mRNA_P-wetherbeei_contig7579.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7579.2.1
Unique NamemRNA_P-wetherbeei_contig7579.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig7579.2.1 vs. uniprot
Match: A0A3C0TRK3_9PROT (LuxR family transcriptional regulator n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TRK3_9PROT)

HSP 1 Score: 410 bits (1055), Expect = 4.240e-143
Identity = 200/256 (78.12%), Postives = 222/256 (86.72%), Query Frame = 1
Query:    1 MLVDSHCHLDFPEFASEMDLVVRRAGQAGVGMMLTICTRISAFDSILAVANRYDHIYCSVGIHPHEAGTEPAMDCARIAALTAHDKVIGIGETGLDYFYEHSPRENQKISFRAHIQAARQTGLPLIVHARDADADTIEILRFEAGRGAFPGVIHCFTAGPELARAALDLGLYISLSGIATFKSARDLRETAKMIPADRLLIETDAPFLAPMPHRGKRCEPAFVADTARYLAEFFGETQEDFAARTTDNFFNLFTKA 768
            MLVDSHCHLDFP+F  +   V+RRA  A +GMMLTICTRIS F+ I A+A  +DHIYCSVGIHPHEA  EPA+D +RIAALT H KVIGIGETGLDY+YEH  RE QK SF AHI A+R+TGLPLIVHARDAD D I ILR EAG+GAFPGVIHCFTAG ELARAALDLG+YISLSGI TFK+A+DLRETA+MIP DRLLIETDAPFLAP+PHRGKR EPAFVADTARYLAEFFGET+E+FA+RTT+NFF LF KA
Sbjct:    1 MLVDSHCHLDFPDFNGDRKDVLRRAAMADIGMMLTICTRISVFERIRAIAEEFDHIYCSVGIHPHEADNEPAVDASRIAALTDHPKVIGIGETGLDYYYEHGSREAQKSSFGAHIAASRETGLPLIVHARDADEDMIAILRDEAGKGAFPGVIHCFTAGAELARAALDLGMYISLSGIVTFKNAKDLRETARMIPPDRLLIETDAPFLAPVPHRGKRNEPAFVADTARYLAEFFGETREEFASRTTENFFRLFRKA 256          
BLAST of mRNA_P-wetherbeei_contig7579.2.1 vs. uniprot
Match: A0A3B9BMT5_9PROT (LuxR family transcriptional regulator n=3 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3B9BMT5_9PROT)

HSP 1 Score: 356 bits (914), Expect = 1.270e-121
Identity = 174/258 (67.44%), Postives = 205/258 (79.46%), Query Frame = 1
Query:    1 MLVDSHCHLDFPEFASEMDLVVRRAGQAGVGMMLTICTRISAFDSILAVANRYDHIYCSVGIHPHEAGTEPAMDCARIAALTAHDKVIGIGETGLDYFYEHSPRENQKISFRAHIQAARQTGLPLIVHARDADADTIEILRFEAGRGAFPGVIHCFTAGPELARAALDLGLYISLSGIATFKSARDLRETAKMIPADRLLIETDAPFLAPMPHRGKRCEPAFVADTARYLAEFFGETQEDFAARTTDNFFNLFTKADR 774
            MLVDSHCHLDFPEFA ++D VV RA  AGVG M+TICT ++ F  + AVA R+ +I+C+VGIHPHEA +EP  D A +  L   DKV+GIGETGLDY+Y+++PR  Q+ +FRAHI AAR TGLPLIVH+RDAD DTI ILR EA +GAFPG+IHCFTAGPELARAA+DLGLYISLSGI TFKSA DLRETA+ IP +RLL+ETDAPFLAP+P RGK  EPA+VA TA Y+AE  G      A  TTDNFF LF++A R
Sbjct:    1 MLVDSHCHLDFPEFADDLDGVVARAEAAGVGTMVTICTHVTKFAQVQAVARRFPNIFCTVGIHPHEAESEPDTDAATLITLAGSDKVVGIGETGLDYYYDNAPRAAQRRAFRAHIAAARATGLPLIVHSRDADEDTIAILREEADKGAFPGLIHCFTAGPELARAAIDLGLYISLSGIVTFKSAADLRETARQIPHERLLVETDAPFLAPVPRRGKTNEPAYVAHTAAYVAEMLGMEPAALADLTTDNFFRLFSRAHR 258          
BLAST of mRNA_P-wetherbeei_contig7579.2.1 vs. uniprot
Match: A0A1G7Y824_9PROT (TatD DNase family protein n=1 Tax=Roseospirillum parvum TaxID=83401 RepID=A0A1G7Y824_9PROT)

HSP 1 Score: 353 bits (905), Expect = 3.060e-120
Identity = 166/257 (64.59%), Postives = 202/257 (78.60%), Query Frame = 1
Query:    4 LVDSHCHLDFPEFASEMDLVVRRAGQAGVGMMLTICTRISAFDSILAVANRYDHIYCSVGIHPHEAGTEPAMDCARIAALTAHDKVIGIGETGLDYFYEHSPRENQKISFRAHIQAARQTGLPLIVHARDADADTIEILRFEAGRGAFPGVIHCFTAGPELARAALDLGLYISLSGIATFKSARDLRETAKMIPADRLLIETDAPFLAPMPHRGKRCEPAFVADTARYLAEFFGETQEDFAARTTDNFFNLFTKADR 774
            LVDSHCHLDFP+FA E+D VV RAG+AG+G MLTICT ++ F  + A+A+R+D ++CSVGIHPHEAG EPA D AR+  L    KV+G GETGL+YFYEHSPR +Q+ +FRAHIQAAR+TGLPLI+H+RDADAD   ILR EAG+GAFPG++HCF++GPELA  AL+LGLY+S SGI TF  A  LRE AK +P +R+L+ETDAP+LAP+P RGKR EPAF   TA  LAE  G    D AA+TT+NFF LF K  R
Sbjct:    7 LVDSHCHLDFPDFAEELDEVVARAGRAGIGTMLTICTHVTRFQQVRALAHRFDAVWCSVGIHPHEAGREPATDAARLIELADDPKVVGFGETGLEYFYEHSPRADQQRAFRAHIQAARETGLPLIIHSRDADADMAAILREEAGQGAFPGLVHCFSSGPELAETALELGLYLSFSGIVTFPKAEALREVAKTVPPERILVETDAPYLAPVPKRGKRNEPAFTVHTATRLAEVLGMEVADLAAQTTENFFTLFGKVQR 263          
BLAST of mRNA_P-wetherbeei_contig7579.2.1 vs. uniprot
Match: UPI00115F1649 (TatD family hydrolase n=1 Tax=Telmatospirillum sp. J64-1 TaxID=2502183 RepID=UPI00115F1649)

HSP 1 Score: 346 bits (888), Expect = 1.100e-117
Identity = 163/255 (63.92%), Postives = 198/255 (77.65%), Query Frame = 1
Query:    1 MLVDSHCHLDFPEFASEMDLVVRRAGQAGVGMMLTICTRISAFDSILAVANRYDHIYCSVGIHPHEAGTEPAMDCARIAALTAHDKVIGIGETGLDYFYEHSPRENQKISFRAHIQAARQTGLPLIVHARDADADTIEILRFEAGRGAFPGVIHCFTAGPELARAALDLGLYISLSGIATFKSARDLRETAKMIPADRLLIETDAPFLAPMPHRGKRCEPAFVADTARYLAEFFGETQEDFAARTTDNFFNLFTK 765
            MLVDSHCHLDFP+FA E+D VV RAG AGVG+MLTICT ++ F+ +LAVA RY  +YC+VGIHPHEAG EP  D AR+  +  H KV+G GETGLDYFY+HSPR+ Q+ SFRAHI+AAR+TGLP+++H RDAD DT  I+  E G+GAFPG+IHCF++GPELA  A+  GLYISLSGI TFK+A  +RET K +P D+LL+ETD+PFLAP+P RGKR EP+FVA TA  LAE         A  TT+NFF LF K
Sbjct:    1 MLVDSHCHLDFPDFAEELDDVVARAGDAGVGLMLTICTHVTRFEQVLAVAERYPQVYCTVGIHPHEAGNEPDTDAARLIEMAQHPKVVGFGETGLDYFYDHSPRDRQQASFRAHIRAARETGLPVVIHTRDADEDTARIITEEMGQGAFPGLIHCFSSGPELADIAVKNGLYISLSGILTFKTAEPIRETVKGLPLDKLLVETDSPFLAPIPKRGKRNEPSFVAYTAAKLAELKDTDSAAIAEVTTENFFRLFAK 255          
BLAST of mRNA_P-wetherbeei_contig7579.2.1 vs. uniprot
Match: A0A081BFD4_9HYPH (TatD family hydrolase n=1 Tax=Tepidicaulis marinus TaxID=1333998 RepID=A0A081BFD4_9HYPH)

HSP 1 Score: 345 bits (886), Expect = 2.290e-117
Identity = 164/258 (63.57%), Postives = 205/258 (79.46%), Query Frame = 1
Query:    1 MLVDSHCHLDFPEFASEMDLVVRRAGQAGVGMMLTICTRISAFDSILAVANRYDHIYCSVGIHPHEAGTEPAMDCARIAALTAHDKVIGIGETGLDYFYEHSPRENQKISFRAHIQAARQTGLPLIVHARDADADTIEILRFEAGRGAFPGVIHCFTAGPELARAALDLGLYISLSGIATFKSARDLRETAKMIPADRLLIETDAPFLAPMPHRGKRCEPAFVADTARYLAEFFGETQEDFAARTTDNFFNLFTKADR 774
            +LVDSHCHLDF +F  E D +V+RAG AGVG+M+TI T+++ FD +LAVA RYD+I+C+VGIHPHEA +EP +D AR+  L+ H KV+GIGETGLDY+YEHSPRE Q+ +FR+HI AAR+TGLPLIVH R+ADADT  IL  E   GAFPG++HCF++G  LA  A+DLGLYISLSGI TFKSA D+R+TA  +P +RLL+ETD+P+LAP+P RGKR EP+FV  TA  LAE  G ++ + A  TTDNFF LFTK  R
Sbjct:    3 LLVDSHCHLDFKDFDGETDAIVQRAGAAGVGLMVTIGTKVTEFDKVLAVAERYDNIFCTVGIHPHEAESEPEVDAARLIELSRHPKVVGIGETGLDYYYEHSPREAQQKNFRSHIWAARETGLPLIVHTREADADTDRILSEEMAEGAFPGLLHCFSSGRALAMKAVDLGLYISLSGILTFKSAEDIRQTAADVPLERLLVETDSPYLAPVPKRGKRNEPSFVVHTAAKLAEIKGVSEGELAGATTDNFFRLFTKVPR 260          
BLAST of mRNA_P-wetherbeei_contig7579.2.1 vs. uniprot
Match: A0A3D4F3W2_9HYPH (LuxR family transcriptional regulator n=1 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A3D4F3W2_9HYPH)

HSP 1 Score: 345 bits (886), Expect = 2.460e-117
Identity = 166/256 (64.84%), Postives = 200/256 (78.12%), Query Frame = 1
Query:    1 MLVDSHCHLDFPEFASEMDLVVRRAGQAGVGMMLTICTRISAFDSILAVANRYDHIYCSVGIHPHEAGTEPAMDCARIAALTAHDKVIGIGETGLDYFYEHSPRENQKISFRAHIQAARQTGLPLIVHARDADADTIEILRFEAGRGAFPGVIHCFTAGPELARAALDLGLYISLSGIATFKSARDLRETAKMIPADRLLIETDAPFLAPMPHRGKRCEPAFVADTARYLAEFFGETQEDFAARTTDNFFNLFTKA 768
            MLVDSHCHLDF +F  + + VV RA  AG+G+M+TI T+I+  + I+A+A RYD + CSVGIHPHEAG EP      I  L+ H KV+G+GETGLDYFYEHSPR+ Q+ +FRAHI AAR+TGLPLIVHARDAD DT +IL  E  +GAFPG+IHCFTAGPELA+ ALD+G YIS+SGIATFK+A  LR+T +M+P DRLL+ETDAPFLAP+PHRGKR EP+FVADTA  LA  F       A +TT NFF LF+KA
Sbjct:    1 MLVDSHCHLDFDDFDEDRNDVVARARAAGIGLMVTISTKITEAEKIIALAERYDDVVCSVGIHPHEAGNEPPTSADDIVRLSRHPKVVGVGETGLDYFYEHSPRDAQQRNFRAHIAAARETGLPLIVHARDADIDTADILEDEMAKGAFPGLIHCFTAGPELAQRALDIGFYISISGIATFKNAETLRQTIRMVPEDRLLVETDAPFLAPVPHRGKRNEPSFVADTATALATLFETDYATLANQTTQNFFRLFSKA 256          
BLAST of mRNA_P-wetherbeei_contig7579.2.1 vs. uniprot
Match: A0A3C1BKM3_9HYPH (LuxR family transcriptional regulator n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A3C1BKM3_9HYPH)

HSP 1 Score: 345 bits (884), Expect = 4.170e-117
Identity = 164/256 (64.06%), Postives = 202/256 (78.91%), Query Frame = 1
Query:    1 MLVDSHCHLDFPEFASEMDLVVRRAGQAGVGMMLTICTRISAFDSILAVANRYDHIYCSVGIHPHEAGTEPAMDCARIAALTAHDKVIGIGETGLDYFYEHSPRENQKISFRAHIQAARQTGLPLIVHARDADADTIEILRFEAGRGAFPGVIHCFTAGPELARAALDLGLYISLSGIATFKSARDLRETAKMIPADRLLIETDAPFLAPMPHRGKRCEPAFVADTARYLAEFFGETQEDFAARTTDNFFNLFTKA 768
            MLVDSHCHLDF +F ++ + V+ RA  AGVG+M+TI T+I+  D I+A+A  +D + CS+GIHPHEAG+EP    + +  L+AH KV+GIGETGLDY+YEHSPR+ Q+ +FRAHI AAR+TGLPLIVHARDAD DT +IL  E   G FPG+IHCFTAGPELA+ ALD+G YIS+SGIATFK+A  LR+T   +P DRLL+ETD+P+LAP+PHRGKR EP+FVADTA  LA  F    E  AARTTDNF+ LFTKA
Sbjct:    1 MLVDSHCHLDFDDFDADREAVLTRARAAGVGLMVTISTKITLADKIIALAEAHDDVVCSLGIHPHEAGSEPETPASELVRLSAHPKVVGIGETGLDYYYEHSPRDAQQRNFRAHIAAARETGLPLIVHARDADTDTADILEDEMKNGGFPGLIHCFTAGPELAKRALDIGFYISISGIATFKNAETLRQTILTVPQDRLLVETDSPYLAPVPHRGKRNEPSFVADTAGALATLFDTDFETLAARTTDNFYRLFTKA 256          
BLAST of mRNA_P-wetherbeei_contig7579.2.1 vs. uniprot
Match: A0A7X2FYX8_9PROT (YchF/TatD family DNA exonuclease n=1 Tax=Alphaproteobacteria bacterium HT1-32 TaxID=2665153 RepID=A0A7X2FYX8_9PROT)

HSP 1 Score: 344 bits (883), Expect = 5.710e-117
Identity = 168/258 (65.12%), Postives = 199/258 (77.13%), Query Frame = 1
Query:    1 MLVDSHCHLDFPEFASEMDLVVRRAGQAGVGMMLTICTRISAFDSILAVANRYDHIYCSVGIHPHEAGTEPAMDCARIAALTAHDKVIGIGETGLDYFYEHSPRENQKISFRAHIQAARQTGLPLIVHARDADADTIEILRFEAGRGAFPGVIHCFTAGPELARAALDLGLYISLSGIATFKSARDLRETAKMIPADRLLIETDAPFLAPMPHRGKRCEPAFVADTARYLAEFFGETQEDFAARTTDNFFNLFTKADR 774
            MLVDSHCHLDFP+FA + D V+ RA  A +  +LTICT ++ F  I A+A  +DHI+CSVGIHPHEA +EP +  A +A L+ H K IGIGETGLDYFYEHSP+  Q+ +FRAHI+A++ TGLPLIVHARDAD DTI ILR     GAFPGVIHCFTAGPELAR A++LGLYIS+SGI TFK A DLR T   IP DRLL+ETDAP+LAPMP+RGKR EP+FV  TA  +AE  G T +D A  TTDNF+ LF+KA R
Sbjct:    1 MLVDSHCHLDFPDFAEDFDGVLSRAEDADIESILTICTHVTKFGQIRAIAEAHDHIWCSVGIHPHEAESEPPVTGAELAGLSVHPKCIGIGETGLDYFYEHSPKAEQQRNFRAHIEASQDTGLPLIVHARDADDDTIHILRETMSAGAFPGVIHCFTAGPELARVAVELGLYISISGIVTFKKAEDLRSTIAGIPLDRLLVETDAPYLAPMPNRGKRNEPSFVQHTAAKVAEVKGVTPDDLARITTDNFYRLFSKARR 258          
BLAST of mRNA_P-wetherbeei_contig7579.2.1 vs. uniprot
Match: K2K067_9PROT (TatD family hydrolase n=3 Tax=Oceanibaculum TaxID=659693 RepID=K2K067_9PROT)

HSP 1 Score: 344 bits (882), Expect = 8.990e-117
Identity = 161/255 (63.14%), Postives = 199/255 (78.04%), Query Frame = 1
Query:    1 MLVDSHCHLDFPEFASEMDLVVRRAGQAGVGMMLTICTRISAFDSILAVANRYDHIYCSVGIHPHEAGTEPAMDCARIAALTAHDKVIGIGETGLDYFYEHSPRENQKISFRAHIQAARQTGLPLIVHARDADADTIEILRFEAGRGAFPGVIHCFTAGPELARAALDLGLYISLSGIATFKSARDLRETAKMIPADRLLIETDAPFLAPMPHRGKRCEPAFVADTARYLAEFFGETQEDFAARTTDNFFNLFTK 765
            MLVDSHCHLDFP+F  E+D VV RA  AGVG M+TICT+I+ F+ + A+A RYD IYC+VGIHPHEA ++P +D AR+     H KV+GIGETGLDYFYEHS R+ Q+ SFRAHIQA+R+TGLPL+VH RDAD DT+ IL+ E G+G +PG+IHCF++   LA   L LGLYISLSGI TFK A +LRET K +P DR+L+ETD+P+LAP+PHRGKR EPAFVA TA+ +AE  G    +  ARTT+NF +LF K
Sbjct:    1 MLVDSHCHLDFPDFGEELDAVVARARAAGVGRMVTICTKITEFERVRAIAERYDDIYCTVGIHPHEADSQPEIDTARLVEAARHPKVVGIGETGLDYFYEHSARQAQQRSFRAHIQASRETGLPLVVHTRDADEDTVAILKDEIGQGDYPGLIHCFSSSAWLAEECLKLGLYISLSGIVTFKKAEELRETVKALPLDRILVETDSPYLAPVPHRGKRNEPAFVAHTAKVVAELKGVGMAEIEARTTENFLHLFNK 255          
BLAST of mRNA_P-wetherbeei_contig7579.2.1 vs. uniprot
Match: UPI00187272AF (TatD family hydrolase n=1 Tax=Pelagibius sp. NBU2595 TaxID=2762760 RepID=UPI00187272AF)

HSP 1 Score: 343 bits (880), Expect = 2.230e-116
Identity = 166/257 (64.59%), Postives = 201/257 (78.21%), Query Frame = 1
Query:    4 LVDSHCHLDFPEFASEMDLVVRRAGQAGVGMMLTICTRISAFDSILAVANRYDHIYCSVGIHPHEAGTEPAMDCARIAALTAHDKVIGIGETGLDYFYEHSPRENQKISFRAHIQAARQTGLPLIVHARDADADTIEILRFEAGRGAFPGVIHCFTAGPELARAALDLGLYISLSGIATFKSARDLRETAKMIPADRLLIETDAPFLAPMPHRGKRCEPAFVADTARYLAEFFGETQEDFAARTTDNFFNLFTKADR 774
            LVDSHCHLD+ E   E++ VV RA  AGVG M+TICT++S FD I A+A R+  +YCSVG+HPHEAG E     AR+  L AHDKV+GIGETGLDY+YEHSPRE Q++SFR+HI AAR+TGLPLIVHARDAD DT+ +L+ E  +GAFPGVIHCFTAGPELAR AL++G YISL+GI TFKSA  LR+T + +P DRLL+ETDAP+L P+P RGK  EPA V  TA+ LAE  G    DFA +TT+NFF LF++A R
Sbjct:   13 LVDSHCHLDYLERDGEIEPVVARALDAGVGTMVTICTKLSEFDRIEAIARRFPRVYCSVGVHPHEAGKEGQETPARLIELAAHDKVVGIGETGLDYYYEHSPREAQQVSFRSHIAAARETGLPLIVHARDADDDTVAVLQDEYAKGAFPGVIHCFTAGPELARTALEIGFYISLAGIVTFKSAESLRDTVREVPLDRLLVETDAPYLTPVPKRGKTNEPANVVYTAQALAELRGVAAADFADQTTENFFRLFSRAAR 269          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7579.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3C0TRK3_9PROT4.240e-14378.13LuxR family transcriptional regulator n=1 Tax=Alph... [more]
A0A3B9BMT5_9PROT1.270e-12167.44LuxR family transcriptional regulator n=3 Tax=Alph... [more]
A0A1G7Y824_9PROT3.060e-12064.59TatD DNase family protein n=1 Tax=Roseospirillum p... [more]
UPI00115F16491.100e-11763.92TatD family hydrolase n=1 Tax=Telmatospirillum sp.... [more]
A0A081BFD4_9HYPH2.290e-11763.57TatD family hydrolase n=1 Tax=Tepidicaulis marinus... [more]
A0A3D4F3W2_9HYPH2.460e-11764.84LuxR family transcriptional regulator n=1 Tax=Rhod... [more]
A0A3C1BKM3_9HYPH4.170e-11764.06LuxR family transcriptional regulator n=2 Tax=Hyph... [more]
A0A7X2FYX8_9PROT5.710e-11765.12YchF/TatD family DNA exonuclease n=1 Tax=Alphaprot... [more]
K2K067_9PROT8.990e-11763.14TatD family hydrolase n=3 Tax=Oceanibaculum TaxID=... [more]
UPI00187272AF2.230e-11664.59TatD family hydrolase n=1 Tax=Pelagibius sp. NBU25... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7579contigP-wetherbeei_contig7579:1770..2561 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1333998.M2A_3251
Preferred nametatD
PFAMsTatD_DNase
Model size792
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K03424
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004518,GO:0004536,GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016787,GO:0016788,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901361,GO:1901575
Exons1
Evalue3.76e-118
EggNOG OGsCOG0084@1|root,COG0084@2|Bacteria,1MUC0@1224|Proteobacteria,2TS88@28211|Alphaproteobacteria,4BPRR@82117|unclassified Alphaproteobacteria
DescriptionHydrolase, TatD family
Cds size792
COG categoryL
BRITEko00000,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186989.2519326-CDS-P-wetherbeei_contig7579:1769..25611683186989.2519326-CDS-P-wetherbeei_contig7579:1769..2561Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7579 1770..2561 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7579.2.1prot_P-wetherbeei_contig7579.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7579 1770..2561 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7579.2.1

>prot_P-wetherbeei_contig7579.2.1 ID=prot_P-wetherbeei_contig7579.2.1|Name=mRNA_P-wetherbeei_contig7579.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=264bp
MLVDSHCHLDFPEFASEMDLVVRRAGQAGVGMMLTICTRISAFDSILAVA
NRYDHIYCSVGIHPHEAGTEPAMDCARIAALTAHDKVIGIGETGLDYFYE
HSPRENQKISFRAHIQAARQTGLPLIVHARDADADTIEILRFEAGRGAFP
GVIHCFTAGPELARAALDLGLYISLSGIATFKSARDLRETAKMIPADRLL
IETDAPFLAPMPHRGKRCEPAFVADTARYLAEFFGETQEDFAARTTDNFF
NLFTKADRAHART*
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mRNA from alignment at P-wetherbeei_contig7579:1770..2561-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7579.2.1 ID=mRNA_P-wetherbeei_contig7579.2.1|Name=mRNA_P-wetherbeei_contig7579.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=792bp|location=Sequence derived from alignment at P-wetherbeei_contig7579:1770..2561- (Phaeothamnion wetherbeei SAG_119_79)
ATGCTGGTCGACAGCCATTGCCATCTGGATTTCCCGGAATTCGCCAGCGA AATGGATCTGGTGGTACGCCGGGCGGGGCAGGCAGGGGTTGGCATGATGC TAACCATCTGTACACGGATCAGCGCCTTTGACAGCATTCTTGCCGTCGCA AACCGCTATGATCATATTTATTGTTCGGTTGGCATTCACCCGCATGAGGC GGGCACGGAGCCGGCCATGGATTGCGCCCGTATTGCCGCATTGACGGCGC ATGACAAGGTGATTGGCATTGGCGAAACCGGGCTGGATTATTTTTATGAA CATAGTCCGCGCGAAAATCAGAAAATATCTTTTCGCGCCCATATTCAGGC GGCGCGCCAGACCGGCCTGCCATTGATCGTGCATGCCCGCGACGCCGACG CCGACACCATAGAAATTTTGCGCTTTGAGGCGGGCAGGGGCGCTTTCCCG GGGGTCATTCACTGTTTTACGGCGGGGCCGGAATTGGCGCGGGCGGCGCT GGATCTGGGGCTTTATATTTCGCTGTCGGGCATTGCGACCTTCAAAAGCG CCAGGGATTTACGCGAAACCGCAAAAATGATTCCGGCGGATCGTTTATTG ATTGAAACCGACGCACCGTTTCTTGCGCCCATGCCGCACCGGGGCAAGCG CTGTGAGCCGGCATTTGTCGCCGACACGGCGCGCTATCTGGCGGAATTTT TTGGCGAGACGCAGGAAGATTTTGCCGCCCGCACAACGGATAATTTTTTC AACCTGTTCACCAAAGCGGATCGCGCCCATGCCCGCACATAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig7579:1770..2561-

>mRNA_P-wetherbeei_contig7579.2.1 ID=mRNA_P-wetherbeei_contig7579.2.1|Name=mRNA_P-wetherbeei_contig7579.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=792bp|location=Sequence derived from alignment at P-wetherbeei_contig7579:1770..2561- (Phaeothamnion wetherbeei SAG_119_79)
ATGCTGGTCGACAGCCATTGCCATCTGGATTTCCCGGAATTCGCCAGCGA
AATGGATCTGGTGGTACGCCGGGCGGGGCAGGCAGGGGTTGGCATGATGC
TAACCATCTGTACACGGATCAGCGCCTTTGACAGCATTCTTGCCGTCGCA
AACCGCTATGATCATATTTATTGTTCGGTTGGCATTCACCCGCATGAGGC
GGGCACGGAGCCGGCCATGGATTGCGCCCGTATTGCCGCATTGACGGCGC
ATGACAAGGTGATTGGCATTGGCGAAACCGGGCTGGATTATTTTTATGAA
CATAGTCCGCGCGAAAATCAGAAAATATCTTTTCGCGCCCATATTCAGGC
GGCGCGCCAGACCGGCCTGCCATTGATCGTGCATGCCCGCGACGCCGACG
CCGACACCATAGAAATTTTGCGCTTTGAGGCGGGCAGGGGCGCTTTCCCG
GGGGTCATTCACTGTTTTACGGCGGGGCCGGAATTGGCGCGGGCGGCGCT
GGATCTGGGGCTTTATATTTCGCTGTCGGGCATTGCGACCTTCAAAAGCG
CCAGGGATTTACGCGAAACCGCAAAAATGATTCCGGCGGATCGTTTATTG
ATTGAAACCGACGCACCGTTTCTTGCGCCCATGCCGCACCGGGGCAAGCG
CTGTGAGCCGGCATTTGTCGCCGACACGGCGCGCTATCTGGCGGAATTTT
TTGGCGAGACGCAGGAAGATTTTGCCGCCCGCACAACGGATAATTTTTTC
AACCTGTTCACCAAAGCGGATCGCGCCCATGCCCGCACATAA
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