mRNA_P-wetherbeei_contig7410.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7410.1.1
Unique NamemRNA_P-wetherbeei_contig7410.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig7410.1.1 vs. uniprot
Match: A0A835Z1X3_9STRA (38 kDa ribosome-associated protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1X3_9STRA)

HSP 1 Score: 338 bits (866), Expect = 5.660e-114
Identity = 166/201 (82.59%), Postives = 181/201 (90.05%), Query Frame = 1 
Query:   61 MSAGSMRVLVIGGTRFSGLYLARELHERGHEVVLYNRGKTATRQLPGENDAAFEKRKADTKTIVGDRQNPDVIKETLGGEKFDAVYDMNAREVSDTKPLADLFLGKLEHYVFMSSAGVYMKSELMPHIEGDAVDPKSRHKGKFESEAYLDEIGMPFTSIRPTYIYGPLNYNPLEEYFFERLDQDRTIIIPAGHGQHLTGLG 663
            MSAG  RVLVIGGTRFSGLYL +ELH RGHEVVLYNRGKTA +QLPGE+D  +EKR  + KTIVGDR++  VI+ETLGGEKFDAVYDMNAREV DT+PLADLF GK+EHYVFMSSAGVY+KS+LMPH E DA DPKSRH GK ESEAYL++IGMPFTSIRPTYIYGPLNYNPLEE+FFERLDQDRTIIIP GHGQHLTGLG
Sbjct:    1 MSAGPQRVLVIGGTRFSGLYLQKELHSRGHEVVLYNRGKTANKQLPGESDEEYEKRCKEVKTIVGDRKDATVIQETLGGEKFDAVYDMNAREVGDTQPLADLFNGKVEHYVFMSSAGVYLKSDLMPHREEDATDPKSRHLGKCESEAYLEKIGMPFTSIRPTYIYGPLNYNPLEEWFFERLDQDRTIIIP-GHGQHLTGLG 200
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BLAST of mRNA_P-wetherbeei_contig7410.1.1 vs. uniprot
Match: A0A6H5JI83_9PHAE (NAD(P)-bd_dom domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JI83_9PHAE)

HSP 1 Score: 330 bits (847), Expect = 1.900e-110
Identity = 158/198 (79.80%), Postives = 177/198 (89.39%), Query Frame = 1 
Query:   70 GSMRVLVIGGTRFSGLYLARELHERGHEVVLYNRGKTATRQLPGENDAAFEKRKADTKTIVGDRQNPDVIKETLGGEKFDAVYDMNAREVSDTKPLADLFLGKLEHYVFMSSAGVYMKSELMPHIEGDAVDPKSRHKGKFESEAYLDEIGMPFTSIRPTYIYGPLNYNPLEEYFFERLDQDRTIIIPAGHGQHLTGLG 663
            G  RVLVIGGTRFSGLYL +ELH RGHEVVLYNRG+TA +QLP E+DA + KR  D KTIVGDR++P+V +  LGGEKFDAV+DMNAREVSDTK +AD+F GK++HYVFMSSAGVY+KSELMPH E DA DPKSRHKGKFESEAYL EIGMP+TSIRPTYIYGPLNYNPLE+YFFERLDQDRT+I+P GHGQHLTGLG
Sbjct:   49 GKQRVLVIGGTRFSGLYLTKELHSRGHEVVLYNRGQTANKQLPCESDAEYAKRMEDVKTIVGDRKDPEVCQSALGGEKFDAVFDMNAREVSDTKAVADVFKGKVDHYVFMSSAGVYLKSELMPHREEDATDPKSRHKGKFESEAYLAEIGMPYTSIRPTYIYGPLNYNPLEQYFFERLDQDRTVIVP-GHGQHLTGLG 245
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BLAST of mRNA_P-wetherbeei_contig7410.1.1 vs. uniprot
Match: A0A7S2XXV9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXV9_9STRA)

HSP 1 Score: 272 bits (695), Expect = 2.200e-87
Identity = 130/201 (64.68%), Postives = 158/201 (78.61%), Query Frame = 1 
Query:   61 MSAGSMRVLVIGGTRFSGLYLARELHERGHEVVLYNRGKTATRQLPGENDAAFEKRKADTKTIVGDRQNPDVIKETLGGEKFDAVYDMNAREVSDTKPLADLFLGKLEHYVFMSSAGVYMKSELMPHIEGDAVDPKSRHKGKFESEAYLDEIGMPFTSIRPTYIYGPLNYNPLEEYFFERLDQDRTIIIPAGHGQHLTGLG 663
            M     R+LVIGGTRFSGLYL +EL +RG++V LYNRGKT  + +PGE++   +KR A TK I GDR N + +   L GE F A+YDMN RE+ DTK LADL+  K+EH+V+MSSAGVY+KSE+MPH+EGDAVDP  RHKGK  +E YL EIG+P+TSIRPTYIYG  NYNPLE+YFFER+DQ RT+I+P G GQHLTGLG
Sbjct:   44 MQMAGERILVIGGTRFSGLYLTKELFDRGYDVTLYNRGKTPIKAIPGESEEDLQKRIAATKIIQGDRTNAEELTSKLSGEDFYAIYDMNGRELDDTKALADLYKDKVEHFVYMSSAGVYLKSEIMPHMEGDAVDPTCRHKGKLHTEEYLAEIGLPYTSIRPTYIYGAGNYNPLEQYFFERIDQGRTLIVP-GPGQHLTGLG 243
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BLAST of mRNA_P-wetherbeei_contig7410.1.1 vs. uniprot
Match: A0A0M0K122_9EUKA (NAD-dependent epimerase dehydratase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K122_9EUKA)

HSP 1 Score: 266 bits (680), Expect = 2.030e-85
Identity = 130/194 (67.01%), Postives = 150/194 (77.32%), Query Frame = 1 
Query:   82 VLVIGGTRFSGLYLARELHERGHEVVLYNRGKTATRQLPGENDAAFEKRKADTKTIVGDRQNPDVIKETLGGEKFDAVYDMNAREVSDTKPLADLFLGKLEHYVFMSSAGVYMKSELMPHIEGDAVDPKSRHKGKFESEAYLDEIGMPFTSIRPTYIYGPLNYNPLEEYFFERLDQDRTIIIPAGHGQHLTGLG 663
            VL++GGTRFSGLYL  ELH RGH V LYNRGKTA +++P E+D AFEKRKA TK + GDR++   +K  LGG KFD VYDM  RE  DT+PL +LF  K+EH+++MSSAGVY KS  MPH E D  DPKSRHKGK E+E  L   G+PFTSIRPTYIYGPLNYNPLEE+FF RLD  + I IP GHGQHLTGLG
Sbjct:   42 VLIVGGTRFSGLYLWEELHNRGHSVTLYNRGKTALKKIPSESDEAFEKRKAATKYVKGDRKDIADMKAKLGGLKFDVVYDMGGREAGDTEPLIELFGNKVEHFIYMSSAGVYKKSLTMPHFEVDPTDPKSRHKGKLETEDLLKAKGVPFTSIRPTYIYGPLNYNPLEEWFFTRLDAGKDICIP-GHGQHLTGLG 234
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BLAST of mRNA_P-wetherbeei_contig7410.1.1 vs. uniprot
Match: A0A0G4GEP5_VITBC (Epimerase domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GEP5_VITBC)

HSP 1 Score: 266 bits (680), Expect = 4.310e-85
Identity = 128/196 (65.31%), Postives = 160/196 (81.63%), Query Frame = 1 
Query:   76 MRVLVIGGTRFSGLYLARELHERGHEVVLYNRGKTATRQLPGENDAAFEKRKADTKTIVGDRQNPDVIKETLGGEKFDAVYDMNAREVSDTKPLADLFLGKLEHYVFMSSAGVYMKSELMPHIEGDAVDPKSRHKGKFESEAYLDEIGMPFTSIRPTYIYGPLNYNPLEEYFFERLDQDRTIIIPAGHGQHLTGLG 663
            M+VL+IGG+RFSGLYL REL +RGH+V ++NRGKTA R +PGE+ + FE+RK+ TK + GDR+N   +++ +   +FDA++DMN REV +TK L DLF  +L+HYV+MSSAGVY+KS+ MPH EGDAVDPK RHKGK +SE YL  I  P+TSIRPTYIYGPLNYNP+EEYFFERL Q+R + IP GHGQHLTGLG
Sbjct:   56 MKVLLIGGSRFSGLYLWRELLDRGHDVTVFNRGKTALRPIPGESASEFERRKSSTKFVTGDRKNLADLRQ-VASMQFDAIFDMNGREVDETKMLVDLFPNRLKHYVYMSSAGVYLKSDEMPHREGDAVDPKCRHKGKLDSEEYLRSINAPWTSIRPTYIYGPLNYNPVEEYFFERLAQNRPVCIP-GHGQHLTGLG 249
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BLAST of mRNA_P-wetherbeei_contig7410.1.1 vs. uniprot
Match: A0A4D9CP52_9STRA (Epimerase domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CP52_9STRA)

HSP 1 Score: 265 bits (676), Expect = 6.210e-85
Identity = 129/226 (57.08%), Postives = 164/226 (72.57%), Query Frame = 1 
Query:    4 ARLQALMLLAFSLGSNAFYMS------AGSMRVLVIGGTRFSGLYLARELHERGHEVVLYNRGKTATRQLPGENDAAFEKRKADTKTIVGDRQNPDVIKETLGGEKFDAVYDMNAREVSDTKPLADLFLGKLEHYVFMSSAGVYMKSELMPHIEGDAVDPKSRHKGKFESEAYLDEIGMPFTSIRPTYIYGPLNYNPLEEYFFERLDQDRTIIIPAGHGQHLTGLG 663
            A + AL LLA   G+  F +           +VL+IGGTRFSGLYL +ELH+RG+++ L+NRGKTA R +PGE+  ++ +R      + GDR NPD +       +FD +YDMN RE +DT+PLAD + G+++H+V+MSSAGVY+KS+LMPH E D VDPKSRHKGKFE+E YL E G+PFTSIRPTYIYGP NYNPLEEYFF R+   R + +P GHGQHLTGLG
Sbjct:    3 AHIHALALLALMAGALGFQIPLTMKAPGAGKKVLIIGGTRFSGLYLFKELHDRGYDITLFNRGKTANRPVPGESAESYAERIGQATFVKGDRTNPDDLAALAKAHEFDIIYDMNGREKTDTQPLADAYNGRVDHFVYMSSAGVYLKSDLMPHKETDPVDPKSRHKGKFETETYLAEKGLPFTSIRPTYIYGPQNYNPLEEYFFHRVVAGRAVAVP-GHGQHLTGLG 227
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BLAST of mRNA_P-wetherbeei_contig7410.1.1 vs. uniprot
Match: A0A0G4HZ55_9ALVE (Epimerase domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HZ55_9ALVE)

HSP 1 Score: 263 bits (671), Expect = 6.480e-84
Identity = 126/194 (64.95%), Postives = 155/194 (79.90%), Query Frame = 1 
Query:   82 VLVIGGTRFSGLYLARELHERGHEVVLYNRGKTATRQLPGENDAAFEKRKADTKTIVGDRQNPDVIKETLGGEKFDAVYDMNAREVSDTKPLADLFLGKLEHYVFMSSAGVYMKSELMPHIEGDAVDPKSRHKGKFESEAYLDEIGMPFTSIRPTYIYGPLNYNPLEEYFFERLDQDRTIIIPAGHGQHLTGLG 663
            VL+IGGTRFSGLY+ +EL +RGH+V L+NRGKTA +Q+PGE D  FE RK+ T  + GDRQ+P+ + + L    F+ VYDMN RE SDT+PLAD+F GKLEH+V+MSSAGVY+KS+ MPH EGDA DPK RHKGK ++E YL E G+PFTS RPTYI GPLNYNP+EE FFER+D  R + +P GHG+HLTGLG
Sbjct:   53 VLLIGGTRFSGLYVWQELVKRGHKVTLFNRGKTALKQIPGETDEEFEHRKSSTTFVTGDRQDPESLAQ-LKDMDFNVVYDMNGRERSDTQPLADMFKGKLEHFVYMSSAGVYLKSDSMPHREGDATDPKCRHKGKLDTEQYLVESGVPFTSFRPTYICGPLNYNPVEEMFFERIDAGRPVCVP-GHGEHLTGLG 244
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BLAST of mRNA_P-wetherbeei_contig7410.1.1 vs. uniprot
Match: A0A7S1TDX6_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TDX6_9RHOD)

HSP 1 Score: 258 bits (659), Expect = 2.680e-82
Identity = 128/209 (61.24%), Postives = 158/209 (75.60%), Query Frame = 1 
Query:   43 GSNAFYMSAGSMRVLVIGGTRFSGLYLARELHERGHEVVLYNRGKTAT--RQLPGENDAAFEKRKADTKTIVGDRQNPDVIKETLGGEKFDAVYDMNAREVSDTKPLADLFLGKLEHYVFMSSAGVYMKSELMPHIEGDAVDPKSRHKGKFESEAYLDEIGMPFTSIRPTYIYGPLNYNPLEEYFFERLDQDRTIIIPAGHGQHLTGLG 663
            GS    ++    RVL+IGGTRFSG YLA+EL + GH++VL+NR KTA   R+LPGE + AF   +    TI GDRQN + +   L GE FD VYD   RE++D+KPL DLF G++E YV+MSSAGVY+KS++MPH EGDA+DPKSRHKGKFE+E YL   G+P+T+IRPTYIYG LNYNPLEE+FFER+D  R + IP GHG HLTGLG
Sbjct:   22 GSVRMSLAVPPKRVLLIGGTRFSGAYLAKELVDAGHDLVLFNRSKTAEGRRKLPGETEEAFLATRGQVSTIEGDRQNIEDMIAKLKGEHFDVVYDNTGRELADSKPLIDLFKGRIEQYVYMSSAGVYLKSDVMPHREGDALDPKSRHKGKFETEQYLQSEGIPYTAIRPTYIYGALNYNPLEEWFFERIDAGRPVPIP-GHGMHLTGLG 229
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BLAST of mRNA_P-wetherbeei_contig7410.1.1 vs. uniprot
Match: M1UQF3_CYAM1 (Similar to mRNA binding protein CSP41 n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1UQF3_CYAM1)

HSP 1 Score: 258 bits (658), Expect = 1.860e-81
Identity = 120/198 (60.61%), Postives = 154/198 (77.78%), Query Frame = 1 
Query:   70 GSMRVLVIGGTRFSGLYLARELHERGHEVVLYNRGKTATRQLPGENDAAFEKRKADTKTIVGDRQNPDVIKETLGGEKFDAVYDMNAREVSDTKPLADLFLGKLEHYVFMSSAGVYMKSELMPHIEGDAVDPKSRHKGKFESEAYLDEIGMPFTSIRPTYIYGPLNYNPLEEYFFERLDQDRTIIIPAGHGQHLTGLG 663
            GS R LVIGGTRFSG+YLA+ L + GHEVVLYNRG    +++P E +  F  R A + TI+GDR  PD +KE L  E FDA++DMN RE+ DT+P A+LF GK++HYV+MSSAGVY++S ++PHIEGDA DPKSRH GK ++E +LD  G+P+T+IRPTYIYGP NYNP+EE+FF R+ +DR I IP G G ++TGLG
Sbjct:   87 GSKRCLVIGGTRFSGVYLAKVLGDLGHEVVLYNRGSKPLQRVPNEPEGEFAARAAMSSTIIGDRTKPDEVKEKLASENFDAIFDMNGRELEDTRPFAELFAGKIDHYVYMSSAGVYLQSPVLPHIEGDACDPKSRHLGKLQTEEFLDSHGLPWTAIRPTYIYGPSNYNPIEEWFFARIAEDRPIPIP-GDGTYMTGLG 283
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BLAST of mRNA_P-wetherbeei_contig7410.1.1 vs. uniprot
Match: A0A5J4YKX7_PORPP (Chloroplast stem-loop binding protein of 41 kDa b, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YKX7_PORPP)

HSP 1 Score: 249 bits (637), Expect = 9.320e-79
Identity = 125/206 (60.68%), Postives = 155/206 (75.24%), Query Frame = 1 
Query:   61 MSAGSM-RVLVIGGTRFSGLYLARELHERGHEVVLYNRGKTA----TRQLPGENDAAFEKRKADTKTIVGDRQNPDVIKETLGGEKFDAVYDMNAREVSDTKPLADLFLGKLEHYVFMSSAGVYMKSELMPHIEGDAVDPKSRHKGKFESEAYLDEIGMPFTSIRPTYIYGPLNYNPLEEYFFERLDQDRTIIIPAGHGQHLTGLG 663
            M+AG   RVLVIGGTRFSGLYL + L + GHEVVL+NRG       +  +PGE  A FE R  +T  IVGDR +   + E L GE FDA++D N RE++D+KPL DLF GK+E Y++MSSAGVY KS++MPH+E DAVD KSRHKGK ++E +L + GMP+T+IRPTYIYG LNYNPLE++FFERL   R + +P GHGQHLTGLG
Sbjct:   39 MAAGDKKRVLVIGGTRFSGLYLTKVLADAGHEVVLFNRGSKPVGDKSLMVPGETQAQFEARNKNTSVIVGDRTDAAQMTELLKGETFDAIFDNNGRELADSKPLIDLFNGKIEQYIYMSSAGVYAKSDIMPHLETDAVDLKSRHKGKLDTETFLKQSGMPYTAIRPTYIYGALNYNPLEQWFFERLAAGRPVPVP-GHGQHLTGLG 243
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7410.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z1X3_9STRA5.660e-11482.5938 kDa ribosome-associated protein n=1 Tax=Tribone... [more]
A0A6H5JI83_9PHAE1.900e-11079.80NAD(P)-bd_dom domain-containing protein n=2 Tax=Ec... [more]
A0A7S2XXV9_9STRA2.200e-8764.68Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A0M0K122_9EUKA2.030e-8567.01NAD-dependent epimerase dehydratase n=1 Tax=Chryso... [more]
A0A0G4GEP5_VITBC4.310e-8565.31Epimerase domain-containing protein n=1 Tax=Vitrel... [more]
A0A4D9CP52_9STRA6.210e-8557.08Epimerase domain-containing protein n=3 Tax=Monodo... [more]
A0A0G4HZ55_9ALVE6.480e-8464.95Epimerase domain-containing protein n=1 Tax=Chrome... [more]
A0A7S1TDX6_9RHOD2.680e-8261.24Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
M1UQF3_CYAM11.860e-8160.61Similar to mRNA binding protein CSP41 n=1 Tax=Cyan... [more]
A0A5J4YKX7_PORPP9.320e-7960.68Chloroplast stem-loop binding protein of 41 kDa b,... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7410contigP-wetherbeei_contig7410:1590..3092 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LDG3
PFAMsEpimerase
Model size663
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorysignal peptide
GOsGO:0000427,GO:0000428,GO:0001101,GO:0001871,GO:0003674,GO:0003676,GO:0003677,GO:0003723,GO:0005488,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005777,GO:0005840,GO:0005911,GO:0005975,GO:0005996,GO:0006139,GO:0006355,GO:0006364,GO:0006396,GO:0006412,GO:0006417,GO:0006518,GO:0006725,GO:0006807,GO:0006950,GO:0006952,GO:0006996,GO:0007154,GO:0007623,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009266,GO:0009409,GO:0009414,GO:0009415,GO:0009506,GO:0009507,GO:0009526,GO:0009532,GO:0009536,GO:0009570,GO:0009605,GO:0009607,GO:0009611,GO:0009617,GO:0009628,GO:0009657,GO:0009658,GO:0009889,GO:0009891,GO:0009893,GO:0009941,GO:0009987,GO:0009991,GO:0010035,GO:0010287,GO:0010297,GO:0010319,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0016020,GO:0016043,GO:0016070,GO:0016072,GO:0019219,GO:0019222,GO:0019538,GO:0022613,GO:0030054,GO:0030246,GO:0030247,GO:0030880,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031668,GO:0031967,GO:0031975,GO:0032268,GO:0032270,GO:0032544,GO:0032991,GO:0033554,GO:0034248,GO:0034250,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042221,GO:0042254,GO:0042579,GO:0042631,GO:0042742,GO:0043043,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045893,GO:0045935,GO:0046483,GO:0048046,GO:0048511,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0051252,GO:0051254,GO:0051704,GO:0051707,GO:0051716,GO:0055044,GO:0060255,GO:0061695,GO:0065007,GO:0070887,GO:0071214,GO:0071229,GO:0071462,GO:0071496,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0098542,GO:0104004,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901700,GO:1901701,GO:1902494,GO:1902680,GO:1903506,GO:1903508,GO:1990234,GO:1990904,GO:2000112,GO:2001141
Exons3
Evalue1.91e-112
EggNOG OGs2CMCJ@1|root,2QPZ0@2759|Eukaryota
Ec32 ortholog description38 kDa ribosome-associated protein precursor
Ec32 orthologEc-15_000730.1
DescriptionNAD dependent epimerase/dehydratase family
Cds size663
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186979.6553495-CDS-P-wetherbeei_contig7410:1589..20361683186979.6553495-CDS-P-wetherbeei_contig7410:1589..2036Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7410 1590..2036 +
1683186979.6680229-CDS-P-wetherbeei_contig7410:2305..24891683186979.6680229-CDS-P-wetherbeei_contig7410:2305..2489Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7410 2306..2489 +
1683186979.6776366-CDS-P-wetherbeei_contig7410:3060..30921683186979.6776366-CDS-P-wetherbeei_contig7410:3060..3092Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7410 3061..3092 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7410.1.1prot_P-wetherbeei_contig7410.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7410 1590..3092 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7410.1.1

>prot_P-wetherbeei_contig7410.1.1 ID=prot_P-wetherbeei_contig7410.1.1|Name=mRNA_P-wetherbeei_contig7410.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=221bp
MARLQALMLLAFSLGSNAFYMSAGSMRVLVIGGTRFSGLYLARELHERGH
EVVLYNRGKTATRQLPGENDAAFEKRKADTKTIVGDRQNPDVIKETLGGE
KFDAVYDMNAREVSDTKPLADLFLGKLEHYVFMSSAGVYMKSELMPHIEG
DAVDPKSRHKGKFESEAYLDEIGMPFTSIRPTYIYGPLNYNPLEEYFFER
LDQDRTIIIPAGHGQHLTGLG
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mRNA from alignment at P-wetherbeei_contig7410:1590..3092+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7410.1.1 ID=mRNA_P-wetherbeei_contig7410.1.1|Name=mRNA_P-wetherbeei_contig7410.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1503bp|location=Sequence derived from alignment at P-wetherbeei_contig7410:1590..3092+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCGCGGCTCCAGGCGTTAATGCTCCTTGCTTTCTCATTGGGAAGCAA
TGCTTTCTACATGTCGGCCGGCTCGATGCGGGTCCTCGTTATAGGCGGGA
CGAGGTTTAGCGGGCTTTACCTTGCACGCGAGCTGCACGAACGAGGCCAC
GAGGTCGTCTTGTACAACCGCGGCAAGACGGCGACCAGGCAACTTCCCGG
GGAGAACGACGCGGCCTTCGAGAAGCGCAAGGCGGACACCAAGACGATTG
TGGGCGATCGCCAAAACCCCGACGTCATCAAGGAAACCTTGGGCGGGGAG
AAGTTTGACGCCGTTTACGACATGAACGCGCGGGAAGTCAGCGATACGAA
GCCCTTGGCGGATCTCTTTCTCGGAAAGCTAGAGCACTACGTTTTCATGT
CATCGGCGGGAGTCTACATGAAGTCGGAGCTCATGCCCCACATCGAGGTG
TGTCTCGTAGAATGAATTAATTTTCACTCACCCCGTTTGAGAAAAATGGT
AGACATATGTCTTGAGGAAGAGTATTTACGCTTTGCAGAGAAGTCTTTAA
TCTTTCCTTTTCTGTACTCTTTTTCCATATGTCCTCGACGATACGTAGCC
TCTCTTTCTCTCTTTCTTCACAACTCGTTGCCAACCTTCATATCCATATC
CCTGCATTTCGCTCTCGTCTCCAAACAAACCCTTAAATAAATCCCGAAAC
AATAAATGTAATGCAGGGCGACGCTGTGGACCCCAAGTCGCGGCACAAGG
GCAAGTTCGAGTCGGAGGCGTACCTGGACGAGATCGGCATGCCCTTCACG
TCGATCCGGCCGACGTATATTTACGGGCCGCTCAACTACAACCCACTCGA
GGAGTACTTCTTCGAGCGGCTCGACCAGGACCGTACCATCATCATTCCAG
GTCTGTCGCACGTCTTTTGTCTTAATGGCCTTTCTTTATCCGAAGTGTAA
ACCATTCGTTGCCTCCTCTTTGTTATTTTCGGCCCCATTCTTCTGAGGAT
GCGAGTTGTGGGATTCGGGTGTGCTGCAGTTGCGGCGGCTCGTGATGCCT
TGGTAGCAGCGGATCCTTCAGCAACTAACAGGTGTTCAACAGTCATACCA
AGGCCACGGAGAAGCGTTCTGTTGCGGAACGGCGGCGTTTTTCAATCCGT
CGAAGCACGGAACATGAGTATTTGAAAGAAGCAAAAGGAAATGGCATCGT
AACCAACTTTTTGTTCTACCTGCTGCCCGTCTCACTTCCCCCCATCGATG
ATGGCTGCGATGACGGCTGCGACGACGGCTGCGATGACGGCGATGGCTGC
GACGCCGGCGGCGGCTGCTGCGACGGCGATGGGTGGCGATGATAACCGCG
TCGGCTGCAATGGCTTGCGGTTGCGGCTGCAACGACTTTGGCGGCTGCTG
GGACGGGCGGCGGCTATGCCTTTTGGCTTTTGGCTCCGGAAACCGCTGCC
TGCCGGTGCCGCCGGACCGAGCAGGGCACGGGCAGCACCTGACAGGGCTG
GGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig7410:1590..3092+

>mRNA_P-wetherbeei_contig7410.1.1 ID=mRNA_P-wetherbeei_contig7410.1.1|Name=mRNA_P-wetherbeei_contig7410.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=663bp|location=Sequence derived from alignment at P-wetherbeei_contig7410:1590..3092+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCGCGGCTCCAGGCGTTAATGCTCCTTGCTTTCTCATTGGGAAGCAA
TGCTTTCTACATGTCGGCCGGCTCGATGCGGGTCCTCGTTATAGGCGGGA
CGAGGTTTAGCGGGCTTTACCTTGCACGCGAGCTGCACGAACGAGGCCAC
GAGGTCGTCTTGTACAACCGCGGCAAGACGGCGACCAGGCAACTTCCCGG
GGAGAACGACGCGGCCTTCGAGAAGCGCAAGGCGGACACCAAGACGATTG
TGGGCGATCGCCAAAACCCCGACGTCATCAAGGAAACCTTGGGCGGGGAG
AAGTTTGACGCCGTTTACGACATGAACGCGCGGGAAGTCAGCGATACGAA
GCCCTTGGCGGATCTCTTTCTCGGAAAGCTAGAGCACTACGTTTTCATGT
CATCGGCGGGAGTCTACATGAAGTCGGAGCTCATGCCCCACATCGAGGGC
GACGCTGTGGACCCCAAGTCGCGGCACAAGGGCAAGTTCGAGTCGGAGGC
GTACCTGGACGAGATCGGCATGCCCTTCACGTCGATCCGGCCGACGTATA
TTTACGGGCCGCTCAACTACAACCCACTCGAGGAGTACTTCTTCGAGCGG
CTCGACCAGGACCGTACCATCATCATTCCAGCAGGGCACGGGCAGCACCT
GACAGGGCTGGGC
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