mRNA_P-wetherbeei_contig738.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig738.1.1
Unique NamemRNA_P-wetherbeei_contig738.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig738.1.1 vs. uniprot
Match: A0A835YVT4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVT4_9STRA)

HSP 1 Score: 360 bits (925), Expect = 9.880e-121
Identity = 187/259 (72.20%), Postives = 209/259 (80.69%), Query Frame = 1
Query:    1 MQVLVRKLDGRHLCLTAELGDDVAHLRALVEERTGIPAALARLVWCGRDLQDGVRLHDCDGLGDGSVVGIELRLVGGMDFQNRVGSKFGGGGVMSESQANADRRERLRKLALETIDLNKDPYFMRNHLGKYECKLCLTLHNNEGNYLAHTQGKRHQENLARRAAMEARNAPIKPQPVAQVHTRSVIKIGRPGYKVTKSRDPQTQQRSLVFDVDYPEADDGVQPRHRFMSAYEQRVEAPDKRYQYILFACDPYETIAFKV 777
            M++  + LD R + L      D+   RA +EE TGIPA+L RL    RDL     L    G+ DGS + + LRL GGMD QNR GSKFGGGGVMSESQAN DRRERLRKLALETIDLNKDPYFM+NHLGKYECKLCLTLHNNEGNYLAHTQGKRHQ NLARRAAMEA+NA IKP P+  V TR+VIKIGRPGYKVTKSRD  T+QRSL+F+VDYPEADDGVQPRHRFMS+YEQ+VEAP   YQY+LFAC+PYET+AFKV
Sbjct:    1 MRLFCKGLDSRIIALDVP-SSDMREARACLEESTGIPASLQRLSDGRRDLPGEGCLQSL-GVSDGSTLHLCLRLRGGMDMQNRAGSKFGGGGVMSESQANIDRRERLRKLALETIDLNKDPYFMKNHLGKYECKLCLTLHNNEGNYLAHTQGKRHQTNLARRAAMEAKNAVIKPAPITVVQTRNVIKIGRPGYKVTKSRDVHTRQRSLLFEVDYPEADDGVQPRHRFMSSYEQKVEAPSNDYQYLLFACEPYETVAFKV 257          
BLAST of mRNA_P-wetherbeei_contig738.1.1 vs. uniprot
Match: D8LTA0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTA0_ECTSI)

HSP 1 Score: 353 bits (905), Expect = 3.220e-118
Identity = 181/261 (69.35%), Postives = 205/261 (78.54%), Query Frame = 1
Query:    1 MQVLVRKLDGRHLCLTAELGDD--VAHLRALVEERTGIPAALARLVWCGRDLQDGVRLHDCDGLGDGSVVGIELRLVGGMDFQNRVGSKFGGGGVMSESQANADRRERLRKLALETIDLNKDPYFMRNHLGKYECKLCLTLHNNEGNYLAHTQGKRHQENLARRAAMEARNAPIKPQPVAQVHTRSVIKIGRPGYKVTKSRDPQTQQRSLVFDVDYPEADDGVQPRHRFMSAYEQRVEAPDKRYQYILFACDPYETIAFKV 777
            MQ+ V+ L G H  +      D  V+ LR+ VE  +G+P  L RL    RDL       D  G+  G  V + LRL+GG+DFQ+R GSKFGGGGVMSE QA  DRRERLRKLA ET+DLNKDPYFMRNHLGKYECKLCLTLHNNEGNYLAHTQGKRHQ+NLARRAAMEA+NA +KPQP   V TR+VIKIGRPGYKVTK+RD  + QRSL+F+VDYPEA+DG QPRHRFMSAYEQ+VEAPDK YQY+LFACDPYETI FKV
Sbjct:    1 MQIFVQGLGGGHFAVDVSSLRDYRVSTLRSAVEGLSGVPPHLQRLTSGARDLASPSASLDDYGIEHGCTVRLSLRLLGGIDFQHREGSKFGGGGVMSEGQAAVDRRERLRKLAQETVDLNKDPYFMRNHLGKYECKLCLTLHNNEGNYLAHTQGKRHQQNLARRAAMEAKNALVKPQPAITVQTRNVIKIGRPGYKVTKARDLSSNQRSLLFEVDYPEAEDGAQPRHRFMSAYEQKVEAPDKGYQYLLFACDPYETIGFKV 261          
BLAST of mRNA_P-wetherbeei_contig738.1.1 vs. uniprot
Match: A0A7S2B1N4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B1N4_9STRA)

HSP 1 Score: 320 bits (819), Expect = 3.040e-105
Identity = 166/237 (70.04%), Postives = 189/237 (79.75%), Query Frame = 1
Query:   76 LRALVEERTGIPAALARLVWCGRDLQDGVRLHDCDGLGDGSVVGIELRLVGGMDFQNRVGSKFGGGGVMSESQANADRRERLRKLALETIDLNKDPYFMRNHLGKYECKLCLTLHNNEGNYLAHTQGKRHQENLARRAAMEAR-NAPIKPQPV--AQVHTRSVIKIGRPGYKVTKSRDPQTQQRSLVFDVDYPEADDGVQPRHRFMSAYEQRVEAPDKRYQYILFACDPYETIAFKV 777
            LR  + ER GIPA    L+  GR L +  R  +   LG GS + I LR+ GG+DFQ+R GSKFGGGGVMSE+QANADRRERLRKLALETIDL KDPYF++NHLG +ECKLCLTLHN EGNYLAHTQGKRHQ+NLARRAA E +     KP     A    RS IKIGRPGYKVTKSRD  T+QRSL+F+VDYPEA++GVQPRHRFMSAYEQRVEAPDK YQY+LFAC+PYET+AFK+
Sbjct:    2 LREALSEREGIPACEMCLMANGRQLSEDFRRVEDYSLGHGSTISILLRVRGGIDFQHREGSKFGGGGVMSETQANADRRERLRKLALETIDLEKDPYFLKNHLGTFECKLCLTLHNTEGNYLAHTQGKRHQQNLARRAAREEQLGLAAKPNTAKAALAAGRSSIKIGRPGYKVTKSRDAATKQRSLLFEVDYPEAEEGVQPRHRFMSAYEQRVEAPDKNYQYLLFACEPYETVAFKI 238          
BLAST of mRNA_P-wetherbeei_contig738.1.1 vs. uniprot
Match: A0A6H5JLB9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLB9_9PHAE)

HSP 1 Score: 303 bits (777), Expect = 9.120e-100
Identity = 161/245 (65.71%), Postives = 185/245 (75.51%), Query Frame = 1
Query:    1 MQVLVRKLDGRHLCLTAELGDD--VAHLRALVEERTGIPAALARLVWCGRDLQDGVRLHDCDGLGDGSVVGIELRLVGGMDFQNRVGSKFGGGGVMSESQANADRRERLRKLALETIDLNKDPYFMRNHLGKYECKLCLTLHNNEGNYLAHTQGKRHQENLARRAAMEARNAPIKPQPVAQVHTRSVIKIGRPGYKVTKSRDPQTQQRSLVFDVDYPEADDGVQPRHRFMSAYEQRVEAPDKRYQ 729
            MQ+ V+ L G H  +      D  V+ LR+ VE  +G+P+ L RL    +DL       D  G+  G  V + LRL+GG+DFQ+R GSKFGGGGVMSE QA  DRRERLRKLA ET+DLNKDPYFMRNHLGKYECKLCLTLHNNEGNYLAHTQGKRHQ+NLARRAAMEA+NA           TR+VIKIGRPGYKVTK+RD  + QRSL+F+VDYPEA+DG QPRHRFMSAYEQ+VEAPDK YQ
Sbjct:    1 MQIFVQGLGGGHFAVDVSSLRDYRVSTLRSAVEGLSGVPSHLQRLTSGAKDLASPSASLDDYGIEHGCTVRLSLRLLGGIDFQHREGSKFGGGGVMSEGQAAVDRRERLRKLAQETVDLNKDPYFMRNHLGKYECKLCLTLHNNEGNYLAHTQGKRHQQNLARRAAMEAKNA----------LTRNVIKIGRPGYKVTKARDLSSNQRSLLFEVDYPEAEDGAQPRHRFMSAYEQKVEAPDKGYQ 235          
BLAST of mRNA_P-wetherbeei_contig738.1.1 vs. uniprot
Match: A0A7S3XZJ6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZJ6_HETAK)

HSP 1 Score: 305 bits (780), Expect = 4.280e-99
Identity = 163/263 (61.98%), Postives = 192/263 (73.00%), Query Frame = 1
Query:    1 MQVLVRKLDGRHLCLTAELGDDVAHLRALVEERTGIPAALARLVWCGRDL--QDGVRLHDCDGLGDGSVVGIELR--LVGGMDFQNRVGSKFGGGGVMSESQANADRRERLRKLALETIDLNKDPYFMRNHLGKYECKLCLTLHNNEGNYLAHTQGKRHQENLARRAAMEARNAPIKPQPVAQVHTRSVIKIGRPGYKVTKSRDPQTQQRSLVFDVDYPEADDGVQPRHRFMSAYEQRVEAPDKRYQYILFACDPYETIAFKV 777
            MQ+ +R L+G       E G+ V    + V    GI      L   GR +  +D   +    GLG GS + +  R  L GG+DFQ+R G KFGGGG MS      +RRERLRKLA+ET+DL KDPYFMRNHLG YECKLCLTLHNNEGNYLAHTQGKRHQ+NLARRAA+EAR+APIKPQ    V TR  IKIGRPGYKVTKSRD +T+QRSL+F+VD PE ++G QPRHRFMSAYEQ+VEAPDK YQY+L AC+PYET+AFK+
Sbjct:   17 MQIFLRGLNGISRVWNVEDGESVRRFCSRVALEEGISDGDVILASSGRLILGKDDTPISAL-GLGFGSALSLFPRGGLKGGIDFQHREGIKFGGGGAMSSQNEAIERRERLRKLAMETLDLAKDPYFMRNHLGTYECKLCLTLHNNEGNYLAHTQGKRHQQNLARRAALEARDAPIKPQAARVVPTRRTIKIGRPGYKVTKSRDVETKQRSLLFEVDCPEVEEGAQPRHRFMSAYEQKVEAPDKAYQYLLVACEPYETVAFKI 278          
BLAST of mRNA_P-wetherbeei_contig738.1.1 vs. uniprot
Match: A0A4D9D479_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D479_9STRA)

HSP 1 Score: 306 bits (784), Expect = 5.390e-98
Identity = 156/226 (69.03%), Postives = 182/226 (80.53%), Query Frame = 1
Query:  103 GIPAALARLVWCGRDLQDGVRLHDCDGLGDGSVVGIELRLVGGMDFQNRVGSKFGGGGVMSESQANADRRERLRKLALETIDLNKDPYFMRNHLGKYECKLCLTLHNNEGNYLAHTQGKRHQENLARRAAMEARNAPIKPQPVAQVHTRSVIKIGRPGYKVTKSRDPQTQQRSLVFDVDYPEADDGVQPRHRFMSAYEQRVEAPDKR-YQYILFACDPYETIAFKV 777
            GIPAAL RL   GR L+D   L DC  +     + + L L GG+DFQ+R GS+FGGGG MSES ANADRRERLRKLALETIDLNKDPYFMRNHLG YECKLCLTLHNNEGNYLAHTQGKRHQENLARRAA EA+    +P     V  R ++KIGRPGYKVTK+RD  T+QRSL+F++DYP+A++ VQPRHRFMSA+EQRVE+  +R +QY+LFAC+PYETI FK+
Sbjct:   85 GIPAALQRLTLGGRHLRDDQTLADCV-INGCETLHLVLPLPGGIDFQHRDGSRFGGGGQMSESLANADRRERLRKLALETIDLNKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQENLARRAAREAKEQQYRPNKPTMVAARRMMKIGRPGYKVTKARDLSTRQRSLIFEIDYPQAEEDVQPRHRFMSAFEQRVESTKEREWQYLLFACEPYETIGFKI 309          
BLAST of mRNA_P-wetherbeei_contig738.1.1 vs. uniprot
Match: A0A1W0A306_9STRA (Splicing factor 3A subunit n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A306_9STRA)

HSP 1 Score: 294 bits (752), Expect = 4.050e-95
Identity = 154/261 (59.00%), Postives = 185/261 (70.88%), Query Frame = 1
Query:    1 MQVLVRKLDGRHLCLTAELGDDVAHLRALVEERTGIPAALARLVWCGRDLQDGVRLHDCDGLGDGSVVGIELRLVGGMDFQNRVGSKFGGGGVMSESQANADRRERLRKLALETIDLNKDPYFMRNHLGKYECKLCLTLHNNEGNYLAHTQGKRHQENLARRAAMEARNAPIKPQPVAQVHTRSV--IKIGRPGYKVTKSRDPQTQQRSLVFDVDYPEADDGVQPRHRFMSAYEQRVEAPDKRYQYILFACDPYETIAFKV 777
            M V VR +  + + +  +  D V  L+  V +  GIPA+L  L +    L D   L D  G+  GS +   + L GGMDFQNRVG+KFGGGGVMSE QAN DRRERLRKLALET+DL+KDPY ++NHLG +ECKLCLTLH+NEGNYLAHTQGKRHQ NLARRAA +A  A     P  ++    +  IKIG PGYKVTK RDP T  R L+F + YP+  DG QPRHRFMSA+EQRVE  DK +QY+LFAC+PYETIAFK+
Sbjct:    1 MDVFVRGIGSKEIHVIVQETDSVNGLKYQVSKLMGIPASLFNLAFNAHQLIDANYLSDY-GIVHGSTLNALMSLKGGMDFQNRVGTKFGGGGVMSEQQANIDRRERLRKLALETVDLSKDPYILKNHLGTFECKLCLTLHSNEGNYLAHTQGKRHQTNLARRAAKDAAEASASVPPPQKLDVPKIRTIKIGLPGYKVTKQRDPDTGARMLLFQIFYPDIMDGYQPRHRFMSAFEQRVEVADKNFQYLLFACEPYETIAFKI 260          
BLAST of mRNA_P-wetherbeei_contig738.1.1 vs. uniprot
Match: A0A067CHK6_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CHK6_SAPPC)

HSP 1 Score: 292 bits (747), Expect = 3.420e-94
Identity = 155/262 (59.16%), Postives = 187/262 (71.37%), Query Frame = 1
Query:    1 MQVLVRKLDGRHLCLTAELGDDVAHLRALVEERTGIPAALARLVWCGRDLQDGVRLHD-CDGLGDGSVVGIELRLVGGMDFQNRVGSKFGGGGVMSESQANADRRERLRKLALETIDLNKDPYFMRNHLGKYECKLCLTLHNNEGNYLAHTQGKRHQENLARRAAMEARNAPIKPQ--PVAQVHTRSVIKIGRPGYKVTKSRDPQTQQRSLVFDVDYPEADDGVQPRHRFMSAYEQRVEAPDKRYQYILFACDPYETIAFKV 777
            M + VR L  + L + A+  D +A ++A V    G+P AL +L +  R L +   +HD C  +  GS +   + L GGMDFQNRVGSK G GGV SE QAN DRRERLRKLALET+DL+KDPY ++NHLG +ECKLCLTLH+NEGNYLAHTQGKRHQ NLARRAA +A  A    Q  P  ++     IKIG PGYKVTK RDP T  R L+F + YP+  DG+QPRHRFMSA+EQRVE  DK +QY+LFAC+PYETIAFKV
Sbjct:    1 MDLFVRGLGPKELHVVAQATDSIAAVKAHVSGLMGVPVALFKLSFNARLLVETNFVHDYC--ITHGSTLAASMALKGGMDFQNRVGSKPGSGGVASEQQANIDRRERLRKLALETVDLSKDPYILKNHLGTFECKLCLTLHSNEGNYLAHTQGKRHQTNLARRAAKDAAEASANVQAPPKPEIQRIRTIKIGLPGYKVTKQRDPDTGARMLLFQIFYPDVMDGLQPRHRFMSAFEQRVEVADKNFQYLLFACEPYETIAFKV 260          
BLAST of mRNA_P-wetherbeei_contig738.1.1 vs. uniprot
Match: F0YC33_AURAN (Matrin-type domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YC33_AURAN)

HSP 1 Score: 287 bits (735), Expect = 2.170e-93
Identity = 140/179 (78.21%), Postives = 150/179 (83.80%), Query Frame = 1
Query:  241 QNRVGSKFGGGGVMSESQANADRRERLRKLALETIDLNKDPYFMRNHLGKYECKLCLTLHNNEGNYLAHTQGKRHQENLARRAAMEARNAPIKPQPVAQVHTRSVIKIGRPGYKVTKSRDPQTQQRSLVFDVDYPEADDGVQPRHRFMSAYEQRVEAPDKRYQYILFACDPYETIAFKV 777
            Q+RV S+ GGGGV S  QAN DRRERLRKLALET+DLNKDPYFMRNHLG YECKLCLTLHN EGNYLAHTQGKRHQ+NLARRA  EAR+API P     V  R  IKIGRPGYKVTKSRD  T QR L+F+VDYPEADD  QPRHRFMSAYEQRVE PDK YQY+LFAC+PYETI FK+
Sbjct:    4 QDRVNSRHGGGGVQSSEQANVDRRERLRKLALETVDLNKDPYFMRNHLGTYECKLCLTLHNTEGNYLAHTQGKRHQQNLARRAFKEARDAPIAPAATRYVEKRHTIKIGRPGYKVTKSRDAATSQRCLLFEVDYPEADDASQPRHRFMSAYEQRVEPPDKAYQYLLFACEPYETIGFKI 182          
BLAST of mRNA_P-wetherbeei_contig738.1.1 vs. uniprot
Match: A0A7S3ZZ98_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZZ98_9STRA)

HSP 1 Score: 286 bits (731), Expect = 9.350e-93
Identity = 139/179 (77.65%), Postives = 152/179 (84.92%), Query Frame = 1
Query:  241 QNRVGSKFGGGGVMSESQANADRRERLRKLALETIDLNKDPYFMRNHLGKYECKLCLTLHNNEGNYLAHTQGKRHQENLARRAAMEARNAPIKPQPVAQVHTRSVIKIGRPGYKVTKSRDPQTQQRSLVFDVDYPEADDGVQPRHRFMSAYEQRVEAPDKRYQYILFACDPYETIAFKV 777
            Q+RV SK GGGG+ S  QAN DRRERLRKLALET+DLNKDPYFM+NHLG YECKLCLTLHN EGNYLAHTQGKRHQ+NLARRA  +AR+API P P   V  R  IKIGRPGYKVTKSRD  + QR+L+F+VDYPEAD  VQPRHRFMSAYEQRVE PDK YQY+LFAC+PYETI FKV
Sbjct:    4 QDRVNSKHGGGGLQSSEQANLDRRERLRKLALETVDLNKDPYFMKNHLGSYECKLCLTLHNTEGNYLAHTQGKRHQQNLARRAFKDARDAPILPTPAKYVEKRHAIKIGRPGYKVTKSRDASSGQRALLFEVDYPEADATVQPRHRFMSAYEQRVEPPDKNYQYLLFACEPYETIGFKV 182          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig738.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YVT4_9STRA9.880e-12172.20Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LTA0_ECTSI3.220e-11869.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2B1N4_9STRA3.040e-10570.04Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A6H5JLB9_9PHAE9.120e-10065.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3XZJ6_HETAK4.280e-9961.98Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A4D9D479_9STRA5.390e-9869.03Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A1W0A306_9STRA4.050e-9559.00Splicing factor 3A subunit n=1 Tax=Thraustotheca c... [more]
A0A067CHK6_SAPPC3.420e-9459.16Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
F0YC33_AURAN2.170e-9378.21Matrin-type domain-containing protein n=1 Tax=Aure... [more]
A0A7S3ZZ98_9STRA9.350e-9377.65Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig738contigP-wetherbeei_contig738:45..1792 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LTA0
Preferred namesap62
PFAMsSF3A2,zf-met
Model size1068
Max annot lvl2759|Eukaryota
KEGG koko:K12826
KEGG Pathwayko03040,map03040
KEGG ModuleM00352
Hectar predicted targeting categoryother localisation
GOsGO:0000245,GO:0000375,GO:0000377,GO:0000398,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005684,GO:0005686,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0007275,GO:0007399,GO:0008150,GO:0008152,GO:0008380,GO:0009987,GO:0010467,GO:0010720,GO:0010975,GO:0010976,GO:0016043,GO:0016070,GO:0016071,GO:0016604,GO:0016607,GO:0022008,GO:0022607,GO:0022613,GO:0022618,GO:0030154,GO:0030532,GO:0031344,GO:0031346,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0034622,GO:0034641,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0046483,GO:0048518,GO:0048522,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050767,GO:0050769,GO:0050789,GO:0050793,GO:0050794,GO:0051094,GO:0051128,GO:0051130,GO:0051239,GO:0051240,GO:0051960,GO:0051962,GO:0060284,GO:0065003,GO:0065007,GO:0070013,GO:0071004,GO:0071010,GO:0071013,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:0097525,GO:0120035,GO:0120114,GO:1901360,GO:1901363,GO:1902494,GO:1990904,GO:2000026
Exons2
Evalue1.01e-119
EggNOG OGsCOG5246@1|root,KOG0227@2759|Eukaryota
Ec32 ortholog descriptionUbiquitin-like
Ec32 orthologEc-12_005780.1
Descriptionspliceosomal complex assembly
Cds size933
COG categoryA
BRITEko00000,ko00001,ko00002,ko03041
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186977.4251523-UTR-P-wetherbeei_contig738:44..1791683186977.4251523-UTR-P-wetherbeei_contig738:44..179Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig738 45..179 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186977.4356036-CDS-P-wetherbeei_contig738:179..4641683186977.4356036-CDS-P-wetherbeei_contig738:179..464Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig738 180..464 -
1683186977.448629-CDS-P-wetherbeei_contig738:1144..17921683186977.448629-CDS-P-wetherbeei_contig738:1144..1792Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig738 1145..1792 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig738.1.1prot_P-wetherbeei_contig738.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig738 180..1792 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig738.1.1

>prot_P-wetherbeei_contig738.1.1 ID=prot_P-wetherbeei_contig738.1.1|Name=mRNA_P-wetherbeei_contig738.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=311bp
MQVLVRKLDGRHLCLTAELGDDVAHLRALVEERTGIPAALARLVWCGRDL
QDGVRLHDCDGLGDGSVVGIELRLVGGMDFQNRVGSKFGGGGVMSESQAN
ADRRERLRKLALETIDLNKDPYFMRNHLGKYECKLCLTLHNNEGNYLAHT
QGKRHQENLARRAAMEARNAPIKPQPVAQVHTRSVIKIGRPGYKVTKSRD
PQTQQRSLVFDVDYPEADDGVQPRHRFMSAYEQRVEAPDKRYQYILFACD
PYETIAFKVCHRVRILNLDGGLVALVTSPFLCVLVSLLGPLLSGHWPSSS
VTFAVACTCK*
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mRNA from alignment at P-wetherbeei_contig738:45..1792-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig738.1.1 ID=mRNA_P-wetherbeei_contig738.1.1|Name=mRNA_P-wetherbeei_contig738.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1748bp|location=Sequence derived from alignment at P-wetherbeei_contig738:45..1792- (Phaeothamnion wetherbeei SAG_119_79)
ATGCAGGTCCTTGTGCGAAAACTAGACGGGCGGCACCTTTGCCTGACTGC AGAGCTTGGCGACGATGTGGCTCACTTGCGAGCTTTGGTGGAAGAGCGCA CCGGCATCCCGGCGGCGCTGGCTCGGTTGGTGTGGTGCGGCCGGGATCTC CAAGATGGCGTACGATTGCACGACTGCGACGGCCTCGGCGACGGCAGTGT CGTCGGGATCGAGCTGCGGCTCGTCGGAGGCATGGACTTTCAGAACCGAG TAGGTTCCAAATTCGGCGGCGGCGGCGTCATGTCGGAGAGCCAAGCGAAC GCGGATCGGAGGGAGCGGCTCCGCAAGCTCGCGCTGGAAACTATCGACCT CAACAAAGACCCTTATTTCATGCGCAACCACCTCGGCAAGTACGAGTGCA AACTGTGCCTGACGCTGCACAACAACGAAGGAAACTACCTGGCCCACACG CAGGGCAAGCGCCACCAGGAGAACCTCGCACGGCGGGCGGCGATGGAGGC GCGCAATGCCCCCATCAAGCCGCAGCCGGTGGCGCAGGTGCACACGCGTA GCGTCATCAAGATCGGACGGCCGGGTTACAAGGTGACAAAGTCACGAGAC CCACAGACACAGCAGCGGAGCCTGGTCTTCGATGTGGACTACCCGGAAGT GAGAGGGAGGACGACGGAATGGCATTGCGATTTCGGACGTCGCGTTCGTC GAGTTGCTCCGGAAGCTCAGTGGTTCTTCGGGTTTTGAAAATCTTTTTCG ACGGTATTCATCATTGCTCTGGCAGCGATCGAACAAACGTGTAGTGAAGA CGCCATTGAAAATCCTGGGGTACCGTGACGCTACTTGTGAAGGCTCTTGC TCTGTTGATTGAGGCATCAAGCACGTGTTTGGGTGCAGGTTCATGTGAGC GCTACATTTTCTAGTCCAGCGCCGCCCAGAGATCTGACCTTGTGATTCGT GTCCCTCCTTTCCCCTGTCTACGGTCTTTGGCGGCGTCGGCGGTGTTGCG TGACGACGGTGGCGGTGGCGGCCGGTCTGCGACGGGTGGGTGGCGACGGA TGGCGGGCGTCGCTACAACGGCTGATGGCGGCTGTCCGGTGACGTCATGG GCGGCGTGACGATTCGTCGTACATCACGGCGGCGGGTGCTGTGGCGGCGG CGGCGGCGGTGATGGCGGCGACGGCGGCTGATCGCGGCGGCGATTCGCGG CGACTGACCGCGGCGGCGACTTGTGGCGGCGGGGGGCGGCGGTGGTTTGC GGCGTCTGGCGGCGGCGGCGGTTTGCGACGGCTGGCGACGGCTTGTGGTG GCTGGCGGCGGACGTCGGGCGACGACAGGCGGATGACGGGGTGCAGCCAC GGCACCGCTTCATGTCGGCGTATGAGCAGCGCGTGGAGGCGCCCGACAAG CGCTACCAGTACATCCTCTTCGCCTGCGACCCCTACGAGACCATCGCCTT CAAGGTGTGTCACCGCGTGAGAATTCTGAATCTTGACGGTGGTCTGGTGG CCTTGGTCACCTCGCCCTTCTTATGTGTTCTTGTGTCGCTGTTAGGGCCG CTTCTGTCTGGGCACTGGCCGAGTTCCTCGGTCACCTTTGCTGTTGCGTG CACCTGCAAATGAGGCTAGTAGTTTGCATGTCCGTCCGGACGCTCCGCGC CTGACGTTTCTCTAGTCATTTTTGTTTGGGTTGTTTTCTGTTAGCTAGCA ATCTTTTTGACTTTATCAGCAACTGATAATTCTTTTGTCTTGTGTGTT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig738:45..1792-

>mRNA_P-wetherbeei_contig738.1.1 ID=mRNA_P-wetherbeei_contig738.1.1|Name=mRNA_P-wetherbeei_contig738.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=933bp|location=Sequence derived from alignment at P-wetherbeei_contig738:45..1792- (Phaeothamnion wetherbeei SAG_119_79)
ATGCAGGTCCTTGTGCGAAAACTAGACGGGCGGCACCTTTGCCTGACTGC
AGAGCTTGGCGACGATGTGGCTCACTTGCGAGCTTTGGTGGAAGAGCGCA
CCGGCATCCCGGCGGCGCTGGCTCGGTTGGTGTGGTGCGGCCGGGATCTC
CAAGATGGCGTACGATTGCACGACTGCGACGGCCTCGGCGACGGCAGTGT
CGTCGGGATCGAGCTGCGGCTCGTCGGAGGCATGGACTTTCAGAACCGAG
TAGGTTCCAAATTCGGCGGCGGCGGCGTCATGTCGGAGAGCCAAGCGAAC
GCGGATCGGAGGGAGCGGCTCCGCAAGCTCGCGCTGGAAACTATCGACCT
CAACAAAGACCCTTATTTCATGCGCAACCACCTCGGCAAGTACGAGTGCA
AACTGTGCCTGACGCTGCACAACAACGAAGGAAACTACCTGGCCCACACG
CAGGGCAAGCGCCACCAGGAGAACCTCGCACGGCGGGCGGCGATGGAGGC
GCGCAATGCCCCCATCAAGCCGCAGCCGGTGGCGCAGGTGCACACGCGTA
GCGTCATCAAGATCGGACGGCCGGGTTACAAGGTGACAAAGTCACGAGAC
CCACAGACACAGCAGCGGAGCCTGGTCTTCGATGTGGACTACCCGGAAGC
GGATGACGGGGTGCAGCCACGGCACCGCTTCATGTCGGCGTATGAGCAGC
GCGTGGAGGCGCCCGACAAGCGCTACCAGTACATCCTCTTCGCCTGCGAC
CCCTACGAGACCATCGCCTTCAAGGTGTGTCACCGCGTGAGAATTCTGAA
TCTTGACGGTGGTCTGGTGGCCTTGGTCACCTCGCCCTTCTTATGTGTTC
TTGTGTCGCTGTTAGGGCCGCTTCTGTCTGGGCACTGGCCGAGTTCCTCG
GTCACCTTTGCTGTTGCGTGCACCTGCAAATGA
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