mRNA_P-wetherbeei_contig7360.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7360.1.1 vs. uniprot
Match: A0A835ZB77_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB77_9STRA) HSP 1 Score: 194 bits (492), Expect = 4.550e-51 Identity = 130/280 (46.43%), Postives = 162/280 (57.86%), Query Frame = 1
Query: 1 SIGVKELLMTLQRKARLPRRRDDQPFYMAIDHCFAIRGQGTVLTGTVLSG-----RTFELPELRTTKKVKSIQMFRRPVAAARQGDRVGIAVAGLDPSLIERGAAAAPGTVALASAAVALVRKVGFFAGRVRSGALLHVTLGHSTVIAAATFFGAAEIA-----RAKAAAATTGSRASSGPGKLGLPLNALPP----WQGEFAAQAELAGMPVGGCDGDXXXXXXXXXXXXXXXXXXXXXXXXXDNGWATPLQYTLLQFHSPVLAPPDGLVVGSRLDAMA 798
S GV EL L+ R P+R D PF+MA+DHCFA+RGQGTVLTGTVLSG + ELPEL T+KVKS+Q++RRPV A+QGDRVG+ VAGLD +L+ERG AAAPG + AAVA VR V FF G+ SG LHV+ GH+TV+A AT+FGAAE+A R+ A + G+ G L+ +PP W+ +F Q L G D PLQ+ LLQF +PV APP GLV+GS+LD A
Sbjct: 222 SAGVVELAELLRSLVRSPQRSDTGPFHMAVDHCFALRGQGTVLTGTVLSGAVEVGQMIELPELAITRKVKSMQVYRRPVQRAQQGDRVGVCVAGLDAALVERGVAAAPGALRPVRAAVAAVRAVKFFRGKCPSGGKLHVSTGHATVMATATYFGAAEMAAILVDRSPAQSEEQGTVPPPGA------LSDIPPVRVDWRRDFLQQPAL----TRGSD---------------RPDSQAAASAATSQEGRPPLQFALLQFQTPVFAPPGGLVIGSKLDGDA 476
BLAST of mRNA_P-wetherbeei_contig7360.1.1 vs. uniprot
Match: A0A6H5KRB1_9PHAE (Tr-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRB1_9PHAE) HSP 1 Score: 180 bits (456), Expect = 2.950e-45 Identity = 123/287 (42.86%), Postives = 158/287 (55.05%), Query Frame = 1
Query: 1 SIGVKELLMTLQRKARLPRRRDDQPFYMAIDHCFAIRGQGTVLTGTVLSGRT-----FELPELRTTKKVKSIQMFRRPVAAARQGDRVGIAVAGLDPSLIERGAAAAPGTVALASAAVALVRKVGFFAGRVRSGALLHVTLGHSTVIAAATFFGAAEIARAKAAA---ATTGSRASSGPGKLG----LPLN---ALP-PWQGEFAAQAELAGM----PVGGCDGDXXXXXXXXXXXXXXXXXXXXXXXXXDNGWATPLQYTLLQFHSPVLAPPDGLVVGSRLDAMAA 801
++G++ + L R+AR+P RR P Y A DHCF++RGQGT+LTGTVL+G ELP LR KKVKS+QMFR+PV AR GDRVG+ VA LD L+ERG PG+V SAA+ALVRKV F G+ SGA HV+LGHST +A ATFFGA+E+ + G +A G G L LN +LP P + F Q L G+ G D + LQY L FH+PV+ PP +V+GSRLD+M++
Sbjct: 259 AMGIEAVAGELTRRARVPSRRASAPLYFAFDHCFSVRGQGTILTGTVLTGEVKVNQLVELPSLRLQKKVKSMQMFRKPVFIARAGDRVGMCVASLDAKLMERGVVTTPGSVRPISAAIALVRKVPAFTGQCLSGAYCHVSLGHSTAMATATFFGASELKNGLLRLFEHSADGLQALEALGDAGQGQELSLNEIASLPFPSEAAFVQQTHLCGVGSENSTAGADDEVCVDERPV------------------------LQYCHLTFHTPVITPPSSVVLGSRLDSMSS 521
BLAST of mRNA_P-wetherbeei_contig7360.1.1 vs. uniprot
Match: A0A7S2G4D0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G4D0_9STRA) HSP 1 Score: 167 bits (423), Expect = 3.660e-44 Identity = 89/158 (56.33%), Postives = 113/158 (71.52%), Query Frame = 1
Query: 4 IGVKELLMTLQRKARLPRRR-DDQPFYMAIDHCFAIRGQGTVLTGTVLSGRT-----FELPELRTTKKVKSIQMFRRPVAAARQGDRVGIAVAGLDPSLIERGAAAAPGTVALASAAVALVRKVGFFAGRVRSGALLHVTLGHSTVIAAATFFGAAEI 459
IG+ LL + +P RR D +PFY +IDHCF+I+GQGTV+TGTVLSG+ E+P LR KKVKS+QMFRRPV A QGDRVGI + GLD L+ERG AA PG V + AA+ LVRK+ +F G ++G+ +HVT+GHSTV+A TFFGA E+
Sbjct: 88 IGLDTLLEVIHNTVAIPERRCDAEPFYFSIDHCFSIKGQGTVVTGTVLSGKVRINDLVEIPRLRVEKKVKSMQMFRRPVKVACQGDRVGICLQGLDAKLVERGIAATPGLVPVVDAAIVLVRKIRYFRGSCKTGSKMHVTIGHSTVLATVTFFGAKEL 245
BLAST of mRNA_P-wetherbeei_contig7360.1.1 vs. uniprot
Match: A0A7S4E489_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E489_9STRA) HSP 1 Score: 164 bits (414), Expect = 3.830e-40 Identity = 91/158 (57.59%), Postives = 113/158 (71.52%), Query Frame = 1
Query: 1 SIGVKELLMTLQRKARLPRRRDDQPFYMAIDHCFAIRGQGTVLTGTVLSGR-----TFELPELRTTKKVKSIQMFRRPVAAARQGDRVGIAVAGLDPSLIERGAAAAPGTVALASAAVALVRKVGFFAGRVRSGALLHVTLGHSTVIAAATFFGAAEI 459
SIG+ EL+ TL+++AR+P+R D PF+ AIDHCF IRGQGTV+TGT L G+ + ELP L KKVKS+QMFRRP A R GDR G+ +A LD + IERG AAPG+V +A +ALVRKV FF GR + HVTLGH+T +A A FFGAAE+
Sbjct: 198 SIGLDELVATLRKRARVPKRDTDGPFFFAIDHCFPIRGQGTVVTGTALRGQCRVGDSVELPALGLEKKVKSMQMFRRPAKAIRCGDRAGLCLAQLDAAAIERGVVAAPGSVPGLTAVLALVRKVRFFRGRTDTERTFHVTLGHTTTVATAYFFGAAEL 355
BLAST of mRNA_P-wetherbeei_contig7360.1.1 vs. uniprot
Match: A0A0P7UHC8_SCLFO (Uncharacterized protein (Fragment) n=1 Tax=Scleropages formosus TaxID=113540 RepID=A0A0P7UHC8_SCLFO) HSP 1 Score: 158 bits (400), Expect = 2.410e-39 Identity = 106/274 (38.69%), Postives = 146/274 (53.28%), Query Frame = 1
Query: 7 GVKELLMTLQRKARLPRRRDDQPFYMAIDHCFAIRGQGTVLTGTVLSGR-----TFELPELRTTKKVKSIQMFRRPVAAARQGDRVGIAVAGLDPSLIERGAAAAPGTVALASAAVALVRKVGFFAGRVRSGALLHVTLGHSTVIAAATFFGAAEIARAKAAAATTGSRASSGPGK---LGLPLNALPP-----WQGEFAAQAELAGMPVGGCDGDXXXXXXXXXXXXXXXXXXXXXXXXXDNGWATPLQYTLLQFHSPVLAPPDGLVVGSRLD 789
GV EL+ L+R+A LPRR P MAIDHCF+IRGQGTV+TGTVL G + E+P L+ T+KVKSIQMFR+PV A QGDR+G+ V DP L+ERG PG++ A + VRK+ +F G + + + H+++GH TV+A TFFG + + ++++ +A S PG P ++ PP + E+ Q E A G A P Q+ LL+F PV PP LV+GS+LD
Sbjct: 67 GVSELIELLKRQAYLPRRDPSGPLLMAIDHCFSIRGQGTVMTGTVLQGSLSLNDSVEIPALKVTRKVKSIQMFRQPVGGAMQGDRIGVCVTQFDPKLLERGLVCTPGSLRTLHAGLMSVRKISYFRGALTTRSKFHISVGHETVMAKVTFFG---LPPSTSSSSPDNCKALSRPGDPQTTSFPPDSTPPETSFSFDTEYFFQEEYAVGQGGPAKA------------------------------AEPQQWALLEFEKPVTCPPLCLVIGSKLD 307
BLAST of mRNA_P-wetherbeei_contig7360.1.1 vs. uniprot
Match: A0A6P3W6E1_CLUHA (selenocysteine-specific elongation factor n=3 Tax=Clupeidae TaxID=55118 RepID=A0A6P3W6E1_CLUHA) HSP 1 Score: 159 bits (403), Expect = 5.220e-39 Identity = 105/270 (38.89%), Postives = 145/270 (53.70%), Query Frame = 1
Query: 4 IGVKELLMTLQRKARLPRRRDDQPFYMAIDHCFAIRGQGTVLTGTVLSGR-----TFELPELRTTKKVKSIQMFRRPVAAARQGDRVGIAVAGLDPSLIERGAAAAPGTVALASAAVALVRKVGFFAGRVRSGALLHVTLGHSTVIAAATFFGAAEIARAKAAAATTGSRASSGPGKLGLPLNALPP---WQGEFAAQAELAGMPVGGCDGDXXXXXXXXXXXXXXXXXXXXXXXXXDNGWATPLQYTLLQFHSPVLAPPDGLVVGSRLD 789
+G+ EL+ L+++A LP+R MA+DHCF+IRGQGTV+TGTVL G T E+P L+ TKKVKS+QMFRRPV+ A QGDRVG+ V DP L+ERG +PG++ AA+ V K+ +F G + S H++LGH TV+A +FFG+A A GS++ + P P+N + E+ Q E +G +G P Q+ LL+F PV PP+ LV+GSRLD
Sbjct: 198 LGIPELVEVLKQQAFLPQRDSTGSLLMAVDHCFSIRGQGTVMTGTVLQGAVHINDTVEIPALKVTKKVKSMQMFRRPVSMAVQGDRVGVCVTQFDPKLLERGVVCSPGSLHTLYAALIAVHKISYFRGTLASRTKFHISLGHETVMARVSFFGSA---------AACGSQSGAEPDPESQPVNEAEAGFSFDREYRHQEEYV---IGQSEGK------------------------------APEQWALLEFEKPVTCPPNCLVIGSRLD 425
BLAST of mRNA_P-wetherbeei_contig7360.1.1 vs. uniprot
Match: A0A3B4B9C7_9GOBI (Eukaryotic elongation factor, selenocysteine-tRNA-specific n=3 Tax=Oxudercinae TaxID=497678 RepID=A0A3B4B9C7_9GOBI) HSP 1 Score: 158 bits (399), Expect = 1.660e-38 Identity = 105/268 (39.18%), Postives = 140/268 (52.24%), Query Frame = 1
Query: 7 GVKELLMTLQRKARLPRRRDDQPFYMAIDHCFAIRGQGTVLTGTVLSGR-----TFELPELRTTKKVKSIQMFRRPVAAARQGDRVGIAVAGLDPSLIERGAAAAPGTVALASAAVALVRKVGFFAGRVRSGALLHVTLGHSTVIAAATFFGAAEIARAKAAAATTGSRASSGPGKLGL--PLNALPPWQGEFAAQAELAGMPVGGCDGDXXXXXXXXXXXXXXXXXXXXXXXXXDNGWATPLQYTLLQFHSPVLAPPDGLVVGSRLD 789
GV EL+ L+++ LP+R MA+DHCF+IRGQGTV+TGT+L G T E+P L+ TKKVKSIQMFR+P + A QGDRVG+ V DP L+ERG PG++ + AAV V K+G+F G + + A H+T+GH TV+A +FFG GS +S+ P K L P N + E+ Q E P G G + P Q+ LL+F PV P LV+GS+LD
Sbjct: 193 GVSELIQLLKKQTYLPQRDPGGDLLMAVDHCFSIRGQGTVMTGTILQGALAINDTVEIPALKVTKKVKSIQMFRKPASTAMQGDRVGVCVTQFDPKLLERGVICTPGSLRMLYAAVITVHKIGYFKGALSTRAKFHITVGHETVMAKVSFFGL-----------PPGSTSSNSPQKNSLESPFN----FDREYFYQDEYLISPAEGSTG------------------------------SDPEQWALLEFERPVTCPSLCLVIGSKLD 415
BLAST of mRNA_P-wetherbeei_contig7360.1.1 vs. uniprot
Match: A0A4D9D7I1_9STRA (Tr-type G domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D7I1_9STRA) HSP 1 Score: 159 bits (402), Expect = 5.290e-38 Identity = 109/278 (39.21%), Postives = 145/278 (52.16%), Query Frame = 1
Query: 1 SIGVKELLMTLQRKARLPRRRDDQPFYMAIDHCFAIRGQGTVLTGTVLSGRT-----FELPELRTTKKVKSIQMFRRPVAAARQGDRVGIAVAGLDPSLIERGAAAAPGTVALASAAVALVRKVGFFAGRVRSGALLHVTLGHSTVIAAATFFGAAEIARA--KAAAATTGSRASSGPGKLGLPLNALP--------PWQGEFAAQAELAGMPVGGCDGDXXXXXXXXXXXXXXXXXXXXXXXXXDNGWATPLQYTLLQFHSPVLAPPDGLVVGSRLD 789
S+G+++L LQ+ LPRR P +MA+DHCF ++GQGTVLTGTVL GR ELP L T++VKS+Q F R VA A+ GDRVG+ + LD +ERGA PG+V + AV VR++ F GRV+SG +HV++GH TV+A TFFGA E+ R K G G G + A P W+ ++ QAE+AG +G+ QY L +F +PVL P LV+GSRLD
Sbjct: 299 SLGLEDLSRALQKTISLPRRSPSGPLFMAVDHCFPMKGQGTVLTGTVLRGRVSVQDVVELPALGLTRRVKSLQAFHRKVAEAQHGDRVGLCLTHLDAKEMERGALCTPGSVPWVTWAVGAVRQIRAFRGRVKSGERVHVSVGHGTVMATLTFFGAKELVRGREKDKKGRQPREGRDGKGVRGDGVEARPWAPPDFPFSWEEDYLYQAEMAGAVEDEEEGEKEAGFKVSKEGDRRRRREYQE------------QYALFKFETPVLCPLPCLVIGSRLD 564
BLAST of mRNA_P-wetherbeei_contig7360.1.1 vs. uniprot
Match: A0A8C9VP07_SCLFO (Eukaryotic elongation factor, selenocysteine-tRNA specific n=2 Tax=Scleropages formosus TaxID=113540 RepID=A0A8C9VP07_SCLFO) HSP 1 Score: 157 bits (396), Expect = 5.700e-38 Identity = 105/274 (38.32%), Postives = 146/274 (53.28%), Query Frame = 1
Query: 7 GVKELLMTLQRKARLPRRRDDQPFYMAIDHCFAIRGQGTVLTGTVLSGR-----TFELPELRTTKKVKSIQMFRRPVAAARQGDRVGIAVAGLDPSLIERGAAAAPGTVALASAAVALVRKVGFFAGRVRSGALLHVTLGHSTVIAAATFFGAAEIARAKAAAATTGSRASSGPGK---LGLPLNALPP-----WQGEFAAQAELAGMPVGGCDGDXXXXXXXXXXXXXXXXXXXXXXXXXDNGWATPLQYTLLQFHSPVLAPPDGLVVGSRLD 789
GV +L+ L+R+A LPRR P MAIDHCF+IRGQGTV+TGTVL G + E+P L+ T+KVKSIQMFR+PV A QGDR+G+ V DP L+ERG PG++ A + VRK+ +F G + + + H+++GH TV+A TFFG + + ++++ +A S PG P ++ PP + E+ Q E A G A P Q+ LL+F PV PP LV+GS+LD
Sbjct: 200 GVSKLIELLKRQAYLPRRDPSGPLLMAIDHCFSIRGQGTVMTGTVLQGSLSLNDSVEIPALKVTRKVKSIQMFRQPVGGAMQGDRIGVCVTQFDPKLLERGLVCTPGSLRTLHAGLMSVRKISYFRGALTTRSKFHISVGHETVMAKVTFFG---LPPSTSSSSPDNCKALSRPGDPQTTSFPPDSTPPETSFSFDTEYFFQEEYAVGQGGPAKA------------------------------AEPQQWALLEFEKPVTCPPLCLVIGSKLD 440
BLAST of mRNA_P-wetherbeei_contig7360.1.1 vs. uniprot
Match: A0A3B3BUZ1_ORYME (Eukaryotic elongation factor, selenocysteine-tRNA-specific n=1 Tax=Oryzias melastigma TaxID=30732 RepID=A0A3B3BUZ1_ORYME) HSP 1 Score: 155 bits (393), Expect = 6.860e-38 Identity = 103/266 (38.72%), Postives = 138/266 (51.88%), Query Frame = 1
Query: 7 GVKELLMTLQRKARLPRRRDDQPFYMAIDHCFAIRGQGTVLTGTVLSGR-----TFELPELRTTKKVKSIQMFRRPVAAARQGDRVGIAVAGLDPSLIERGAAAAPGTVALASAAVALVRKVGFFAGRVRSGALLHVTLGHSTVIAAATFFGAAEIARAKAAAATTGSRASSGPGKLGLPLNALPPWQGEFAAQAELAGMPVGGCDGDXXXXXXXXXXXXXXXXXXXXXXXXXDNGWATPLQYTLLQFHSPVLAPPDGLVVGSRLD 789
GV+EL+ L+++ LP+R MA+DHCF+IRGQGTV+TGT+L G T E+P L+ TKK+KS+QMFR+PV+ A QGDRVG+ V DP L+ERG PG++ AV VRK+G+F G + + A LH+T+GH TV+A +FFG S A S P +L L A + E+ Q E G G P Q+ LL+F PV P LV+GS+LD
Sbjct: 161 GVQELIELLKKQTYLPKRDPAGDLLMAVDHCFSIRGQGTVMTGTILQGSLAVNDTVEIPVLKVTKKIKSVQMFRKPVSGAMQGDRVGVCVTQFDPKLLERGVVCTPGSLRTLFGAVISVRKIGYFKGSLATRAKLHITVGHETVMARVSFFGLPP------------SDAQSAPPEL-RSLEAPFDFDREYVYQDEYVSAQADGA-----------------------------GGGPDPEQWALLEFERPVTCPALCLVIGSKLD 384 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7360.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7360.1.1 >prot_P-wetherbeei_contig7360.1.1 ID=prot_P-wetherbeei_contig7360.1.1|Name=mRNA_P-wetherbeei_contig7360.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=410bp MTLQRKARLPRRRDDQPFYMAIDHCFAIRGQGTVLTGTVLSGRTFELPELback to top mRNA from alignment at P-wetherbeei_contig7360:462..2699- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7360.1.1 ID=mRNA_P-wetherbeei_contig7360.1.1|Name=mRNA_P-wetherbeei_contig7360.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2238bp|location=Sequence derived from alignment at P-wetherbeei_contig7360:462..2699- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7360:462..2699- >mRNA_P-wetherbeei_contig7360.1.1 ID=mRNA_P-wetherbeei_contig7360.1.1|Name=mRNA_P-wetherbeei_contig7360.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1230bp|location=Sequence derived from alignment at P-wetherbeei_contig7360:462..2699- (Phaeothamnion wetherbeei SAG_119_79)back to top |