTTCTTCCTCCGCCAAACTGAAACTGGAAACT GCGCAACCGGAAACGCGAACAGGACTACTACTCGGCGCGGCTTCGCAAGG CGATGGAGGGCGTGGGCACCAACGAGGCGGCCCTCTCGCGCATCCTCGGC GGCCATGACAAGCACGAGATCGCGCGCATTGCAAGCCGCTACCTCGAGCG CTATGGCCAGACGCTCCTCGAGGCTATCAAGCGCGACACGTCGGGCAACT TTGAGCGCGCATGCGTTATGTGGGTGGCCGTCGAGGATCCGCTG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig7862:3..1146+

>mRNA_P-wetherbeei_contig7862.1.1 ID=mRNA_P-wetherbeei_contig7862.1.1|Name=mRNA_P-wetherbeei_contig7862.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=495bp|location=Sequence derived from alignment at P-wetherbeei_contig7862:3..1146+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGAGCTGATTAAGGCGGAGCGCAGCGAGGCGCCGGCCGACCCCACGCT
CGCCGACCGCCAGGCGGATGAGCTGCACTCCGCCGGTGTCGGCCGCATGG
GCACCGACGAGGCCACCTTTATCCAGGTCATGACCAAGTCGTCGTTCCCG
CAGATCCAGGCCATCAAGGCGGCATACGAGAAGCGCCACGGCATGTCGCT
CGAGAAGGCCATCCGCAAGGAGACAAGTGGCAACTTTGAGGACGCCCTCA
TCGCCCTCACCCAGACCCCTGAGGACTACTACTCGGCGCGGCTTCGCAAG
GCGATGGAGGGCGTGGGCACCAACGAGGCGGCCCTCTCGCGCATCCTCGG
CGGCCATGACAAGCACGAGATCGCGCGCATTGCAAGCCGCTACCTCGAGC
GCTATGGCCAGACGCTCCTCGAGGCTATCAAGCGCGACACGTCGGGCAAC
TTTGAGCGCGCATGCGTTATGTGGGTGGCCGTCGAGGATCCGCTG
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