mRNA_P-wetherbeei_contig7667.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7667.2.1
Unique NamemRNA_P-wetherbeei_contig7667.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig7667.2.1 vs. uniprot
Match: A0A1F4ETE5_9PROT (HemY_N domain-containing protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_68_20 TaxID=1797505 RepID=A0A1F4ETE5_9PROT)

HSP 1 Score: 129 bits (325), Expect = 8.550e-34
Identity = 64/115 (55.65%), Postives = 81/115 (70.43%), Query Frame = 1
Query:    1 REIVERAVAEEWNPALVDLYGHAGAE--------DVRARIERAEGWLPGHPGDARLLLALGRLCVRGELWGKAQNYLEASLSFEPGREKHLALAHLFDKLGKGAEANRHFRMAAE 321
            RE++E+A+A EW+P LV LYG   A         +VRARIERAE WL  HP D +LL +LG+LC + ELWGKA++ LEASL+FE  R  HL LA L ++LG+G EA RH+R AAE
Sbjct:  281 REVIEQALAAEWSPQLVSLYGELPARLDPAERAGEVRARIERAERWLAAHPDDPQLLASLGKLCAQAELWGKARSSLEASLTFEESRAAHLELARLAERLGQGEEAQRHYRRAAE 395          
BLAST of mRNA_P-wetherbeei_contig7667.2.1 vs. uniprot
Match: A0A537BHX6_9PROT (Heme biosynthesis protein HemY (Fragment) n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537BHX6_9PROT)

HSP 1 Score: 126 bits (316), Expect = 1.480e-33
Identity = 65/115 (56.52%), Postives = 78/115 (67.83%), Query Frame = 1
Query:    1 REIVERAVAEEWNPALVDLYGHAG--------AEDVRARIERAEGWLPGHPGDARLLLALGRLCVRGELWGKAQNYLEASLSFEPGREKHLALAHLFDKLGKGAEANRHFRMAAE 321
            R+I+E+A+A EW P LV LYG           A +  ARIER E WLP H  DA+LL  LGRLC   ELWGKA+++LEASLSFE GR  HL LA L ++LG+ AEA RH+R AAE
Sbjct:  154 RDILEKALAAEWTPQLVALYGDLPPHLEPAERAAEAGARIERGERWLPEHERDAQLLAVLGRLCAHAELWGKARSFLEASLSFEEGRGAHLDLARLAERLGQAAEAERHYRRAAE 268          
BLAST of mRNA_P-wetherbeei_contig7667.2.1 vs. uniprot
Match: A0A536SFX5_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536SFX5_9PROT)

HSP 1 Score: 125 bits (313), Expect = 2.350e-33
Identity = 60/104 (57.69%), Postives = 75/104 (72.12%), Query Frame = 1
Query:    7 IVERAVAEEWNPALVDLYGHAGAEDVRARIERAEGWLPGHPGDARLLLALGRLCVRGELWGKAQNYLEASLSFEPGREKHLALAHLFDKLGKGAEANRHFRMAA 318
            I+E A+   W+  L  LYG    ED   R+ERAE WL G PG+A LLL LGRLCV+ ELWGKAQ+YLEASL+ +P +  HLALA LF++LG+  EA+RHFR +A
Sbjct:  133 IIEEALERNWDGPLALLYGECTDEDALERLERAEKWLSGRPGEAELLLTLGRLCVQRELWGKAQSYLEASLATQPSQAAHLALAGLFERLGRTDEASRHFRSSA 236          
BLAST of mRNA_P-wetherbeei_contig7667.2.1 vs. uniprot
Match: A0A1K1MY79_9PROT (HemY protein n=1 Tax=Nitrosovibrio sp. Nv17 TaxID=1855339 RepID=A0A1K1MY79_9PROT)

HSP 1 Score: 125 bits (313), Expect = 3.980e-33
Identity = 62/109 (56.88%), Postives = 73/109 (66.97%), Query Frame = 1
Query:    1 REIVERAVAEEWNPALVDLYGHAGAEDVRARIERAEGWLPGHPGDARLLLALGRLCVRGELWGKAQNYLEASLSFEPGREKHLALAHLFDKLGKGAEANRHFRMAAESA 327
            R I+E+++ + WN  L  LYG     DV  +IERAE WLP HPGDA LLLALGRLC   ELWGKA++YLEASLS EPG   HLALA L ++ G    A  H+R A E A
Sbjct:  138 RRIIEQSLDKNWNSELAGLYGTCPDTDVLGQIERAEAWLPSHPGDAGLLLALGRLCTHCELWGKARSYLEASLSVEPGHSAHLALASLDERSGHPELAQHHYRQALEWA 246          
BLAST of mRNA_P-wetherbeei_contig7667.2.1 vs. uniprot
Match: A0A521XH87_9PROT (Heme biosynthesis protein HemY (Fragment) n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521XH87_9PROT)

HSP 1 Score: 122 bits (306), Expect = 1.730e-32
Identity = 60/107 (56.07%), Postives = 76/107 (71.03%), Query Frame = 1
Query:    4 EIVERAVAEEWNPALVDLYGHAGAEDVRARIERAEGWLPGHPGDARLLLALGRLCVRGELWGKAQNYLEASLSFEPGREKHLALAHLFDKLGKGAEANRHFRMAAES 324
            EIV  A+  EW+  L+ LYG     DV A+IERAE WL   P +  LLL LGRLC+  ELWGKA++YLEASLS EP R  H+ALA LFD++GK  +ANRH+R +A++
Sbjct:  119 EIVAAALETEWSGELILLYGECLGADVLAQIERAEKWLKSRPRERALLLTLGRLCLAQELWGKARSYLEASLSEEPSRGAHVALAQLFDRIGKPEDANRHYRASADA 225          
BLAST of mRNA_P-wetherbeei_contig7667.2.1 vs. uniprot
Match: A0A2W4K2D9_9PROT (Heme biosynthesis protein HemY n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4K2D9_9PROT)

HSP 1 Score: 126 bits (317), Expect = 2.380e-32
Identity = 60/108 (55.56%), Postives = 74/108 (68.52%), Query Frame = 1
Query:    7 IVERAVAEEWNPALVDLYGHAGAEDVRARIERAEGWLPGHPGDARLLLALGRLCVRGELWGKAQNYLEASLSFEPGREKHLALAHLFDKLGKGAEANRHFRMAAESAT 330
            ++  A+A  W P LV LYG    ED   RI+R E WL  HP DA LLL LGRLC+  ELWGKAQ+YLEASLS +P R  H  LA L++K+G+  EA RH+R+AA+ AT
Sbjct:  332 LIAEALARNWTPDLVQLYGECDGEDALERIQRCEEWLHDHPHDAVLLLTLGRLCMYRELWGKAQSYLEASLSQQPSRAAHRELARLYEKIGRETEAERHYRIAADVAT 439          
BLAST of mRNA_P-wetherbeei_contig7667.2.1 vs. uniprot
Match: A0A1F3YU06_9PROT (HemY_N domain-containing protein n=3 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F3YU06_9PROT)

HSP 1 Score: 125 bits (314), Expect = 3.000e-32
Identity = 59/107 (55.14%), Postives = 77/107 (71.96%), Query Frame = 1
Query:    1 REIVERAVAEEWNPALVDLYGHAGAEDVRARIERAEGWLPGHPGDARLLLALGRLCVRGELWGKAQNYLEASLSFEPGREKHLALAHLFDKLGKGAEANRHFRMAAE 321
            R ++E A+A EW+P LV LYG    ++   RIERAE WL   P DA LLLALGRLC + ELWGKA++YLEASL+    R+ H+ALA L D++G+  EA+RH+R AA+
Sbjct:  281 RLVIENALAAEWDPVLVRLYGECPDDEAIPRIERAEAWLKEQPQDAELLLALGRLCAQRELWGKARSYLEASLALHAIRDSHIALARLCDRIGRAEEADRHYRAAAQ 387          
BLAST of mRNA_P-wetherbeei_contig7667.2.1 vs. uniprot
Match: A0A6S6XVN0_9PROT (Uncharacterized protein n=1 Tax=Denitratisoma oestradiolicum TaxID=311182 RepID=A0A6S6XVN0_9PROT)

HSP 1 Score: 125 bits (313), Expect = 4.340e-32
Identity = 61/105 (58.10%), Postives = 72/105 (68.57%), Query Frame = 1
Query:    7 IVERAVAEEWNPALVDLYGHAGAEDVRARIERAEGWLPGHPGDARLLLALGRLCVRGELWGKAQNYLEASLSFEPGREKHLALAHLFDKLGKGAEANRHFRMAAE 321
            ++E A+ E+W+ ALV  YG     DV  RI  AE WLP HP D RLLL LGRLC R +LWGKAQ+YLEASLS +P RE H+ LA L   L +  EANRH+R AAE
Sbjct:  284 LIEDALEEQWDSALVSAYGECEGGDVLRRISHAEKWLPAHPRDERLLLTLGRLCRRQQLWGKAQSYLEASLSVQPMRETHVELARLLGYLERSEEANRHYRAAAE 388          
BLAST of mRNA_P-wetherbeei_contig7667.2.1 vs. uniprot
Match: A0A5C9BF75_9RHOO (HemY protein n=3 Tax=Rhodocyclales TaxID=206389 RepID=A0A5C9BF75_9RHOO)

HSP 1 Score: 125 bits (313), Expect = 4.620e-32
Identity = 58/97 (59.79%), Postives = 71/97 (73.20%), Query Frame = 1
Query:   28 EEWNPALVDLYGHAGAEDVRARIERAEGWLPGHPGDARLLLALGRLCVRGELWGKAQNYLEASLSFEPGREKHLALAHLFDKLGKGAEANRHFRMAA 318
            EEW P LV +YG     +  ARI +AEGWL  HP DARLL ALGR+C+R  LWGKAQ+YLEASLS EP ++ HL LA LFD+L +  EAN+H+R +A
Sbjct:  293 EEWQPELVAIYGRLTHSEQTARIAKAEGWLRQHPDDARLLKALGRMCIRQRLWGKAQSYLEASLSVEPSQQGHLELARLFDQLDRAEEANKHYRASA 389          
BLAST of mRNA_P-wetherbeei_contig7667.2.1 vs. uniprot
Match: A0A536STA7_9PROT (Heme biosynthesis protein HemY n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536STA7_9PROT)

HSP 1 Score: 125 bits (313), Expect = 4.760e-32
Identity = 60/104 (57.69%), Postives = 75/104 (72.12%), Query Frame = 1
Query:    7 IVERAVAEEWNPALVDLYGHAGAEDVRARIERAEGWLPGHPGDARLLLALGRLCVRGELWGKAQNYLEASLSFEPGREKHLALAHLFDKLGKGAEANRHFRMAA 318
            I+E A+   W+  L  LYG    ED   R+ERAE WL G PG+A LLL LGRLCV+ ELWGKAQ+YLEASL+ +P +  HLALA LF++LG+  EA+RHFR +A
Sbjct:  283 IIEEALERNWDGPLALLYGECTDEDALERLERAEKWLSGRPGEAELLLTLGRLCVQRELWGKAQSYLEASLATQPSQAAHLALAGLFERLGRTDEASRHFRSSA 386          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7667.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1F4ETE5_9PROT8.550e-3455.65HemY_N domain-containing protein n=1 Tax=Betaprote... [more]
A0A537BHX6_9PROT1.480e-3356.52Heme biosynthesis protein HemY (Fragment) n=1 Tax=... [more]
A0A536SFX5_9PROT2.350e-3357.69Uncharacterized protein n=1 Tax=Betaproteobacteria... [more]
A0A1K1MY79_9PROT3.980e-3356.88HemY protein n=1 Tax=Nitrosovibrio sp. Nv17 TaxID=... [more]
A0A521XH87_9PROT1.730e-3256.07Heme biosynthesis protein HemY (Fragment) n=1 Tax=... [more]
A0A2W4K2D9_9PROT2.380e-3255.56Heme biosynthesis protein HemY n=1 Tax=Proteobacte... [more]
A0A1F3YU06_9PROT3.000e-3255.14HemY_N domain-containing protein n=3 Tax=unclassif... [more]
A0A6S6XVN0_9PROT4.340e-3258.10Uncharacterized protein n=1 Tax=Denitratisoma oest... [more]
A0A5C9BF75_9RHOO4.620e-3259.79HemY protein n=3 Tax=Rhodocyclales TaxID=206389 Re... [more]
A0A536STA7_9PROT4.760e-3257.69Heme biosynthesis protein HemY n=1 Tax=Betaproteob... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7667contigP-wetherbeei_contig7667:2682..3014 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog305700.B447_21282
Preferred namehemY
PFAMsHemY_N
Model size333
Max annot lvl206389|Rhodocyclales
KEGG koko:K02498
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.53e-32
EggNOG OGsCOG3071@1|root,COG3071@2|Bacteria,1MU7A@1224|Proteobacteria,2VK6P@28216|Betaproteobacteria,2KVAI@206389|Rhodocyclales
Descriptionenzyme of heme biosynthesis
Cds size333
COG categoryH
BRITEko00000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186993.9528983-CDS-P-wetherbeei_contig7667:2681..30141683186993.9528983-CDS-P-wetherbeei_contig7667:2681..3014Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7667 2682..3014 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7667.2.1prot_P-wetherbeei_contig7667.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7667 2682..3014 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7667.2.1

>prot_P-wetherbeei_contig7667.2.1 ID=prot_P-wetherbeei_contig7667.2.1|Name=mRNA_P-wetherbeei_contig7667.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=111bp
REIVERAVAEEWNPALVDLYGHAGAEDVRARIERAEGWLPGHPGDARLLL
ALGRLCVRGELWGKAQNYLEASLSFEPGREKHLALAHLFDKLGKGAEANR
HFRMAAESAT*
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mRNA from alignment at P-wetherbeei_contig7667:2682..3014-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7667.2.1 ID=mRNA_P-wetherbeei_contig7667.2.1|Name=mRNA_P-wetherbeei_contig7667.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=333bp|location=Sequence derived from alignment at P-wetherbeei_contig7667:2682..3014- (Phaeothamnion wetherbeei SAG_119_79)
CGGGAGATCGTGGAAAGGGCGGTGGCGGAGGAGTGGAACCCGGCGCTCGT GGACCTGTACGGGCACGCGGGTGCGGAGGACGTGCGCGCGAGGATCGAGA GGGCCGAGGGCTGGCTCCCCGGGCACCCGGGCGACGCCCGGCTGTTGCTG GCGCTCGGGCGCCTGTGCGTGCGCGGCGAACTCTGGGGCAAGGCGCAGAA CTACCTCGAGGCGAGCCTGTCCTTCGAGCCGGGACGCGAGAAGCACCTGG CCCTCGCGCACCTCTTCGACAAGCTCGGCAAGGGCGCCGAGGCGAACCGG CATTTCAGGATGGCGGCCGAATCCGCGACATAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig7667:2682..3014-

>mRNA_P-wetherbeei_contig7667.2.1 ID=mRNA_P-wetherbeei_contig7667.2.1|Name=mRNA_P-wetherbeei_contig7667.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=333bp|location=Sequence derived from alignment at P-wetherbeei_contig7667:2682..3014- (Phaeothamnion wetherbeei SAG_119_79)
CGGGAGATCGTGGAAAGGGCGGTGGCGGAGGAGTGGAACCCGGCGCTCGT
GGACCTGTACGGGCACGCGGGTGCGGAGGACGTGCGCGCGAGGATCGAGA
GGGCCGAGGGCTGGCTCCCCGGGCACCCGGGCGACGCCCGGCTGTTGCTG
GCGCTCGGGCGCCTGTGCGTGCGCGGCGAACTCTGGGGCAAGGCGCAGAA
CTACCTCGAGGCGAGCCTGTCCTTCGAGCCGGGACGCGAGAAGCACCTGG
CCCTCGCGCACCTCTTCGACAAGCTCGGCAAGGGCGCCGAGGCGAACCGG
CATTTCAGGATGGCGGCCGAATCCGCGACATAG
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