mRNA_P-wetherbeei_contig7302.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7302.1.1 vs. uniprot
Match: A0A835ZBS4_9STRA (Ubiquitin-conjugating enzyme/RWD-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBS4_9STRA) HSP 1 Score: 241 bits (615), Expect = 2.310e-71 Identity = 124/201 (61.69%), Postives = 149/201 (74.13%), Query Frame = 2
Query: 5 EEALSSNKATGAHFQDDDVAGIPGMLSGSGASRC-KNTRLMRDLSRMMRTDTSALGFGLEPVHEDCMTVWRVKLFGFVDCPLAKDLEKCKKEKSGPLKGTEHVELEMHFTDDYPYSPPFVRVVWPRFVARTGYIIDGAFCMELLTKQGWTPTNDIESVLVQIRAQMVVGQARVDFAATQPYKESNARAAFKSAADLHKWAI 604
E+A+S+NKATG D+V I G C NTRLMRDLSR+MRTDTS+LGF LE VH+D +T+WRVK+FGF DCPLA+D+ K KKE+ EH+ELEM F +DYPYSPPF RVV+PRF+ +TGYI+DGAFC ELLTKQGWTPTNDIE+V+VQ+R MV G AR+DF T PY E N+ AF+ AA H WAI
Sbjct: 118 EKAVSANKATGTWEDRDEVPLIGGYAC---TYVCIANTRLMRDLSRLMRTDTSSLGFTLELVHDDNLTLWRVKVFGFTDCPLAEDMVKLKKERK-----LEHIELEMKFPEDYPYSPPFCRVVYPRFIRQTGYILDGAFCFELLTKQGWTPTNDIETVIVQLRFLMVFGHARIDFNETTPYCERNSLNAFRGAAKQHNWAI 310
BLAST of mRNA_P-wetherbeei_contig7302.1.1 vs. uniprot
Match: D8LEA1_ECTSI (UBC core domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEA1_ECTSI) HSP 1 Score: 230 bits (586), Expect = 1.590e-66 Identity = 118/201 (58.71%), Postives = 147/201 (73.13%), Query Frame = 2
Query: 35 GAHFQDDDVAGIPGMLSGSGA-----SRCKNTRLMRDLSRMMRTDTSALGFGLEPVHEDCMTVWRVKLFGFVDCPLAKDLEKCKKEKSGPLKGTEHVELEMHFTDDYPYSPPFVRVVWPRFVARTGYIIDGAFCMELLTKQGWTPTNDIESVLVQIRAQMVVGQARVDFAAT---QPYKESNARAAFKSAADLHKWAI*GP 613
G+ F+D D++ + + SGA + NTRLMRDLSR+MR+DT LGF L+ ++D + W + LFGF DCPLA+D+++ +KEK +HV L M F DDYP+SPPFV +V+PRF TGYIIDGAFCMELLT QGWTPTNDIESV+VQIRAQMVVG+AR+DF AT QPY E A+AAF+SAA +HKWAI P
Sbjct: 159 GSVFEDTDISQMLSGKAKSGAGAKSKAASANTRLMRDLSRLMRSDTKKLGFSLQLKNDDALHEWNINLFGFSDCPLAEDMKRLEKEKH-----LDHVRLMMKFKDDYPFSPPFVHIVYPRFKRSTGYIIDGAFCMELLTNQGWTPTNDIESVVVQIRAQMVVGKARIDFDATSVTQPYSEDRAKAAFRSAAKIHKWAISDP 354
BLAST of mRNA_P-wetherbeei_contig7302.1.1 vs. uniprot
Match: A0A7S3XWH9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XWH9_HETAK) HSP 1 Score: 190 bits (482), Expect = 1.810e-52 Identity = 99/184 (53.80%), Postives = 126/184 (68.48%), Query Frame = 2
Query: 56 DVAGIPGMLSGSGASRCKNTRLMRDLSRMMRTDTSALGFGLEPVHEDCMTVWRVKLFGFVDCPLAKDLEKCKKEKSGPLKGTEHVELEMHFTDDYPYSPPFVRVVWPRFVARTGYI-IDGAFCMELLTKQGWTPTNDIESVLVQIRAQMVVGQARVDFAATQPYKESNARAAFKSAADLHKWAI 604
DVA I G G GA+ N RLM DL+++MRTDT+ LGF LEP +ED M W KLF F DC LA+DL + K+ K + VELE+ F DYP+SPPF+RVV+PRF TG++ I G+ CMELLT GWTPTNDIES+L+QIR++M+ G AR++F PY E+ AR+AF A H W+I
Sbjct: 93 DVAEIGG---GHGAT-AGNKRLMTDLAKIMRTDTTGLGFSLEPKNEDSMDRWVCKLFNFEDCALAQDLVQLKERKD-----IDFVELELQFKSDYPFSPPFIRVVYPRFKFHTGHVTIGGSICMELLTNSGWTPTNDIESILIQIRSEMIAGDARIEFRHDYPYDEAEARSAFTRVASQHGWSI 267
BLAST of mRNA_P-wetherbeei_contig7302.1.1 vs. uniprot
Match: B8C5U5_THAPS (UBC core domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C5U5_THAPS) HSP 1 Score: 153 bits (386), Expect = 2.830e-36 Identity = 83/158 (52.53%), Postives = 99/158 (62.66%), Query Frame = 2
Query: 116 RLMRDLSRMMRTDTSALGFGLEPVHEDCMTVWRVKLFGF-VDCPLAKDLEKCKKEKSGPLKGTEHVELEMHFTDDYPYSPPFVRVVWPRFVARTGYIIDGAFCMELLTKQGWTPTNDIESVLVQIRAQMVVGQARVDFAATQPYKESNARAAFKSAAD 586
RL DL ++M DT GF LEP ED M W +KLFGF D LAKDL + G +HVELEM F DDYP+ PPFVRVV PRF +TG++++GA CMELLTK GW P NDIESV+V IR+ MVVG R+ A P A+K+A D
Sbjct: 325 RLASDLYKIMMADTDEAGFSLEPCDEDSMDKWCIKLFGFDCDSHLAKDLM---------VVGMDHVELEMSFPDDYPFEPPFVRVVRPRFKRQTGFVMNGALCMELLTKDGWNPINDIESVIVSIRSLMVVGDGRLQAAVDMPED------AYKTALD 467
BLAST of mRNA_P-wetherbeei_contig7302.1.1 vs. uniprot
Match: K0RZ81_THAOC (UBC core domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RZ81_THAOC) HSP 1 Score: 151 bits (382), Expect = 3.160e-36 Identity = 78/139 (56.12%), Postives = 91/139 (65.47%), Query Frame = 2
Query: 116 RLMRDLSRMMRTDTSALGFGLEPVHEDCMTVWRVKLFGF-VDCPLAKDLEKCKKEKSGPLKGTEHVELEMHFTDDYPYSPPFVRVVWPRFVARTGYIIDGAFCMELLTKQGWTPTNDIESVLVQIRAQMVVGQARVDFA 529
RL DL ++M DT GF LEPV ED M WR+ LFGF D LAKDL C GT+ VEL+M F DDYP+ PPFVRVV PRF +TG+++ GA CMELLT GW P NDIESV+V IR+ MVVG R+ A
Sbjct: 250 RLASDLYKIMMADTKEAGFSLEPVDEDSMDKWRINLFGFDEDSNLAKDLMVC---------GTDSVELQMSFPDDYPFKPPFVRVVKPRFQRQTGFVMSGALCMELLTSDGWNPVNDIESVIVSIRSLMVVGNGRLQAA 379
BLAST of mRNA_P-wetherbeei_contig7302.1.1 vs. uniprot
Match: A0A6B2LKV9_9EUKA (UBC core domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LKV9_9EUKA) HSP 1 Score: 140 bits (353), Expect = 2.940e-35 Identity = 80/168 (47.62%), Postives = 104/168 (61.90%), Query Frame = 2
Query: 119 LMRDLSRMMRTDTSALGFGLEPVHEDCMTV-----WRVKLFGFVDCPLAKDLEKCKKEKSGPLKGTEHVELEMHFTDDYPYSPPFVRVVWPRFVARTGYI-IDGAFCMELLTKQGWTPTNDIESVLVQIRAQMVVGQARVDFAATQPYKESNARAAFKSAADLHKWAI 604
+++DL + R D+ ALGF EP + + W VKL+ D PL DL+ +K+ G ++VELEM F++ YP++PPFVRVV PRF RTG++ I G+ CMELLT GW TNDIES+L+QIRA+M G AR+D A Q Y E A AF AA H W I
Sbjct: 1 MIKDLKSIKREDSKALGFTAEPRIDPAKNLENLYHWIVKLY--FDGPLGTDLQASQKKF-----GIDYVELEMRFSEHYPFTPPFVRVVRPRFQFRTGHVTIGGSICMELLTNSGWRSTNDIESILIQIRAEMQGGNARLDLNAGQSYSEHEAWDAFNRAAGAHGWDI 161
BLAST of mRNA_P-wetherbeei_contig7302.1.1 vs. uniprot
Match: A0A1Z5K8B1_FISSO (Ubiquitin-conjugating enzyme E2 Q n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K8B1_FISSO) HSP 1 Score: 144 bits (364), Expect = 9.890e-35 Identity = 73/139 (52.52%), Postives = 92/139 (66.19%), Query Frame = 2
Query: 116 RLMRDLSRMMRTDTSALGFGLEPVHEDCMTVWRVKLFGF-VDCPLAKDLEKCKKEKSGPLKGTEHVELEMHFTDDYPYSPPFVRVVWPRFVARTGYIIDGAFCMELLTKQGWTPTNDIESVLVQIRAQMVVGQARVDFA 529
RL +DL R+M DTS GF L P ED M W ++LF F D LAKD++ + G +H+ELEM F D YP+ PPFVRVV PRF +TG+++ GA CMELLTK GW P NDIESV+V IR+ +VVG R++ A
Sbjct: 159 RLAQDLYRIMNQDTSEAGFSLHPTAEDSMKHWTIELFQFDPDSNLAKDMK---------VLGIDHIELEMTFPDQYPFEPPFVRVVKPRFKRQTGFVMSGALCMELLTKDGWNPVNDIESVIVSIRSLLVVGDGRLEAA 288
BLAST of mRNA_P-wetherbeei_contig7302.1.1 vs. uniprot
Match: A0A7S1VM08_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VM08_9STRA) HSP 1 Score: 145 bits (365), Expect = 1.420e-34 Identity = 75/146 (51.37%), Postives = 93/146 (63.70%), Query Frame = 2
Query: 116 RLMRDLSRMMRTDTSALGFGLEPVHEDCMTVWRVKLFGF-VDCPLAKDLEKCKKEKSGPLKGTEHVELEMHFTDDYPYSPPFVRVVWPRFVARTGYIIDGAFCMELLTKQGWTPTNDIESVLVQIRAQMVVGQARVDFAATQPYKE 550
RL +L ++M DT GF + P ED M W +KLF F D LAKDLE L G +HVELEM F DYP+ PPFVRVV P+F +TG++++GA CMELLTK GW P NDIESV+V IR+ +VVG+ R+ A KE
Sbjct: 176 RLASELYQIMMRDTKESGFSIAPTREDSMDNWTIKLFQFDQDSMLAKDLE---------LLGLDHVELEMRFPKDYPFEPPFVRVVQPKFKRQTGFVMNGALCMELLTKDGWNPINDIESVIVSIRSLLVVGEGRLQAAVDMQTKE 312
BLAST of mRNA_P-wetherbeei_contig7302.1.1 vs. uniprot
Match: A0A7S1ZF53_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZF53_TRICV) HSP 1 Score: 141 bits (356), Expect = 1.450e-34 Identity = 74/149 (49.66%), Postives = 94/149 (63.09%), Query Frame = 2
Query: 116 RLMRDLSRMMRTDTSALGFGLEPVHEDCMTVWRVKLFGF-VDCPLAKDLEKCKKEKSGPLKGTEHVELEMHFTDDYPYSPPFVRVVWPRFVARTGYIIDGAFCMELLTKQGWTPTNDIESVLVQIRAQMVVGQARVDFAATQPYKESNA 559
RL DL ++M DT GF +EP ED + W V+LF F D L+KDL + G + VELEM F D YP+ PPFVRVV PRF +TG++++GA CMELLT +GW P NDIESV+V IR+ +VVG R+ AA P K+ A
Sbjct: 15 RLAADLYKIMMADTDEAGFKIEPKSEDSLDRWSVRLFAFDEDSNLSKDLA---------VLGIDAVELEMSFPDQYPFEPPFVRVVRPRFKRQTGFVMNGALCMELLTSEGWNPVNDIESVIVSIRSLLVVGDGRLQAAADMPEKKREA 154
BLAST of mRNA_P-wetherbeei_contig7302.1.1 vs. uniprot
Match: A0A7R9YW98_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9YW98_9STRA) HSP 1 Score: 145 bits (367), Expect = 9.820e-34 Identity = 75/149 (50.34%), Postives = 95/149 (63.76%), Query Frame = 2
Query: 116 RLMRDLSRMMRTDTSALGFGLEPVHEDCMTVWRVKLFGF-VDCPLAKDLEKCKKEKSGPLKGTEHVELEMHFTDDYPYSPPFVRVVWPRFVARTGYIIDGAFCMELLTKQGWTPTNDIESVLVQIRAQMVVGQARVDFAATQPYKESNA 559
RL DL ++M DT GF +EP ED M +W ++LF F D L+KDL + G HVELEM F DYP+ PPFVRVV PRF +TG++++GA CMELLTK+GW P NDIESV+V IR+ +VVG R+ A P K+ A
Sbjct: 314 RLAADLYKIMMADTDEAGFQIEPKSEDSMDLWTIRLFAFDEDSNLSKDLM---------VLGLNHVELEMSFPGDYPFEPPFVRVVRPRFKRQTGFVMNGALCMELLTKEGWNPVNDIESVIVSIRSLLVVGDGRLQAAVDLPEKKREA 453 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7302.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7302.1.1 >prot_P-wetherbeei_contig7302.1.1 ID=prot_P-wetherbeei_contig7302.1.1|Name=mRNA_P-wetherbeei_contig7302.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=177bp MLSGSGASRCKNTRLMRDLSRMMRTDTSALGFGLEPVHEDCMTVWRVKLFback to top mRNA from alignment at P-wetherbeei_contig7302:103..2750- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7302.1.1 ID=mRNA_P-wetherbeei_contig7302.1.1|Name=mRNA_P-wetherbeei_contig7302.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2648bp|location=Sequence derived from alignment at P-wetherbeei_contig7302:103..2750- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7302:103..2750- >mRNA_P-wetherbeei_contig7302.1.1 ID=mRNA_P-wetherbeei_contig7302.1.1|Name=mRNA_P-wetherbeei_contig7302.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=531bp|location=Sequence derived from alignment at P-wetherbeei_contig7302:103..2750- (Phaeothamnion wetherbeei SAG_119_79)back to top |