mRNA_P-wetherbeei_contig7300.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7300.1.1
Unique NamemRNA_P-wetherbeei_contig7300.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig7300.1.1 vs. uniprot
Match: A0A835ZDX2_9STRA (Protein kinase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDX2_9STRA)

HSP 1 Score: 183 bits (465), Expect = 2.090e-51
Identity = 81/118 (68.64%), Postives = 99/118 (83.90%), Query Frame = 1 
Query:    1 GMSVKVPDVRFFKLTGDVNKIPYTAMLGTGGYIAPEIMRQVPFGQEADLWSVGVMCYQMICGRMPFMPARSCLTRPANLSGPTWDKVSAECVDLIKRLLEPDPAKRLTARQALQHPWI 354
            G+S KVPD++FFKLTGDVNKIP++ + GTGG+IAPEIMRQ PFG+ AD+WSVGVM YQM+CGRMPFMPAR+CL RP +  G TW  VS E  DLI ++LE DP+KRLTA +AL+HPW+
Sbjct:  637 GLSRKVPDIKFFKLTGDVNKIPFSTLCGTGGFIAPEIMRQQPFGKAADMWSVGVMIYQMLCGRMPFMPARACLERPPSYLGATWRNVSEEAKDLINKMLERDPSKRLTAAEALEHPWL 754
[Close]
BLAST of mRNA_P-wetherbeei_contig7300.1.1 vs. uniprot
Match: D7G9F4_ECTSI (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G9F4_ECTSI)

HSP 1 Score: 165 bits (418), Expect = 4.640e-45
Identity = 74/118 (62.71%), Postives = 92/118 (77.97%), Query Frame = 1 
Query:    1 GMSVKVPDVRFFKLTGDVNKIPYTAMLGTGGYIAPEIMRQVPFGQEADLWSVGVMCYQMICGRMPFMPARSCLTRPANLSGPTWDKVSAECVDLIKRLLEPDPAKRLTARQALQHPWI 354
            G+S KVPDVRF+K TGD+NKIP++ + GTGGYIAPEIM Q PFG+ ADLWSVGVM YQMI GR+PF+PAR C+T+P +     W  V+     LI+ LLE +P++RLTA QALQHPW+
Sbjct:  819 GISCKVPDVRFYKQTGDINKIPWSGLFGTGGYIAPEIMSQQPFGKPADLWSVGVMLYQMISGRLPFIPARKCVTKPVSFPAAVWADVNVGVKSLIEGLLEKEPSQRLTAAQALQHPWV 936
[Close]
BLAST of mRNA_P-wetherbeei_contig7300.1.1 vs. uniprot
Match: W7TQL8_9STRA (Calcium calmodulin-dependent protein variant variant n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TQL8_9STRA)

HSP 1 Score: 144 bits (362), Expect = 8.060e-41
Identity = 61/118 (51.69%), Postives = 84/118 (71.19%), Query Frame = 1 
Query:    1 GMSVKVPDVRFFKLTGDVNKIPYTAMLGTGGYIAPEIMRQVPFGQEADLWSVGVMCYQMICGRMPFMPARSCLTRPANLSGPTWDKVSAECVDLIKRLLEPDPAKRLTARQALQHPWI 354
            G+S KVPDVRFFK TGD+ ++P++ + GTGG+I PEI+R+ PFG+  DLW+VGV+CY+M+ G +PF+P   CL +P    G  W+ +S +    I RLL PD  KR TAR+AL H W+
Sbjct:   63 GLSRKVPDVRFFKQTGDIYRVPFSRICGTGGFIPPEIIRKQPFGKPTDLWAVGVICYRMLAGTLPFIPPTKCLDQPVRFQGRAWEGISKDAQHFIARLLTPDQNKRATAREALGHRWL 180
[Close]
BLAST of mRNA_P-wetherbeei_contig7300.1.1 vs. uniprot
Match: M4C1F5_HYAAE (Putative serine/threonine protein kinase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C1F5_HYAAE)

HSP 1 Score: 151 bits (382), Expect = 9.330e-41
Identity = 65/118 (55.08%), Postives = 88/118 (74.58%), Query Frame = 1 
Query:    1 GMSVKVPDVRFFKLTGDVNKIPYTAMLGTGGYIAPEIMRQVPFGQEADLWSVGVMCYQMICGRMPFMPARSCLTRPANLSGPTWDKVSAECVDLIKRLLEPDPAKRLTARQALQHPWI 354
            G+SVKVPDVRFFKLTGDV+K+P+T + GT GYIAPE+++Q P+G+  D+WSVG++ ++M+ G  PF P   C+   A+ S   W  +SA+  DL++RLLE DPAKRLTA +AL H W 
Sbjct:  479 GLSVKVPDVRFFKLTGDVHKVPFTKVTGTSGYIAPELLQQQPYGKPVDMWSVGIIIFEMLTGYQPFYPPHMCIEEDADFSDRVWKTISADAKDLVQRLLERDPAKRLTAAEALAHTWF 596
[Close]
BLAST of mRNA_P-wetherbeei_contig7300.1.1 vs. uniprot
Match: M4BH99_HYAAE (Putative serine/threonine protein kinase n=2 Tax=Hyaloperonospora TaxID=184462 RepID=M4BH99_HYAAE)

HSP 1 Score: 151 bits (382), Expect = 1.410e-40
Identity = 65/118 (55.08%), Postives = 88/118 (74.58%), Query Frame = 1 
Query:    1 GMSVKVPDVRFFKLTGDVNKIPYTAMLGTGGYIAPEIMRQVPFGQEADLWSVGVMCYQMICGRMPFMPARSCLTRPANLSGPTWDKVSAECVDLIKRLLEPDPAKRLTARQALQHPWI 354
            G+SVKVPDVRFFKLTGDV+K+P+T + GT GYIAPE+++Q P+G+  D+WSVG++ ++M+ G  PF P   C+   A+ S   W  +SA+  DL++RLLE DPAKRLTA +AL H W 
Sbjct:  528 GLSVKVPDVRFFKLTGDVHKVPFTKVTGTSGYIAPELLQQQPYGKPVDMWSVGIIIFEMLTGYQPFYPPHMCIEEDADFSDRVWKTISADAKDLVQRLLERDPAKRLTAAEALAHTWF 645
[Close]
BLAST of mRNA_P-wetherbeei_contig7300.1.1 vs. uniprot
Match: A0A7S3XRG1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XRG1_HETAK)

HSP 1 Score: 146 bits (368), Expect = 3.210e-40
Identity = 66/118 (55.93%), Postives = 86/118 (72.88%), Query Frame = 1 
Query:    1 GMSVKVPDVRFFKLTGDVNKIPYTAMLGTGGYIAPEIMRQVPFGQEADLWSVGVMCYQMICGRMPFMPARSCLTRPANLSGPTWDKVSAECVDLIKRLLEPDPAKRLTARQALQHPWI 354
            GMS KVPDVR+FK TGDVNKIP+TA+ GT  Y+APEI+ + P+G+ ADLWSVGV+ Y+++ G MPF+P R+C  R     G  WDK S    D++ +LL  +P +RLT  QALQHPW+
Sbjct:  225 GMSRKVPDVRYFKATGDVNKIPFTALTGTEQYMAPEILLKEPYGKPADLWSVGVLMYKLLAGIMPFIPTRACFARKPAFPGYMWDKFSLLAPDMVGKLLTVNPDERLTVAQALQHPWL 342
[Close]
BLAST of mRNA_P-wetherbeei_contig7300.1.1 vs. uniprot
Match: H3GCF9_PHYRM (Protein kinase domain-containing protein n=17 Tax=Phytophthora TaxID=4783 RepID=H3GCF9_PHYRM)

HSP 1 Score: 149 bits (377), Expect = 9.280e-40
Identity = 64/118 (54.24%), Postives = 88/118 (74.58%), Query Frame = 1 
Query:    1 GMSVKVPDVRFFKLTGDVNKIPYTAMLGTGGYIAPEIMRQVPFGQEADLWSVGVMCYQMICGRMPFMPARSCLTRPANLSGPTWDKVSAECVDLIKRLLEPDPAKRLTARQALQHPWI 354
            G+SVKVPDVRFFKLTGDV+K+P+T + GT GYIAPE+++Q  +G+  D+WSVG++ ++M+ G  PF P  +C+   A+ S   W  +SA+  DL++RLLE DPAKRLTA +AL H W 
Sbjct:  571 GLSVKVPDVRFFKLTGDVHKVPFTGVTGTSGYIAPELLQQQSYGKPVDMWSVGIIIFEMLTGYQPFYPPHACIEEDADFSDRVWKTISADAKDLVQRLLERDPAKRLTAAEALAHTWF 688
[Close]
BLAST of mRNA_P-wetherbeei_contig7300.1.1 vs. uniprot
Match: A0A484E7G5_BRELC (Protein kinase domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E7G5_BRELC)

HSP 1 Score: 149 bits (375), Expect = 1.950e-39
Identity = 62/118 (52.54%), Postives = 89/118 (75.42%), Query Frame = 1 
Query:    1 GMSVKVPDVRFFKLTGDVNKIPYTAMLGTGGYIAPEIMRQVPFGQEADLWSVGVMCYQMICGRMPFMPARSCLTRPANLSGPTWDKVSAECVDLIKRLLEPDPAKRLTARQALQHPWI 354
            G+SVKVPDVRFFKLTGDV+K+P+T + G+ GYIAPE+++Q  +G+  D+WSVG++ ++++ G  PF P  +C+   AN S   W+ +SA+  DL++RLLE DPAKR+TA +AL H W 
Sbjct:  592 GLSVKVPDVRFFKLTGDVHKVPFTGVTGSAGYIAPELLQQQSYGKPVDMWSVGIIIFEILTGYQPFYPPHACIEEDANFSDRVWETISADAKDLVQRLLERDPAKRITAAEALAHSWF 709
[Close]
BLAST of mRNA_P-wetherbeei_contig7300.1.1 vs. uniprot
Match: A0A0P1A3W8_PLAHL (Camk protein kinase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A3W8_PLAHL)

HSP 1 Score: 148 bits (374), Expect = 2.400e-39
Identity = 64/118 (54.24%), Postives = 86/118 (72.88%), Query Frame = 1 
Query:    1 GMSVKVPDVRFFKLTGDVNKIPYTAMLGTGGYIAPEIMRQVPFGQEADLWSVGVMCYQMICGRMPFMPARSCLTRPANLSGPTWDKVSAECVDLIKRLLEPDPAKRLTARQALQHPWI 354
            G+SVKVPDVRFFKLTGDV+K+P+T + GT GYIAPE++ Q  +G+  D+WSVG++ ++M+ G  PF P  +C+   AN S   W  +S +  DL++RLLE DPAKRLTA +AL H W 
Sbjct:  569 GLSVKVPDVRFFKLTGDVHKVPFTGVTGTAGYIAPELLLQQSYGKPVDMWSVGIIIFEMLTGYKPFYPPHTCIQEDANFSDRVWKTISTDAKDLVQRLLERDPAKRLTAAEALAHSWF 686
[Close]
BLAST of mRNA_P-wetherbeei_contig7300.1.1 vs. uniprot
Match: A0A3M6VTN0_9STRA (Protein kinase domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VTN0_9STRA)

HSP 1 Score: 148 bits (373), Expect = 3.340e-39
Identity = 63/118 (53.39%), Postives = 87/118 (73.73%), Query Frame = 1 
Query:    1 GMSVKVPDVRFFKLTGDVNKIPYTAMLGTGGYIAPEIMRQVPFGQEADLWSVGVMCYQMICGRMPFMPARSCLTRPANLSGPTWDKVSAECVDLIKRLLEPDPAKRLTARQALQHPWI 354
            G+SVKVPDVRFFKLTGDV+K+P+T + GT GYIAPE+++Q  +G+  D+WSVG++ ++M+ G  PF P  +C+   A+ S   W  +SA+  DL++RLLE DP KRLTA +AL H W 
Sbjct:  571 GLSVKVPDVRFFKLTGDVHKVPFTGVTGTSGYIAPELLQQQSYGKPVDMWSVGIIIFEMLTGYQPFYPPHACIEEDADFSDRVWKTISADAKDLVQRLLERDPTKRLTAAEALAHTWF 688
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7300.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZDX2_9STRA2.090e-5168.64Protein kinase domain-containing protein n=1 Tax=T... [more]
D7G9F4_ECTSI4.640e-4562.71Protein kinase domain-containing protein n=2 Tax=E... [more]
W7TQL8_9STRA8.060e-4151.69Calcium calmodulin-dependent protein variant varia... [more]
M4C1F5_HYAAE9.330e-4155.08Putative serine/threonine protein kinase n=1 Tax=H... [more]
M4BH99_HYAAE1.410e-4055.08Putative serine/threonine protein kinase n=2 Tax=H... [more]
A0A7S3XRG1_HETAK3.210e-4055.93Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
H3GCF9_PHYRM9.280e-4054.24Protein kinase domain-containing protein n=17 Tax=... [more]
A0A484E7G5_BRELC1.950e-3952.54Protein kinase domain-containing protein n=1 Tax=B... [more]
A0A0P1A3W8_PLAHL2.400e-3954.24Camk protein kinase n=1 Tax=Plasmopara halstedii T... [more]
A0A3M6VTN0_9STRA3.340e-3953.39Protein kinase domain-containing protein n=1 Tax=P... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7300contigP-wetherbeei_contig7300:227..1115 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7G9F4
Preferred nameCDPK1
PFAMsEF-hand_1,EF-hand_5,EF-hand_6,EF-hand_7,Pkinase
Model size354
Max annot lvl2759|Eukaryota
KEGG koko:K00924,ko:K02183,ko:K04515,ko:K06180,ko:K08794,ko:K13412
KEGG Pathwayko04012,ko04014,ko04015,ko04016,ko04020,ko04022,ko04024,ko04066,ko04070,ko04114,ko04217,ko04218,ko04261,ko04270,ko04310,ko04360,ko04371,ko04626,ko04713,ko04720,ko04722,ko04725,ko04728,ko04740,ko04744,ko04745,ko04750,ko04910,ko04911,ko04912,ko04915,ko04916,ko04921,ko04922,ko04924,ko04925,ko04934,ko04970,ko04971,ko05010,ko05031,ko05034,ko05133,ko05145,ko05152,ko05167,ko05200,ko05205,ko05214,ko05418,map04012,map04014,map04015,map04016,map04020,map04022,map04024,map04066,map04070,map04114,map04217,map04218,map04261,map04270,map04310,map04360,map04371,map04626,map04713,map04720,map04722,map04725,map04728,map04740,map04744,map04745,map04750,map04910,map04911,map04912,map04915,map04916,map04921,map04922,map04924,map04925,map04934,map04970,map04971,map05010,map05031,map05034,map05133,map05145,map05152,map05167,map05200,map05205,map05214,map05418
Hectar predicted targeting categoryother localisation
GOsGO:0001101,GO:0001558,GO:0002831,GO:0002832,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0004683,GO:0004697,GO:0004698,GO:0004713,GO:0004721,GO:0004722,GO:0005488,GO:0005509,GO:0005515,GO:0005516,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005773,GO:0005777,GO:0005778,GO:0005783,GO:0005789,GO:0005829,GO:0005886,GO:0005911,GO:0006464,GO:0006468,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006952,GO:0006970,GO:0007154,GO:0007165,GO:0007275,GO:0007568,GO:0008150,GO:0008152,GO:0009266,GO:0009267,GO:0009314,GO:0009408,GO:0009409,GO:0009414,GO:0009415,GO:0009416,GO:0009506,GO:0009555,GO:0009605,GO:0009607,GO:0009620,GO:0009628,GO:0009636,GO:0009651,GO:0009719,GO:0009725,GO:0009737,GO:0009738,GO:0009751,GO:0009755,GO:0009787,GO:0009789,GO:0009931,GO:0009937,GO:0009939,GO:0009966,GO:0009967,GO:0009987,GO:0009991,GO:0010033,GO:0010035,GO:0010119,GO:0010150,GO:0010152,GO:0010243,GO:0010286,GO:0010359,GO:0010646,GO:0010647,GO:0010769,GO:0010857,GO:0010959,GO:0012505,GO:0014070,GO:0016020,GO:0016036,GO:0016301,GO:0016310,GO:0016311,GO:0016740,GO:0016772,GO:0016773,GO:0016787,GO:0016788,GO:0016791,GO:0018105,GO:0018108,GO:0018193,GO:0018209,GO:0018212,GO:0019538,GO:0019899,GO:0019902,GO:0019903,GO:0021700,GO:0022603,GO:0022604,GO:0022898,GO:0023051,GO:0023052,GO:0023056,GO:0030054,GO:0031090,GO:0031347,GO:0031348,GO:0031667,GO:0031668,GO:0031669,GO:0031903,GO:0031984,GO:0032101,GO:0032102,GO:0032409,GO:0032412,GO:0032501,GO:0032502,GO:0032870,GO:0032879,GO:0033554,GO:0033993,GO:0034762,GO:0034765,GO:0035556,GO:0036211,GO:0040008,GO:0042175,GO:0042221,GO:0042493,GO:0042578,GO:0042579,GO:0042594,GO:0043167,GO:0043169,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043266,GO:0043269,GO:0043412,GO:0043900,GO:0043901,GO:0044070,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0045595,GO:0046677,GO:0046777,GO:0046872,GO:0046898,GO:0047484,GO:0048229,GO:0048366,GO:0048367,GO:0048518,GO:0048519,GO:0048522,GO:0048583,GO:0048584,GO:0048585,GO:0048638,GO:0048731,GO:0048827,GO:0048831,GO:0048856,GO:0050789,GO:0050793,GO:0050794,GO:0050832,GO:0050896,GO:0051049,GO:0051128,GO:0051239,GO:0051510,GO:0051704,GO:0051707,GO:0051716,GO:0055044,GO:0060284,GO:0060688,GO:0060992,GO:0065007,GO:0065009,GO:0070887,GO:0071215,GO:0071229,GO:0071310,GO:0071396,GO:0071495,GO:0071496,GO:0071704,GO:0071944,GO:0080092,GO:0080134,GO:0090693,GO:0097305,GO:0097306,GO:0098542,GO:0098588,GO:0098805,GO:0098827,GO:0099402,GO:0140096,GO:1900424,GO:1900425,GO:1900618,GO:1901000,GO:1901001,GO:1901002,GO:1901016,GO:1901379,GO:1901419,GO:1901421,GO:1901564,GO:1901654,GO:1901698,GO:1901700,GO:1901701,GO:1901979,GO:1902456,GO:1902584,GO:1903959,GO:1904062,GO:1905428,GO:1905957,GO:1905959,GO:2000026,GO:2000032,GO:2000070,GO:2000241,GO:2001257
Exons3
Evalue3.47e-45
EggNOG OGsKOG0032@1|root,KOG0032@2759|Eukaryota
Ec32 ortholog descriptionProtein kinase domain
Ec32 orthologEc-28_000730.1
EC2.7.11.1,2.7.11.17,5.4.99.23
Descriptionprotein serine/threonine kinase activity
Cds size351
COG categoryT
BRITEko00000,ko00001,ko01000,ko01001,ko01009,ko03009,ko03036,ko04131,ko04147
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186971.2304533-UTR-P-wetherbeei_contig7300:226..2291683186971.2304533-UTR-P-wetherbeei_contig7300:226..229Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig7300 227..229 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186971.2477202-CDS-P-wetherbeei_contig7300:229..3461683186971.2477202-CDS-P-wetherbeei_contig7300:229..346Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7300 230..346 +
1683186971.26439-CDS-P-wetherbeei_contig7300:572..7101683186971.26439-CDS-P-wetherbeei_contig7300:572..710Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7300 573..710 +
1683186971.2735424-CDS-P-wetherbeei_contig7300:1019..11151683186971.2735424-CDS-P-wetherbeei_contig7300:1019..1115Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7300 1020..1115 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7300.1.1prot_P-wetherbeei_contig7300.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7300 230..1115 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7300.1.1

>prot_P-wetherbeei_contig7300.1.1 ID=prot_P-wetherbeei_contig7300.1.1|Name=mRNA_P-wetherbeei_contig7300.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=117bp
MSVKVPDVRFFKLTGDVNKIPYTAMLGTGGYIAPEIMRQVPFGQEADLWS
VGVMCYQMICGRMPFMPARSCLTRPANLSGPTWDKVSAECVDLIKRLLEP
DPAKRLTARQALQHPWI
back to top

mRNA from alignment at P-wetherbeei_contig7300:227..1115+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7300.1.1 ID=mRNA_P-wetherbeei_contig7300.1.1|Name=mRNA_P-wetherbeei_contig7300.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=889bp|location=Sequence derived from alignment at P-wetherbeei_contig7300:227..1115+ (Phaeothamnion wetherbeei SAG_119_79)
GGGATGAGCGTGAAGGTGCCGGACGTGCGCTTCTTCAAGCTCACGGGGGA
CGTCAACAAAATCCCCTACACGGCCATGCTGGGCACTGGAGGCTACATCG
CGCCAGAGATCATGCGGCAGGTGCGTTCTTCGTCGTGTCGCGGGGAGAAC
CCATCCGTCCTGGAGCGGTGTGGCAACTATAAACTGAACAGTTCCAGCGT
TGGTCCGTTTCTTGCTAGCGTAACAGTCTCCGGCGCTGTTGTCGCCAACG
CGGAGCTCCGAACCACACTCTCTAAGAATTTTCTGTGAGGTGATGCTTCC
CATGGCAACACCAATCGTTGTTTTCTGAGACTCAAACAAACCTTAGGTGC
CGTTTGGCCAGGAGGCGGACCTGTGGAGCGTGGGCGTGATGTGCTACCAG
ATGATCTGCGGCCGCATGCCCTTCATGCCCGCCCGGTCGTGCCTCACGCG
GCCCGCCAACCTTTCCGGGCCCACCTGGGACAAGGTGACGAGATCAGCTG
ACCGACAGCTACATTTCCCTTCTGCGTTGCCAGCTTTCAGTTCTGCACCG
GAAGGTTGATGTCGTTGTTGACTGCAATGTCGGTGCGTTTGCCTCCCATG
AATTAGTTTCCTTGTCTCGGGATCAAACTTCCCGCCTTTGCAATGAGATT
TCACTGAGTCTGAAACAAAGGCGCTTTCTCGCTGGTAAGCTTATCCTGGA
TCCTTCGCTTTTTCCGCAATGCCTCTGGCGGCGGCGGCGGCGCGCGGTGG
ATATTTCGGGCGGCGGGCGGCGGCGGGCGGTCGGCGGCGGCAGGTGAGCG
CCGAGTGTGTGGACCTGATCAAGCGGCTGCTGGAGCCTGACCCGGCCAAG
CGGCTGACGGCCCGCCAAGCGCTGCAGCACCCATGGATC
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig7300:227..1115+

>mRNA_P-wetherbeei_contig7300.1.1 ID=mRNA_P-wetherbeei_contig7300.1.1|Name=mRNA_P-wetherbeei_contig7300.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=351bp|location=Sequence derived from alignment at P-wetherbeei_contig7300:227..1115+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAGCGTGAAGGTGCCGGACGTGCGCTTCTTCAAGCTCACGGGGGACGT
CAACAAAATCCCCTACACGGCCATGCTGGGCACTGGAGGCTACATCGCGC
CAGAGATCATGCGGCAGGTGCCGTTTGGCCAGGAGGCGGACCTGTGGAGC
GTGGGCGTGATGTGCTACCAGATGATCTGCGGCCGCATGCCCTTCATGCC
CGCCCGGTCGTGCCTCACGCGGCCCGCCAACCTTTCCGGGCCCACCTGGG
ACAAGGTGAGCGCCGAGTGTGTGGACCTGATCAAGCGGCTGCTGGAGCCT
GACCCGGCCAAGCGGCTGACGGCCCGCCAAGCGCTGCAGCACCCATGGAT
C
back to top