mRNA_P-wetherbeei_contig7797.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7797.1.1 vs. uniprot
Match: A0A6A7M1E0_9PROT (Superoxide dismutase n=1 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A6A7M1E0_9PROT) HSP 1 Score: 253 bits (645), Expect = 1.080e-83 Identity = 127/162 (78.40%), Postives = 139/162 (85.80%), Query Frame = 1
Query: 49 GCLASLQAQAQTAPATARAALKDASGKDVGRVDLVQIPTGVLLKMSLKGFPAGDRAFHIHAVGKCEPPFASAGPHFNPGNKKHGIAAADGAHAGDMPNLHIPASGELVVEIANPMISLVKGQANSVFDADGSAIVIHAAADDYKSDPAGNAGDRIACGVIVE 534
GCL SL A AQTA +AALKDA GK+VG+V L+Q P GVLLKM+LKG P G+RAFHIHAVGKCEPPF SAGPHFNP N KHG+ A +GAHAGDMPNLHIPA+GELV+EIANPMISL KGQ NS+FDADGSAIVIHA ADDYKSDPAGNAGDRI CGV+ E
Sbjct: 3 GCLMSLPAHAQTA----KAALKDARGKEVGQVQLIQTPHGVLLKMALKGAPPGERAFHIHAVGKCEPPFTSAGPHFNPANHKHGMEAKEGAHAGDMPNLHIPANGELVIEIANPMISLAKGQPNSLFDADGSAIVIHAGADDYKSDPAGNAGDRIICGVVSE 160
BLAST of mRNA_P-wetherbeei_contig7797.1.1 vs. uniprot
Match: A0A512NSI0_9HYPH (Superoxide dismutase [Cu-Zn] n=1 Tax=Reyranella soli TaxID=1230389 RepID=A0A512NSI0_9HYPH) HSP 1 Score: 249 bits (635), Expect = 5.220e-82 Identity = 123/161 (76.40%), Postives = 138/161 (85.71%), Query Frame = 1
Query: 52 CLASLQAQAQTAPATARAALKDASGKDVGRVDLVQIPTGVLLKMSLKGFPAGDRAFHIHAVGKCEPPFASAGPHFNPGNKKHGIAAADGAHAGDMPNLHIPASGELVVEIANPMISLVKGQANSVFDADGSAIVIHAAADDYKSDPAGNAGDRIACGVIVE 534
CL SL A AQTA +A+LKDA GKDVG+V L Q P GVLLKMSLKG P G+RAFHIHAVGKCEPPF SAGPHFNP + KHG+ A +G+HAGDMPNLHIPASGELV+EIANPMISLVKGQ NS+FDADGSAI+IHA +DDYK+DP GNAGDR+ACGV+ E
Sbjct: 15 CLLSLPAYAQTA----KASLKDAQGKDVGQVQLTQTPHGVLLKMSLKGAPPGERAFHIHAVGKCEPPFTSAGPHFNPASHKHGLEAKEGSHAGDMPNLHIPASGELVIEIANPMISLVKGQPNSLFDADGSAIIIHAGSDDYKTDPTGNAGDRVACGVVTE 171
BLAST of mRNA_P-wetherbeei_contig7797.1.1 vs. uniprot
Match: A0A1H8WTK9_9PROT (Superoxide dismutase [Cu-Zn] n=1 Tax=Rhodospirillales bacterium URHD0017 TaxID=1380357 RepID=A0A1H8WTK9_9PROT) HSP 1 Score: 241 bits (616), Expect = 4.080e-79 Identity = 119/160 (74.38%), Postives = 137/160 (85.62%), Query Frame = 1
Query: 55 LASLQAQAQTAPATARAALKDASGKDVGRVDLVQIPTGVLLKMSLKGFPAGDRAFHIHAVGKCEPPFASAGPHFNPGNKKHGIAAADGAHAGDMPNLHIPASGELVVEIANPMISLVKGQANSVFDADGSAIVIHAAADDYKSDPAGNAGDRIACGVIVE 534
L +L A AQTA +A+LKDA GKDVG+V L Q P GVLLKM+LKG PAG+RAFHIH+VGKCEPPF SAGPHFNP + KHG+ A +G+HAGDMPNLHIP +G+LV+EIANPMISLVKGQ NS+FDADGSAI+IHA ADDYK+DP GNAGDRIACGV+ E
Sbjct: 16 LMALPAHAQTA----KASLKDAQGKDVGQVQLTQTPHGVLLKMTLKGAPAGERAFHIHSVGKCEPPFTSAGPHFNPASHKHGMEAKEGSHAGDMPNLHIPMNGDLVIEIANPMISLVKGQPNSLFDADGSAIIIHAGADDYKTDPTGNAGDRIACGVVTE 171
BLAST of mRNA_P-wetherbeei_contig7797.1.1 vs. uniprot
Match: A0A521RMF5_9HYPH (Superoxide dismutase [Cu-Zn] n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521RMF5_9HYPH) HSP 1 Score: 238 bits (607), Expect = 7.810e-78 Identity = 119/158 (75.32%), Postives = 136/158 (86.08%), Query Frame = 1
Query: 61 SLQAQAQTAPATARAALKDASGKDVGRVDLVQIPTGVLLKMSLKGFPAGDRAFHIHAVGKCEPPFASAGPHFNPGNKKHGIAAADGAHAGDMPNLHIPASGELVVEIANPMISLVKGQANSVFDADGSAIVIHAAADDYKSDPAGNAGDRIACGVIVE 534
SL A+AQ+ TA+A+LKDA+GKDVG V LVQ P GVLLKM+LKG G+ AFHIHAVGKCE PF SAG HFNP +KKHG+ AA+G+HAGDMPNLHIPA+GEL +EIANPM+SLVKGQANSVFDADGSAI+IHA DDY++DP GNAGDRIACGVI E
Sbjct: 10 SLSARAQSP--TAKASLKDAAGKDVGSVQLVQTPHGVLLKMALKGAVPGEHAFHIHAVGKCEAPFTSAGGHFNPASKKHGMEAAEGSHAGDMPNLHIPANGELTIEIANPMVSLVKGQANSVFDADGSAIIIHAGVDDYRTDPTGNAGDRIACGVITE 165
BLAST of mRNA_P-wetherbeei_contig7797.1.1 vs. uniprot
Match: A0A1D2TKQ3_9BURK (Superoxide dismutase [Cu-Zn] n=3 Tax=Proteobacteria TaxID=1224 RepID=A0A1D2TKQ3_9BURK) HSP 1 Score: 233 bits (595), Expect = 7.080e-76 Identity = 120/176 (68.18%), Postives = 138/176 (78.41%), Query Frame = 1
Query: 7 ISRLMTCSLVALVAGCLASLQAQAQTAPATARAALKDASGKDVGRVDLVQIPTGVLLKMSLKGFPAGDRAFHIHAVGKCEPPFASAGPHFNPGNKKHGIAAADGAHAGDMPNLHIPASGELVVEIANPMISLVKGQANSVFDADGSAIVIHAAADDYKSDPAGNAGDRIACGVIVE 534
I R + V G ASL A AQTA +AALKDA GK+VG V L+Q P GVLLKM+LKG G+ AFHIHAVGKCEPPF SAG HFNP +KKHG+ A +GAHAGDMPNL++PA+GEL V++AN M++L KGQ NSVFDADGSAI+IHA ADDYK+DP GNAGDRIACGVIVE
Sbjct: 3 IGRFVAALSVVCTLGVAASLPAHAQTA----KAALKDAGGKEVGTVQLIQTPHGVLLKMALKGVAPGEHAFHIHAVGKCEPPFTSAGGHFNPASKKHGMEAKEGAHAGDMPNLYVPANGELTVDVANHMVTLAKGQPNSVFDADGSAIIIHAGADDYKTDPTGNAGDRIACGVIVE 174
BLAST of mRNA_P-wetherbeei_contig7797.1.1 vs. uniprot
Match: A0A521L3S3_9HYPH (Superoxide dismutase [Cu-Zn] n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521L3S3_9HYPH) HSP 1 Score: 232 bits (592), Expect = 1.890e-75 Identity = 112/147 (76.19%), Postives = 125/147 (85.03%), Query Frame = 1
Query: 94 TARAALKDASGKDVGRVDLVQIPTGVLLKMSLKGFPAGDRAFHIHAVGKCEPPFASAGPHFNPGNKKHGIAAADGAHAGDMPNLHIPASGELVVEIANPMISLVKGQANSVFDADGSAIVIHAAADDYKSDPAGNAGDRIACGVIVE 534
TA+AALKDA+GKDVG V L+Q P GVLL+MSLKG PAG+RAFHIHAVGKCEPPF SAG HFNP KKHG+ A +G+HAGDMPNL +PA+GEL V++ N MI+L KGQ NSVFDADGSAIVIHA DDYKSDP GNAGDRI CGVI E
Sbjct: 26 TAKAALKDATGKDVGTVQLIQTPHGVLLRMSLKGVPAGERAFHIHAVGKCEPPFTSAGGHFNPAGKKHGVEAKEGSHAGDMPNLFVPANGELTVDVVNHMITLAKGQPNSVFDADGSAIVIHAGPDDYKSDPTGNAGDRIVCGVITE 172
BLAST of mRNA_P-wetherbeei_contig7797.1.1 vs. uniprot
Match: UPI001E4EA49C (superoxide dismutase family protein n=2 Tax=Reyranella TaxID=445219 RepID=UPI001E4EA49C) HSP 1 Score: 231 bits (589), Expect = 5.790e-75 Identity = 121/172 (70.35%), Postives = 137/172 (79.65%), Query Frame = 1
Query: 19 MTCSLVALVAGCLASLQAQAQTAPATARAALKDASGKDVGRVDLVQIPTGVLLKMSLKGFPAGDRAFHIHAVGKCEPPFASAGPHFNPGNKKHGIAAADGAHAGDMPNLHIPASGELVVEIANPMISLVKGQANSVFDADGSAIVIHAAADDYKSDPAGNAGDRIACGVIVE 534
M C+L+A AG S AQAQ+ TA+AALKDASGKDVG V LVQ P GVLL+MSLKG G+ AFHIHAVGKCE PF SAG HFNP +KKHG+ A +GAHAGDMPNL IPA+GEL +++AN MI+L KGQ NSVFDADGSAI+IHA DDYK+DP GNAGDRI CGVI E
Sbjct: 6 MMCTLIA-AAGVAVSFSAQAQSP--TAKAALKDASGKDVGTVQLVQTPHGVLLRMSLKGVAPGEHAFHIHAVGKCEAPFTSAGGHFNPASKKHGMEATEGAHAGDMPNLFIPANGELRIDVANHMITLAKGQPNSVFDADGSAIIIHAGPDDYKTDPTGNAGDRIVCGVITE 174
BLAST of mRNA_P-wetherbeei_contig7797.1.1 vs. uniprot
Match: A0A259MSA2_9PROT (Superoxide dismutase [Cu-Zn] n=2 Tax=Rhodospirillales TaxID=204441 RepID=A0A259MSA2_9PROT) HSP 1 Score: 231 bits (588), Expect = 7.950e-75 Identity = 118/170 (69.41%), Postives = 137/170 (80.59%), Query Frame = 1
Query: 25 CSLVALVAGCLASLQAQAQTAPATARAALKDASGKDVGRVDLVQIPTGVLLKMSLKGFPAGDRAFHIHAVGKCEPPFASAGPHFNPGNKKHGIAAADGAHAGDMPNLHIPASGELVVEIANPMISLVKGQANSVFDADGSAIVIHAAADDYKSDPAGNAGDRIACGVIVE 534
CSL+A S AQAQTA +A+LKDA+GKDVG V L+Q P GVLLKMSLKG G+ AFHIHAVGKCE PF SAG HFNP ++KHG+ AA+G+HAGDMPNL+IPA+GEL +++AN M+SL KGQ NSVFDADGSAI+IHA ADDYK+DP GNAGDRIACGVI E
Sbjct: 8 CSLLAATGVAAFSFSAQAQTA----KASLKDATGKDVGTVQLLQTPHGVLLKMSLKGVAPGEHAFHIHAVGKCEAPFTSAGGHFNPASRKHGMEAAEGSHAGDMPNLYIPANGELRIDVANHMVSLAKGQPNSVFDADGSAIIIHAGADDYKTDPTGNAGDRIACGVITE 173
BLAST of mRNA_P-wetherbeei_contig7797.1.1 vs. uniprot
Match: A0A1Q3L243_9PROT (Superoxide dismutase [Cu-Zn] n=1 Tax=Alphaproteobacteria bacterium 65-37 TaxID=1895711 RepID=A0A1Q3L243_9PROT) HSP 1 Score: 229 bits (584), Expect = 3.690e-74 Identity = 116/166 (69.88%), Postives = 136/166 (81.93%), Query Frame = 1
Query: 37 ALVAGCLASLQAQAQTAPATARAALKDASGKDVGRVDLVQIPTGVLLKMSLKGFPAGDRAFHIHAVGKCEPPFASAGPHFNPGNKKHGIAAADGAHAGDMPNLHIPASGELVVEIANPMISLVKGQANSVFDADGSAIVIHAAADDYKSDPAGNAGDRIACGVIVE 534
AL G AS A+AQTA +A+LKDA+GKDVG V LVQ+P GVLLK++LKG G+ AFHIHAVGKCEPPF SAG HFNP +KKHG+ +A+G+HAGDMPNL++PA+GEL +IAN M++L KGQ NSVFDADGSAIVIHA DDYK+DP GNAGDRIACGVI E
Sbjct: 16 ALSLGIAASSVAEAQTA----KASLKDATGKDVGTVQLVQMPQGVLLKLALKGVAPGEHAFHIHAVGKCEPPFTSAGGHFNPASKKHGMGSAEGSHAGDMPNLYVPANGELTADIANNMVTLAKGQPNSVFDADGSAIVIHAGVDDYKTDPTGNAGDRIACGVITE 177
BLAST of mRNA_P-wetherbeei_contig7797.1.1 vs. uniprot
Match: A0A363TSL6_9BRAD (Superoxide dismutase [Cu-Zn] n=1 Tax=Bradyrhizobiaceae bacterium TaxID=2072420 RepID=A0A363TSL6_9BRAD) HSP 1 Score: 222 bits (565), Expect = 2.430e-71 Identity = 112/165 (67.88%), Postives = 128/165 (77.58%), Query Frame = 1
Query: 40 LVAGCLASLQA--QAQTAPATARAALKDASGKDVGRVDLVQIPTGVLLKMSLKGFPAGDRAFHIHAVGKCEPPFASAGPHFNPGNKKHGIAAADGAHAGDMPNLHIPASGELVVEIANPMISLVKGQANSVFDADGSAIVIHAAADDYKSDPAGNAGDRIACGVI 528
L AGCLA+ A A A TA+AA+KDA GKDVG +L Q P GVL+K+SLKG P G+ AFH+HAVGKCEPPF SAG HFNPG KKHG+ A+G HAGDMPNLHIPA G L ++ N MI+L KG+ NSVF ADG+A+VIHA DDYKSDPAGNAG RIACGVI
Sbjct: 7 LAAGCLAAAVALGPATAAAQTAKAAIKDAQGKDVGSAELTQTPAGVLVKVSLKGLPPGEHAFHVHAVGKCEPPFTSAGGHFNPGGKKHGLHVAEGPHAGDMPNLHIPAGGALEAQVLNTMITLEKGKPNSVFHADGTALVIHAGVDDYKSDPAGNAGGRIACGVI 171 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7797.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7797.1.1 >prot_P-wetherbeei_contig7797.1.1 ID=prot_P-wetherbeei_contig7797.1.1|Name=mRNA_P-wetherbeei_contig7797.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=179bp MCISRLMTCSLVALVAGCLASLQAQAQTAPATARAALKDASGKDVGRVDLback to top mRNA from alignment at P-wetherbeei_contig7797:1135..1671- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7797.1.1 ID=mRNA_P-wetherbeei_contig7797.1.1|Name=mRNA_P-wetherbeei_contig7797.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=537bp|location=Sequence derived from alignment at P-wetherbeei_contig7797:1135..1671- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7797:1135..1671- >mRNA_P-wetherbeei_contig7797.1.1 ID=mRNA_P-wetherbeei_contig7797.1.1|Name=mRNA_P-wetherbeei_contig7797.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=537bp|location=Sequence derived from alignment at P-wetherbeei_contig7797:1135..1671- (Phaeothamnion wetherbeei SAG_119_79)back to top |