mRNA_P-wetherbeei_contig7858.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7858.2.1
Unique NamemRNA_P-wetherbeei_contig7858.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig7858.2.1 vs. uniprot
Match: A0A835Z3L7_9STRA (Choline-phosphate cytidylyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3L7_9STRA)

HSP 1 Score: 426 bits (1096), Expect = 9.740e-145
Identity = 210/275 (76.36%), Postives = 230/275 (83.64%), Query Frame = 2
Query:  140 PVETLCKYMPGSFRPDLKRLVEGEPGTLTGRPLRLYADGIFDLFHYGHAKALEQAKRSFPNTTLLVGCCSDALTHRLKGRTVMKDTERYESLRHCKWVDEVIEEAPWVVTDEFLAKHQIDFVCHDALPYTDASGQSSSGDVYAHLKRNGRFVETQRTDGISTSDIITSIIQDYDMFVRRNLERGYSGKDMNVGFLKERLIKFDMAKDRLASNIGKLIKDRQLVTDLGDRTRGTITDVERAFVQVFDRDSAFRTRLRQRRKEIRQRISRLAQQSFC 964
            PVETLC Y+PG F PDL +L EGEPGTLTGRP+RLYADGIFDLFHYGHAKALEQAKR+FPN  LLVGCCSDALTHRLKGRTV+KDTERYESLRHCKWVDEV+E+APWVVTDEFL  H IDFVCHDALPY DASG S  GDVYAHLKR GRFVET+RT+GISTSDIITSIIQDYD FVRRNL RGYS KDMNV FLKE+ IKF M K+R+A NIGKLIK+      L +       D+++AFV VF+RDSAFRTR R +RKEIR RI  LA+ S C
Sbjct:  110 PVETLCSYLPGGFFPDLSKLKEGEPGTLTGRPMRLYADGIFDLFHYGHAKALEQAKRAFPNVYLLVGCCSDALTHRLKGRTVLKDTERYESLRHCKWVDEVVEDAPWVVTDEFLCAHSIDFVCHDALPYGDASGVSDDGDVYAHLKRAGRFVETRRTEGISTSDIITSIIQDYDEFVRRNLRRGYSAKDMNVSFLKEQAIKFGMVKERVAENIGKLIKENSQAQALAE-------DLQKAFVSVFNRDSAFRTRWRNQRKEIRNRIGVLAKNSLC 377          
BLAST of mRNA_P-wetherbeei_contig7858.2.1 vs. uniprot
Match: D8LPY9_ECTSI (Choline-phosphate cytidylyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPY9_ECTSI)

HSP 1 Score: 410 bits (1054), Expect = 1.490e-138
Identity = 202/312 (64.74%), Postives = 238/312 (76.28%), Query Frame = 2
Query:  140 PVETLCKYMPGSFRPDLKRLVEGEPGTLTGRPLRLYADGIFDLFHYGHAKALEQAKRSFPNTTLLVGCCSDALTHRLKGRTVMKDTERYESLRHCKWVDEVIEEAPWVVTDEFLAKHQIDFVCHDALPYTDASGQSSSGDVYAHLKRNGRFVETQRTDGISTSDIITSIIQDYDMFVRRNLERGYSGKDMNVGFLKERLIKFDMAKDRLASNIGKLIKDRQ-------------------------------------LVTDLGDRTRGTITDVERAFVQVFDRDSAFRTRLRQRRKEIRQRISRLAQQSFC 964
            P      ++P  FRPDL +LV G PGT TGRPLRLYADGIFDLFHYGHAKALEQAKRSFPN+ LLVGCC+D LTH LKGRTV+KDTERYESL+HCKWVDEV+E+APWVV ++F+A HQIDFVCHDALPY DASGQSSSGDVYAHLKR GRFVETQRT+GISTSDIITSIIQDYD+FVRRN+ERGY+ +DMNV FLKE+ IKFD+ KD++   +GK+IKDRQ                                     LV DLG+  + TITD++R FVQ+FDRD A RT  R++R++IR+R++ LA+ SFC
Sbjct:   54 PARVDMAFLPNGFRPDLTKLVAGAPGTSTGRPLRLYADGIFDLFHYGHAKALEQAKRSFPNSYLLVGCCNDKLTHELKGRTVLKDTERYESLKHCKWVDEVVEDAPWVVDEDFIAVHQIDFVCHDALPYGDASGQSSSGDVYAHLKRQGRFVETQRTEGISTSDIITSIIQDYDVFVRRNMERGYNARDMNVPFLKEQAIKFDIVKDKVTRRVGKVIKDRQKKKTKQQAGGALITKGVKGRGXXXXGVDPNGNKERHNLVLDLGNHAQETITDMQRNFVQIFDRDGAIRTSFREQRRQIRERVNVLARTSFC 365          
BLAST of mRNA_P-wetherbeei_contig7858.2.1 vs. uniprot
Match: A0A8K1FT60_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FT60_PYTOL)

HSP 1 Score: 343 bits (881), Expect = 4.360e-112
Identity = 162/269 (60.22%), Postives = 209/269 (77.70%), Query Frame = 2
Query:  170 GSFRPDLKRLVEGEPGTLTGRPLRLYADGIFDLFHYGHAKALEQAKRSFPNTTLLVGCCSDALTHRLKGRTVMKDTERYESLRHCKWVDEVIEEAPWVVTDEFLAKHQIDFVCHDALPYTDASGQSSSGDVYAHLKRNGRFVETQRTDGISTSDIITSIIQDYDMFVRRNLERGYSGKDMNVGFLKERLIKFDMAKDRLASNIGKLIKDRQLVTDLGDRTRGTITDVERAFVQVFDRDSAFRTRLRQRRKEIRQRISR----LAQQSFC 964
            G ++P  K L +GEPGTLTGRPLRLYADGIFDLFH+GHAKAL+Q K ++PN  LLVGCCSD LTH+LKGRTVM D ERYESLRHCKWVDEV+E+APWV+TDEF+ KHQID+VCHDALPY+D+SG+SS GDVYA +K  G+F+ET+RTDGISTSD+I  II +YD F+RRNL+RGY+GKDMNV F+KE+ IKFDMA D++  ++  L+           +  G   D++ +F+ +F ++   RT  R+RRK I++R+S     +A++  C
Sbjct:  128 GEYQPFRKELKDGEPGTLTGRPLRLYADGIFDLFHFGHAKALQQCKEAYPNVYLLVGCCSDELTHKLKGRTVMTDKERYESLRHCKWVDEVVEDAPWVLTDEFIEKHQIDYVCHDALPYSDSSGESSDGDVYARIKMMGKFLETKRTDGISTSDLIIRIIAEYDTFIRRNLQRGYTGKDMNVPFMKEQSIKFDMAVDKVKHDVDSLVH----------KVLGKAEDMQHSFLDLFSKEGRLRTSFRKRRKIIKERLSERLSDMAREGLC 386          
BLAST of mRNA_P-wetherbeei_contig7858.2.1 vs. uniprot
Match: K3WSJ0_GLOUD (Choline-phosphate cytidylyltransferase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSJ0_GLOUD)

HSP 1 Score: 338 bits (867), Expect = 9.800e-111
Identity = 163/288 (56.60%), Postives = 209/288 (72.57%), Query Frame = 2
Query:  113 GGFCLNDGAPVETLCKYMPGSFRPDLKRLVEGEPGTLTGRPLRLYADGIFDLFHYGHAKALEQAKRSFPNTTLLVGCCSDALTHRLKGRTVMKDTERYESLRHCKWVDEVIEEAPWVVTDEFLAKHQIDFVCHDALPYTDASGQSSSGDVYAHLKRNGRFVETQRTDGISTSDIITSIIQDYDMFVRRNLERGYSGKDMNVGFLKERLIKFDMAKDRLASNIGKLIKDRQLVTDLGDRTRGTITDVERAFVQVFDRDSAFRTRLRQRRKEIRQRISR----LAQQSFC 964
            GG        VE   +     + P  K LVEGEPGTLTGRPLRLYADGIFDLFH+GHAKAL+Q K ++PNT LLVGCC D +TH+LKGRTVM D ERYESLRHCKWVDEV+E+APWV+TDEF+ KH ID+VCHDALPY+DASG++S GDVYA +K  G+F+ET+RTDGISTSD+I  I+ +YD F+RRNL RGY+GK+MNV F+KE+ IKFDMA D++  ++   +           +  G   D++  F+ +F +D   RT  R+RRK I++R+S     +A++  C
Sbjct:   56 GGSSAEGDNDVEEKARKAYDEYEPYRKTLVEGEPGTLTGRPLRLYADGIFDLFHFGHAKALQQCKEAYPNTYLLVGCCGDEITHKLKGRTVMTDKERYESLRHCKWVDEVVEDAPWVITDEFIEKHNIDYVCHDALPYSDASGEASEGDVYARIKAMGKFLETKRTDGISTSDLIIRIVAEYDTFIRRNLARGYTGKEMNVPFMKEQSIKFDMAVDKVKHDVDGFVH----------KWVGKAEDMQHGFLDLFSKDGRLRTSFRKRRKIIKERLSERLSDMAREGLC 333          
BLAST of mRNA_P-wetherbeei_contig7858.2.1 vs. uniprot
Match: H3GGV7_PHYRM (Choline-phosphate cytidylyltransferase n=20 Tax=Peronosporaceae TaxID=4777 RepID=H3GGV7_PHYRM)

HSP 1 Score: 335 bits (859), Expect = 6.600e-110
Identity = 159/265 (60.00%), Postives = 207/265 (78.11%), Query Frame = 2
Query:  182 PDLKRLVEGEPGTLTGRPLRLYADGIFDLFHYGHAKALEQAKRSFPNTTLLVGCCSDALTHRLKGRTVMKDTERYESLRHCKWVDEVIEEAPWVVTDEFLAKHQIDFVCHDALPYTDASGQSSSGDVYAHLKRNGRFVETQRTDGISTSDIITSIIQDYDMFVRRNLERGYSGKDMNVGFLKERLIKFDMAKDRLASNIGKLIKDRQLVTDLGDRTRGTITDVERAFVQVFDRDSAFRTRLRQRRKEIRQRISR----LAQQSFC 964
            P  K L EGEPGTLTGRPLRLYADGIFDLFH+GHAKAL+Q K ++PNT L+VGCCSD +TH+LKGRTVM D ERYESLRHC+WVDEV+E+APWV++DEFL +HQID+VCHDALPY+DASG++S GDVYA +K  G+F+ET+RTDGISTSD+I  II +YD F+RRNL+RGYSGKDMNV F+KE+ IKFDMA D++ +++   +       D          D++ +F+++F ++   RT  R+RRK I++R+S     +A++  C
Sbjct:   53 PYRKTLKEGEPGTLTGRPLRLYADGIFDLFHFGHAKALQQCKEAYPNTFLIVGCCSDEITHKLKGRTVMTDKERYESLRHCRWVDEVVEDAPWVLSDEFLEEHQIDYVCHDALPYSDASGEASEGDVYARIKAMGKFLETRRTDGISTSDLIIRIIAEYDTFIRRNLQRGYSGKDMNVPFIKEKSIKFDMAVDKVRNDVDGFVHKWISKAD----------DMQHSFLELFSKEGRLRTSFRKRRKIIKERLSERMSEMAREGLC 307          
BLAST of mRNA_P-wetherbeei_contig7858.2.1 vs. uniprot
Match: A0A8J5MIM5_9STRA (CTP_transf_like domain-containing protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5MIM5_9STRA)

HSP 1 Score: 335 bits (858), Expect = 1.030e-109
Identity = 160/265 (60.38%), Postives = 206/265 (77.74%), Query Frame = 2
Query:  182 PDLKRLVEGEPGTLTGRPLRLYADGIFDLFHYGHAKALEQAKRSFPNTTLLVGCCSDALTHRLKGRTVMKDTERYESLRHCKWVDEVIEEAPWVVTDEFLAKHQIDFVCHDALPYTDASGQSSSGDVYAHLKRNGRFVETQRTDGISTSDIITSIIQDYDMFVRRNLERGYSGKDMNVGFLKERLIKFDMAKDRLASNIGKLIKDRQLVTDLGDRTRGTITDVERAFVQVFDRDSAFRTRLRQRRKEIRQRISR----LAQQSFC 964
            P  K+L EGEPGT TGRPLRLYADGIFDLFH+GHAKAL+Q K ++PNT LLVGCCSD +TH+LKGRTVM D ERYESLRHCKWVDEV+E+APWV++DEFL KHQID+VCHDALPY+DASG++S GDVYA +K  G+F+ET+RTDGISTSD+I  II +YD F+RRNL+RGYSGKDMNV F+KE+ IKFDMA D++ +++   +       D          +++  F+++F ++   RT  R+RRK I++R+S     +A++  C
Sbjct:   56 PYRKKLKEGEPGTPTGRPLRLYADGIFDLFHFGHAKALQQCKEAYPNTYLLVGCCSDDITHKLKGRTVMTDQERYESLRHCKWVDEVVEDAPWVLSDEFLEKHQIDYVCHDALPYSDASGEASEGDVYARIKAMGKFLETRRTDGISTSDLIIRIIAEYDTFIRRNLQRGYSGKDMNVPFIKEKSIKFDMAVDKVRNDVDGFVHKWMNKAD----------EMQHNFLELFSKEGRLRTSFRKRRKIIKERLSERMSEMAREGLC 310          
BLAST of mRNA_P-wetherbeei_contig7858.2.1 vs. uniprot
Match: A0A067CQ07_SAPPC (Choline-phosphate cytidylyltransferase n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CQ07_SAPPC)

HSP 1 Score: 333 bits (855), Expect = 2.090e-109
Identity = 159/259 (61.39%), Postives = 203/259 (78.38%), Query Frame = 2
Query:  191 KRLVEGEPGTLTGRPLRLYADGIFDLFHYGHAKALEQAKRSFPNTTLLVGCCSDALTHRLKGRTVMKDTERYESLRHCKWVDEVIEEAPWVVTDEFLAKHQIDFVCHDALPYTDASGQSSSG-DVYAHLKRNGRFVETQRTDGISTSDIITSIIQDYDMFVRRNLERGYSGKDMNVGFLKERLIKFDMAKDRLASNIGKLIKDRQLVTDLGDRTRGTITDVERAFVQVFDRDSAFRTRLRQRRKEIRQRISRLAQQSFC 964
            + L EGEPG+LTGRPLRL+ADGIFDLFH+GHA+AL+Q K+++PN  LLVGCC+D +THRLKGRTVM + ERYESLRHCKWVDEVIE +PWV+TDEFL KHQID+VCHDA+PYTD+SGQS  G DVYAH+K  G+F ETQRTDGISTSD+I  II +YD F+RRNL+RGYSGK+MNV F+KE+ IK DMA D++  +I           D   +  G   DV+ +F+ +F ++ A RT LR+RRK +R+ ++ +A++  C
Sbjct:   52 RELKEGEPGSLTGRPLRLFADGIFDLFHFGHARALQQCKQAYPNVYLLVGCCNDEMTHRLKGRTVMSEEERYESLRHCKWVDEVIEGSPWVLTDEFLDKHQIDYVCHDAIPYTDSSGQSGDGGDVYAHIKAIGKFHETQRTDGISTSDLIIRIISEYDTFIRRNLQRGYSGKEMNVPFMKEKAIKLDMAMDKVKHDI----------EDYFHKVFGKADDVQHSFLNLFSKEGALRTSLRKRRKILRESLADMAREGLC 300          
BLAST of mRNA_P-wetherbeei_contig7858.2.1 vs. uniprot
Match: V9ETF1_PHYPR (Choline-phosphate cytidylyltransferase n=6 Tax=Peronosporaceae TaxID=4777 RepID=V9ETF1_PHYPR)

HSP 1 Score: 333 bits (854), Expect = 4.300e-109
Identity = 159/265 (60.00%), Postives = 205/265 (77.36%), Query Frame = 2
Query:  182 PDLKRLVEGEPGTLTGRPLRLYADGIFDLFHYGHAKALEQAKRSFPNTTLLVGCCSDALTHRLKGRTVMKDTERYESLRHCKWVDEVIEEAPWVVTDEFLAKHQIDFVCHDALPYTDASGQSSSGDVYAHLKRNGRFVETQRTDGISTSDIITSIIQDYDMFVRRNLERGYSGKDMNVGFLKERLIKFDMAKDRLASNIGKLIKDRQLVTDLGDRTRGTITDVERAFVQVFDRDSAFRTRLRQRRKEIRQRISR----LAQQSFC 964
            P  K+L EGEPGTLTGRPLRLYADGIFDLFH+GHAKAL+Q K ++PNT LLVGCCSD +TH+LKG TVM D ERYESLRHCKWVDEV+E+APWV++DEFL KH+ID+VCHDALPY+DASG++S GDVYA +K  G+F+ET+RTDGISTSD+I  II +YD F+RRNL RGYSGKDMNV F+KE+ IKFDMA D++ +++   +       D          +++  F+++F ++   RT  R+RRK I++R+S     +A++  C
Sbjct:   57 PYRKKLKEGEPGTLTGRPLRLYADGIFDLFHFGHAKALQQCKEAYPNTYLLVGCCSDEITHKLKGHTVMTDKERYESLRHCKWVDEVVEDAPWVLSDEFLEKHKIDYVCHDALPYSDASGEASEGDVYARIKAMGKFLETRRTDGISTSDLIIRIIAEYDTFIRRNLARGYSGKDMNVPFIKEKSIKFDMAVDKVRNDVDGFVHKWMNKAD----------EMQHNFLELFSKEGRLRTSFRKRRKIIKERLSERMSEMAREGLC 311          
BLAST of mRNA_P-wetherbeei_contig7858.2.1 vs. uniprot
Match: A0A1W0A2K4_9STRA (Choline-phosphate cytidylyltransferase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A2K4_9STRA)

HSP 1 Score: 330 bits (846), Expect = 3.910e-108
Identity = 157/262 (59.92%), Postives = 205/262 (78.24%), Query Frame = 2
Query:  182 PDLKRLVEGEPGTLTGRPLRLYADGIFDLFHYGHAKALEQAKRSFPNTTLLVGCCSDALTHRLKGRTVMKDTERYESLRHCKWVDEVIEEAPWVVTDEFLAKHQIDFVCHDALPYTDASGQSSSGD-VYAHLKRNGRFVETQRTDGISTSDIITSIIQDYDMFVRRNLERGYSGKDMNVGFLKERLIKFDMAKDRLASNIGKLIKDRQLVTDLGDRTRGTITDVERAFVQVFDRDSAFRTRLRQRRKEIRQRISRLAQQSFC 964
            P  + + EGEPG+LTGRPLRL+ADGIFD+FH+GHA+AL+Q K+++PN  LLVGCC+D +THRLKGRTVM + ERYESLRHCKWVDEVIE +PWV+TDEFL +H+IDFVCHDA+PYTDASGQS  GD VYAH+K  G+F ETQRT+GISTSD+I  II +YD F+RRNL+RGYSGK+MNV F+KE++IK DMA D++  +I           D   +  G   DV+ +F+ +F ++ A RT LR+RRK +R+ ++ +A++  C
Sbjct:   43 PVRREIEEGEPGSLTGRPLRLFADGIFDMFHFGHARALQQCKQAYPNVYLLVGCCNDEMTHRLKGRTVMTEEERYESLRHCKWVDEVIEGSPWVLTDEFLDEHRIDFVCHDAIPYTDASGQSGDGDDVYAHIKAIGKFHETQRTEGISTSDLIIRIISEYDTFIRRNLKRGYSGKEMNVPFMKEKVIKLDMAMDKVKHDI----------EDYFHKVFGKAEDVQHSFLNLFSKEGALRTSLRKRRKILRESLADMAREGLC 294          
BLAST of mRNA_P-wetherbeei_contig7858.2.1 vs. uniprot
Match: M4B8N2_HYAAE (Choline-phosphate cytidylyltransferase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B8N2_HYAAE)

HSP 1 Score: 330 bits (846), Expect = 2.020e-107
Identity = 156/265 (58.87%), Postives = 205/265 (77.36%), Query Frame = 2
Query:  182 PDLKRLVEGEPGTLTGRPLRLYADGIFDLFHYGHAKALEQAKRSFPNTTLLVGCCSDALTHRLKGRTVMKDTERYESLRHCKWVDEVIEEAPWVVTDEFLAKHQIDFVCHDALPYTDASGQSSSGDVYAHLKRNGRFVETQRTDGISTSDIITSIIQDYDMFVRRNLERGYSGKDMNVGFLKERLIKFDMAKDRLASNIGKLIKDRQLVTDLGDRTRGTITDVERAFVQVFDRDSAFRTRLRQRRKEIRQRISR----LAQQSFC 964
            P  K+L EGE GTLTGRPLRLYADGIFDLFH+GHAKAL+Q K ++PNT L+VGCCSD +TH+LKGRTVM D ERYESLRHC+WVDEV+E+APWV++DEF+ KHQID+VCHDALPY+D SG++S GDVYA +K  G+F+ET+RT+GISTSD+I  II +YD F+RRNL+RGYSGKDMNV F+KE+ IKFDMA D++ +++   +       D          D++  F+++F ++   RT  R+RRK I++R+S     +A++  C
Sbjct:   89 PYRKKLEEGEAGTLTGRPLRLYADGIFDLFHFGHAKALQQCKEAYPNTYLIVGCCSDEITHKLKGRTVMTDKERYESLRHCRWVDEVVEDAPWVLSDEFIEKHQIDYVCHDALPYSDTSGEASEGDVYARIKAMGKFLETRRTNGISTSDLIIRIIAEYDTFIRRNLQRGYSGKDMNVPFIKEKSIKFDMAVDKVRNDVDGFVHKWISKAD----------DMQHGFLELFSKEGRLRTSFRKRRKIIKERLSERMSEMAREGLC 343          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7858.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z3L7_9STRA9.740e-14576.36Choline-phosphate cytidylyltransferase n=1 Tax=Tri... [more]
D8LPY9_ECTSI1.490e-13864.74Choline-phosphate cytidylyltransferase n=2 Tax=Ect... [more]
A0A8K1FT60_PYTOL4.360e-11260.22Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3WSJ0_GLOUD9.800e-11156.60Choline-phosphate cytidylyltransferase n=1 Tax=Glo... [more]
H3GGV7_PHYRM6.600e-11060.00Choline-phosphate cytidylyltransferase n=20 Tax=Pe... [more]
A0A8J5MIM5_9STRA1.030e-10960.38CTP_transf_like domain-containing protein n=1 Tax=... [more]
A0A067CQ07_SAPPC2.090e-10961.39Choline-phosphate cytidylyltransferase n=3 Tax=Sap... [more]
V9ETF1_PHYPR4.300e-10960.00Choline-phosphate cytidylyltransferase n=6 Tax=Per... [more]
A0A1W0A2K4_9STRA3.910e-10859.92Choline-phosphate cytidylyltransferase n=1 Tax=Thr... [more]
M4B8N2_HYAAE2.020e-10758.87Choline-phosphate cytidylyltransferase n=1 Tax=Hya... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7858contigP-wetherbeei_contig7858:1617..2935 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LPY9
Preferred namePCYT1A
PFAMsCTP_transf_like
Model size1319
Max annot lvl2759|Eukaryota
KEGG rclassRC00002
KEGG koko:K00968
KEGG ReactionR01890,R02590
KEGG Pathwayko00440,ko00564,ko01100,ko05231,map00440,map00564,map01100,map05231
KEGG ModuleM00090
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0001541,GO:0001654,GO:0001736,GO:0001738,GO:0001745,GO:0002009,GO:0002165,GO:0003006,GO:0003674,GO:0003824,GO:0004105,GO:0005488,GO:0005515,GO:0005516,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005737,GO:0005783,GO:0005789,GO:0005886,GO:0006629,GO:0006644,GO:0006650,GO:0006656,GO:0006657,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006897,GO:0007163,GO:0007164,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007292,GO:0007423,GO:0007444,GO:0007472,GO:0007476,GO:0007548,GO:0007552,GO:0007560,GO:0007568,GO:0008150,GO:0008152,GO:0008289,GO:0008340,GO:0008406,GO:0008585,GO:0008610,GO:0008654,GO:0009058,GO:0009653,GO:0009719,GO:0009725,GO:0009791,GO:0009886,GO:0009887,GO:0009888,GO:0009987,GO:0010033,GO:0010243,GO:0010259,GO:0012505,GO:0016020,GO:0016192,GO:0016740,GO:0016772,GO:0016779,GO:0019637,GO:0019898,GO:0019953,GO:0022412,GO:0022414,GO:0030154,GO:0031210,GO:0031967,GO:0031975,GO:0031984,GO:0032501,GO:0032502,GO:0032504,GO:0035107,GO:0035114,GO:0035120,GO:0035220,GO:0035239,GO:0035295,GO:0042067,GO:0042175,GO:0042221,GO:0042587,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043434,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045017,GO:0045137,GO:0046470,GO:0046474,GO:0046486,GO:0046545,GO:0046660,GO:0046983,GO:0048232,GO:0048468,GO:0048477,GO:0048513,GO:0048563,GO:0048569,GO:0048592,GO:0048608,GO:0048609,GO:0048707,GO:0048729,GO:0048731,GO:0048736,GO:0048737,GO:0048749,GO:0048856,GO:0048869,GO:0050896,GO:0050997,GO:0051179,GO:0051234,GO:0051704,GO:0060429,GO:0060562,GO:0061458,GO:0070405,GO:0070567,GO:0071704,GO:0071944,GO:0090407,GO:0090596,GO:0097164,GO:0098657,GO:0098827,GO:1901564,GO:1901566,GO:1901576,GO:1901652,GO:1901698,GO:1901700,GO:1904116
Exons1
Evalue2.31e-141
EggNOG OGsCOG0615@1|root,KOG2804@2759|Eukaryota
Ec32 ortholog descriptionCTP:phosphorylcholine cytidylyltransferase
Ec32 orthologEc-15_001610.1
EC2.7.7.15
Descriptioncholine-phosphate cytidylyltransferase activity
Cds size804
COG categoryIM
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187005.1024184-UTR-P-wetherbeei_contig7858:1616..17791683187005.1024184-UTR-P-wetherbeei_contig7858:1616..1779Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig7858 1617..1779 +
1683187005.1271198-UTR-P-wetherbeei_contig7858:2583..29351683187005.1271198-UTR-P-wetherbeei_contig7858:2583..2935Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig7858 2584..2935 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187005.1152205-CDS-P-wetherbeei_contig7858:1779..25831683187005.1152205-CDS-P-wetherbeei_contig7858:1779..2583Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7858 1780..2583 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7858.2.1prot_P-wetherbeei_contig7858.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7858 1780..2583 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7858.2.1

>prot_P-wetherbeei_contig7858.2.1 ID=prot_P-wetherbeei_contig7858.2.1|Name=mRNA_P-wetherbeei_contig7858.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=268bp
MPGSFRPDLKRLVEGEPGTLTGRPLRLYADGIFDLFHYGHAKALEQAKRS
FPNTTLLVGCCSDALTHRLKGRTVMKDTERYESLRHCKWVDEVIEEAPWV
VTDEFLAKHQIDFVCHDALPYTDASGQSSSGDVYAHLKRNGRFVETQRTD
GISTSDIITSIIQDYDMFVRRNLERGYSGKDMNVGFLKERLIKFDMAKDR
LASNIGKLIKDRQLVTDLGDRTRGTITDVERAFVQVFDRDSAFRTRLRQR
RKEIRQRISRLAQQSFC*
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mRNA from alignment at P-wetherbeei_contig7858:1617..2935+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7858.2.1 ID=mRNA_P-wetherbeei_contig7858.2.1|Name=mRNA_P-wetherbeei_contig7858.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1319bp|location=Sequence derived from alignment at P-wetherbeei_contig7858:1617..2935+ (Phaeothamnion wetherbeei SAG_119_79)
ACGAGCAGGGGAAAGCGCCCGCATCGAGTCTCCAGGTGAGGCGAGTAGCG GCGGCGATGATGCAAAGTCAACAGGGAGCAGCGATGCGAGCAGCGATGCG GACAGCGATGCGGGCGGCTTCTGCCTCAACGACGGCGCGCCGGTGGAGAC GCTCTGCAAGTACATGCCGGGCTCGTTCCGGCCGGACCTCAAGCGCCTCG TCGAGGGAGAGCCCGGCACGCTGACGGGTCGGCCTCTGCGGCTTTACGCC GACGGAATCTTCGACCTGTTCCACTACGGCCACGCCAAGGCGCTTGAGCA GGCGAAGCGAAGCTTCCCCAACACGACGCTCCTCGTGGGCTGCTGCTCAG ATGCACTTACCCACCGCCTCAAGGGGCGCACCGTGATGAAGGACACGGAG CGCTACGAATCGCTGCGTCACTGCAAATGGGTCGACGAGGTCATCGAGGA AGCGCCGTGGGTCGTCACCGACGAATTCCTCGCCAAGCACCAAATCGACT TTGTCTGCCACGACGCGCTCCCGTACACGGACGCCTCGGGCCAGAGCTCC AGCGGCGATGTATACGCGCACCTGAAGCGCAACGGCCGCTTCGTGGAGAC GCAGCGCACCGACGGCATATCGACGAGCGACATCATCACAAGCATCATTC AGGACTACGACATGTTCGTCCGCCGCAACCTCGAGCGCGGCTACTCCGGC AAGGACATGAACGTTGGCTTCCTGAAGGAGCGGCTCATCAAGTTCGACAT GGCGAAGGACAGACTCGCCAGCAACATCGGCAAGCTCATCAAGGACCGCC AGCTCGTGACGGACCTCGGCGACCGGACGCGCGGGACCATCACGGACGTC GAGCGGGCGTTCGTGCAGGTCTTTGACCGCGACTCGGCGTTCCGGACGCG CCTGCGGCAGCGCCGGAAGGAGATCCGCCAGCGCATCTCCCGTCTCGCGC AACAAAGCTTTTGCTAGCGACGGGCGATGGCGACGCCGTTCCCGGTGCCT GTTTCGGCCGCCGCGGCGGCCGACTCAGCAGCGGATGGCTTCTAGCGGCG GCGGGTAGCGGGCGGCGGGCAGAGCTGGGGAGTGGCGAAAGGTATCAGCG GTAGGGTGGACAGGAAGAGCAAGCCGGCTAGGGCGGCGCAGCAGGGTGTT TGGGCCTGGTGCGGCGCGGGCCAGCCCATTCCAGCGCCGCAGCTGGCCGG CTCTCCTGCCGCTCGGCTCGCATTAGGGCTGGCCGAGCGTGTATGGGGCG CATCTTCAGCCGGAAAAAGGATGGGTTAGGGGGATGCGTTTTTGGCAGGT TAGGCCGGGGGGGGGGGGG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig7858:1617..2935+

>mRNA_P-wetherbeei_contig7858.2.1 ID=mRNA_P-wetherbeei_contig7858.2.1|Name=mRNA_P-wetherbeei_contig7858.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=804bp|location=Sequence derived from alignment at P-wetherbeei_contig7858:1617..2935+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCCGGGCTCGTTCCGGCCGGACCTCAAGCGCCTCGTCGAGGGAGAGCC
CGGCACGCTGACGGGTCGGCCTCTGCGGCTTTACGCCGACGGAATCTTCG
ACCTGTTCCACTACGGCCACGCCAAGGCGCTTGAGCAGGCGAAGCGAAGC
TTCCCCAACACGACGCTCCTCGTGGGCTGCTGCTCAGATGCACTTACCCA
CCGCCTCAAGGGGCGCACCGTGATGAAGGACACGGAGCGCTACGAATCGC
TGCGTCACTGCAAATGGGTCGACGAGGTCATCGAGGAAGCGCCGTGGGTC
GTCACCGACGAATTCCTCGCCAAGCACCAAATCGACTTTGTCTGCCACGA
CGCGCTCCCGTACACGGACGCCTCGGGCCAGAGCTCCAGCGGCGATGTAT
ACGCGCACCTGAAGCGCAACGGCCGCTTCGTGGAGACGCAGCGCACCGAC
GGCATATCGACGAGCGACATCATCACAAGCATCATTCAGGACTACGACAT
GTTCGTCCGCCGCAACCTCGAGCGCGGCTACTCCGGCAAGGACATGAACG
TTGGCTTCCTGAAGGAGCGGCTCATCAAGTTCGACATGGCGAAGGACAGA
CTCGCCAGCAACATCGGCAAGCTCATCAAGGACCGCCAGCTCGTGACGGA
CCTCGGCGACCGGACGCGCGGGACCATCACGGACGTCGAGCGGGCGTTCG
TGCAGGTCTTTGACCGCGACTCGGCGTTCCGGACGCGCCTGCGGCAGCGC
CGGAAGGAGATCCGCCAGCGCATCTCCCGTCTCGCGCAACAAAGCTTTTG
CTAG
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