mRNA_P-wetherbeei_contig7599.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7599.1.1
Unique NamemRNA_P-wetherbeei_contig7599.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig7599.1.1 vs. uniprot
Match: D8LQV2_ECTSI (Putative peptidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQV2_ECTSI)

HSP 1 Score: 204 bits (519), Expect = 6.590e-62
Identity = 107/156 (68.59%), Postives = 127/156 (81.41%), Query Frame = 1
Query:    1 LQAVIAHELGHLKCEHGLWVTAANVLAMGLYSLGGPGEFLFRNLGLRRLLLQWSRAAEFTCDRAAMLVAQDVDVVVSVLLKLVGGSITQASELSVDAFLSQAAAYDAASRSRIGRLLRMNDE-GMTHPLPVVRARELSRWAEGVQYAGILRRGQPL 465
            +QAVIAHELGHLKCEHG+WVT A V+A GLY  G  G F+   LGLRR L++WSRAAEFTCDRAAMLVAQDV+VVVS LLKL GGS++QASELSV  FL QA+AYD AS++RIG+LL+      +THPLPVVRAREL +++E  QY G++RRG PL
Sbjct:  238 VQAVIAHELGHLKCEHGIWVTLATVVANGLYGRGFLGAFVADRLGLRRRLMRWSRAAEFTCDRAAMLVAQDVNVVVSTLLKLAGGSVSQASELSVPEFLKQASAYDLASQTRIGKLLKREQSLELTHPLPVVRARELVKFSESPQYLGLVRRGLPL 393          
BLAST of mRNA_P-wetherbeei_contig7599.1.1 vs. uniprot
Match: A0A835ZH31_9STRA (Peptidase family M48-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH31_9STRA)

HSP 1 Score: 185 bits (469), Expect = 9.360e-56
Identity = 101/157 (64.33%), Postives = 116/157 (73.89%), Query Frame = 1
Query:    1 LQAVIAHELGHLKCEHGLWVTAANVLAMGLY-SLGGPGEFLFRNLGLRRLLLQWSRAAEFTCDRAAMLVAQDVDVVVSVLLKLVGGSITQASELSVDAFLSQAAAYDAASRSRIGRLLRMNDEG-MTHPLPVVRARELSRWAEGVQYAGILRRGQPL 465
            LQAVIAHELGHLKCEHG+W+TAANVL  GL  S  G G  +   LGLRRLL +W   AE +CDRAA+LVAQDV+VVVS LLKLVGGS+  A ELSV  FL QA AYD ASR+R+GRLLR       THPLPV+RA+EL  W+   QY G+L+RG  L
Sbjct:  107 LQAVIAHELGHLKCEHGIWITAANVLTSGLARSAFGLGSVVAEALGLRRLLQRWRLTAELSCDRAALLVAQDVNVVVSTLLKLVGGSVRNADELSVHEFLKQAKAYDLASRTRLGRLLRSTVMAEATHPLPVIRAQELDTWSRSPQYLGVLKRGAEL 263          
BLAST of mRNA_P-wetherbeei_contig7599.1.1 vs. uniprot
Match: A0A6V1X7Z1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1X7Z1_HETAK)

HSP 1 Score: 172 bits (436), Expect = 5.260e-50
Identity = 93/161 (57.76%), Postives = 119/161 (73.91%), Query Frame = 1
Query:    1 LQAVIAHELGHLKCEHGLWVTAANVLAMGLYSLGG-PGEFLFRNLGLRRLLLQWSRAAEFTCDRAAMLVAQDVDVVVSVLLKLVGG----SITQASELSVDAFLSQAAAYDAASRSRIGRLLRMN-DEGMTHPLPVVRARELSRWAEGVQYAGILRRGQPL 465
            +QAV+AHELGH+KCEHGLW++AAN++A+GL ++GG PG+ L     L  L++ W RAAE TCDRAA+LVAQD  VVVS +LKLVGG    ++ +   +S D FL QA  Y  A  SR+GRLL  + D  +THPLPVVRA+EL+RWA G +Y G+LRRG PL
Sbjct:  175 VQAVLAHELGHIKCEHGLWLSAANLVALGLLAVGGVPGQLLSE--ALSSLIMPWQRAAELTCDRAALLVAQDPAVVVSTILKLVGGVGGPALGEYGGVSPDEFLKQAEEYAEARSSRVGRLLTADQDRALTHPLPVVRAQELARWARGPEYRGLLRRGAPL 333          
BLAST of mRNA_P-wetherbeei_contig7599.1.1 vs. uniprot
Match: A0A1S4DY00_CUCME (protease HtpX homolog isoform X2 n=1 Tax=Cucumis melo TaxID=3656 RepID=A0A1S4DY00_CUCME)

HSP 1 Score: 166 bits (421), Expect = 1.070e-48
Identity = 87/153 (56.86%), Postives = 113/153 (73.86%), Query Frame = 1
Query:    1 LQAVIAHELGHLKCEHGLWVTAANVLAMGLYSLGGPGEFLFRNLGLRRLLLQWSRAAEFTCDRAAMLVAQDVDVVVSVLLKLVGGSITQASELSVDAFLSQAAAYDAASRSRIGRLLR-MNDEGMTHPLPVVRARELSRWAEGVQYAGILRRG 456
            LQAV+AHELGHLKC+HG+W+T AN+L +G Y++ G G FL RNL     L +W RAAE TCDRAA+LVAQD  VV+SVL+KL GG  + A +L+VDAFL QA +YD AS S IG  +R      ++HPLPV+RARE+  W++G +Y  +L+RG
Sbjct:  103 LQAVLAHELGHLKCDHGVWLTFANILTVGAYTVPGFGGFLARNL--EEQLFRWLRAAELTCDRAALLVAQDSKVVISVLMKLAGGCPSIADQLNVDAFLEQARSYDKASSSPIGWYIRNAQTRQLSHPLPVLRAREIDDWSKGQEYKNLLKRG 253          
BLAST of mRNA_P-wetherbeei_contig7599.1.1 vs. uniprot
Match: A0A0A0L8A1_CUCSA (Peptidase_M48 domain-containing protein n=4 Tax=Benincaseae TaxID=1003877 RepID=A0A0A0L8A1_CUCSA)

HSP 1 Score: 166 bits (421), Expect = 7.230e-48
Identity = 87/153 (56.86%), Postives = 113/153 (73.86%), Query Frame = 1
Query:    1 LQAVIAHELGHLKCEHGLWVTAANVLAMGLYSLGGPGEFLFRNLGLRRLLLQWSRAAEFTCDRAAMLVAQDVDVVVSVLLKLVGGSITQASELSVDAFLSQAAAYDAASRSRIGRLLR-MNDEGMTHPLPVVRARELSRWAEGVQYAGILRRG 456
            LQAV+AHELGHLKC+HG+W+T AN+L +G Y++ G G FL RNL     L +W RAAE TCDRAA+LVAQD  VV+SVL+KL GG  + A +L+VDAFL QA +YD AS S IG  +R      ++HPLPV+RARE+  W++G +Y  +L+RG
Sbjct:  175 LQAVLAHELGHLKCDHGVWLTFANILTVGAYTVPGLGGFLARNL--EEQLFRWLRAAELTCDRAALLVAQDSKVVISVLMKLAGGCPSIADQLNVDAFLEQARSYDKASSSPIGWYIRNAQTRQLSHPLPVLRAREVDDWSKGQEYKNLLKRG 325          
BLAST of mRNA_P-wetherbeei_contig7599.1.1 vs. uniprot
Match: A0A6J1JKT7_CUCMA (uncharacterized protein LOC111486687 n=4 Tax=Cucurbitaceae TaxID=3650 RepID=A0A6J1JKT7_CUCMA)

HSP 1 Score: 165 bits (417), Expect = 2.540e-47
Identity = 85/153 (55.56%), Postives = 113/153 (73.86%), Query Frame = 1
Query:    1 LQAVIAHELGHLKCEHGLWVTAANVLAMGLYSLGGPGEFLFRNLGLRRLLLQWSRAAEFTCDRAAMLVAQDVDVVVSVLLKLVGGSITQASELSVDAFLSQAAAYDAASRSRIGRLLR-MNDEGMTHPLPVVRARELSRWAEGVQYAGILRRG 456
            LQAV+AHELGHLKC+HG+W+T AN+L +G Y++ G G FL RNL     L +W RAAE TCDRAA+LVAQD  VV+SVL+KL GG  + A++L+VDAFL QA +YD AS S +G  +R      ++HPLPV+RARE+  W++  +Y  +L+RG
Sbjct:  170 LQAVLAHELGHLKCDHGVWLTFANILTLGAYTVPGLGGFLARNL--EEQLFRWLRAAELTCDRAALLVAQDSKVVISVLMKLAGGCPSIANQLNVDAFLEQARSYDKASSSPVGWYIRNAQTRQLSHPLPVLRAREIDDWSKSQEYKNLLKRG 320          
BLAST of mRNA_P-wetherbeei_contig7599.1.1 vs. uniprot
Match: A0A4D9CNP9_9STRA (Peptidase_M48 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CNP9_9STRA)

HSP 1 Score: 166 bits (420), Expect = 4.350e-47
Identity = 91/155 (58.71%), Postives = 113/155 (72.90%), Query Frame = 1
Query:    1 LQAVIAHELGHLKCEHGLWVTAANVLAMGLYSLGGPGEFLFRNLG--LRRLLLQWSRAAEFTCDRAAMLVAQDVDVVVSVLLKLVGGSITQASELSVDAFLSQAAAYDAASRSRIGRLLRMNDE-GMTHPLPVVRARELSRWAEGVQYAGILRRG 456
            +Q V+AHEL H+KCEHG+++TAAN LA+GLYSLGG    L R LG  L  LL  W RAAEF+CDR A+LV+QD+D V+S LLKLVGGS   A +LS +AFL QA +YD A  S +GRL++   E G+THPLPV+R REL RW +   Y GI+ RG
Sbjct:  208 VQVVLAHELSHIKCEHGVFITAANALALGLYSLGGS---LGRVLGDRLSSLLYAWLRAAEFSCDRGALLVSQDLDTVLSALLKLVGGSQQLAGQLSTEAFLQQARSYDQAVGSPLGRLIKSQMEPGLTHPLPVLRVRELERWYKSDMYTGIIARG 359          
BLAST of mRNA_P-wetherbeei_contig7599.1.1 vs. uniprot
Match: A0A2R6X6J6_MARPO (Peptidase_M48 domain-containing protein n=1 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6X6J6_MARPO)

HSP 1 Score: 164 bits (416), Expect = 4.360e-47
Identity = 84/150 (56.00%), Postives = 112/150 (74.67%), Query Frame = 1
Query:    1 LQAVIAHELGHLKCEHGLWVTAANVLAMGLYSLGGPGEFLFRNLGLRRLLLQWSRAAEFTCDRAAMLVAQDVDVVVSVLLKLVGGSITQASELSVDAFLSQAAAYDAASRSRIGRLLR-MNDEGMTHPLPVVRARELSRWAEGVQYAGIL 447
            LQAV+AHELGHLKC+HG+W+T AN++AMG YSL G G FL RNL     L++W RAAE TCDRAA+LVAQD +VV+SVL+KL GG  + + +L+VDAFL QA +Y+ AS+S +G  LR      ++HPLPV+RA E+ +W+   +Y  +L
Sbjct:  168 LQAVLAHELGHLKCDHGIWLTFANIVAMGAYSLPGLGAFLARNL--EEQLMRWVRAAELTCDRAALLVAQDPEVVISVLMKLAGGCPSLSGQLNVDAFLKQARSYEEASQSPLGWYLRNAQTRQLSHPLPVLRALEIDQWSRSAEYKALL 315          
BLAST of mRNA_P-wetherbeei_contig7599.1.1 vs. uniprot
Match: A0A7C8ZCP2_OPUST (Peptidase_M48 domain-containing protein n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C8ZCP2_OPUST)

HSP 1 Score: 162 bits (411), Expect = 7.590e-47
Identity = 84/155 (54.19%), Postives = 112/155 (72.26%), Query Frame = 1
Query:    1 LQAVIAHELGHLKCEHGLWVTAANVLAMGLYSLGGPGEFLFRNLGLRRLLLQWSRAAEFTCDRAAMLVAQDVDVVVSVLLKLVGGSITQASELSVDAFLSQAAAYDAASRSRIGRLLR-MNDEGMTHPLPVVRARELSRWAEGVQYAGILRRGQP 462
            LQAV+AHELGHLKC HGLW+T AN+LA+G Y++ G G F+ R +     LL+W RAAE TCDRAA+LVAQD  +V+SVL+KL GG  + A +LSVDAFL QA +YD AS + +G  +R    + ++HPLPV+RARE+  W+   +Y  +L+R  P
Sbjct:  132 LQAVLAHELGHLKCNHGLWLTYANILALGAYTIPGFGGFIARRI--EEQLLRWLRAAELTCDRAALLVAQDPRIVISVLMKLAGGCPSIADQLSVDAFLEQARSYDKASSNPLGWYIRNAQTQQLSHPLPVLRAREVDEWSRSREYNNLLKRALP 284          
BLAST of mRNA_P-wetherbeei_contig7599.1.1 vs. uniprot
Match: UPI0010A2FD18 (uncharacterized protein LOC114728592 isoform X1 n=1 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A2FD18)

HSP 1 Score: 164 bits (414), Expect = 8.070e-47
Identity = 84/156 (53.85%), Postives = 110/156 (70.51%), Query Frame = 1
Query:    1 LQAVIAHELGHLKCEHGLWVTAANVLAMGLYSLGGPGEFLFRNLGLRRLLLQWSRAAEFTCDRAAMLVAQDVDVVVSVLLKLVGGSITQASELSVDAFLSQAAAYDAASRSRIGRLLR-MNDEGMTHPLPVVRARELSRWAEGVQYAGILRRGQPL 465
            LQAV+AHELGHLKC+HG+W+T AN+L +G Y++ G G F+ R L     L +W RAAE TCDRAA+LVAQD  +VVSVL+KL GG  + A +L+VDAFL QA +YD AS S +G  LR      ++HPLP +RARE+  W+    Y  +L+RG P+
Sbjct:  175 LQAVLAHELGHLKCDHGVWLTYANILTLGAYTVPGIGGFIARTL--EEQLFRWLRAAELTCDRAALLVAQDPKIVVSVLMKLAGGCPSMADQLNVDAFLEQARSYDKASSSPVGWYLRNAQTRQLSHPLPALRAREIDEWSRSPAYKSLLKRGLPI 328          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7599.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQV2_ECTSI6.590e-6268.59Putative peptidase n=1 Tax=Ectocarpus siliculosus ... [more]
A0A835ZH31_9STRA9.360e-5664.33Peptidase family M48-domain-containing protein n=1... [more]
A0A6V1X7Z1_HETAK5.260e-5057.76Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A1S4DY00_CUCME1.070e-4856.86protease HtpX homolog isoform X2 n=1 Tax=Cucumis m... [more]
A0A0A0L8A1_CUCSA7.230e-4856.86Peptidase_M48 domain-containing protein n=4 Tax=Be... [more]
A0A6J1JKT7_CUCMA2.540e-4755.56uncharacterized protein LOC111486687 n=4 Tax=Cucur... [more]
A0A4D9CNP9_9STRA4.350e-4758.71Peptidase_M48 domain-containing protein n=2 Tax=Mo... [more]
A0A2R6X6J6_MARPO4.360e-4756.00Peptidase_M48 domain-containing protein n=1 Tax=Ma... [more]
A0A7C8ZCP2_OPUST7.590e-4754.19Peptidase_M48 domain-containing protein n=1 Tax=Op... [more]
UPI0010A2FD188.070e-4753.85uncharacterized protein LOC114728592 isoform X1 n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7599contigP-wetherbeei_contig7599:301..943 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LQV2
PFAMsPeptidase_M48
Model size465
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue1.08e-62
EggNOG OGsCOG0501@1|root,2QUG6@2759|Eukaryota
DescriptionPeptidase family M48
Cds size465
COG categoryE
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186990.1773527-CDS-P-wetherbeei_contig7599:300..5671683186990.1773527-CDS-P-wetherbeei_contig7599:300..567Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7599 301..567 +
1683186990.1881444-CDS-P-wetherbeei_contig7599:745..9431683186990.1881444-CDS-P-wetherbeei_contig7599:745..943Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7599 746..943 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7599.1.1prot_P-wetherbeei_contig7599.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7599 301..943 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7599.1.1

>prot_P-wetherbeei_contig7599.1.1 ID=prot_P-wetherbeei_contig7599.1.1|Name=mRNA_P-wetherbeei_contig7599.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=155bp
LQAVIAHELGHLKCEHGLWVTAANVLAMGLYSLGGPGEFLFRNLGLRRLL
LQWSRAAEFTCDRAAMLVAQDVDVVVSVLLKLVGGSITQASELSVDAFLS
QAAAYDAASRSRIGRLLRMNDEGMTHPLPVVRARELSRWAEGVQYAGILR
RGQPL
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mRNA from alignment at P-wetherbeei_contig7599:301..943+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7599.1.1 ID=mRNA_P-wetherbeei_contig7599.1.1|Name=mRNA_P-wetherbeei_contig7599.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=643bp|location=Sequence derived from alignment at P-wetherbeei_contig7599:301..943+ (Phaeothamnion wetherbeei SAG_119_79)
TTGCAGGCGGTAATCGCCCACGAGCTCGGCCACCTGAAGTGCGAGCACGG GCTGTGGGTCACGGCCGCCAACGTTCTGGCCATGGGCCTCTACAGCCTGG GCGGTCCCGGCGAGTTCCTCTTCCGGAATCTCGGCCTACGGCGGCTTTTG CTGCAGTGGTCGCGCGCCGCCGAGTTCACCTGCGACCGCGCGGCTATGCT GGTGGCGCAGGACGTTGACGTTGTCGTCTCGGTTCTCTTAAAGCTTGTCG GCGGCAGCATCACGCAGGTCATTTTACTTTTGTATTGGTGCAATCGCCAT TTTGTTCTTTTGCGGTCATGACGCTTGACATTAAATTTTCAAAAATATGA TCGGATAAATGATCTTGCCTTATAGGAAGGTTTTTTGTTTACTTCTCTAT TCCGAAAGGTATCATCGTCGAATGGTCTAAACTCACTTTACGCAGGCGTC GGAGCTCAGCGTGGACGCATTCCTCAGCCAAGCGGCTGCGTACGACGCGG CGAGCCGCTCACGGATCGGGCGGCTGTTGCGGATGAACGACGAGGGGATG ACGCACCCGCTGCCGGTGGTGCGGGCACGGGAGCTCAGCCGGTGGGCGGA AGGCGTGCAATACGCCGGCATCCTCCGGCGCGGCCAGCCGTTG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig7599:301..943+

>mRNA_P-wetherbeei_contig7599.1.1 ID=mRNA_P-wetherbeei_contig7599.1.1|Name=mRNA_P-wetherbeei_contig7599.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=465bp|location=Sequence derived from alignment at P-wetherbeei_contig7599:301..943+ (Phaeothamnion wetherbeei SAG_119_79)
TTGCAGGCGGTAATCGCCCACGAGCTCGGCCACCTGAAGTGCGAGCACGG
GCTGTGGGTCACGGCCGCCAACGTTCTGGCCATGGGCCTCTACAGCCTGG
GCGGTCCCGGCGAGTTCCTCTTCCGGAATCTCGGCCTACGGCGGCTTTTG
CTGCAGTGGTCGCGCGCCGCCGAGTTCACCTGCGACCGCGCGGCTATGCT
GGTGGCGCAGGACGTTGACGTTGTCGTCTCGGTTCTCTTAAAGCTTGTCG
GCGGCAGCATCACGCAGGCGTCGGAGCTCAGCGTGGACGCATTCCTCAGC
CAAGCGGCTGCGTACGACGCGGCGAGCCGCTCACGGATCGGGCGGCTGTT
GCGGATGAACGACGAGGGGATGACGCACCCGCTGCCGGTGGTGCGGGCAC
GGGAGCTCAGCCGGTGGGCGGAAGGCGTGCAATACGCCGGCATCCTCCGG
CGCGGCCAGCCGTTG
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