mRNA_P-wetherbeei_contig742.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig742.4.1
Unique NamemRNA_P-wetherbeei_contig742.4.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig742.4.1 vs. uniprot
Match: A0A6H5L825_9PHAE (Methyltransf_11 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L825_9PHAE)

HSP 1 Score: 286 bits (731), Expect = 1.160e-89
Identity = 168/348 (48.28%), Postives = 214/348 (61.49%), Query Frame = 1
Query:    4 TRLYSHFLVGNDLYNGGDLEGAVAEYRKALEYDPQHADTLCNMGSALQXXXXXXXXXXXXXXXXXXXXXXXXAHFNLAILLHDDELDIAIEHYQAXXXXXXXXXXXXAXLGSAMHHLQQYKEAVTSYQEAIELYEAEDGGTGLA-AQQFLPALHFQLGTALSSLPDDACAGGTCSEHAVEQLRKALRLDPDNAMAQHSLGALLADSELAGASPEYVKRLFDDYAATFDESLAGLKYQAPELLREVVKEDRDVYPVLFDMGCGTGLCGPLFRSIAGKMIGVDLSPKMVEVARGREVYDELAVGDVIAEMDARAAGGERADMIIAADVLVYMGALDKLFESASRYCSENG 1044
             R Y+HF+  N  Y   +LE AV EY+ AL++DP HADT+CN+GSALQ                        AHFNL +LLHD+++D AIEH   XXXXXXXXXXXX X  SA H     ++A+  YQEAI LYE E+   GL      L  L++ +   L  LPD  C  G C    +E LR+ LR DP++A+ +H+L + L DS +  ASPEYVK LFD YA +FDESL GL Y +PE LREV+   R  Y  +FD GCGTGL GPLFR I   +IGVDLS  M+E A  R+VYD LAVG++   +  RA  G R D+++AADVLVY+G L+ +F S+  Y  + G
Sbjct:   31 ARAYAHFVQANTYYTDQELERAVEEYKTALKFDPLHADTMCNLGSALQDLGDYPLSRHYYSKAVQANPYHAVAHFNLGLLLHDEDIDTAIEHXXXXXXXXXXXXXXXXXXXSAYHREDDLEDALGCYQEAIRLYETEEAYEGLPFTDDVLATLNYHVSIILGRLPDGRCLQGGCLSQRMEILRRCLRHDPEHALCKHNLESALGDSSMTKASPEYVKALFDYYAVSFDESLKGLDYSSPEALREVLGGLRPRYKEVFDAGCGTGLLGPLFRDITDTLIGVDLSEGMLEAALDRDVYDALAVGEMGEILRMRAGEGVRGDLVVAADVLVYIGELEDIFGSSREYLGDGG 378          
BLAST of mRNA_P-wetherbeei_contig742.4.1 vs. uniprot
Match: A0A7S3XSZ3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XSZ3_HETAK)

HSP 1 Score: 208 bits (529), Expect = 1.230e-60
Identity = 130/340 (38.24%), Postives = 184/340 (54.12%), Query Frame = 1
Query:   52 GDLEGAVAEYRKALEYDPQHADTLCNMGSALQXXXXXXXXXXXXXXXXXXXXXXXXAHFNLAILLHDDEL-DIAIEHYQAXXXXXXXXXXXXAXLGSAMHHLQQYKEAVTSYQEAIELYEAEDGGTGLAAQQFLPALHFQLGTALSSLPDDACAGGTCSEHAVEQLRKALRLDPDNAMAQHSLGALLADSELAGASPEYVKRLFDDYAATFDESLAGLKYQAPELLREVVKE-----DRDVYPVLFDMGCGTGLCGPLFRSIAGKMIGVDLSPKMVEVARGREVYDELAVGDVIAEM-DAR--AAGGERADMIIAADVLVYMGALDKLFESASRYCSENG 1044
            GD EGAV  Y  ALE +P HAD                                  A++N A+LL D    + AI HY+             A LG     +     AV S  EA+EL EA+  G   AA   L  L +QLG+AL++L  + C  G+C EHA E  RKALR  P +  A H+L A+LAD  +  AS +YVK LF+DYA TFD SL+GL+Y+APEL+ + + +      +  +  + D GCGTGL GPLF  I+ K+IG+D+S  M++ A+ R +Y  L  GD++AE+ D +  +  G+  D+++AADVLVY+G L+  FE+++     +G
Sbjct:    4 GDYEGAVEAYIAALELEPTHAD----------------------------------ANYNFAMLLQDGGANENAIYHYKKTVESDPDYFEAWANLGGLQLLIGDQAGAVKSLGEALELAEADPNGAAAAAP-LLATLQYQLGSALAALDPERCMFGSCPEHAAEAFRKALRYQPGHIQADHALKAVLADPTVETASTDYVKSLFNDYAETFDSSLSGLEYKAPELISQTMHKLLNAAGKKTFNTVVDAGCGTGLIGPLFEGISRKLIGIDISDGMLQKAKERGMYASLREGDIVAELKDIKLDSDDGKLTDLVVAADVLVYIGNLEAFFEASAELLQSSG 308          
BLAST of mRNA_P-wetherbeei_contig742.4.1 vs. uniprot
Match: A0A835YWA3_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWA3_9STRA)

HSP 1 Score: 209 bits (532), Expect = 4.120e-60
Identity = 148/360 (41.11%), Postives = 198/360 (55.00%), Query Frame = 1
Query:   25 LVGNDLYNGGDLEGAVAEYRKALEYDPQHADTLCNMGSALQXXXXXXXXXXXXXXXXXXXXXXXXAH--------------FNLAILLHDDELDIAIEHYQAXXXXXXXXXXXXAXLGSAMHHLQQYKEAVTSYQEAIELY----EAEDGGTGLAAQ-------QFLPALHFQLGTALSSLPDDACAGGTCSEHAVEQLRKALRLDPDNAMAQHSLGALLADSELAGASPEYVKRLFDDYAATFDESLAGLKYQAPE-LLREVVKE-DRDVYPVLFDMGCGTGLCGPLFRSIAGKMIGVDLSPKMVEVARGREVYDELAVGDVIAEMDARAAGGERADMIIAADVLVYMGALDKLFESAS 1023
            L+GNDLY  GDL GA++ Y+KALE+D  HAD+L N+GSALQ                        A+              +NLA+LLH+D           XXXXXXXXXXXX XLG+A H  Q Y +AV  Y EA+EL+    EAE      A          +L  LH + G A+  +PD  C    C   A+E L  +L+ DPDN + +HSL AL  +  +  +SPEY+ RLFDD+A TFD++L  L Y +P+ L RE+    D   + V+ D GCGTGL G L R    +++G+DLSPKMV+ AR    YDEL VG+ IAE   +  G  +AD ++AADV +Y G L    ++ +
Sbjct:   14 LLGNDLYTAGDLPGAISVYKKALEHDETHADSLTNLGSALQDLAWQREEAGAQTESLRLLEEAVQAYRAAVAANPYHAMASYNLALLLHNDAPQEXXXXXXXXXXXXXXXXXXXXXLGAAYHAQQMYAQAVPHYLEAVELFTAQLEAERASPAAADDALIGQYTSYLAVLHARCGEAMVRMPDSECGDAGCVADAIEHLTMSLQYDPDNELTRHSLAAL-REERVQASSPEYIARLFDDFAPTFDDNLTDLGYTSPQALFRELEAVLDGGKFDVVVDAGCGTGLMGKLVRGRCARLVGIDLSPKMVDRARTTGAYDELHVGE-IAETLRQMPG--QADAVVAADVFLYAGDLSPALDACA 369          
BLAST of mRNA_P-wetherbeei_contig742.4.1 vs. uniprot
Match: A0A6U5CXU1_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U5CXU1_HEMAN)

HSP 1 Score: 194 bits (494), Expect = 6.320e-54
Identity = 159/370 (42.97%), Postives = 215/370 (58.11%), Query Frame = 1
Query:    1 MTRLYSHFLVGNDLYNGGDLEGAVAEYRKALEYDPQHADTLCNMGSAL---------QXXXXXXXXXXXXXXXXXXXXXXXXAHFNLAILLHD-DELDIAIEHYQAXXXXXXXXXXXXAXLGSAMHHLQQYKEAVTSYQEAIELYEAEDGGTGLAAQQ-FLPALHFQLGTALSSLPDDACAGGTCSEHAVEQLRKALRLDPDNAMAQHSLGALLADSELAGASPEYVKRLFDDYAATFDESL-AGLKYQAPELLREVVKE-----DRDVYPVLFDMGCGTGLCGPLFRSIAGKMIGVDLSPKMVEVARGREVYDELAVGDVIAEMDARAAG-----GERADMIIAADVLVYMGALDKLFESASRYCSENG 1044
            + R    FL GN      D   AV  YR+AL+ DP+HAD   N+G+A+         Q       XXXXXXXXXXXXXXXXX      +L H  + LD++I +   XXXXXXXXXXXX X                     IE+ E+  GGT ++ +   L  LH+ LG ALSSLP + C G  C E A +Q R +LR +P+N  A+H+L AL++D E   AS  YVK LFD+YA +FD++L A L Y+AP+LL E V E        V+ VLFD GCGTGLCGPLFR++   ++GVDLS +M+  A  R +YDEL  GD++  ++   A      G   D+++AADV VY+GAL+++F + +   ++ G
Sbjct:   75 LKRAEELFLKGNAYLQDQDFGNAVLSYREALDADPKHADAWTNLGNAMSQAIPYSENQKKGLFNEXXXXXXXXXXXXXXXXXXXXXXGVLYHTHNRLDMSIPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEMIES--GGTIMSDKAGTLSMLHYLLGQALSSLPPNRCLGSPCPERAAQQFRTSLRHNPNNEEAKHALSALISDPETTSASAAYVKSLFDEYAESFDKALVADLNYRAPQLLHEKVSEFVGSKPLPVFGVLFDAGCGTGLCGPLFRNMTRTLVGVDLSGEMIRKATERGLYDELVEGDLVESLNQYGASEGKHKGTYIDIVLAADVFVYIGALEQIFSACAASLNKGG 442          
BLAST of mRNA_P-wetherbeei_contig742.4.1 vs. uniprot
Match: A0A431VLK0_9PROT (Tetratricopeptide repeat protein n=1 Tax=Azospirillum griseum TaxID=2496639 RepID=A0A431VLK0_9PROT)

HSP 1 Score: 140 bits (352), Expect = 3.760e-34
Identity = 86/181 (47.51%), Postives = 110/181 (60.77%), Query Frame = 1
Query:  526 EHAVEQLRKALRLDPDNAMAQHSLGALLADSELAGASPEYVKRLFDDYAATFDESLAG-LKYQAPELLREVVKEDRDVYPV------LFDMGCGTGLCGPLFRSIAGKMIGVDLSPKMVEVARGREVYDELAVGDVIAEMDARAAGGERADMIIAADVLVYMGALDKLFESASRYCSENGR 1047
            + A+  LR+A  LDPD+ +   +    L   E A  S  YV+ LFD YA  FD  L G L Y AP+LLR  V  DR   P       + D+GCGTGL G  FR +AG + GVDLSP+MV+ AR R +YDELAVGDV+A MDA  A     D+++AADVLVY+G L  +F++A+R     GR
Sbjct:  202 DKALVALRRARDLDPDDRLGSAAAIQALEAGEGADLSAAYVRALFDRYADRFDRDLLGKLGYAAPDLLRAAV--DRVSQPTSEAGLRILDLGCGTGLAGVTFRPLAGFLAGVDLSPRMVDKARDRRIYDELAVGDVVAAMDAAPAAW---DLLVAADVLVYIGDLAPVFQAAARALVPGGR 377          
BLAST of mRNA_P-wetherbeei_contig742.4.1 vs. uniprot
Match: A0A7C7CC58_9GAMM (Methyltransferase domain-containing protein (Fragment) n=1 Tax=Chromatiaceae bacterium TaxID=2049432 RepID=A0A7C7CC58_9GAMM)

HSP 1 Score: 131 bits (330), Expect = 6.070e-33
Identity = 84/188 (44.68%), Postives = 114/188 (60.64%), Query Frame = 1
Query:  463 FQLGTALSSLPDDACAGGTCSEHAVEQLRKALRLDPDNAMAQHSLGALLADSELAGASP-EYVKRLFDDYAATFDESLAG-LKYQAPELLREVVKE---DRDVYPVLFDMGCGTGLCGPLFRSIAGKMIGVDLSPKMVEVARGREVYDELAVGDVIAEMDARAAGGERADMIIAADVLVYMGALDKLF 1011
            F LG A  S+ +        S+ A+E  +K L LD  +  AQ+ L A+L   E+   SP +YVK LFD YA TFD +L   L+Y+ P LL E V+    + +    + D+GCGTGL GPLFR+IA +++GVDLSPKMVE AR R VYDEL V D++  +          D+++AADV VY+G LD +F
Sbjct:   12 FHLGVAYQSIKN--------SDKAIELYQKVLELDAGHDSAQYFL-AILGAVEVPDKSPTDYVKDLFDGYAETFDNALVNNLEYRTPTLLFEWVERYIGETEKNLDIMDLGCGTGLIGPLFRNIAARLLGVDLSPKMVEKARERNVYDELFVDDLVPPLQDNKGA---LDLVLAADVFVYLGDLDDVF 187          
BLAST of mRNA_P-wetherbeei_contig742.4.1 vs. uniprot
Match: A0A2S2CRI2_9PROT (SAM-dependent methyltransferase n=2 Tax=Azospirillum thermophilum TaxID=2202148 RepID=A0A2S2CRI2_9PROT)

HSP 1 Score: 136 bits (342), Expect = 9.430e-33
Identity = 84/179 (46.93%), Postives = 111/179 (62.01%), Query Frame = 1
Query:  526 EHAVEQLRKALRLDPDNAMAQHSLGALLADSELAGASPEYVKRLFDDYAATFDESLAG-LKYQAPELLREVVKEDRDVYPV----LFDMGCGTGLCGPLFRSIAGKMIGVDLSPKMVEVARGREVYDELAVGDVIAEMDARAAGGERADMIIAADVLVYMGALDKLFESASRYCSENGR 1047
            + A+  LR+A  LDPD+     +L A L   E A  S  YV+ LFD YA  FD  L G L Y AP+LLR+ V  DR   P     +FD+GCGTGL G  FR +AG + GVDLSP+MV+ AR R +YD L VGDV+A +++  A     D+++AADVLVY+G L  LF +A+ + +  GR
Sbjct:  201 DKALAALRRARELDPDDGHGGAALIAALEAGEGADLSAAYVRALFDRYADRFDRDLVGKLGYAAPDLLRDAV--DRLGGPRGGLRVFDLGCGTGLAGVAFRPLAGHLAGVDLSPRMVDKARDRRLYDSLEVGDVVAALESSDAPW---DLLVAADVLVYIGDLAPLFRAAAGHLAAGGR 374          
BLAST of mRNA_P-wetherbeei_contig742.4.1 vs. uniprot
Match: UPI001FE6ACCA (tetratricopeptide repeat protein n=1 Tax=Azospirillum rugosum TaxID=416170 RepID=UPI001FE6ACCA)

HSP 1 Score: 135 bits (339), Expect = 1.990e-32
Identity = 90/201 (44.78%), Postives = 116/201 (57.71%), Query Frame = 1
Query:  457 LHFQLGTALSSL--PDDACAGGTCSEHAVEQLRKALRLDPDNAMAQHSLGALLADSELAGASPEYVKRLFDDYAATFDESLAG-LKYQAPELLREVVKEDRDVYPV-LFDMGCGTGLCGPLFRSIAGKMIGVDLSPKMVEVARGREVYDELAVGDVIAEMDARAAGGERADMIIAADVLVYMGALDKLFESASRYCSENGR 1047
            LH  +G A  +L  PD A A           LRKA  LD ++++   +L A L   E A  S  YV+ LFD YA  FD+ L G L Y APELLR  V        + + D+GCGTGL G  FR +A  + GVDLSP+MV+ AR R +YDEL VGDV+A +DA  AG    D+++AADVLVY+G L  +F +A+      GR
Sbjct:  171 LHHTIGRAWIALREPDKALAA----------LRKARDLDSEDSLGSAALIAALEAGEGADLSAAYVRALFDRYADRFDQDLVGKLGYAAPELLRRAVDRLGGGSGLRVLDLGCGTGLAGVAFRPLASHLAGVDLSPRMVDKARARALYDELWVGDVVAALDAAPAGW---DLLVAADVLVYIGDLAPVFRAAAEALRAGGR 358          
BLAST of mRNA_P-wetherbeei_contig742.4.1 vs. uniprot
Match: A0A1X7Q4U6_AZOLI (Predicted methyltransferase, contains TPR repeat n=2 Tax=Azospirillum TaxID=191 RepID=A0A1X7Q4U6_AZOLI)

HSP 1 Score: 135 bits (339), Expect = 2.700e-32
Identity = 83/188 (44.15%), Postives = 108/188 (57.45%), Query Frame = 1
Query:  526 EHAVEQLRKALRLDPDNAMAQHSLGALLADSELAGASPEYVKRLFDDYAATFDESLAG-LKYQAPELLREVVKEDRD-------------VYPVLFDMGCGTGLCGPLFRSIAGKMIGVDLSPKMVEVARGREVYDELAVGDVIAEMDARAAGGERADMIIAADVLVYMGALDKLFESASRYCSENGR 1047
            E A+  LR+A  LDP++ +    L A L   E A  S  YV+ LFD YA  FD+ L G L Y AP+LLR  V                    P + D+GCGTGL G  FR +AG + GVDLSP+MV+ AR R +YD+L VGDV+A +D   A     D+++AADVLVY+G LD +F +A+R     GR
Sbjct:  194 EKALSALRRARALDPEDRLGTAPLIAALEAGEGADLSAAYVRALFDRYADRFDQDLLGKLGYAAPDLLRSAVDRVSGSGARVGAGAIGPAAGPRVLDLGCGTGLAGVSFRPLAGFLAGVDLSPRMVDKARDRRLYDDLRVGDVVAALDEAPAAW---DLLVAADVLVYIGDLDPVFRAAARALVPGGR 378          
BLAST of mRNA_P-wetherbeei_contig742.4.1 vs. uniprot
Match: I2CRA6_NANGC (Tetratricopeptide repeat family protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CRA6_NANGC)

HSP 1 Score: 129 bits (325), Expect = 7.030e-32
Identity = 77/173 (44.51%), Postives = 108/173 (62.43%), Query Frame = 1
Query:  550 KALRLDPDNAMAQHSLGALLADSELAGASPEYVKRLFDDYAATFDESLAGLKYQAPELLREVV------KEDRDVYPV--LFDMGCGTGLCGPLFRSIAGKMIGVDLSPKMVEVARGREVYDELAVGDVIAEMDARAAGGERADMIIAADVLVYMGALDKLFESASRYCSENG 1044
            KAL  +P NA+A H+LGAL    +L GAS  Y+  LFD Y+ATFD SL  L+Y++PELLR  V      + +    P   + D GCGTGL G +FR+++  ++GVD+S +MV+ A+ R VYDEL VGD+  E+  R       D++++ADVLVYMG L+ +  S  +   E G
Sbjct:   10 KALEHNPKNAIAAHALGAL-GGEKLEGASLAYLAELFDSYSATFDASLHALEYKSPELLRRAVDGLLQGEGEAGKAPEWRVMDAGCGTGLSGLVFRNLSQHLLGVDVSRRMVQKAQARAVYDELVVGDMAEELLNRQG---TLDLVVSADVLVYMGRLEYIVGSVGKALKEKG 178          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig742.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L825_9PHAE1.160e-8948.28Methyltransf_11 domain-containing protein n=2 Tax=... [more]
A0A7S3XSZ3_HETAK1.230e-6038.24Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A835YWA3_9STRA4.120e-6041.11S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A6U5CXU1_HEMAN6.320e-5442.97Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A431VLK0_9PROT3.760e-3447.51Tetratricopeptide repeat protein n=1 Tax=Azospiril... [more]
A0A7C7CC58_9GAMM6.070e-3344.68Methyltransferase domain-containing protein (Fragm... [more]
A0A2S2CRI2_9PROT9.430e-3346.93SAM-dependent methyltransferase n=2 Tax=Azospirill... [more]
UPI001FE6ACCA1.990e-3244.78tetratricopeptide repeat protein n=1 Tax=Azospiril... [more]
A0A1X7Q4U6_AZOLI2.700e-3244.15Predicted methyltransferase, contains TPR repeat n... [more]
I2CRA6_NANGC7.030e-3244.51Tetratricopeptide repeat family protein n=1 Tax=Na... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig742contigP-wetherbeei_contig742:5991..8601 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LBV8
PFAMsGlyco_transf_41,Methyltransf_11,TPR_11,TPR_16,TPR_2,TPR_8
Model size1050
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons7
Evalue2.87e-91
EggNOG OGsCOG3914@1|root,KOG4626@2759|Eukaryota
Ec32 ortholog descriptionTetratricopeptide-like helical domain
Ec32 orthologEc-20_003450.1
Descriptionprotein N-acetylglucosaminyltransferase activity
Cds size1050
COG categoryO
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig742.4.1prot_P-wetherbeei_contig742.4.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig742 5991..8601 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186980.3223-CDS-P-wetherbeei_contig742:5990..61271683186980.3223-CDS-P-wetherbeei_contig742:5990..6127Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig742 5991..6127 +
1683186980.3378685-CDS-P-wetherbeei_contig742:6322..64701683186980.3378685-CDS-P-wetherbeei_contig742:6322..6470Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig742 6323..6470 +
1683186980.34784-CDS-P-wetherbeei_contig742:6750..68621683186980.34784-CDS-P-wetherbeei_contig742:6750..6862Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig742 6751..6862 +
1683186980.3617392-CDS-P-wetherbeei_contig742:7020..72231683186980.3617392-CDS-P-wetherbeei_contig742:7020..7223Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig742 7021..7223 +
1683186980.373429-CDS-P-wetherbeei_contig742:7565..77091683186980.373429-CDS-P-wetherbeei_contig742:7565..7709Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig742 7566..7709 +
1683186980.3823378-CDS-P-wetherbeei_contig742:8065..81851683186980.3823378-CDS-P-wetherbeei_contig742:8065..8185Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig742 8066..8185 +
1683186980.3913856-CDS-P-wetherbeei_contig742:8415..86011683186980.3913856-CDS-P-wetherbeei_contig742:8415..8601Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig742 8416..8601 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig742.4.1

>prot_P-wetherbeei_contig742.4.1 ID=prot_P-wetherbeei_contig742.4.1|Name=mRNA_P-wetherbeei_contig742.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=350bp
MTRLYSHFLVGNDLYNGGDLEGAVAEYRKALEYDPQHADTLCNMGSALQD
LGDVEESLELYLRAVDANPYHATAHFNLAILLHDDELDIAIEHYQAAIEA
DPTMADAWANLGSAMHHLQQYKEAVTSYQEAIELYEAEDGGTGLAAQQFL
PALHFQLGTALSSLPDDACAGGTCSEHAVEQLRKALRLDPDNAMAQHSLG
ALLADSELAGASPEYVKRLFDDYAATFDESLAGLKYQAPELLREVVKEDR
DVYPVLFDMGCGTGLCGPLFRSIAGKMIGVDLSPKMVEVARGREVYDELA
VGDVIAEMDARAAGGERADMIIAADVLVYMGALDKLFESASRYCSENGR*
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mRNA from alignment at P-wetherbeei_contig742:5991..8601+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig742.4.1 ID=mRNA_P-wetherbeei_contig742.4.1|Name=mRNA_P-wetherbeei_contig742.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2611bp|location=Sequence derived from alignment at P-wetherbeei_contig742:5991..8601+ (Phaeothamnion wetherbeei SAG_119_79)
ATGACGCGATTGTACAGCCATTTTTTGGTGGGAAATGATCTATACAACGG TGGCGACCTGGAAGGCGCGGTTGCTGAATATCGGAAAGCCCTGGAGTACG ATCCCCAACACGCCGACACCCTGTGCAACATGGGGAGGTGAGAGAGGGGG GTTAGGTTTCGCACTTGATGCGTCTTTTTTTCTGGAGGCCGTTGCTGTCG CTGCCGTGCCTACAGCTTTCCGCCATTCCCTCTGCTCAGGTCTCCCCGAC CCCGGCTCCGAAACCGGCACTTACACCCGAATCCCAAACCGAAACTGGAA ACAACGGAAAATGGAACTTGCAAAACTGACAGCGCGCTGCAGGATCTGGG TGACGTGGAGGAGTCATTGGAGCTCTACCTGAGGGCTGTCGACGCGAATC CGTACCATGCCACGGCCCATTTCAACCTCGCCATCCTCCTTCATGACGAT GAGCTCGACATTGCCATCGAGCACTACCAGGTAAACTGATTGCCTCCAAA CCAGCAGCAAGCAGCCTGCCGTCTTCTATCCGTTTTCTGTTTGGGGACTG TGCTGACGTAGAAGGTCGGACAATGCTTTCCTTGTCGTGTGCGTTTGCAT GTATTTTTGAAAGCCGCATCTGGAGTCTGGCTTAGCAAAGATGCGGTAAA TTTGTCTGAAAGCCGTTTGTAGGCAGCACGTCTGCGCTTACGTTCTCCTG GATCAGGAGGAAGTGCTCACTTGAACAAAATGTGTGCGTTCCATTTATTT GCATTGGCAGGCGGCAATCGAGGCAGACCCGACAATGGCGGATGCGTGGG CCAACCTGGGCAGCGCGATGCACCACCTGCAGCAGTACAAGGAAGCCGTC ACCAGCTACCAAGAGGCCATAGGTGATTTGGCAGACGCAACACTGGCTGC TTTGGGGGAGTAATTTCGCTACCCGCTTGTTTCTTGGCACCGCGACTCGA CGCCACTTGTGCTTTTAATTCTCCGTTCCCCCGCGCACTGTCCACCACCT GCCCAAACCTGAGATAAAACGGACCGACAGAGCTGTACGAGGCGGAGGAC GGCGGCACAGGCCTCGCCGCACAGCAGTTCCTACCGGCGCTGCACTTTCA GCTAGGAACTGCCCTCTCGTCGCTGCCCGACGACGCCTGTGCCGGTGGCA CGTGCTCGGAGCACGCCGTGGAGCAGCTCCGAAAGGCGCTGCGGCTCGAC CCCGACAACGCCATGGCCCAGCACTCCCTGGGAGTGAGTAAAGCAGATTG CCTTGGGTCGAGACTTTGACTGGCTGCCGCATAGCAAGGAGAACTGGAGC CAAATGGAAGCGGTTGGCGTGTGTTGCTCGCTGCTTCCTCTCAGAAGTCC TTGCTTAATTCTTGGAAGTGGGTTGCGGTTCTCGCTTCAGCGAACTTGGG TGGCTAGTGGGCGGCCACGGCGCGTCTGGCGGTCCGTCCATTCCGCTCTC CGCGACGGGCGGCGTAGGATGGCAACCTACAGCGAGTGGCTGACTGTCGG CTTTGTCTTCGTCGTTTTCTTTTTCTTCCTCGGCTTGTTTCGCCTTGCAT TCCTGCTCCAAAAACCACACCTCAGGCGCTGCTGGCAGACTCGGAGCTTG CGGGGGCGAGCCCGGAATACGTTAAGCGGCTCTTCGACGACTATGCCGCC ACCTTCGATGAGAGCCTCGCGGGGCTGAAATACCAGGCCCCTGAACTTTT AAGGGAGGTTGTGAAAGAAGTAGAGGTCAGTCTTTATTGGTGTATGCAGT TATCCGGGTGGGCAGTGTGTGTCGGTTTCGGGCGGCTCTTTCTTGGTTTC TATTCTTTTTGGTTGTAATTGGACAGTTGGGGCTTCCGTTCTACATTTAG GGTGGTTCCCTTTCCTTTCTTTCTTAGACACCAGAACGGCGGGACGCCAG GTGGTTGCATGTGGCGGCAGACTGTCGGCGGAACGGGTGTAGCGGCGGTC AGTACCATTGTCCTCATCGCAAGTCGTTGCCGGCCTCTGCCGACGCCAAC GCATTTTGAACCCGCTCTGCTCTCTCTTGTGCCGATGTGTGTATGCATCC GGCTCTATGCTGACACGCGTTGCAGGACCGGGACGTGTACCCGGTGCTAT TCGACATGGGGTGCGGGACGGGGCTGTGCGGGCCGCTCTTCCGGAGCATC GCCGGCAAGATGATCGGCGTCGACCTCAGCCCCAAGATGGTCGAGGTGAG CAGAGCGTTAGAGCTGGCTTTGCAAGTGTTTGCTGGTTTTGCCGCCCCAG TCGCCTATGAGCCATGGCAGCTAGAGCAGGTTTGGCATCGCTGCTGGGAA GTGCCCGTAAATTGAGGCCGATTGGAGTTGGAAGGCACGACTTGATACTT TGTGTATGCTTTATTGCCGCACACAAAAACACGGTGAGGCAATTCCTGAA CTTTGCTCGTCCGCGATTTCTACAGGTGGCGCGTGGCCGGGAGGTGTATG ACGAGCTGGCGGTCGGGGACGTCATCGCGGAGATGGACGCGCGGGCGGCG GGCGGCGAGCGGGCGGACATGATCATCGCCGCCGACGTCCTCGTCTACAT GGGGGCGCTCGACAAGCTCTTTGAGAGTGCCAGCCGCTACTGCAGCGAGA ACGGTAGGTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig742:5991..8601+

>mRNA_P-wetherbeei_contig742.4.1 ID=mRNA_P-wetherbeei_contig742.4.1|Name=mRNA_P-wetherbeei_contig742.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1050bp|location=Sequence derived from alignment at P-wetherbeei_contig742:5991..8601+ (Phaeothamnion wetherbeei SAG_119_79)
ATGACGCGATTGTACAGCCATTTTTTGGTGGGAAATGATCTATACAACGG
TGGCGACCTGGAAGGCGCGGTTGCTGAATATCGGAAAGCCCTGGAGTACG
ATCCCCAACACGCCGACACCCTGTGCAACATGGGGAGCGCGCTGCAGGAT
CTGGGTGACGTGGAGGAGTCATTGGAGCTCTACCTGAGGGCTGTCGACGC
GAATCCGTACCATGCCACGGCCCATTTCAACCTCGCCATCCTCCTTCATG
ACGATGAGCTCGACATTGCCATCGAGCACTACCAGGCGGCAATCGAGGCA
GACCCGACAATGGCGGATGCGTGGGCCAACCTGGGCAGCGCGATGCACCA
CCTGCAGCAGTACAAGGAAGCCGTCACCAGCTACCAAGAGGCCATAGAGC
TGTACGAGGCGGAGGACGGCGGCACAGGCCTCGCCGCACAGCAGTTCCTA
CCGGCGCTGCACTTTCAGCTAGGAACTGCCCTCTCGTCGCTGCCCGACGA
CGCCTGTGCCGGTGGCACGTGCTCGGAGCACGCCGTGGAGCAGCTCCGAA
AGGCGCTGCGGCTCGACCCCGACAACGCCATGGCCCAGCACTCCCTGGGA
GCGCTGCTGGCAGACTCGGAGCTTGCGGGGGCGAGCCCGGAATACGTTAA
GCGGCTCTTCGACGACTATGCCGCCACCTTCGATGAGAGCCTCGCGGGGC
TGAAATACCAGGCCCCTGAACTTTTAAGGGAGGTTGTGAAAGAAGACCGG
GACGTGTACCCGGTGCTATTCGACATGGGGTGCGGGACGGGGCTGTGCGG
GCCGCTCTTCCGGAGCATCGCCGGCAAGATGATCGGCGTCGACCTCAGCC
CCAAGATGGTCGAGGTGGCGCGTGGCCGGGAGGTGTATGACGAGCTGGCG
GTCGGGGACGTCATCGCGGAGATGGACGCGCGGGCGGCGGGCGGCGAGCG
GGCGGACATGATCATCGCCGCCGACGTCCTCGTCTACATGGGGGCGCTCG
ACAAGCTCTTTGAGAGTGCCAGCCGCTACTGCAGCGAGAACGGTAGGTAG
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