mRNA_P-wetherbeei_contig7449.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7449.1.1 vs. uniprot
Match: A0A835YK05_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK05_9STRA) HSP 1 Score: 162 bits (411), Expect = 2.180e-39 Identity = 98/198 (49.49%), Postives = 123/198 (62.12%), Query Frame = 1
Query: 10 KRRSHILGEAVCTTSTTVRRVAALTPVGPVARDAAAAMAADVWQVVLSVKSAAGIPVPADTRSKDVLQRSLRACLFYQPPRDVDADAGGPPPQLQDHFLGNAFQTLAKQHPHKEEVWQFPESSREDGNHKFIVRTDFWDERDVHCRVSQERLFVLLELTCTIRTPRPAIDGADTGVRGPLKNFSAKQHSAAKGSDSDS 603
+RRS +LG V + A L +G + D D QVVLSVKSA GIPVP D+R KDVLQRS+R CLFYQPPR++ D P + +DHF GN ++TLAKQ ++EEVW FP SS D + KF+VR DF D D R +R+FVL+ELTCT+RT + A D VRGPL F A++ + A DSDS
Sbjct: 784 RRRSSLLGAGEHVLERRVTKSATLRALGDIDSD-------DTMQVVLSVKSATGIPVPDDSRVKDVLQRSVRVCLFYQPPRELQ-DTADAPWRPEDHFFGNTYKTLAKQDKNREEVWNFPTSSG-DADRKFLVRCDFDDPGDPRAR---DRVFVLIELTCTVRTGQAAPLEEDDSVRGPLTRFKAQKRTNAVTVDSDS 969
BLAST of mRNA_P-wetherbeei_contig7449.1.1 vs. uniprot
Match: D7FUN7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUN7_ECTSI) HSP 1 Score: 139 bits (349), Expect = 2.570e-31 Identity = 85/173 (49.13%), Postives = 104/173 (60.12%), Query Frame = 1
Query: 133 VWQVVLSVKSAAGIPVPADTRSKDVLQRSLRACLFYQPPRDVDADAGGPPPQLQDHFLGNAFQTLAKQHPHKEEVWQFPESSREDGNHKFIVRTDFWDE-----------RDV-----HCRVSQERLFVLLELTCTIRTPR----PA-IDGADTGVRGPLKNFSAKQHSAAKG 588
V QV LSVK A GIPV D++ D+ QR +RACLFY RDVD D G + +HFL N ++TLA QHP KEE W FP+SS +G KF+VRTDF RD H R ++RLF+L+ELTCT++T + PA +DG GVRGPLKNF A S A G
Sbjct: 1334 VMQVELSVKHAFGIPVARDSKMGDIRQRGMRACLFYDAGRDVDRDTGEASSEYNEHFLCNTYKTLAIQHPQKEEQWLFPDSS--EGERKFLVRTDFGSSSGNSSSSRQGTRDTNPSSAHSRGDRKRLFLLVELTCTVQTAKDEATPAKMDGG--GVRGPLKNFRAGSSSTAGG 1502
BLAST of mRNA_P-wetherbeei_contig7449.1.1 vs. uniprot
Match: A0A7S3XMQ6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XMQ6_HETAK) HSP 1 Score: 99.4 bits (246), Expect = 2.620e-18 Identity = 56/121 (46.28%), Postives = 73/121 (60.33%), Query Frame = 1
Query: 139 QVVLSVKSAAGIPVPADTRSKDVLQRSLRACLFYQPPRDVDADAGGPPPQLQDHFLGNAFQTLAKQHPHKEEVWQFPESSREDGNHKFIVRTDFWDERDVHCRVSQERLFVLLELTCTIRT 501
QV++S+K A GIP P D R D+ R LRA LFY PP+ G Q D F+GN + T A Q P+KEE W F ++ DG+HKF+VRTDF D ++ + E L+VLLE T +RT
Sbjct: 786 QVIISLKGARGIPTPHDRRLSDITYRCLRAVLFYDPPKQA-----GQIRQRSDFFIGNTYSTPAHQDPNKEECWTFTDN---DGDHKFLVRTDFVDLKNWNYL---EHLYVLLEFTIGLRT 895
BLAST of mRNA_P-wetherbeei_contig7449.1.1 vs. uniprot
Match: G4YYP5_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YYP5_PHYSP) HSP 1 Score: 64.7 bits (156), Expect = 2.330e-7 Identity = 33/93 (35.48%), Postives = 51/93 (54.84%), Query Frame = 1
Query: 139 QVVLSVKSAAGIPVPADTRSKDVLQRSLRACLFYQPPRDVDADAGGPPPQLQDHFLGNAFQTLAKQHPHKEEVWQFPESSREDGNHKFIVRTD 417
Q ++S+K AAG+P P DTR DV++R + CLF + D G P +GN + H +E+VW+F + S + +KF+VRT+
Sbjct: 350 QAIVSLKRAAGVPKPFDTREDDVVKRCVHVCLFQE---QQDVSKGKPKITGAGTVVGNVHEIPVYWHQGEEDVWEFSKKSTKQDKYKFLVRTN 439
BLAST of mRNA_P-wetherbeei_contig7449.1.1 vs. uniprot
Match: K3X241_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X241_GLOUD) HSP 1 Score: 63.2 bits (152), Expect = 7.980e-7 Identity = 36/103 (34.95%), Postives = 54/103 (52.43%), Query Frame = 1
Query: 136 WQ--VVLSVKSAAGIPVPADTRSKDVLQRSLRACLFYQ-------PPRDVDADAGGPPPQLQDHFLGNAFQTLAKQHPHKEEVWQFPESSREDGNHKFIVRTD 417
WQ V+S+K AAG+P P DTR +DVL+R + CLF + P R P +GN + HP +E+VW+F + + + +KF+VRT+
Sbjct: 714 WQSHAVVSLKRAAGVPKPFDTREEDVLKRCVHVCLFQEQEEMHPKPVRSRRKKEHKQPATGGGTVVGNVHEIPVFWHPGEEDVWEFSKKATKQNKYKFLVRTN 816
BLAST of mRNA_P-wetherbeei_contig7449.1.1 vs. uniprot
Match: D0N776_PHYIT (Uncharacterized protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0N776_PHYIT) HSP 1 Score: 62.0 bits (149), Expect = 1.640e-6 Identity = 34/93 (36.56%), Postives = 51/93 (54.84%), Query Frame = 1
Query: 139 QVVLSVKSAAGIPVPADTRSKDVLQRSLRACLFYQPPRDVDADAGGPPPQLQDHFLGNAFQTLAKQHPHKEEVWQFPESSREDGNHKFIVRTD 417
Q V+S+K AAG+P P DTR DV++R + CLF Q + A G +GN + H +E+VW+F + S + +KF+VRT+
Sbjct: 351 QAVVSLKRAAGVPKPFDTREDDVVKRCVHVCLF-QEQEESSATVSG-------FVVGNVHEIPVYWHQGEEDVWEFSKKSTKQDKYKFLVRTN 435
BLAST of mRNA_P-wetherbeei_contig7449.1.1 vs. uniprot
Match: A0A329S5F4_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329S5F4_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 1.900e-6 Identity = 34/103 (33.01%), Postives = 55/103 (53.40%), Query Frame = 1
Query: 139 QVVLSVKSAAGIPVPADTRSKDVLQRSLRACLFYQPPRDVDADAG----------GPPPQLQDHFLGNAFQTLAKQHPHKEEVWQFPESSREDGNHKFIVRTD 417
Q ++S+K AAG+P P DTR DV++R + CLF + +++ A AG G +GN + H +E+VW+F + S + +KF+VRT+
Sbjct: 711 QAIVSLKRAAGVPKPFDTREDDVVKRCVHVCLFQE--KEMSATAGRRRAAKAKAKGEKVMRAGTVVGNVHEIPVYWHQGEEDVWEFSKKSTKQDKYKFLVRTN 811
BLAST of mRNA_P-wetherbeei_contig7449.1.1 vs. uniprot
Match: A0A8J5MEK1_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5MEK1_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 3.090e-6 Identity = 34/103 (33.01%), Postives = 55/103 (53.40%), Query Frame = 1
Query: 139 QVVLSVKSAAGIPVPADTRSKDVLQRSLRACLFYQPPRDVDADAG----------GPPPQLQDHFLGNAFQTLAKQHPHKEEVWQFPESSREDGNHKFIVRTD 417
Q ++S+K AAG+P P DTR DV++R + CLF + +++ A AG G +GN + H +E+VW+F + S + +KF+VRT+
Sbjct: 467 QAIVSLKRAAGVPKPFDTREDDVVKRCVHVCLFQE--KEMSATAGRRRAAKAKAKGEKVMRAGTVVGNVHEIPVYWHQGEEDVWEFSKKSTKQDMYKFLVRTN 567
BLAST of mRNA_P-wetherbeei_contig7449.1.1 vs. uniprot
Match: A0A833TLU4_PHYIN (EF-hand domain pair n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833TLU4_PHYIN) HSP 1 Score: 61.2 bits (147), Expect = 3.310e-6 Identity = 39/123 (31.71%), Postives = 62/123 (50.41%), Query Frame = 1
Query: 139 QVVLSVKSAAGIPVPADTRSKDVLQRSLRACLFYQPP---------RDVDADAGGPPPQLQDHFLGNAFQTLAKQHPHKEEVWQFPESSREDGNHKFIVRTDFWDER-------DVHCRVSQE 459
Q V+S+K AAG+P P DTR DV++R + CLF + ++V AG + +GN + H +E+VW+F + S + +KF+VRT+ ++ VH R+S E
Sbjct: 701 QAVVSLKRAAGVPKPFDTREDDVVKRCVHVCLFQEQEESSATGRRKKEVKIKAGK---GVSGFVVGNVHEIPVYWHQGEEDVWEFSKKSTKQDKYKFLVRTNAVNDHLYLLVEFIVHLRLSPE 820
BLAST of mRNA_P-wetherbeei_contig7449.1.1 vs. uniprot
Match: A0A6A3EW67_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3EW67_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 3.500e-6 Identity = 37/109 (33.94%), Postives = 60/109 (55.05%), Query Frame = 1
Query: 139 QVVLSVKSAAGIPVPADTRSKDVLQRSLRACLFYQPPRDVDADAG--GPP------------PQL--QDHFLGNAFQTLAKQHPHKEEVWQFPESSREDGNHKFIVRTD 417
Q ++S+K AAG+P P DTR +DV++R + CLF Q +++ A G G P P+L + +GN + H +E+VW+F + S + +KF+VRT+
Sbjct: 1025 QAIVSLKRAAGVPKPFDTREEDVVKRCVHVCLF-QDQQEISASKGAAGRPRRARKAARNASNPKLTGEGTVIGNVHEIPVYWHQGEEDVWEFSKKSTKQDKYKFLVRTN 1132 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7449.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7449.1.1 >prot_P-wetherbeei_contig7449.1.1 ID=prot_P-wetherbeei_contig7449.1.1|Name=mRNA_P-wetherbeei_contig7449.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=257bp MAADVWQVVLSVKSAAGIPVPADTRSKDVLQRSLRACLFYQPPRDVDADAback to top mRNA from alignment at P-wetherbeei_contig7449:347..2980- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7449.1.1 ID=mRNA_P-wetherbeei_contig7449.1.1|Name=mRNA_P-wetherbeei_contig7449.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2634bp|location=Sequence derived from alignment at P-wetherbeei_contig7449:347..2980- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7449:347..2980- >mRNA_P-wetherbeei_contig7449.1.1 ID=mRNA_P-wetherbeei_contig7449.1.1|Name=mRNA_P-wetherbeei_contig7449.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=771bp|location=Sequence derived from alignment at P-wetherbeei_contig7449:347..2980- (Phaeothamnion wetherbeei SAG_119_79)back to top |