mRNA_P-wetherbeei_contig7367.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7367.1.1
Unique NamemRNA_P-wetherbeei_contig7367.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7367.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7367contigP-wetherbeei_contig7367:1334..1462 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FUH1
PFAMsCHAT,Glyco_trans_1_4,Glyco_transf_41,Glycos_transf_2,Methyltransf_11,TPR_11,TPR_16,TPR_2,TPR_8
Model size129
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryno signal peptide or anchor
Exons1
Evalue3.86e-05
EggNOG OGsCOG3914@1|root,KOG4626@2759|Eukaryota
Descriptionprotein N-acetylglucosaminyltransferase activity
Cds size129
COG categoryO
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186976.657806-CDS-P-wetherbeei_contig7367:1333..14621683186976.657806-CDS-P-wetherbeei_contig7367:1333..1462Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7367 1334..1462 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7367.1.1prot_P-wetherbeei_contig7367.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7367 1334..1462 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7367.1.1

>prot_P-wetherbeei_contig7367.1.1 ID=prot_P-wetherbeei_contig7367.1.1|Name=mRNA_P-wetherbeei_contig7367.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=43bp
LLNNLGAALVAVGRHDEAFARLRQSVELVPDQPATLLNLGSYY
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mRNA from alignment at P-wetherbeei_contig7367:1334..1462-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7367.1.1 ID=mRNA_P-wetherbeei_contig7367.1.1|Name=mRNA_P-wetherbeei_contig7367.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=129bp|location=Sequence derived from alignment at P-wetherbeei_contig7367:1334..1462- (Phaeothamnion wetherbeei SAG_119_79)
CTGCTCAACAACCTGGGGGCGGCGCTCGTGGCTGTGGGGCGGCATGATGA
GGCCTTCGCGCGGCTGCGGCAGTCCGTTGAGCTCGTGCCCGACCAGCCGG
CCACTCTCCTCAACCTGGGCAGCTACTAC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig7367:1334..1462-

>mRNA_P-wetherbeei_contig7367.1.1 ID=mRNA_P-wetherbeei_contig7367.1.1|Name=mRNA_P-wetherbeei_contig7367.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=129bp|location=Sequence derived from alignment at P-wetherbeei_contig7367:1334..1462- (Phaeothamnion wetherbeei SAG_119_79)
CTGCTCAACAACCTGGGGGCGGCGCTCGTGGCTGTGGGGCGGCATGATGA
GGCCTTCGCGCGGCTGCGGCAGTCCGTTGAGCTCGTGCCCGACCAGCCGG
CCACTCTCCTCAACCTGGGCAGCTACTAC
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