mRNA_P-wetherbeei_contig7281.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7281.1.1 vs. uniprot
Match: A0A5J4Z2P4_PORPP (tRNA (Guanine(10)-N2)-methyltransferase-like n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z2P4_PORPP) HSP 1 Score: 134 bits (338), Expect = 6.330e-32 Identity = 109/284 (38.38%), Postives = 137/284 (48.24%), Query Frame = 1
Query: 1 RQLALGPAVGGQGVMST--TARRPRAGWLRRYALSSRPFLAATAMEPELAFLMANLARPXXXXXXXXXXXVLDPFCGSASILLAAARLGASATIGSDVDADALDFDGVCANFAVAGLSPPPRLFVADVT--AEASPLM------ELRVDAIVTDPPYEMRAKSRLDGLNRNHQRGGGENSTEDGGTGDRGFSSRDAEFDAVTAADHAVDTVVLRLLRLASRVLNPGGRLVFFWPDSNVAIDHAAGDDKSVPWRGRLPDSFRLVCAGEQRFSPTFSRWLVVLEKV 822
R L GPA G Q V+ +RR R+G L + AL RPF A T MEPELA LMA+LA VLDPFCGS S+LLAA+ GA +G DV+ + GV ANF GL P L+ A+V + SP R + I++DPPY MRA ++ D D G S D ++ A T RL +A +L+ GGRLV F PD ++ A D L D RL+ Q FSPTF RWLVV+EK+
Sbjct: 804 RLLCRGPAAGHQDVLGLGHRSRRARSGILAKLALKDRPFCAPTTMEPELALLMASLA------LASPGKTVLDPFCGSCSLLLAASVQGAEYVVGVDVECGTSNVQGVVANFEQLGLRAP-LLYEANVLDGRDRSPCFAAWAEPNTRYNCIISDPPYGMRAGVQV----------------HDQDVNDDGPVSND---ESPLYYQGAAGTATRRLCEIARDLLSVGGRLVCFVPDWRTSLYEFAPDVV-------LHDGLRLIACYPQVFSPTFRRWLVVIEKM 1054
BLAST of mRNA_P-wetherbeei_contig7281.1.1 vs. uniprot
Match: A0A7S2JLU4_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2JLU4_9EUKA) HSP 1 Score: 114 bits (286), Expect = 1.090e-26 Identity = 101/296 (34.12%), Postives = 135/296 (45.61%), Query Frame = 1
Query: 4 QLALGPAVGGQGVMSTTARRPRAGWLRRYALSSRPFLAATAMEPELAFLMANLARPXXXXXXXXXXXVLDPFCGSASILLAAARLGASATIGSDVDADALDFDGVCANFAVAGLSPPPRLFVADVTAEA-SPLM--ELRVDAIVTDPPYEMRAKSRLDGLNRNHQRGGGENSTEDGGTGDRGFSSRDAEFDAVTAADHAVDTVVLRLLRLASRVLNPGGRLVFFWPDSNVAIDHAAGD--DKSVPWRGRLPDSFRLVCAGEQRFSP-------------------TFSRWLVVLEK 819
++A GPA G RR GWL +YAL R AATAMEPE+AFLMAN AR VLDP CGS +LL+AA LGA+ +G D++ A F+GV A+F+ L P P+L DV A +P + + DAIV DPPY ++A + G A+ + AAD + +L LA+R L PGGRLV F P + + + +P P + R+V QRFS F+RWL+ LE+
Sbjct: 31 RVASGPAAGPGAPGVAQGRRCYTGWLGQYALKQRRHAAATAMEPEIAFLMANWAR------ISAASRVLDPTCGSCGLLLSAAVLGATQLVGIDMNRSA--FEGVAADFSRMAL-PAPKLVCGDVLAPRHTPELASDALYDAIVCDPPYNLQAPVFVQGS---------------------------AQTGPLAAAD-----LTSAVLGLAARALTPGGRLVLFVPARGAEVSLTLEELLARRMPPAAHRP-ALRIVYGRLQRFSTRRSRRAGSSATPRASRGPGAFARWLICLER 284
BLAST of mRNA_P-wetherbeei_contig7281.1.1 vs. uniprot
Match: D7G924_ECTSI (UPF0020 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G924_ECTSI) HSP 1 Score: 114 bits (284), Expect = 5.200e-25 Identity = 116/322 (36.02%), Postives = 145/322 (45.03%), Query Frame = 1
Query: 1 RQLALGPAVGGQGVMSTTA--RRPRAGWLRRYALSSRPFLAATAMEPELAFLMANLARPXXXXXXXXXXXVLDPFCGSASILLAAARLGASATIGSDVD-------------------------ADALDFDGVCANFAVAGLSPPPRLFVADVTAEASPLMELRV-DAIVTDPPYEMRAKSRLDGL----NRNHQRGG------GENST-----EDGGTGDRGFSSRDAEFDAVTAADHAVDTVVLRLLRLASRVLNPGGRLVFFWP--DSNVAIDHAAGDDKSVPWRGRL---PDSFRLVCAGEQRF-SPTFSRWLVVLEK 819
R+L LG AVG G + T RRP G L AL+ R TA+EPE+A +MANLA+ VLDPFCGS S+LL AA +GA T GSDV AD DF+ + +F G++ P L ADV E SP+ DAIVTDPPY ++AK L + H+ G G +ST E G G +R A +A V V+ LL LA L PGGRL FF P + +D +G L P +V +QR SP RWL+VLEK
Sbjct: 220 RELQLGAAVGVGGTVMATGCGRRPTRGVLGALALNRRRCRGPTAIEPEVALIMANLAK------VRPGSRVLDPFCGSCSLLLPAAHMGAK-TWGSDVSGPATASEEAGALVGGDTGAEGGVRQADREDFEQIYQDFQALGVAAP-TLVAADVGDEESPVRRPEFYDAIVTDPPYNIKAKVVTTSLATKTSGRHEEAGSVLPAAGIDSTAHAASEAGSEWKAGGGAR-----AEASAKDLVGKVIWSLLALARSSLKPGGRLCFFLPLRGAEARLDRLPTGLLEKMSQGDLAGDPARLAVVYTTKQRMTSPNMCRWLIVLEK 528
BLAST of mRNA_P-wetherbeei_contig7281.1.1 vs. uniprot
Match: W7TUM5_9STRA (Trna guanosine-2-o-methyltransferase trm11 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TUM5_9STRA) HSP 1 Score: 108 bits (270), Expect = 3.740e-23 Identity = 93/295 (31.53%), Postives = 134/295 (45.42%), Query Frame = 1
Query: 4 QLALGPAVGGQGVMSTTARRPRAGWLRRYAL--SSRPFLAATAMEPELAFLMANLARPXXXXXXXXXXXVLDPFCGSASILLAAARLGASATIGSDVDADALDFDG------VCANFA---------VAGL-SPPPRLFVADVTA-EASPLMELRV-DAIVTDPPYEMRAKSRLDGLNRNHQRGGGENSTEDGGTGDRGFSSRDAEFDAVTAADHAVDTVVLRLLRLASRVLNPGGRLVFF---WPDSNVAIDHAAGDDKSVPWRGRLPDSFRLVCAGEQRFSPTFSRWLVVLEK 819
+LA GP G ++ RRPR+G L+ A F++ TAM+PELA++M N+ V DPF GS S+L A+ LGA GSD + + + + +FA V L SP P L AD+ + + PL D+IVTDPPY ++AK G + + A TA + V+ L+ +A+ VL PGGRLVFF W ++ + + + R P +F++V Q FSP+F+RWLV LEK
Sbjct: 255 RLAQGPGTGKGYTFASKPRRPRSGVLKALAAYREKATFISPTAMDPELAWVMNNMG------GVRKRSRVFDPFMGSGSLLFTASLLGAEELFGSDAAQELMGGESRVNKQLIIKSFAYDKNDFSQWVDSLTSPVPVLTQADILSRQLHPLFRSGYYDSIVTDPPYNIKAKVF-------------------------GKAETATDTKAATARQQTIIPVIFALIDIAASVLVPGGRLVFFLPEWTKQDIGCNKKSDANILSYMLSRTPKAFKVVFTLPQTFSPSFTRWLVCLEK 518
BLAST of mRNA_P-wetherbeei_contig7281.1.1 vs. uniprot
Match: K0R723_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R723_THAOC) HSP 1 Score: 104 bits (260), Expect = 8.980e-22 Identity = 101/293 (34.47%), Postives = 138/293 (47.10%), Query Frame = 1
Query: 1 RQLALGPAVGGQGVMSTTARRPRAGWLRRYALSSRPFLAA---------TAMEPELAFLMANLARPXXXXXXXXXXXVLDPFCGSASILLAAARLGASATIGSDVDADALDFDGVCANFAVAGLSPPP-RLFVADVTAEASPLMELR----VDAIVTDPPYEMRAKSRLDGLNR---NHQRGGGENSTEDGGTGDRGFSSRDAEFDAVTAADHAVDTVVLRLLRLASRVLNPGGRLVFFWPDSNVAIDHAAGDDKSVPWRGRLPDSFRLV---CAGEQRFSPTFSRWLVVLEK 819
R+ A+G A G +G S RR G L+R+AL R + A TAMEPE+AFLMA+LA +LDP CGS S+LL+AA LGA+ IG D+D+ D + + V G P LFV + + L +D +V DPPY + A + G +R NH +G + SR + V AD D V + +A RVL GGRLV F P + + + + DS ++ C+ QRFSPTFSRWL+ +EK
Sbjct: 259 RRTAIGLA-GNKGAPSRALRRTNRGVLKRFALKERQAIVASKKERSNISTAMEPEIAFLMASLALDGLRANGGSTT-ILDPCCGSGSLLLSAAALGATHLIGVDLDSAVWDENEFRRHQTVFGSRPLAIPLFVCGDVSNPTRTRVLSESDSIDCVVCDPPYNIGAPVIIKGKDRRPVNHHM-----------SGQQIVGSR-KDSQVVERADLVPDLVPY-IFDVAQRVLVKGGRLVMFVPARGYEATLSLEELVHLKLGNGVFDSNLVLLNDCSRLQRFSPTFSRWLMCMEK 536
BLAST of mRNA_P-wetherbeei_contig7281.1.1 vs. uniprot
Match: A0A0D6R2X9_ARACU (UPF0020 domain-containing protein n=1 Tax=Araucaria cunninghamii TaxID=56994 RepID=A0A0D6R2X9_ARACU) HSP 1 Score: 98.2 bits (243), Expect = 1.370e-19 Identity = 94/257 (36.58%), Postives = 124/257 (48.25%), Query Frame = 1
Query: 79 LRRYALSSRPFLAATAMEPELAFLMANLARPXXXXXXXXXXXVLDPFCGSASILLAAARLGASATIGSDVDADALDFDG------VCANFAVAGLSPPPRLFVAD--VTAEASPLMELRVDAIVTDPPYEMRAKSRLDGLNRNHQRGGGENSTEDGGTGDRGFSSRDAEFDAVTAADHAVDTVVLRLLRLASRVLNPGGRLVFFWPDSNVAIDHAAGDDKSVPWRGRLPDS--FRLVCAGEQRFSPTFSRWLVVLEK 819
L YALS R +L TAM+ E+AFLMAN A V DPF G+ SIL+AAA GA T+G+D+D + DG V +NF GL PP L AD + L E+ DAI+ DPPY +RA R G + + G G + A ++++ V LL +A+R+L GGRLVFF+P +A+D A D PD F LV EQ S +SR L+ +EK
Sbjct: 182 LPTYALSKRKYLGPTAMDAEIAFLMANQA------LVQPGKLVYDPFVGTGSILVAAAHFGAM-TMGTDIDIRVVR-DGRGPDCNVWSNFKQYGLPPPISLIRADNNLPPWRGDLQEV-CDAIICDPPYGVRAGGRKSGGRKLLK----------GLIGPYVIPDEKRRDHIPSTAFYSLEECVHDLLDMAARLLVMGGRLVFFYP---LAVDEDAKDI--------FPDHKCFTLVSHSEQILSTRYSRCLLTMEK 408
BLAST of mRNA_P-wetherbeei_contig7281.1.1 vs. uniprot
Match: A0A7S2SDE9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SDE9_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 1.500e-19 Identity = 80/216 (37.04%), Postives = 104/216 (48.15%), Query Frame = 1
Query: 37 GVMSTTARRPRAGWLRRYALSSRPFLAATAMEPELAFLMANLARPXXXXXXXXXXXVLDPFCGSASILLAAARLGASATIGSDVDADALDF--DGVCANFAVAGLSPPPRLFVADVTAE--ASPLMELRVDAIVTDPPYEMRAKSRLDGLNRNHQRGGGENSTEDGGTGDRGFSSRDAEFDAVTAADHAVDTVVLRLLRLASRVLNPGGRLVFFWP 672
G+ S RRPRAG L ++AL R AT MEPELAF+MAN+ VLDPFCG+A +LL A LGA+ +G D + + L+ V + A+ GL P L ++ A P EL D ++TDPPY + A+ DG R EN +D F+ A A + L+ LA L PGGRLVFF P
Sbjct: 1 GIFSVAPRRPRAGVLLKFALHRRRARVATTMEPELAFMMANMG------GVQAGSRVLDPFCGAAGLLLPALHLGAARAVGLDANRETLETLAPEVERDCAMLGLQGRPDLLCTPISGAGLALPGDEL-FDVVLTDPPYGIGARIE-DGAAR-QDTAAAENDVQDPRNATSDFAL------APEARGKGAAALCAELVELAEARLRPGGRLVFFLP 201
BLAST of mRNA_P-wetherbeei_contig7281.1.1 vs. uniprot
Match: UPI0010A40AB3 (tRNA (guanine(10)-N2)-methyltransferase homolog isoform X1 n=3 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A40AB3) HSP 1 Score: 96.3 bits (238), Expect = 6.620e-19 Identity = 90/256 (35.16%), Postives = 123/256 (48.05%), Query Frame = 1
Query: 88 YALSSRPFLAATAMEPELAFLMAN--LARPXXXXXXXXXXXVLDPFCGSASILLAAARLGASATIGSDVDADALDFDG------VCANFAVAGLSPPPRLFVADVTAEA-SPLMELRVDAIVTDPPYEMRAKSRLDGLNRNHQRGGGENSTEDGGTGDRGFSSRDAEFDAV-TAADHAVDTVVLRLLRLASRVLNPGGRLVFFWPDSNVAIDHAAGDDKSVPWRGRLPDSFRLVCAGEQRFSPTFSRWLVVLEKVG 825
Y L SR +L TAM+ E+AFLMAN LA P + DPF G+ SIL+AAA GA T+G+D+D + DG V +NF GL P L AD + P ++ DAI+ DPPY +RA R G + + G + D D + + A +++ V LL LA+R+L PGGRLVFF+P +D S FRL+ + EQ S +SR L+ + K G
Sbjct: 198 YQLKSRTYLGPTAMDAEMAFLMANQALATPGKL--------IYDPFVGTGSILVAAAHFGAM-TMGADIDIRVVR-DGRGPDCNVWSNFKQYGLPMPIGLLRADNNLPSWRPGLKEVFDAIICDPPYGVRAGGRKSGGRKLLK-----------GVVEPYIVPDDKRTDHIPSTASYSLVECVHDLLDLAARMLVPGGRLVFFYP--------VLREDDSAETHFPEHPCFRLISSSEQILSSRYSRVLLTMVKTG 424
BLAST of mRNA_P-wetherbeei_contig7281.1.1 vs. uniprot
Match: A0A660KQJ4_9ROSI (UPF0020 domain-containing protein n=1 Tax=Carpinus fangiana TaxID=176857 RepID=A0A660KQJ4_9ROSI) HSP 1 Score: 95.9 bits (237), Expect = 8.680e-19 Identity = 91/258 (35.27%), Postives = 122/258 (47.29%), Query Frame = 1
Query: 79 LRRYALSSRPFLAATAMEPELAFLMAN--LARPXXXXXXXXXXXVLDPFCGSASILLAAARLGASATIGSDVDADALDFDG------VCANFAVAGLSPPPRLFVADVTAEA-SPLMELRVDAIVTDPPYEMRAKSRLDGLNRNHQRGGGENSTEDGGTGDRGFSSRDAEFDAV-TAADHAVDTVVLRLLRLASRVLNPGGRLVFFWPDSNVAIDHAAGDDKSVPWRGRLPDSFRLVCAGEQRFSPTFSRWLVVLEKV 822
L Y L SR +L TAM+ E+AFLMAN LA P V DPF G+ SIL+AAA GA T+G+D+D + DG V +NF GL P L AD P ++ DAI+ DPPY +RA R G + + GT D D D + + A + + V LL LA+++L GGRLVFF+P DD +V F+L+ EQ S +SR L+ + K+
Sbjct: 185 LPTYQLKSRTYLGPTAMDAEMAFLMANQALATPGKL--------VYDPFVGTGSILIAAAHFGAM-TMGADIDIRVVR-DGRGPDCNVWSNFKQYGLPMPIALLRADNNLPPWRPGLKEVFDAIICDPPYGVRAGGRKSGGRKLLK-----------GTVDPYTVPDDKRTDHIPSTASYCLAECVHDLLDLAAKMLRMGGRLVFFYP--------VLRDDDNVETHFPEHPCFKLIATSEQILSSRYSRVLLTMVKI 413
BLAST of mRNA_P-wetherbeei_contig7281.1.1 vs. uniprot
Match: A0A2I4FN97_JUGRE (tRNA (Guanine(10)-N2)-methyltransferase homolog n=5 Tax=Juglandaceae TaxID=16714 RepID=A0A2I4FN97_JUGRE) HSP 1 Score: 95.9 bits (237), Expect = 8.940e-19 Identity = 93/259 (35.91%), Postives = 126/259 (48.65%), Query Frame = 1
Query: 79 LRRYALSSRPFLAATAMEPELAFLMAN--LARPXXXXXXXXXXXVLDPFCGSASILLAAARLGASATIGSDVDADALDFDG------VCANFAVAGLSPPPRLFVADVTAEA-SPLMELRVDAIVTDPPYEMRAKSRLDGLNRNHQRGGGENSTEDGGTGDRGFSSRDAEFDAV-TAADHAVDTVVLRLLRLASRVLNPGGRLVFFWPDSNVAIDHAAGDDKSVPWRGRLPDSFRLVCAGEQRFSPTFSRWLVVLEKVG 825
L Y L SR +L TAM+ E+AFLMAN LA P V DPF G+ SIL+AAA GA T+G+D+D + DG V +NF GL P L AD P ++ DAI+ DPPY +RA R G + + GT D D D + + A +++ V LL LA+R++ GGRLVFF+P V + +D P F+L+ A EQ S +SR L+ + K+G
Sbjct: 192 LPTYQLKSRTYLGPTAMDAEIAFLMANQALATPGKL--------VYDPFVGTGSILIAAAHFGAM-TMGADIDIRVVR-DGRGPDCNVWSNFKQYGLPMPIALLRADNNLPPWRPGLKEIFDAIICDPPYGVRAGGRKSGGRKLLK-----------GTVDPYTVPDDKRTDHIPSTAAYSLVECVHDLLDLAARMIVMGGRLVFFYP---VLREDDYVEDHHYPEH----PCFKLIAASEQILSSRYSRVLLTMVKIG 422 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7281.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7281.1.1 >prot_P-wetherbeei_contig7281.1.1 ID=prot_P-wetherbeei_contig7281.1.1|Name=mRNA_P-wetherbeei_contig7281.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=276bp RQLALGPAVGGQGVMSTTARRPRAGWLRRYALSSRPFLAATAMEPELAFLback to top mRNA from alignment at P-wetherbeei_contig7281:1456..2511+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7281.1.1 ID=mRNA_P-wetherbeei_contig7281.1.1|Name=mRNA_P-wetherbeei_contig7281.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1056bp|location=Sequence derived from alignment at P-wetherbeei_contig7281:1456..2511+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7281:1456..2511+ >mRNA_P-wetherbeei_contig7281.1.1 ID=mRNA_P-wetherbeei_contig7281.1.1|Name=mRNA_P-wetherbeei_contig7281.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=828bp|location=Sequence derived from alignment at P-wetherbeei_contig7281:1456..2511+ (Phaeothamnion wetherbeei SAG_119_79)back to top |