mRNA_P-wetherbeei_contig754.3.3 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig754.3.3
Unique NamemRNA_P-wetherbeei_contig754.3.3
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig754.3.3 vs. uniprot
Match: A0A836C854_9STRA (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C854_9STRA)

HSP 1 Score: 444 bits (1143), Expect = 1.110e-152
Identity = 203/245 (82.86%), Postives = 221/245 (90.20%), Query Frame = 1 
Query:  145 RAMSAAVADSPNIKYFKVYRWDPEQKQKPYISTYPIDLNSCGPMVLDALFKIKNEQDPTLTFRRSCREGICGSCAMNIDGKNTLACLCYIEKESAEPTKIYPLPHMYVVKDLVPDMGNFYDQYKSIEPWLKTTKPPPGGKEYLQSIEDRKKLDGMYECILCACCSTACPSYWWNADKYLGPAVLMQAFRWIEDSRDDFAEERLKSLDDAFKLYRCHTIMNCSKTCPKHLNPGKAIAHIKKRMLAL 879
            R +S   AD  NIKYFKVYRWDPEQKQKPY+STYP+DL+ CGPMVLDAL KIKNEQDPTLTFRRSCREGICGSCAMNIDG+NTLACLCYI++ S+   K+ PLPHMYVVKDLVPDM NFYDQYKSIEPWLKT  P    KE+LQS+EDRKKLDGMYECI+CACCSTACPSYWWN DKYLGPAVLMQA+RWIEDSRD++  ERL+ LDDAFKLYRCHTIMNCS+TCPKHLNPGKAIAHIKKRM+AL
Sbjct:   22 RTLSTKAAD--NIKYFKVYRWDPEQKQKPYVSTYPVDLSECGPMVLDALLKIKNEQDPTLTFRRSCREGICGSCAMNIDGRNTLACLCYIDRNSSS-IKVNPLPHMYVVKDLVPDMTNFYDQYKSIEPWLKTKTPKKDDKEHLQSVEDRKKLDGMYECIMCACCSTACPSYWWNGDKYLGPAVLMQAYRWIEDSRDEYTRERLEQLDDAFKLYRCHTIMNCSQTCPKHLNPGKAIAHIKKRMMAL 263
[Close]
BLAST of mRNA_P-wetherbeei_contig754.3.3 vs. uniprot
Match: A0A835Z536_9STRA (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z536_9STRA)

HSP 1 Score: 439 bits (1129), Expect = 1.590e-150
Identity = 210/277 (75.81%), Postives = 231/277 (83.39%), Query Frame = 1 
Query:   52 ALVISSKMTVVPLAARTAA-SRGVRRMAPTCARAMSAAVADSPNIKYFKVYRWDPEQKQKPYISTYPIDLNSCGPMVLDALFKIKNEQDPTLTFRRSCREGICGSCAMNIDGKNTLACLCYIEKESAEPTKIYPLPHMYVVKDLVPDMGNFYDQYKSIEPWLKTTKPPPGGKEYLQSIEDRKKLDGMYECILCACCSTACPSYWWNADKYLGPAVLMQAFRWIEDSRDDFAEERLKSLDDAFKLYRCHTIMNCSKTCPKHLNPGKAIAHIKKRMLAL 879
            A V++     VP AAR A  S  VR +A T             NI+YFKVYRWDPEQ+QKPY+STYP+DL+ CGPMVLDAL KIKNEQDPTLTFRRSCREGICGSCAMNI+G+NTLACL YI+K S+  TK+ PLPHMYVVKDLVPDM NFYDQYKSIEPWLKT  P    KE+LQSI DRKKLDGMYECILCACCST+CPSYWWN DKYLGPAVLMQA+RWIEDSRD+F  ERL+ LDDAFKLYRCHTIMNCS+TCPKHLNPGKAIAHIKKRM+A+
Sbjct:    2 AHVLARAAGAVPAAARRAVGSTAVRGLATT------------NNIQYFKVYRWDPEQRQKPYVSTYPVDLDECGPMVLDALLKIKNEQDPTLTFRRSCREGICGSCAMNINGRNTLACLAYIDKSSSS-TKVNPLPHMYVVKDLVPDMTNFYDQYKSIEPWLKTKTPKKDDKEHLQSIADRKKLDGMYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWIEDSRDEFTRERLEQLDDAFKLYRCHTIMNCSQTCPKHLNPGKAIAHIKKRMMAI 265
[Close]
BLAST of mRNA_P-wetherbeei_contig754.3.3 vs. uniprot
Match: A0A7S2LAL1_9STRA (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LAL1_9STRA)

HSP 1 Score: 437 bits (1124), Expect = 1.510e-149
Identity = 201/266 (75.56%), Postives = 226/266 (84.96%), Query Frame = 1 
Query:   76 TVVPLAARTAASRGVRRMAPTCARAMSAAVADSPNIKYFKVYRWDPEQKQKPYISTYPIDLNSCGPMVLDALFKIKNEQDPTLTFRRSCREGICGSCAMNIDGKNTLACLCYIEKESAEPTKIYPLPHMYVVKDLVPDMGNFYDQYKSIEPWLKTTKPP-PGGKEYLQSIEDRKKLDGMYECILCACCSTACPSYWWNADKYLGPAVLMQAFRWIEDSRDDFAEERLKSLDDAFKLYRCHTIMNCSKTCPKHLNPGKAIAHIKKRM 870
            TV  + AR A S G R ++    +      A   NIKYFK+YRWDPEQKQKPYIST+P+DLN CGPMVLDAL KIKNEQDPTLTFRRSCREGICGSCAMNIDG NTLACLCYI  ES+  TKIYPLPHMYV+KDLVPDM NFY+QY+SIEPWL+T +   PG KE+LQ+ EDR KLDGMYECILCACCST+CPSYWWNADKYLGPAVLMQA+RWIEDSRDD+ ++RL  LDDAFKLYRCHTIMNC+K CPK+LNPGKAIA+IKK++
Sbjct:    8 TVPSIIARLARSNGARTLSGESLKVEEVPQAKKENIKYFKIYRWDPEQKQKPYISTFPVDLNDCGPMVLDALIKIKNEQDPTLTFRRSCREGICGSCAMNIDGSNTLACLCYINNESSSATKIYPLPHMYVIKDLVPDMSNFYEQYRSIEPWLQTVQSKEPGQKEWLQTKEDRAKLDGMYECILCACCSTSCPSYWWNADKYLGPAVLMQAYRWIEDSRDDYGKKRLAELDDAFKLYRCHTIMNCTKVCPKNLNPGKAIANIKKKL 273
[Close]
BLAST of mRNA_P-wetherbeei_contig754.3.3 vs. uniprot
Match: A0A7S0PK69_9STRA (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial n=2 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0PK69_9STRA)

HSP 1 Score: 434 bits (1116), Expect = 1.780e-148
Identity = 196/232 (84.48%), Postives = 216/232 (93.10%), Query Frame = 1 
Query:  178 NIKYFKVYRWDPEQKQKPYISTYPIDLNSCGPMVLDALFKIKNEQDPTLTFRRSCREGICGSCAMNIDGKNTLACLCYIEKESAEPTKIYPLPHMYVVKDLVPDMGNFYDQYKSIEPWLKTTKPPPGG-KEYLQSIEDRKKLDGMYECILCACCSTACPSYWWNADKYLGPAVLMQAFRWIEDSRDDFAEERLKSLDDAFKLYRCHTIMNCSKTCPKHLNPGKAIAHIKKRM 870
            NIKYFK+YRWDPEQKQKPYISTYP+DLN+CGPMVLDAL KIKNEQDPTLTFRRSCREGICGSCAMNIDG NTLACLCYI+ +SA  TKIYPLPHMYVVKDLVPDM NFY+QY+SIEPWL+TTK    G KE+LQ+ E+R KLDGMYECILCACCST+CPSYWWNADKYLGPAVLMQA+RWIEDSRD+F +ERL+ LDDAFKLYRCHTIMNC+K CPKHLNPGKAIA+IKK++
Sbjct:   35 NIKYFKIYRWDPEQKQKPYISTYPVDLNNCGPMVLDALIKIKNEQDPTLTFRRSCREGICGSCAMNIDGTNTLACLCYIDDKSAAATKIYPLPHMYVVKDLVPDMSNFYEQYRSIEPWLQTTKEKEEGQKEWLQTRENRAKLDGMYECILCACCSTSCPSYWWNADKYLGPAVLMQAYRWIEDSRDEFTKERLEELDDAFKLYRCHTIMNCTKVCPKHLNPGKAIANIKKKL 266
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BLAST of mRNA_P-wetherbeei_contig754.3.3 vs. uniprot
Match: A0A7R9W5S4_9STRA (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W5S4_9STRA)

HSP 1 Score: 431 bits (1107), Expect = 2.500e-147
Identity = 199/248 (80.24%), Postives = 216/248 (87.10%), Query Frame = 1 
Query:  145 RAMSAAVADSPNIKYFKVYRWDPEQKQKPYISTYPIDLNSCGPMVLDALFKIKNEQDPTLTFRRSCREGICGSCAMNIDGKNTLACLCYIEKE-----SAEPTKIYPLPHMYVVKDLVPDMGNFYDQYKSIEPWLKTTK-PPPGGKEYLQSIEDRKKLDGMYECILCACCSTACPSYWWNADKYLGPAVLMQAFRWIEDSRDDFAEERLKSLDDAFKLYRCHTIMNCSKTCPKHLNPGKAIAHIKKRM 870
            R MS A      IKYFK+YRWDP+Q+QKPY+STYP+DLN CGPMVLDAL KIKNEQDPTLTFRRSCREGICGSCAMNIDG NTLACLCYIE +     S + TKIYPLPHMYVVKDLVPDMGNFY+QY+SIEPWLK  K   PG  EYLQS EDR KLDGMYECILCACCST+CPSYWWNADKYLGPAVLMQA+RWIEDSRDDF +ERL+ LDDAFKLYRCHTIMNC+K CPKHLNPGKAI +IKK++
Sbjct:    9 RPMSTAEKAEERIKYFKIYRWDPDQRQKPYLSTYPVDLNDCGPMVLDALIKIKNEQDPTLTFRRSCREGICGSCAMNIDGTNTLACLCYIEPKGSGDTSGKATKIYPLPHMYVVKDLVPDMGNFYEQYRSIEPWLKKKKGKEPGQAEYLQSREDRAKLDGMYECILCACCSTSCPSYWWNADKYLGPAVLMQAYRWIEDSRDDFTKERLEDLDDAFKLYRCHTIMNCTKVCPKHLNPGKAIGNIKKKL 256
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BLAST of mRNA_P-wetherbeei_contig754.3.3 vs. uniprot
Match: W7U0Z2_9STRA (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U0Z2_9STRA)

HSP 1 Score: 425 bits (1093), Expect = 8.120e-145
Identity = 197/237 (83.12%), Postives = 214/237 (90.30%), Query Frame = 1 
Query:  178 NIKYFKVYRWDPEQKQKPYISTYPIDLNSCGPMVLDALFKIKNEQDPTLTFRRSCREGICGSCAMNIDGKNTLACLCYIEKESAEPTKIYPLPHMYVVKDLVPDMGNFYDQYKSIEPWLKT----TKPPPGGKEYLQSIEDRKKLDGMYECILCACCSTACPSYWWNADKYLGPAVLMQAFRWIEDSRDDFAEERLKSLDDAFKLYRCHTIMNCSKTCPKHLNPGKAIAHIKKRMLA 876
            NIK+FKVYRWDPEQ QKPY+STYP+DL+ CGPMVLDALFKIKNEQDPTLTFRRSCREGICGSCAMNIDG NTLACL YI K   EPTKIYPLPHMYV+KDLVPDM NFYDQYKSIEPWL+T     K P   KE+LQS EDRKKLDGMYECILCACCSTACPSYWW ADKYLGPAVLMQA+RWIEDSRD++ +ERL++LDD+FKLYRCHTIMNC+K CPKHLNPG+AIAHIKKR+ A
Sbjct:   47 NIKFFKVYRWDPEQNQKPYLSTYPVDLDDCGPMVLDALFKIKNEQDPTLTFRRSCREGICGSCAMNIDGTNTLACLSYINK-GPEPTKIYPLPHMYVLKDLVPDMTNFYDQYKSIEPWLQTKAVEAKDP--NKEHLQSKEDRKKLDGMYECILCACCSTACPSYWWAADKYLGPAVLMQAYRWIEDSRDEYTKERLEALDDSFKLYRCHTIMNCTKVCPKHLNPGRAIAHIKKRLAA 280
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BLAST of mRNA_P-wetherbeei_contig754.3.3 vs. uniprot
Match: A0A7S1B7X7_9STRA (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B7X7_9STRA)

HSP 1 Score: 424 bits (1090), Expect = 2.150e-144
Identity = 194/237 (81.86%), Postives = 211/237 (89.03%), Query Frame = 1 
Query:  178 NIKYFKVYRWDPEQKQKPYISTYPIDLNSCGPMVLDALFKIKNEQDPTLTFRRSCREGICGSCAMNIDGKNTLACLCYIEK-ESAEPTKIYPLPHMYVVKDLVPDMGNFYDQYKSIEPWLKTT-KPPPGGKEYLQSIEDRKKLDGMYECILCACCSTACPSYWWNADKYLGPAVLMQAFRWIEDSRDDFAEERLKSLDDAFKLYRCHTIMNCSKTCPKHLNPGKAIAHIKKRMLALA 882
            NIKYFKVYRWDPEQKQKPY++TYP+DL+ CGPM+LDAL KIK+EQDP+LTFRRSCREGICGSCAMNIDGKNTLACLCYI+K  S + TKIYPLPHMYVVKDLVPD+ NFY+QY+SIEPWL+T  K   G KE+LQS  DR KLDGMYECILCACCSTACPSYWWNAD YLGPAVLMQA+RWIEDSRD   EERL  LDDAFKLYRCHTIMNCSK CPKHLNPGKAIAHIKK++   A
Sbjct:   43 NIKYFKVYRWDPEQKQKPYVATYPVDLDDCGPMMLDALIKIKSEQDPSLTFRRSCREGICGSCAMNIDGKNTLACLCYIDKTNSGKATKIYPLPHMYVVKDLVPDLSNFYEQYRSIEPWLQTKDKKVDGQKEWLQSKSDRAKLDGMYECILCACCSTACPSYWWNADSYLGPAVLMQAYRWIEDSRDQMTEERLAQLDDAFKLYRCHTIMNCSKVCPKHLNPGKAIAHIKKKLATSA 279
[Close]
BLAST of mRNA_P-wetherbeei_contig754.3.3 vs. uniprot
Match: D7FWF5_ECTSI (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWF5_ECTSI)

HSP 1 Score: 420 bits (1079), Expect = 1.000e-142
Identity = 194/241 (80.50%), Postives = 217/241 (90.04%), Query Frame = 1 
Query:  160 AVADSPNIKYFKVYRWDPEQK-QKPYISTYPIDLNSCGPMVLDALFKIKNEQDPTLTFRRSCREGICGSCAMNIDGKNTLACLCYIEKESAEPTKIYPLPHMYVVKDLVPDMGNFYDQYKSIEPWLKTTKPPPGGKEYLQSIEDRKKLDGMYECILCACCSTACPSYWWNADKYLGPAVLMQAFRWIEDSRDDFAEERLKSLDDAFKLYRCHTIMNCSKTCPKHLNPGKAIAHIKKRMLAL 879
            A A S ++K FK+YRWDP +K QKPY+ TYPID + CGPMVLDAL KIKNEQDPTLTFRRSCREGICGSCAMNI+GKNTLACLC IE++SA P KIYPLPHM+V KDLVPDM NFY+QYKSIEPWLKT K      E+LQSI+DRKKLDGMYECILCACCST+CPSYWWNADKYLGPAVLMQA+RWI+DSRDD+ +ERL+SLDDAFKL+RCHTIMNC+KTCPKHLNPGKAIA+IKKR+ AL
Sbjct:   41 AAASSESVKTFKIYRWDPNEKDQKPYMKTYPIDRDDCGPMVLDALIKIKNEQDPTLTFRRSCREGICGSCAMNINGKNTLACLCAIEEDSA-PMKIYPLPHMFVQKDLVPDMTNFYEQYKSIEPWLKTKKDKDPDVEHLQSIQDRKKLDGMYECILCACCSTSCPSYWWNADKYLGPAVLMQAYRWIDDSRDDYTKERLESLDDAFKLFRCHTIMNCTKTCPKHLNPGKAIANIKKRVHAL 280
[Close]
BLAST of mRNA_P-wetherbeei_contig754.3.3 vs. uniprot
Match: B7GA40_PHATC (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GA40_PHATC)

HSP 1 Score: 419 bits (1078), Expect = 1.110e-142
Identity = 197/260 (75.77%), Postives = 219/260 (84.23%), Query Frame = 1 
Query:   97 RTAASRGVRRMAPTCARAMSAAVADSPNIKYFKVYRWDPEQKQKPYISTYPIDLNSCGPMVLDALFKIKNEQDPTLTFRRSCREGICGSCAMNIDGKNTLACLCYIE-KESAEPTKIYPLPHMYVVKDLVPDMGNFYDQYKSIEPWLKTTK-PPPGGKEYLQSIEDRKKLDGMYECILCACCSTACPSYWWNADKYLGPAVLMQAFRWIEDSRDDFAEERLKSLDDAFKLYRCHTIMNCSKTCPKHLNPGKAIAHIKKRM 870
            +T  SR   R   T     +A    +P IKYFKVYRWDPEQ QKPY+STYP+DL +CGPMVLDAL KIKNEQDPTLTFRRSCREGICGSCAMNIDG NTLACL YI+ K+++  TKIYPLPHMYV+KDLVPDMGNFY+QY+SIEPWL+  K   PG  EYLQ+ EDR KLDGMYECILCACCSTACPSYWWNADKYLGPAVL+QA+RWIEDSRD   ++RL+ LDDAFKLYRCHTIMNC+K CPKHLNPGKAIA IKKR+
Sbjct:   11 KTLFSRFAARSFATADLKANAIPKQAPRIKYFKVYRWDPEQSQKPYLSTYPVDLANCGPMVLDALIKIKNEQDPTLTFRRSCREGICGSCAMNIDGVNTLACLSYIDQKDTSSATKIYPLPHMYVIKDLVPDMGNFYEQYRSIEPWLQPEKGKEPGQAEYLQTREDRAKLDGMYECILCACCSTACPSYWWNADKYLGPAVLLQAYRWIEDSRDGSTKKRLEELDDAFKLYRCHTIMNCTKVCPKHLNPGKAIAQIKKRL 270
[Close]
BLAST of mRNA_P-wetherbeei_contig754.3.3 vs. uniprot
Match: A0A1Z5JXN9_FISSO (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JXN9_FISSO)

HSP 1 Score: 419 bits (1077), Expect = 1.460e-142
Identity = 191/234 (81.62%), Postives = 208/234 (88.89%), Query Frame = 1 
Query:  172 SPNIKYFKVYRWDPEQKQKPYISTYPIDLNSCGPMVLDALFKIKNEQDPTLTFRRSCREGICGSCAMNIDGKNTLACLCYIEKESAEPTKIYPLPHMYVVKDLVPDMGNFYDQYKSIEPWLKT-TKPPPGGKEYLQSIEDRKKLDGMYECILCACCSTACPSYWWNADKYLGPAVLMQAFRWIEDSRDDFAEERLKSLDDAFKLYRCHTIMNCSKTCPKHLNPGKAIAHIKKRM 870
            S NIKYFKVYRWDPEQ QKPY+STYP+DLN CGPMVLDAL KIKNEQDP+LTFRRSCREGICGSCAMNIDG N LACL YIEK++++ TKIYPLPHMYV+KDLVPDM NFY+QY+SIEPWL+   +  PG  EYLQS +DR KLDGMYECILCACCSTACPSYWWNADKYLGPAVLMQA+RWIEDSRD    +RL  LDDAFKLYRCHTIMNC+K CPKHLNPGKAIA IKKR+
Sbjct:   35 SENIKYFKVYRWDPEQSQKPYLSTYPVDLNECGPMVLDALIKIKNEQDPSLTFRRSCREGICGSCAMNIDGVNNLACLSYIEKDTSKATKIYPLPHMYVIKDLVPDMSNFYEQYRSIEPWLQPGQEKKPGQGEYLQSEQDRAKLDGMYECILCACCSTACPSYWWNADKYLGPAVLMQAYRWIEDSRDGSTAKRLADLDDAFKLYRCHTIMNCTKVCPKHLNPGKAIASIKKRL 268
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig754.3.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836C854_9STRA1.110e-15282.86Succinate dehydrogenase [ubiquinone] iron-sulfur s... [more]
A0A835Z536_9STRA1.590e-15075.81Succinate dehydrogenase [ubiquinone] iron-sulfur s... [more]
A0A7S2LAL1_9STRA1.510e-14975.56Succinate dehydrogenase [ubiquinone] iron-sulfur s... [more]
A0A7S0PK69_9STRA1.780e-14884.48Succinate dehydrogenase [ubiquinone] iron-sulfur s... [more]
A0A7R9W5S4_9STRA2.500e-14780.24Succinate dehydrogenase [ubiquinone] iron-sulfur s... [more]
W7U0Z2_9STRA8.120e-14583.12Succinate dehydrogenase [ubiquinone] iron-sulfur s... [more]
A0A7S1B7X7_9STRA2.150e-14481.86Succinate dehydrogenase [ubiquinone] iron-sulfur s... [more]
D7FWF5_ECTSI1.000e-14280.50Succinate dehydrogenase [ubiquinone] iron-sulfur s... [more]
B7GA40_PHATC1.110e-14275.77Succinate dehydrogenase [ubiquinone] iron-sulfur s... [more]
A0A1Z5JXN9_FISSO1.460e-14281.62Succinate dehydrogenase [ubiquinone] iron-sulfur s... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig754contigP-wetherbeei_contig754:3618..6817 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FWF5
Preferred nameSDHB
PFAMsFer2_3,Fer4_17
Model size1497
Max annot lvl2759|Eukaryota
KEGG rclassRC00045
KEGG koko:K00235
KEGG ReactionR02164
KEGG Pathwayko00020,ko00190,ko01100,ko01110,ko01120,ko01130,ko01200,ko04714,ko04932,ko05010,ko05012,ko05016,map00020,map00190,map01100,map01110,map01120,map01130,map01200,map04714,map04932,map05010,map05012,map05016
KEGG ModuleM00009,M00011,M00148
Hectar predicted targeting categorymitochondrion
GOsGO:0000104,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005746,GO:0005749,GO:0005886,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006105,GO:0006119,GO:0006121,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008177,GO:0009055,GO:0009060,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016020,GO:0016310,GO:0016491,GO:0016627,GO:0016635,GO:0016999,GO:0017144,GO:0019637,GO:0019693,GO:0019752,GO:0019866,GO:0022900,GO:0022904,GO:0031090,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032991,GO:0034641,GO:0042773,GO:0042775,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0045257,GO:0045273,GO:0045281,GO:0045283,GO:0045333,GO:0046034,GO:0046483,GO:0048037,GO:0048038,GO:0048039,GO:0051536,GO:0051537,GO:0051538,GO:0051539,GO:0051540,GO:0055086,GO:0055114,GO:0070013,GO:0070469,GO:0071704,GO:0071944,GO:0072350,GO:0072521,GO:0098796,GO:0098798,GO:0098800,GO:0098803,GO:1901135,GO:1901360,GO:1901564,GO:1902494,GO:1990204
Exons7
Evalue2.07e-146
EggNOG OGsCOG0479@1|root,KOG3049@2759|Eukaryota
EC1.3.5.1
Description3 iron, 4 sulfur cluster binding
Cds size813
COG categoryC
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig754.3.3prot_P-wetherbeei_contig754.3.3Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig754 4230..6745 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186987.1903164-UTR-P-wetherbeei_contig754:3617..42291683186987.1903164-UTR-P-wetherbeei_contig754:3617..4229Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig754 3618..4229 -
1683186987.2867556-UTR-P-wetherbeei_contig754:6745..68171683186987.2867556-UTR-P-wetherbeei_contig754:6745..6817Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig754 6746..6817 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186987.2051308-CDS-P-wetherbeei_contig754:4229..44121683186987.2051308-CDS-P-wetherbeei_contig754:4229..4412Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig754 4230..4412 -
1683186987.2163112-CDS-P-wetherbeei_contig754:4736..48411683186987.2163112-CDS-P-wetherbeei_contig754:4736..4841Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig754 4737..4841 -
1683186987.2279696-CDS-P-wetherbeei_contig754:5085..52211683186987.2279696-CDS-P-wetherbeei_contig754:5085..5221Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig754 5086..5221 -
1683186987.2389448-CDS-P-wetherbeei_contig754:5499..55401683186987.2389448-CDS-P-wetherbeei_contig754:5499..5540Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig754 5500..5540 -
1683186987.2497563-CDS-P-wetherbeei_contig754:5805..59131683186987.2497563-CDS-P-wetherbeei_contig754:5805..5913Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig754 5806..5913 -
1683186987.266196-CDS-P-wetherbeei_contig754:6194..63111683186987.266196-CDS-P-wetherbeei_contig754:6194..6311Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig754 6195..6311 -
1683186987.2773788-CDS-P-wetherbeei_contig754:6622..67451683186987.2773788-CDS-P-wetherbeei_contig754:6622..6745Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig754 6623..6745 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig754.3.3

>prot_P-wetherbeei_contig754.3.3 ID=prot_P-wetherbeei_contig754.3.3|Name=mRNA_P-wetherbeei_contig754.3.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=271bp
MTVVPLAARTAASRGVRRMAPTCARAMSAAVADSPNIKYFKVYRWDPEQK
QKPYISTYPIDLNSCGPMVLDALFKIKNEQDPTLTFRRSCREGICGSCAM
NIDGKNTLACLCYIEKESAEPTKIYPLPHMYVVKDLVPDMGNFYDQYKSI
EPWLKTTKPPPGGKEYLQSIEDRKKLDGMYECILCACCSTACPSYWWNAD
KYLGPAVLMQAFRWIEDSRDDFAEERLKSLDDAFKLYRCHTIMNCSKTCP
KHLNPGKAIAHIKKRMLALA*
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mRNA from alignment at P-wetherbeei_contig754:3618..6817-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig754.3.3 ID=mRNA_P-wetherbeei_contig754.3.3|Name=mRNA_P-wetherbeei_contig754.3.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3200bp|location=Sequence derived from alignment at P-wetherbeei_contig754:3618..6817- (Phaeothamnion wetherbeei SAG_119_79)
AAAGGGAAGTGTTGTCTAAGAGTCTCGTGGCTACAAGTGTACAATCTCTG
TGCCTTGGTCATCTCCTCTAAGATGACTGTCGTCCCATTAGCGGCACGGA
CGGCTGCCAGCCGCGGCGTACGGCGCATGGCACCAACCTGCGCGCGTGCG
ATGTCAGCTGCTGTGGCTGATTCGCCCAACATCAAGTATTTCAAGGTGAT
CTGGATTGAGGTTTAGAGGATTGGCAATGAACATCGGAATATCCGTTCTT
CTTTTTCTGGCCCGTTCTATAAGCCTCTGACAAAGAGCCTTGCATGCTGG
TATTGAGGGCGGCAAACGCAATTGGTACCTTTCTTATGGACTGCAACTCC
TCCCTCCAAGTGGAGGCTGTCCAGCCTACAGATATGTCGGTGGCGAGAAC
GGCTACATACTGAGATCGCCATTGTACCTCTCTCGTGCGCACCCTCGCAA
CGGCCTGGAGTTTCCTCATTTCTCTGTATATTCTCTTGGTCAATGTATTG
CGCCAGGTATACCGATGGGACCCTGAGCAAAAGCAAAAGCCATACATCAG
CACGTATCCCATCGATCTCAACAGCTGCGGGCCGATGGTGCTCGACGCGC
TCTTTAAGATCAAGAACGAGCAGGTATGCTGCTGAGAGTTTTGTGTGGGT
TTTCCGTCTGAAAGTCATGTGCGAGAAGTACGTTGCGACAGGGAAGTAGC
TCATCACCCGCCCGCCTGCTGCTCCTTGTCCATATGAAGGGGAGGCAGCT
CATGACAAAAACTTTTTAACAGAGGCGACACAGAGCAGCCGTTAACGTTC
CGGCAGTAGCTCCCAGTCTCGGGGGATCGAAAGAAGAATTTCGTTGTTTA
CCAGCCGCTTTCGTCGCTGCTTCGCTTGTTTCGTCTCTGCCGTGCACAAA
TCAGGACCCGACGCTGACCTTCCGGCGGTCGTGCCGCGAGGGCATCTGCG
GCAGCTGCGCCATGAACATTGACGGCAAAAACACGCTCGCCTGCCTCTGC
TACATCGAAAAGGTAAGTTGCCTTTCTGAACTTTCCTGCACGTTGCCAAG
TCGTGTGTATAAAAAGCACTTTCGGGTGGCTGATGCCCCTTTTACCAGTA
AGGAGGAGGCGCGAAAAAGGCAACGCTTTTTCCTCTTCTGAGCGTTATGA
GATGCTTGTAGAAGGATTTAGTTGTAAATTGCTTGTAGAAGGATTTATTT
TAAACGTGGAGTGTCCTTTGGTTTGTCGACTTCACCACGTTCGTCCCTTT
CGTTTCTTTTATGTGGTGCTTCTGCAGGAGTCGGCAGAGCCCACAAAGAT
CTACCCTCTGCCGCACATGTAAGCCAACCAATCCAGCCTCTGACACCTTT
TGCTCTTCTTTCGTGTAAAGCTCTAAGAGAAATGTCATTCTTTTTTCCTT
AGAAATGTCGTTGTAGGCAATTAATTGACCAGCCGCGCTACGAGAAAGTC
GTCAATTTAATCGCCTTTTTTCTTGTTTGATGCTCTTGCTATCCATTTGA
CTTTTCTCCTGCTTGATTAATGCCACCTGGCAAACAAACAAATCATATGA
AAAACAAACTGGGGATCTGTAACAAAACAAAACTTGGATGAGTCAGGTAC
GTGGTGAAGGACCTGGTGCCGGACATGGGCAACTTCTACGACCAGTACAA
GAGCATCGAGCCGTGGCTCAAGACCACCAAACCCCCACCCGGCGGCAAGG
AGTACCTCCAGTCAATCGAGGACCGCAAGAAGGTGATGGTTGCGGGTTCA
ACTGTTTTCCTGCCTGCTGTATTGTTAACTGTCTGTTACAAGAGATCTAT
GCCGTTTCCGGACTGCTGACTGTTGCTCACCTCCTTTTACCTGGTTCAGT
CTCTTATTTGCGTGTAGTGTGTCATGCATAATGTTGCCACGCATTTGGCC
CACCTGCCTGATGTGCCGAGAACATTGTCTGAATCCGATTTCCCCCCTCC
ATATCATATCATTTCTGTTTCTTCAGCTGGACGGCATGTACGAGTGCATC
CTGTGCGCGTGCTGTTCGACAGCGTGCCCCTCCTACTGGTGGAATGCCGA
CAAATACCTCGGCCCCGCCGTCCTCATGCAGGTCAGTCAGTGATGTCGTT
TGGTCGCCTTTCTTCCTTTCTTTCTGTTTTCGCGTTCCTTTTCAACACCT
CTAGGAATCTTTTCCGAGGGGAAATACTTATATTTCGTAATTTCCTCTCA
TTTTCTTGTGGCTTCTCACATTGTGGCCTTTCAGCTGCAGAGGCTTCTGA
CCTACAAGCCACCTGAGAATCTGCTGTCCCTAAATTCCGCGGCGGTCCGA
ACCATGCCTGCCCGACCGTCCGTTTCATCCGACTTTCTGTCCCGATTCAT
CTGTCCGTGTCCTTCTCTTCCCTCTATGTCTCTCTGCATCTGCCTGCCTT
TGCAGGCGTTCCGGTGGATCGAAGACTCGCGGGATGACTTCGCGGAGGAG
CGGCTCAAGAGCCTCGACGACGCTTTCAAGCTGTACCGCTGCCACACCAT
CATGAACTGCTCCAAGACGTGCCCCAAGCACCTCAACCCGGGCAAGGCCA
TCGCCCACATCAAGAAGCGCATGCTCGCCCTCGCCTAAAGGCCGCCGAGC
TCCGGGTCCAGGTAGTCTGGGGCGGGGCCAGTCGCGGCGGCGCCGCATTC
GACCCGACCGACTCTCTCGCCGGCCTAAAATGGCCGGCCGGAAAGAGAGA
GGGGCGGACCGGCTAGCGGAAGCTGACGGGCGCTTGCAGCGCGGAGCGAT
TCGACAGCGATGCAGCGGAGCGGGAGCAGCGGGAGCGGAATCGGACTGGA
GCCGGACGGAGCGGCTGTGCCGGAGAAGGCAACGGGACAGCAAACACGGC
GCGCAGGCGAGGAGGGAAGCAGGCCGGGCGGGAGACGCGCAGACGAGGAG
ACAAGCAGGCCATGCGGGAGGTTCGAGGCTGCTGACTCCGACCGCCGTCT
CCCGGCTCGACCGCAATCGGCCTGCCCGAGGGATGCCGTGATGCGTTGAG
GCGTGAGAAGGAAGGAGGCTGTTGGGAGGCCGATTTTGTACGGGGAAGGC
GGAGAGAAAGGCGTGCTGCCTGCCGAACCATGGTTGTTGGTCTTTCCAGA
CAGTTTTGGCGGCGGACTGAGTGTGGCGACGGCCGAGGTTCTTAGGGTTT
TTGAAACGAAATTCCAAAATAATTCTTTCCGCTCATTCGAGCCGGCAGCT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig754:3618..6817-

>mRNA_P-wetherbeei_contig754.3.3 ID=mRNA_P-wetherbeei_contig754.3.3|Name=mRNA_P-wetherbeei_contig754.3.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=813bp|location=Sequence derived from alignment at P-wetherbeei_contig754:3618..6817- (Phaeothamnion wetherbeei SAG_119_79)
ATGACTGTCGTCCCATTAGCGGCACGGACGGCTGCCAGCCGCGGCGTACG
GCGCATGGCACCAACCTGCGCGCGTGCGATGTCAGCTGCTGTGGCTGATT
CGCCCAACATCAAGTATTTCAAGGTATACCGATGGGACCCTGAGCAAAAG
CAAAAGCCATACATCAGCACGTATCCCATCGATCTCAACAGCTGCGGGCC
GATGGTGCTCGACGCGCTCTTTAAGATCAAGAACGAGCAGGACCCGACGC
TGACCTTCCGGCGGTCGTGCCGCGAGGGCATCTGCGGCAGCTGCGCCATG
AACATTGACGGCAAAAACACGCTCGCCTGCCTCTGCTACATCGAAAAGGA
GTCGGCAGAGCCCACAAAGATCTACCCTCTGCCGCACATGTACGTGGTGA
AGGACCTGGTGCCGGACATGGGCAACTTCTACGACCAGTACAAGAGCATC
GAGCCGTGGCTCAAGACCACCAAACCCCCACCCGGCGGCAAGGAGTACCT
CCAGTCAATCGAGGACCGCAAGAAGCTGGACGGCATGTACGAGTGCATCC
TGTGCGCGTGCTGTTCGACAGCGTGCCCCTCCTACTGGTGGAATGCCGAC
AAATACCTCGGCCCCGCCGTCCTCATGCAGGCGTTCCGGTGGATCGAAGA
CTCGCGGGATGACTTCGCGGAGGAGCGGCTCAAGAGCCTCGACGACGCTT
TCAAGCTGTACCGCTGCCACACCATCATGAACTGCTCCAAGACGTGCCCC
AAGCACCTCAACCCGGGCAAGGCCATCGCCCACATCAAGAAGCGCATGCT
CGCCCTCGCCTAA
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