mRNA_P-wetherbeei_contig7427.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7427.3.1
Unique NamemRNA_P-wetherbeei_contig7427.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig7427.3.1 vs. uniprot
Match: A0A835Z666_9STRA (Armadillo-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z666_9STRA)

HSP 1 Score: 403 bits (1035), Expect = 1.900e-129
Identity = 207/313 (66.13%), Postives = 249/313 (79.55%), Query Frame = 1
Query:  136 LEQRITEVQQALDAVYNGSGQEHRNADLWLQGFQRTPEAWSVADALLTRNDAELQVTFFGAVTIHAKIRYDFAELPAETILPLRSSLINHLTEWSTARDVRPAVLTRLCLALAALALQTNWPNAVGDLTGALMSAGQQGQQQERAARVCLELLKVLPEECCNSHVVVSDAARDAFLGQLRASVPSLLGFLAGVAADSLGRDLMVQESVFKCLQSWLRYCDIPPDDLAAHPLFPAAFGALANPDLFETAVDFLVEVLRTYADPRRSMAVVAAAVPRAMALRPAFAAAVAEEDEDAARGYCRLFTEMGESYMELI 1074
            ++ +I EV++ALD VYNGSG +HR AD WLQ FQ+T EAW VAD+LL   DAELQVTFFGA+TIH+KIR+DF ELP+ T+  L+SSL  HLT W+TA+D+RPAV+TRLCLALAALA+QTNW  AV +L+ A+M +  +  QQ RAARV LEL+KVLPEECCN +V V+D  R+AF   L AS P LLGFL+ VAA  LG+D+MVQE++F+CLQSW+RY  IPP DLAAHPLFPAAF AL  PDLFE A D LV+VLRTY  P  SM +V   VPRAMAL  A+AA+VAEEDED ARG CRLFTEMGESY+E++
Sbjct:    1 MDVQIREVKKALDLVYNGSGADHRKADKWLQQFQQTAEAWQVADSLLMMPDAELQVTFFGAMTIHSKIRFDFHELPSATLPSLKSSLTAHLTRWATAKDLRPAVVTRLCLALAALAVQTNWTGAVQELSSAIMQSAPR-DQQGRAARVVLELMKVLPEECCNKNVAVADDLREAFRQHLDASAPLLLGFLSEVAAGPLGQDVMVQETIFQCLQSWVRYTSIPPADLAAHPLFPAAFDALRTPDLFEAAADLLVQVLRTYCHPEDSMPIVKIMVPRAMALDAAYAASVAEEDEDTARGLCRLFTEMGESYLEML 312          
BLAST of mRNA_P-wetherbeei_contig7427.3.1 vs. uniprot
Match: D8LR94_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LR94_ECTSI)

HSP 1 Score: 298 bits (762), Expect = 4.040e-89
Identity = 177/368 (48.10%), Postives = 222/368 (60.33%), Query Frame = 1
Query:  133 ALEQRITEVQQALDAVYNGSGQEHRNADLWLQGFQRTPEAWSVADALLTRNDAELQVTFFGAVTIHAKIRYDFAELPAETILPLRSSLINHLTEWSTARDVRPAVLTRLCLALAALALQTNWPNAVGDLTGALMSAGQQGQQQERAARVCLELLK------------------------------------------------------VLPEECCNSHVVVSDAARDAFLGQLRASVPSLLGFLAGVAADSLGRDLMVQESVFKCLQSWLRYCDIPPDDLAAHPLFPAAFGALANPDLFETAVDFLVEVLRTYADPRRSMAVVAAAVPRAMALRPAFAAAVAEEDEDAARGYCRLFTEMGESYMELI 1074
            A++Q + E   AL+AVYNGSG  H+ AD WLQ FQR+ EAWSVADA+L    AEL VTFF A TIHAKIR +F ELP E+I  LR SL++HL  W  A   + AV+TRLCLAL+ LALQ NWP+ + DLTG LM AG   +QQ++AARV LE +K                                                      VLPEE  N  +VV +A + AFL QL  S   LL  L  +AA  LG ++MVQE+VF+CLQSW+R+ ++P D++  +PL  AAF AL N +LFETAVD LVEVLR Y     +  +V   VP+AMAL  A+  ++ EED D ARG CRLFTEMGE+YM++I
Sbjct:    7 AIQQHVAEALAALNAVYNGSGPSHKEADRWLQEFQRSQEAWSVADAMLRMESAELNVTFFAAQTIHAKIRSNFRELPQESIPSLRDSLVDHLERWGGAG--KSAVITRLCLALSGLALQLNWPDVLRDLTGRLMRAGSV-EQQKQAARVLLEFMKEAGAGRPSYVHRALHVTCRYIWVRLGDDVVSRSSRQQSYLRSTAASVLVLDECQVLPEEAVNHRIVVPEATQVAFLQQLCESSGFLLTSLEQIAAGPLGAEIMVQETVFQCLQSWVRHVNVPGDEVVRNPLLSAAFDALGNQELFETAVDLLVEVLRKY--KANNFLIVQLMVPKAMALEAAYMKSLEEEDADVARGLCRLFTEMGEAYMDVI 369          
BLAST of mRNA_P-wetherbeei_contig7427.3.1 vs. uniprot
Match: A0A7S2D4C3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D4C3_9STRA)

HSP 1 Score: 191 bits (485), Expect = 1.700e-50
Identity = 131/325 (40.31%), Postives = 175/325 (53.85%), Query Frame = 1
Query:  148 ITEVQQALDAVYNGSG----QEHRNADLWLQGFQRTPEAWSVADALLTRNDA-ELQVTFFGAVTIHAKIRYDFAELPAETILPLRSSLINHLTEWSTARDVRPAVLTRLCLALAALALQTNWPNAVGDLTGALMSAGQQGQQQERAARVCLELLKVLPEECCNSHVVVSDAARDAFLGQLRASVPSLLGFLAG-VAADSLGRDLMVQESVFKCLQSWLRYCDIPPDDLAAHPLFPAAFGALANPDL----FETAVDFLVEVLRTYADPRRSMAVVAAAVPRAMALRPAFAAAVA--EEDEDAARGYCRLFTEMGESYMELITDAQ 1086
            + +   A+   +N  G     E R AD WLQ FQ+TP AW + + +L    A   +V FF A T+H K+ YDF EL  E+   L  S+ +HL     A     A+L RLCLA AALA+Q N  + +  +T   +    +  Q+    ++ LEL+  LPEEC +  + VSD  R+AF   L  S   LL FL+  VA   +       E+V  CL SW+RY  I  D LA+  L  A    +A+  L    FET VD LVEVLR Y    ++M +V   VPR MAL+   AAA+A  E+  D +RG CRLFTEMGESY++LI   Q
Sbjct:    9 MAQFNSAMAVCFNPGGGVSPDERRQADEWLQHFQQTPAAWEICNGILVATPALSAEVCFFAANTLHNKVCYDFQELSPESQSQLHDSMSSHLMRHGLAPGASRALLKRLCLASAALAVQMNGRDIL--VTAPQLIDRAEPTQKIEVTKLVLELMGSLPEECNSRRINVSDDVRNAFQTSLDQSTQMLLTFLSQTVARPEVATSPDTLEAVLGCLGSWVRYSYITADALASQSLLTATLDLIASESLPESLFETGVDTLVEVLRRYGATEQNMPLVQVMVPRIMALQGRLAAAMAMGEDGLDTSRGLCRLFTEMGESYLDLILSPQ 331          
BLAST of mRNA_P-wetherbeei_contig7427.3.1 vs. uniprot
Match: A0A8H7Q217_MORIS (Importin N-terminal domain-containing protein n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7Q217_MORIS)

HSP 1 Score: 174 bits (442), Expect = 9.940e-45
Identity = 120/313 (38.34%), Postives = 167/313 (53.35%), Query Frame = 1
Query:  148 ITEVQQALDAVYNGSGQE-HRNADLWLQGFQRTPEAWSVADALLTRNDAELQVTFFGAVTIHAKIRYDFAELPAETILPLRSSLINHLTEWSTARDVRPAVLTRLCLALAALALQ-TNWPNAVGDLTGALMSAGQQGQQQERAARVCLELLKVLPEECCNSHVVV--SDAARDAFLGQLRASVPSLLGFLAGVAADSLGRDLMVQESVFKCLQSWLRYCDIPPDDLAAHPLFPAAFGALANPDLFETAVDFLVEVLRTYADPRRSMAVVAAAVPRAMALRPAFAAAVAEEDEDAARGYCRLFTEMGESYMELI 1074
            ++ V +AL  +Y+GS  +  + A  WL+ FQRTPEAWS AD L+  +++ L+   F A T   KI +D  EL     + LR SL+  L+ +  AR     + T+LCL++A LA+Q + W N VG L   L      G   E    + LE L VLPEE  N++ +    D  R      L  +   +L  LA V   S G    +Q SVFKCL SWLR  DI  ++LAA PL   AF AL   +LF+ AVD + E++    D +  M ++    P+ + L    A    EED+D  RGYCR+F E GE+YM L+
Sbjct:    6 VSRVTEALSTLYSGSDSDGKKEASRWLESFQRTPEAWSAADYLIKADESNLETKVFAAQTFRQKITFDLKELDEAGRMSLRDSLLQLLSVF--ARSGPQIINTQLCLSVAILAIQLSQWKNVVGQLVELL------GNSPETIPTL-LEFLTVLPEEVNNNNRIPIGDDEFRVRAAELLTDNSDEILKLLA-VYIQSSGTQTSIQNSVFKCLSSWLRTGDIDVNNLAASPLLDMAFTALKQEELFDVAVDVICEIIYETKDVQDYMPLIQVIYPKLVPLYNDLAIVKEEEDDDKFRGYCRIFVEAGEAYMLLL 308          
BLAST of mRNA_P-wetherbeei_contig7427.3.1 vs. uniprot
Match: A0A6U3U8S3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3U8S3_9STRA)

HSP 1 Score: 174 bits (440), Expect = 2.030e-44
Identity = 117/319 (36.68%), Postives = 173/319 (54.23%), Query Frame = 1
Query:  202 HRN-ADLWLQGFQRTPEAWSVADALLT-------RNDAELQVT-----FFGAVTIHAKIRYDFAELPAETILPLRSSLINHLTEWST-ARDVRPAVLTRLCLALAALALQTNWPNAVGDLTGALMSAGQQGQQQERAARVCLELLKVLPEECCNSHVVVSDAA-RDAFLGQLRASVPSLLGFLAGVAADSLGRDLMVQESVFKCLQSWLRYCDIPPDDLAAHPLFPAAFGALANP--DLFETAVDFLVEVLRTY-ADPRRSMAVVAAAVPRAMAL----------RPAFAAAVAEEDEDAARGYCRLFTEMGESYMELI 1074
            HR+ AD +L  FQR P AW V D LL          DA   +T     FF A T+H+K R +  +LP +T+  LR SL+ H +  +  +     A++TRL +A+ AL++Q NW + + D+   L+        +   AR  LEL K+LPEEC +  +V++D + R+ F   LR     +  F +    ++    L  QE+V +CLQSWLRY    P  + + PL P  F +L+N   DL+E AVD ++E++R Y +D   ++ ++   +P  MAL          +  F  A+  +DED  RGYCR+FTEMGESYM LI
Sbjct:   67 HRDKADAFLTQFQRLPVAWVVCDRLLALPTNGANSTDANAAMTLTQRRFFAAQTLHSKCRTEIHQLPPDTLPSLRDSLLQHFSNCALLSTGGEKALVTRLGMAVCALSVQMNWTSIIPDVMNNLLVP------RPELARAILELFKLLPEECSSDRLVLADESLRNQFHDMLRDQASHIWNFCSSALKEN-NVSLQTQENVLQCLQSWLRYVPANPAMIESSPLLPWIFHSLSNSNNDLYELAVDVVIEIVRMYPSDYESNVGLIQKVIPLVMALGQPDSSENAPKSPFQNALTAQDEDGLRGYCRIFTEMGESYMSLI 378          
BLAST of mRNA_P-wetherbeei_contig7427.3.1 vs. uniprot
Match: A0A1E3IZL8_9TREE (Transportin-3 n=2 Tax=Cryptococcus depauperatus TaxID=5208 RepID=A0A1E3IZL8_9TREE)

HSP 1 Score: 169 bits (427), Expect = 9.500e-43
Identity = 113/308 (36.69%), Postives = 164/308 (53.25%), Query Frame = 1
Query:  163 QALDAVYNGSGQEHRN-ADLWLQGFQRTPEAWSVADALLTRNDAELQVTFFGAVTIHAKIRYDFAELPAETILPLRSSLINHLTEWS--TARDVRPAVLTRLCLALAALALQT-NWPNAVGDLTGALMSAGQQGQQQERAARVCLELLKVLPEECCNSHVVVSDAARDAFLGQLRASVPSLLGFLAGVAADSLGRDLMVQESVFKCLQSWLRYCDIPPDDLAAHPLFPAAFGALANPDLFETAVDFLVEVLRTYADPRRSMAVVAAAVPRAMALRPAFAAAVAEEDEDAARGYCRLFTEMGESYMELI 1074
            QAL  +Y+    E +  A+ WL+ FQ   EAW +  +LL  ++A L+   F A T+ AKI YD ++LP E +LPLR SLI  L   S  +A     AVL +LCLAL+ LALQ   W NAVG +     S             V L  LK LPEE  N  + ++       L +L +     +  L  +   + G  + +Q +VF+ L+SWL+  ++    +AA PLF AAF ALA+  LF++AVD + +++    + + +M VV   +PR +ALRP       ++D D  RGYCR+  E GE Y  L+
Sbjct:    8 QALQTLYHNPDTEAKQRANKWLEEFQHGAEAWQICHSLLNAHEAPLESRLFSAQTLRAKITYDLSQLPREQLLPLRDSLIGILAPLSQPSAPSGSRAVLLQLCLALSDLALQMPEWENAVGTMIDRFGS-------DPSTVAVLLTFLKTLPEEATNPRIPLTPEEAQMLLSKLVSGSAERVLELLTIYIQAEGVTIPIQIAVFEALRSWLQAGEMNTTQVAATPLFDAAFHALASDQLFDSAVDVICDLIHETQELQDNMQVVQQIIPRIVALRPELD--THKDDPDRVRGYCRILCEAGECYTSLV 306          
BLAST of mRNA_P-wetherbeei_contig7427.3.1 vs. uniprot
Match: A0A8H3YJW2_9TREE (Importin N-terminal domain-containing protein n=1 Tax=Naganishia liquefaciens TaxID=104408 RepID=A0A8H3YJW2_9TREE)

HSP 1 Score: 168 bits (425), Expect = 1.820e-42
Identity = 113/308 (36.69%), Postives = 168/308 (54.55%), Query Frame = 1
Query:  166 ALDAVYNG-SGQEHRNADLWLQGFQRTPEAWSVADALLTRNDAELQVTFFGAVTIHAKIRYDFAELPAETILPLRSSLI---NHLTEWSTARDVRPAVLTRLCLALAALALQT-NWPNAVGDLTGALMSAGQQGQQQERAARVCLELLKVLPEECCNSHVVVSDAARDAFLGQLRASVPSLLGFLAGVAADSLGRDLMVQESVFKCLQSWLRYCDIPPDDLAAHPLFPAAFGALANPDLFETAVDFLVEVLRTYADPRRSMAVVAAAVPRAMALRPAFAAAVAEEDEDAARGYCRLFTEMGESYMELI 1074
            A+ A+++    Q  + A+ WL  FQ T EAW     LLT  +A  +     A T+ +K+ YD A+LP E++LPLR SL+   +H T  +     R A+ T+LCLALA LA Q   W + +    G + S G + +  E    + LE LKVL EE  NS + +S A       +L +     +  L  +   + G    VQ +VF  L++WL+  +I    +A   LF  +F ALAN +LF+ AVD + +++    +   +  VV   VP+ +ALRP F  AV +ED+DA RGYCR+FTE GE+Y +L+
Sbjct:   19 AIQALFHDPDAQAKKRANEWLSEFQHTSEAWQTCHTLLTAPEAPQEARMVAAQTLRSKVVYDLAQLPRESVLPLRDSLLQSLSHFTNTAAPAGSR-AITTQLCLALADLAYQLPEWKDVIA---GMVDSFGSRVESVE----MLLEFLKVLVEEAGNSRIPLSSAEAAERSSELLSDQRDKVLGLLEMYLSAQGVTPRVQTAVFDTLRAWLQAGEIDAGMIAQTRLFQFSFDALANIELFDAAVDVICDMIHETQEVEDNQQVVEMIVPKVIALRPVFDQAVKDEDDDAVRGYCRIFTEAGETYRQLV 318          
BLAST of mRNA_P-wetherbeei_contig7427.3.1 vs. uniprot
Match: A0A8K0JLU6_9TREE (Uncharacterized protein n=1 Tax=Filobasidium floriforme TaxID=5210 RepID=A0A8K0JLU6_9TREE)

HSP 1 Score: 166 bits (421), Expect = 6.170e-42
Identity = 113/308 (36.69%), Postives = 175/308 (56.82%), Query Frame = 1
Query:  166 ALDAVY-NGSGQEHRNADLWLQGFQRTPEAWSVADALLTRNDAELQVTFFGAVTIHAKIRYDFAELPAETILPLRSSLINHLTEWS--TARDVRPAVLTRLCLALAALALQT-NWPNAVGDLTGALMSAGQQGQQQERAARVCLELLKVLPEECCNSHVVVS-DAARDAFLGQLRASVPSLLGFLAGVAADSLGRDLMVQESVFKCLQSWLRYCDIPPDDLAAHPLFPAAFGALANPDLFETAVDFLVEVLRTYADPRRSMAVVAAAVPRAMALRPAFAAAVAEEDEDAARGYCRLFTEMGESYMELI 1074
            A++A++ N   +E + A+ WL  FQ T EAW     +LT  ++ L+     A T+ +K+ YD ++LPA+++  LR S I  LT +S  TA     A++T+LCLAL+ LA Q   W + V    G + + G + +  E    + LE LK L EE  N  + +S   ARD     L +    +LG LA +  ++ G    +Q  VF+ L+SWL+  ++    +A  PLF  AF AL N +LF+ AVD + +++    +   ++ VV   VPR +ALR AF  AV+ E++D+ RG+CR+FTE GE+Y +LI
Sbjct:   14 AVNALFTNPDKEEKKRANEWLSEFQHTNEAWQTCHTILTSAESPLEARIMAAQTLRSKVVYDLSQLPADSLPALRDSFIQSLTTFSSPTAPTGSRAIVTQLCLALSDLAFQMPEWKDVV---PGMIENFGTRVECVE----MLLEFLKCLVEEAGNGRIPISGQQARDRSEELLTSQTERILGLLA-MYINAAGVTARLQGLVFETLRSWLQAGELDATLIARSPLFAFAFDALGNIELFDHAVDVVCDLIHETQEVEDNVEVVQLIVPRVIALRDAFHQAVSSEEDDSVRGFCRIFTEAGETYRQLI 313          
BLAST of mRNA_P-wetherbeei_contig7427.3.1 vs. uniprot
Match: A0A8H7PX27_9FUNG (Uncharacterized protein n=1 Tax=Umbelopsis vinacea TaxID=44442 RepID=A0A8H7PX27_9FUNG)

HSP 1 Score: 164 bits (416), Expect = 2.890e-41
Identity = 110/313 (35.14%), Postives = 167/313 (53.35%), Query Frame = 1
Query:  148 ITEVQQALDAVYNGSGQE-HRNADLWLQGFQRTPEAWSVADALLTRNDAELQVTFFGAVTIHAKIRYDFAELPAETILPLRSSLINHLTEWSTARDVRPAVL-TRLCLALAALALQTN-WPNAVGDLTGALMSAGQQGQQQERAARVCLELLKVLPEECCNSH-VVVSDAARDAFLGQLRASVPSLLGFLAGVAADSLGRDLMVQESVFKCLQSWLRYCDIPPDDLAAHPLFPAAFGALANPDLFETAVDFLVEVLRTYADPRRSMAVVAAAVPRAMALRPAFAAAVAEEDEDAARGYCRLFTEMGESYMELI 1074
            ++ V +AL+++Y+    E  + A+ WL+ FQ+T +AWS AD L+  +D+ ++   F A T   KI +D  EL     + LR SL++ L+ ++T     P V+ T+LCL+LA LA+Q   W N V        ++ +            LE L VLPEE  N++ + + D    +   +L  +    +  L  V   S G D  +Q SVFKCL SWLR  DI  + LA +PL   AF AL + +LF+ AVD + E++    D +  M ++    P+ + L    A    EED+D  RGYCR+F E GE+YM L+
Sbjct:    6 VSRVTEALNSLYSSQDSEAKKEANRWLESFQKTADAWSAADYLIKADDSNIETKLFAAQTFRQKITFDLKELDESARVSLRDSLLSLLSGYATTG---PQVINTQLCLSLAILAIQMPAWKNVVAQFVELFGNSAE-------TIPTLLEFLTVLPEEVNNNNRIPIGDEEFRSRATELLTNNSDEILKLLAVYIQSSGSDTAIQNSVFKCLSSWLRTGDIDVNKLANNPLLDLAFRALRDEELFDIAVDVVCEIIYETKDVQDYMPLIQVIYPKLVPLYQDLAIVKDEEDDDKFRGYCRIFIEAGEAYMLLL 308          
BLAST of mRNA_P-wetherbeei_contig7427.3.1 vs. uniprot
Match: S2JEE2_MUCC1 (Importin N-terminal domain-containing protein n=3 Tax=Mucor TaxID=4830 RepID=S2JEE2_MUCC1)

HSP 1 Score: 164 bits (415), Expect = 3.460e-41
Identity = 110/311 (35.37%), Postives = 167/311 (53.70%), Query Frame = 1
Query:  151 TEVQQALDAVYNGSG-QEHRNADLWLQGFQRTPEAWSVADALLTRNDAELQVTFFGAVTIHAKIRYDFAELPAETILPLRSSLINHLTEWSTARDVRPAVLTRLCLALAALALQT-NWPNAVGDLTGALMSAGQQGQQQERAARVCLELLKVLPEECCNS-HVVVSDAARDAFLGQLRASVPSLLGFLAGVAADSLGRDLMVQESVFKCLQSWLRYCDIPPDDLAAHPLFPAAFGALANPDLFETAVDFLVEVLRTYADPRRSMAVVAAAVPRAMALRPAFAAAVAEEDEDAARGYCRLFTEMGESYMELI 1074
            T V +AL ++Y+ +  Q +R A  WL+ FQ+ PEAW VAD L+   DA L+   F A T   KI YD  EL  E  L LR SL++ L ++S       AV+ +LCLA+A LA+Q   W   + DL        ++  +    +   LE+LK+LPEE  N+  + ++D    +   +L  S    +  L  +   S G D+ +QE VFKC  SW+R  ++  + ++A PL   +F  L +P+LF+ AVD + E++    D     +++    P    +    + A+ EEDEDA RGY R+F E GE+Y+ LI
Sbjct:    7 TRVLEALSSLYSTTDRQSNREASRWLEAFQKKPEAWVVADYLIKLPDANLETRLFAAQTFKQKITYDLRELDVEARLQLRDSLVDLLWQFSNGPK---AVMIQLCLAIADLAIQLLQWKTVIPDLV-------EKFGKTPHGSICLLEILKILPEEMNNNTRLPLTDYEYKSRGEELIDSNAKQVLDLLTMYMQSSGNDVDLQERVFKCFSSWIRTGEMDINWISASPLLELSFKGLESPELFDVAVDVISEIIYETRDVNECRSIIEQIYPCFATMLQKLSEAIEEEDEDAVRGYGRIFAEAGEAYINLI 307          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7427.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z666_9STRA1.900e-12966.13Armadillo-type protein n=1 Tax=Tribonema minus Tax... [more]
D8LR94_ECTSI4.040e-8948.10Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2D4C3_9STRA1.700e-5040.31Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A8H7Q217_MORIS9.940e-4538.34Importin N-terminal domain-containing protein n=1 ... [more]
A0A6U3U8S3_9STRA2.030e-4436.68Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A1E3IZL8_9TREE9.500e-4336.69Transportin-3 n=2 Tax=Cryptococcus depauperatus Ta... [more]
A0A8H3YJW2_9TREE1.820e-4236.69Importin N-terminal domain-containing protein n=1 ... [more]
A0A8K0JLU6_9TREE6.170e-4236.69Uncharacterized protein n=1 Tax=Filobasidium flori... [more]
A0A8H7PX27_9FUNG2.890e-4135.14Uncharacterized protein n=1 Tax=Umbelopsis vinacea... [more]
S2JEE2_MUCC13.460e-4135.37Importin N-terminal domain-containing protein n=3 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7427contigP-wetherbeei_contig7427:1873..2958 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LR94
PFAMsCHORD,Xpo1
Model size1087
Max annot lvl2759|Eukaryota
KEGG rclassRC00017
KEGG koko:K05288,ko:K15436
KEGG ReactionR05923,R08107
KEGG Pathwayko00563,ko01100,map00563,map01100
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.93e-90
EggNOG OGsKOG2081@1|root,KOG2081@2759|Eukaryota
Descriptionnuclear localization sequence binding
Cds size960
COG categoryK
BRITEko00000,ko00001,ko03016
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186980.725789-UTR-P-wetherbeei_contig7427:1872..19981683186980.725789-UTR-P-wetherbeei_contig7427:1872..1998Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig7427 1873..1998 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186980.7366629-CDS-P-wetherbeei_contig7427:1998..29581683186980.7366629-CDS-P-wetherbeei_contig7427:1998..2958Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7427 1999..2958 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7427.3.1prot_P-wetherbeei_contig7427.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7427 1999..2958 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7427.3.1

>prot_P-wetherbeei_contig7427.3.1 ID=prot_P-wetherbeei_contig7427.3.1|Name=mRNA_P-wetherbeei_contig7427.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=320bp
MVALEQRITEVQQALDAVYNGSGQEHRNADLWLQGFQRTPEAWSVADALL
TRNDAELQVTFFGAVTIHAKIRYDFAELPAETILPLRSSLINHLTEWSTA
RDVRPAVLTRLCLALAALALQTNWPNAVGDLTGALMSAGQQGQQQERAAR
VCLELLKVLPEECCNSHVVVSDAARDAFLGQLRASVPSLLGFLAGVAADS
LGRDLMVQESVFKCLQSWLRYCDIPPDDLAAHPLFPAAFGALANPDLFET
AVDFLVEVLRTYADPRRSMAVVAAAVPRAMALRPAFAAAVAEEDEDAARG
YCRLFTEMGESYMELITDAQ
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mRNA from alignment at P-wetherbeei_contig7427:1873..2958+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7427.3.1 ID=mRNA_P-wetherbeei_contig7427.3.1|Name=mRNA_P-wetherbeei_contig7427.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1086bp|location=Sequence derived from alignment at P-wetherbeei_contig7427:1873..2958+ (Phaeothamnion wetherbeei SAG_119_79)
TGCAAACTACATAGATTGCGAACTCCCTGAAAATGCGTTGCTTTATATAG CAACTGGACGGCGGCTGAGGACTCGGAGTGATTTGTAATATAGATTTAAA GAAAACAGCAGCGAAAAACAAAAAAAATGGTTGCGTTAGAGCAGCGCATC ACCGAGGTGCAGCAGGCACTCGATGCCGTGTACAATGGCAGCGGCCAGGA GCACCGCAACGCCGACCTGTGGCTGCAGGGGTTCCAGCGCACGCCTGAGG CGTGGTCCGTTGCCGACGCGCTTCTCACACGGAACGACGCCGAGCTCCAG GTCACCTTCTTCGGCGCCGTGACGATCCATGCGAAGATTCGCTACGACTT CGCCGAGCTGCCCGCCGAGACCATCCTCCCACTGCGTAGCTCGCTCATTA ACCACCTCACGGAGTGGTCCACCGCCCGCGACGTCCGCCCGGCCGTGCTC ACGCGCCTGTGCCTCGCGCTGGCCGCGCTAGCGCTGCAGACCAACTGGCC GAACGCCGTCGGCGACTTGACGGGCGCCCTGATGTCCGCGGGCCAGCAGG GGCAGCAGCAGGAGCGTGCCGCCCGCGTCTGCCTCGAGCTGCTGAAGGTG CTCCCGGAGGAATGCTGCAACTCGCACGTCGTCGTCTCAGACGCCGCGCG CGACGCCTTTCTGGGGCAGCTGCGCGCCAGCGTCCCGTCCCTGCTTGGAT TCCTCGCCGGCGTCGCCGCCGACTCGCTCGGCCGCGACCTCATGGTGCAG GAGAGCGTCTTCAAATGTCTCCAAAGCTGGCTGCGCTACTGCGACATCCC GCCTGACGACCTCGCCGCCCATCCGCTCTTTCCGGCCGCCTTCGGCGCGC TGGCGAACCCAGACCTGTTCGAGACAGCCGTCGACTTCCTCGTGGAAGTG CTCCGGACCTACGCGGACCCGCGGCGGAGCATGGCGGTGGTGGCGGCGGC GGTGCCGCGGGCGATGGCGCTGCGGCCGGCGTTCGCTGCCGCCGTTGCAG AGGAGGACGAAGACGCGGCGCGCGGGTACTGCCGCCTCTTCACCGAGATG GGCGAGAGCTACATGGAGCTCATCACCGACGCGCAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig7427:1873..2958+

>mRNA_P-wetherbeei_contig7427.3.1 ID=mRNA_P-wetherbeei_contig7427.3.1|Name=mRNA_P-wetherbeei_contig7427.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=960bp|location=Sequence derived from alignment at P-wetherbeei_contig7427:1873..2958+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGTTGCGTTAGAGCAGCGCATCACCGAGGTGCAGCAGGCACTCGATGC
CGTGTACAATGGCAGCGGCCAGGAGCACCGCAACGCCGACCTGTGGCTGC
AGGGGTTCCAGCGCACGCCTGAGGCGTGGTCCGTTGCCGACGCGCTTCTC
ACACGGAACGACGCCGAGCTCCAGGTCACCTTCTTCGGCGCCGTGACGAT
CCATGCGAAGATTCGCTACGACTTCGCCGAGCTGCCCGCCGAGACCATCC
TCCCACTGCGTAGCTCGCTCATTAACCACCTCACGGAGTGGTCCACCGCC
CGCGACGTCCGCCCGGCCGTGCTCACGCGCCTGTGCCTCGCGCTGGCCGC
GCTAGCGCTGCAGACCAACTGGCCGAACGCCGTCGGCGACTTGACGGGCG
CCCTGATGTCCGCGGGCCAGCAGGGGCAGCAGCAGGAGCGTGCCGCCCGC
GTCTGCCTCGAGCTGCTGAAGGTGCTCCCGGAGGAATGCTGCAACTCGCA
CGTCGTCGTCTCAGACGCCGCGCGCGACGCCTTTCTGGGGCAGCTGCGCG
CCAGCGTCCCGTCCCTGCTTGGATTCCTCGCCGGCGTCGCCGCCGACTCG
CTCGGCCGCGACCTCATGGTGCAGGAGAGCGTCTTCAAATGTCTCCAAAG
CTGGCTGCGCTACTGCGACATCCCGCCTGACGACCTCGCCGCCCATCCGC
TCTTTCCGGCCGCCTTCGGCGCGCTGGCGAACCCAGACCTGTTCGAGACA
GCCGTCGACTTCCTCGTGGAAGTGCTCCGGACCTACGCGGACCCGCGGCG
GAGCATGGCGGTGGTGGCGGCGGCGGTGCCGCGGGCGATGGCGCTGCGGC
CGGCGTTCGCTGCCGCCGTTGCAGAGGAGGACGAAGACGCGGCGCGCGGG
TACTGCCGCCTCTTCACCGAGATGGGCGAGAGCTACATGGAGCTCATCAC
CGACGCGCAG
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