mRNA_P-wetherbeei_contig7299.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7299.1.1 vs. uniprot
Match: A0A061RHZ8_9CHLO (Uncharacterized protein n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RHZ8_9CHLO) HSP 1 Score: 192 bits (489), Expect = 4.160e-56 Identity = 92/176 (52.27%), Postives = 113/176 (64.20%), Query Frame = 3
Query: 69 VCGHNHVSYESKEAAVLAGATVMHCGNCGKCSNRDDIDIYERTKDTLTYTTTRCAYAYLVLGRWAAAACMRRSVGFTDSCNECWLDNIECDM-RECLWICLKHTLAGSANNLEGEELNACLACDEEQCGPVFIQCAGANRRRSGIISDIGRPNEQVCTDVDPWPAGGRDRAAGRQR 593
VCG + V+Y SKE A G +H GNCG+CSNR DI IY TK+TLT T CAY L++G WA CM+ +V FTD C ECW+DNI+CD+ CLW+CLK +L NL LN CL CDE+ CGP F++CAGANRRRSGI SDI RP ++V W DR R++
Sbjct: 27 VCGEDGVTYVSKEDAHAHGVLAIHSGNCGRCSNRQDIQIYNSTKNTLTTTAKLCAYLTLLVGEWAGRRCMK-TVNFTDGCRECWMDNIKCDIGSRCLWVCLKSSLKLEPRNLPDGRLNDCLQCDEDVCGPAFLKCAGANRRRSGIRSDIDRPEDEV------WEGDDLDRVLDRKK 195
BLAST of mRNA_P-wetherbeei_contig7299.1.1 vs. uniprot
Match: A0A7S1SVQ4_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SVQ4_9CHLO) HSP 1 Score: 171 bits (434), Expect = 1.730e-47 Identity = 82/164 (50.00%), Postives = 100/164 (60.98%), Query Frame = 3
Query: 78 HNHVSYESKEAAVLAGATVMHCGNCGKCSNRDDIDIYERTKDTLTYTTTRCAYAYLVLGRWAAAACMRRSVGFTDSCNECWLDNIECDMRECLWICLKHTLAGSANNLEGEELNACLACDEEQCGPVFIQCAGANRRRSGIISDIGRPN-EQVCTDVDP-WPAG 563
+N+ +Y + EAA V HCG+CG CS DIDI + TK++LT T TRCA GR A C VGFT C CW+DN+ C C++ CL+ + +NN E ELN CL CDE+ CGP FI CAGANRRRSGI+SDIGR N +VC VD W G
Sbjct: 81 NNYTTYNNVEAAHANDGLVRHCGDCGDCSTARDIDILDVTKNSLTKTATRCAVQKFFGGRAAVERCFDSDVGFTPPCTTCWVDNVMCTQNACVFNCLRSLILRESNNAESGELNRCLECDEKMCGPAFILCAGANRRRSGIVSDIGRDNLAEVCKKVDEDWAVG 244
BLAST of mRNA_P-wetherbeei_contig7299.1.1 vs. uniprot
Match: A0A7S4RSG6_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RSG6_9STRA) HSP 1 Score: 165 bits (418), Expect = 1.580e-44 Identity = 78/160 (48.75%), Postives = 105/160 (65.62%), Query Frame = 3
Query: 81 NHVSYESKEAAVLAGATVMHCGNCGKCSNRDDIDIYERTKDTLTYTTTRCAYAYLVLGRWAAAACMRRSVGFTDSCNECWLDNIECDMRECLWICLKHTLAGS--ANNLEGEE-LNACLACDEEQCGPVFIQCAGANRRRSGIISDIGRPNE-QVCTDVD 548
+H + A V +CG CG+CSN D+ IY+ TK+TLT RCAY L+ GR + CMR++VGFTDSCNECW+DNI CDM++C ++C+ + + G + G+E LN C CDE++CG F CAGANRRRSGIISDI R ++ ++CT D
Sbjct: 110 SHADELKSSGVEVDDAVVANCGTCGQCSNPHDVGIYDDTKNTLTGDAKRCAYRALIGGRGPSTDCMRKNVGFTDSCNECWVDNIMCDMKKCAFVCMWNEIFGRQFGHTSGGKEILNPCKTCDEKRCGRAFTNCAGANRRRSGIISDIARDDKNELCTVAD 269
BLAST of mRNA_P-wetherbeei_contig7299.1.1 vs. uniprot
Match: A0A6U1RQQ2_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A6U1RQQ2_CYCTE) HSP 1 Score: 161 bits (408), Expect = 3.210e-43 Identity = 76/148 (51.35%), Postives = 98/148 (66.22%), Query Frame = 3
Query: 132 VMHCGNCGKCSNRDDIDIYERTKDTLTYTTTRCAYAYLVLGRWAAAACMRRSVGFTDSCNECWLDNIECDMRECLWICL---------KHTLAGSANNLEGEELNACLACDEEQCGPVFIQCAGANRRRSGIISDIGRPN-EQVCTDV 545
V+HC +CG CSN DI IY T++TLT TT +CA L+ GR A CM RSVGFT C CW++NI CD++ C++IC+ K ++AG + EL C CDE++CGP FIQCAGANRRRSGI+SDI R + +VCTD+
Sbjct: 101 VVHCESCGSCSNSHDIAIYYDTRNTLTETTVQCAKQSLIWGRRTANKCMERSVGFTQPCQYCWVENILCDLKYCVFICMWSRLFSLRTKSSVAGGKDGAAPRELTPCTKCDEKRCGPQFIQCAGANRRRSGIVSDIQRDDAHEVCTDI 248
BLAST of mRNA_P-wetherbeei_contig7299.1.1 vs. uniprot
Match: A0A1Z5JSM5_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JSM5_FISSO) HSP 1 Score: 156 bits (395), Expect = 2.040e-41 Identity = 71/143 (49.65%), Postives = 95/143 (66.43%), Query Frame = 3
Query: 129 TVMHCGNCGKCSNRDDIDIYERTKDTLTYTTTRCAYAYLVLGRWAAAACMRRSVGFTDSCNECWLDNIECDMRECLWICLKHTLAGSANNLEGEE-LNACLACDEEQCGPVFIQCAGANRRRSGIISDIGRP-NEQVCTDVDP 551
TV HCG+CGKCSN D++IY+ TK+TL TT C + GR A CM +VGFT+ CNECW++NI CD+R C++ C+ + L AN + ++ LN C CDE +CGP F+ CAG NRRR+GI+SDI R +VC + P
Sbjct: 112 TVAHCGDCGKCSNPHDVNIYDDTKNTLFDTTLTCGKRAFIWGRRTADKCMMENVGFTEPCNECWVENILCDLRYCIFTCIWYGLFNEANTGQDQKTLNPCTRCDELRCGPEFVTCAGVNRRRAGILSDIERDLKNEVCHEAAP 254
BLAST of mRNA_P-wetherbeei_contig7299.1.1 vs. uniprot
Match: A0A835YBJ5_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835YBJ5_9CHLO) HSP 1 Score: 155 bits (391), Expect = 2.090e-41 Identity = 76/173 (43.93%), Postives = 103/173 (59.54%), Query Frame = 3
Query: 30 GLRPAVADIDEGRVCGHNHVSYESKEAAVLAGATVMHCGNCGKCSNRDDIDIYERTKDTLTYTTTRCAYAYLVLGRWAAAACMRRSVGFTDSCNECWLDNIECDMRECLWICLKHTLAGSANNLEGEE----LNACLACDEEQCGPVFIQCAGANRRRSGIISDIGRPNEQVC 536
GL P D RVCG + +Y S + A AG V++CG CG+CSN+ D+D+Y RT+ LT C + R C+ ++GFT C C+ +NI+CD + CLW CL +T+ G++ N CLACDE CGP F++CAGANRRRSGIISDI R +++VC
Sbjct: 49 GLAPGYRD---PRVCGVDGTTYASADEAKAAGTQVLNCGPCGECSNQQDLDLYLRTRTNLTVLVRACGMRLIAKRR---DKCLE-ALGFTPGCQRCYAENIQCDKKHCLWPCLVYTVRSWIWPAHGQQESLHSNPCLACDEANCGPAFLECAGANRRRSGIISDISRDDKEVC 214
BLAST of mRNA_P-wetherbeei_contig7299.1.1 vs. uniprot
Match: A0A7S1D0G0_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D0G0_CYCTE) HSP 1 Score: 149 bits (377), Expect = 1.900e-40 Identity = 64/136 (47.06%), Postives = 90/136 (66.18%), Query Frame = 3
Query: 144 GNCGKCSNRDDIDIYERTKDTLTYTTTRCAYAYLVLGRWAAAACMRRSVGFTDSCNECWLDNIECDMRECLWICLKHTLAGSANNLEGEELNACLACDEEQCGPVFIQCAGANRRRSGIISDIGRPNE-QVCTDVD 548
G+CG+CS D+ + +T++TLT+ +T CA V G+ A + C+ R VGFT CN CW+DNI+C + C + CLK+ L G +NN + LN+CL CDE CGP F+ C+GANRRR G++SDIGR + + C D
Sbjct: 1 GSCGQCSTVHDMSVMGQTRNTLTHDSTMCAMLIFVGGKRAVSKCLGRKVGFTKPCNNCWVDNIKCTFQSCKFTCLKYKLFGESNNSDDGNLNSCLQCDERMCGPEFLSCSGANRRRMGVVSDIGRDQDSEQCKVTD 136
BLAST of mRNA_P-wetherbeei_contig7299.1.1 vs. uniprot
Match: A0A813LMN6_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813LMN6_POLGL) HSP 1 Score: 153 bits (387), Expect = 4.460e-40 Identity = 72/157 (45.86%), Postives = 94/157 (59.87%), Query Frame = 3
Query: 69 VCGHNHVSYESKEAAVLAGATVMHCGNCGKCSNRDDIDIYERTKDTLTYTTTRCAYAYLVLGRWAAAACMRRSVGFTDSCNECWLDNIECDMRECLWICLKHTLAGSANNLEGE-ELNACLACDEEQCGPVFIQCAGANRRRSGIISDIGRPNEQVC 536
VCG + ++ S A AG V++CG CG CS DI +Y T +TLT TRCA + +LG C + + FT C +CW++N+ CD R C W CL+ L G N G+ +LN CL CDEE CGP F +CA ANRR SG++SDIGR + Q C
Sbjct: 131 VCGASGQTHVSLLLARAAGDEVVNCGACGACSTSHDISVYSSTLETLTDKATRCAL-WSLLGEGGVRDCFAQQIQFTKPCEDCWVENVMCDQRNCKWTCLQMVLTGQRKNAGGDGKLNDCLECDEELCGPAFYRCARANRRTSGLVSDIGRKSVQNC 286
BLAST of mRNA_P-wetherbeei_contig7299.1.1 vs. uniprot
Match: A0A835T1V2_CHLIN (Uncharacterized protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835T1V2_CHLIN) HSP 1 Score: 150 bits (378), Expect = 5.810e-40 Identity = 75/165 (45.45%), Postives = 95/165 (57.58%), Query Frame = 3
Query: 60 EGRVCGHNHVSYESKEAAVLAGATVMHCGNCGKCSNRDDIDIYERTKDTLTYTTTRCAYAYLVLGRWAAAACMRRSVGFTDSCNECWLDNIECDMRECLWICLKHTL----AGSANNLEGEEL--NACLACDEEQCGPVFIQCAGANRRRSGIISDIGRPNEQVC 536
+ RVCG + V+Y AA LAG V++CG CG+CSN D+ +Y T LT C L R A +GF+ C C+ NI+CD R CLW CL++TL +G + E L N CLACDE CGP F+ CAGANRRR+GI+SDIGR +VC
Sbjct: 17 DARVCGVDGVTYAHPSAAALAGVAVLNCGACGECSNEQDVGVYLATAADLTVRVRACGMRLLAKRRDRCLA----DLGFSPGCAACFAANIDCDRRHCLWPCLRYTLRSWFSGPPRGGQQETLGSNPCLACDERVCGPAFLACAGANRRRAGIVSDIGRSGAEVC 177
BLAST of mRNA_P-wetherbeei_contig7299.1.1 vs. uniprot
Match: A0A814ZM29_9BILA (Hypothetical protein n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A814ZM29_9BILA) HSP 1 Score: 148 bits (373), Expect = 4.660e-38 Identity = 65/154 (42.21%), Postives = 94/154 (61.04%), Query Frame = 3
Query: 72 CGHNHVSYESKEAAVLAGATVMHCGNCGKCSNRDDIDIYERTKDTLTYTTTRCAYAYLVLGRWAAAACMRRSVGFTDSCNECWLDNIECDMRECLWICLKHTLAGSANNLEGEELNACLACDEEQCGPVFIQCAGANRRRSGIISDIGRPNEQV 533
CG + ++Y ++EAA G +H G CG CS+ +DI+I+ T++ +T +T+CA Y++ G+ +A CM + + C ECW++N+ CD +CL +C + N LN CLACDE CG FI CAGANRRRSGI SDI RP + +
Sbjct: 129 CGADGINYPTQEAACTNGTYALHGGYCGACSSHEDINIFNITRNNMTSISTKCAVKYVLFGKNSATKCMTNTAALSVECTECWVENMGCDAAQCLTLCAIDRILHVNNTKPDGSLNDCLACDEGYCGKPFIVCAGANRRRSGITSDIDRPQDTI 282 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7299.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7299.1.1 >prot_P-wetherbeei_contig7299.1.1 ID=prot_P-wetherbeei_contig7299.1.1|Name=mRNA_P-wetherbeei_contig7299.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=197bp MHCGNCGKCSNRDDIDIYERTKDTLTYTTTRCAYAYLVLGRWAAAACMRRback to top mRNA from alignment at P-wetherbeei_contig7299:140..1341+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7299.1.1 ID=mRNA_P-wetherbeei_contig7299.1.1|Name=mRNA_P-wetherbeei_contig7299.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1202bp|location=Sequence derived from alignment at P-wetherbeei_contig7299:140..1341+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7299:140..1341+ >mRNA_P-wetherbeei_contig7299.1.1 ID=mRNA_P-wetherbeei_contig7299.1.1|Name=mRNA_P-wetherbeei_contig7299.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=591bp|location=Sequence derived from alignment at P-wetherbeei_contig7299:140..1341+ (Phaeothamnion wetherbeei SAG_119_79)back to top |