mRNA_P-wetherbeei_contig7280.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7280.2.1
Unique NamemRNA_P-wetherbeei_contig7280.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig7280.2.1 vs. uniprot
Match: D7G2K8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2K8_ECTSI)

HSP 1 Score: 300 bits (769), Expect = 1.340e-88
Identity = 172/354 (48.59%), Postives = 224/354 (63.28%), Query Frame = 1
Query:    1 AGLLKACESSGYAIREPQPSEIRPELFDFQRSTVQWMLDRERDEAGINGFFWQRRDWADTAEAGGSPLYYFPLAGEFRLTRPPLVRGGLLAEEMGLGKTVEILSLIVRNRRVIPADAEL-------DSHGRPVDDRGRLLSRGTLIVVPVTLVGQWRDEVAAAAAMPVSATAAATLLGGHVGAAPIAISKLLAAIASTGGDGVAAGDDAVXXXXAVA-----ISEAEVIVTYKLEGVL-HEMDVILTTYDSLRCEGRL-KKINWHRVILDECQEIKTATTQVATLCQALHAENRWMVSGTPLASSINDLHGELAFLGVWPFSLQNDGFWEGKVAAPYRSRSEEGLDLLLALLRV 1020
            AG+LK+ ESSGY + +PQP+++  +LF +Q+S+ QWMLD ERD  G+NG+FW+RR+WAD    GG+PL+YFPLAGEFRL  PP + GGLL EEMGLGKT+E+LS I+ N R   + + L       +   R  D   RL+SR TLIVVPV+LVGQW +      A  V       L      +    ++   A+ AS             XXXXA A       +  V V +K++  L  + DV+LTTY+ LR    L +KIN+HR +LDECQEIKTATT +A +CQ + A +RWMVSGTP+A  I+ LHGEL FL VWPFSLQNDGFWE KV  P+ ++    L+LL AL+ V
Sbjct:  283 AGILKSAESSGYRVVDPQPADLTVDLFPYQQSSCQWMLDHERDPRGLNGYFWERREWAD----GGAPLWYFPLAGEFRLAEPPHITGGLLCEEMGLGKTIEVLSTILANPRDGGSHSSLKHRKSLREQPDRHFDSARRLVSRATLIVVPVSLVGQWAEGHVELTADQVRRIENRRLFDSDRSSDDANLTARAASTASXXXXXXXXXXXXXXXXXAAAEAARGAEDETVRVDFKVDAALVADNDVVLTTYELLRTRKSLFQKINFHRCVLDECQEIKTATTNIAQMCQQVKASHRWMVSGTPIAGKIDSLHGELNFLQVWPFSLQNDGFWEKKVGEPFEAKDYGALELLRALIGV 632          
BLAST of mRNA_P-wetherbeei_contig7280.2.1 vs. uniprot
Match: A0A4D9CZ02_9STRA (Helicase ATP-binding domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZ02_9STRA)

HSP 1 Score: 231 bits (588), Expect = 4.820e-65
Identity = 166/456 (36.40%), Postives = 220/456 (48.25%), Query Frame = 1
Query:    4 GLLKACESSGYAIREPQPSEIRPELFDFQRSTVQWMLDRERDEAGINGFFWQRRDWADTAEAGGSPLYYFPLAGEFRLTRPPLVRGGLLAEEMGLGKTVEILSLIVRNRRVIPADAELDSHGRPVDD-----------------RGRL-------------------------------------------LSRGTLIVVPVTLVGQWRDEV---AAAAAMPV---------------------------SATAAATLLGGHVGAAPIAIS--KLLAAIASTGGDGVAAGD-----------------DAVXXXXAVAISEAEVIVTYKLE-----GVLHEMDVILTTYDSLRCEG---RLKKINWHRVILDECQEIKTATTQVATLCQALHAENRWMVSGTPLASSINDLHGELAFLGVWPFSLQNDGFWEGKVAAPYRSRSEEGLDLLLALLRV 1020
            GLL A ES+GYA+R+PQP  +   +F+FQRST+QWMLDRER  + +N +FW+RR W D AE      YYFP AGE RL +PP   GG+L EEMGLGKTVE L+LI+ N  +      +D  G   D+                 RG L                                            SR TLIVVP TL+ QW  EV     A A+                             S  +AA L  G +  AP+ ++  +     A  G  G A+                   ++      + + +  +  T +L        + + D+++TTYD+LR       L++++WHRVILDECQEI+T+T+ +A LC  LHA +RWMVSGTPL +S++DL GEL FL V PFSL NDGFWE KV  P+R R E  L LL  L+ V
Sbjct:  406 GLLHAAESTGYAVRDPQPRGLTVSMFEFQRSTLQWMLDRERGPS-LNEYFWERRAWKD-AETAEECFYYFPDAGELRLEKPPHRTGGVLCEEMGLGKTVECLALILANP-LAAKGGRVDERGASGDEEKGDSPWAGGGDAVSASRGDLGGQEGRRXXXXXXXXXXLAQGTGGAGAEGWKGDGLEEEDLTGRPSRATLIVVPGTLLNQWMMEVRKTTEAGALEALVFRGNVKVTKSLRELRRISREGWVGSSIPSAAELPVGELVWAPVCLTPDRENQGSARQGTAGPASSSPTHPAASLRDPDRRRLRESYQRAKVLKVMDGPLGATVELRYWYERNEVWDADLVITTYDALRNANGGPMLRQVHWHRVILDECQEIRTSTSAIARLCSVLHATHRWMVSGTPLFASVDDLFGELQFLAVSPFSLANDGFWEAKVGGPWRRREESALRLLHLLVSV 858          
BLAST of mRNA_P-wetherbeei_contig7280.2.1 vs. uniprot
Match: C1EH46_MICCC (SNF2 super family n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1EH46_MICCC)

HSP 1 Score: 216 bits (551), Expect = 2.080e-59
Identity = 150/412 (36.41%), Postives = 194/412 (47.09%), Query Frame = 1
Query:    4 GLLKACESSGYAIREPQPSEIRPELFDFQRSTVQWMLDRERDEAGINGFFWQRRDWADTAEAGGSPLYYFPLAGEFRLTRPPLVRGGLLAEEMGLGKTVEILSLIVRNRRVIPADAE--------------------------LDSHGR----------------------PVDDRGRLLSRGTLIVVPVTLVGQWRDEVAAAAAMPVSATAAATL-LGGHVGAAPIAISKLLAAIASTGGDGVAAGDDAVXXXXAVAISEAEVIVTYKLEGVLHEMDVILTTYDSLRCEGR-----------------------LKKINWHRVILDECQEIKTATTQVATLCQALHAENRWMVSGTPLASSINDLHGELAFLGVWPFSL--QNDGFWEGKVAAPYRSRSEEGLDLLLALLR 1017
            GLL A  S GY    P P  +   L DFQR T+ WM D+ER E G+NG FW+ R WAD     G   +YFPLAGE RL+ PPLVRGG+L+EEMGLGKT+E+L+L+  +     A  E                          L+  G                         D  G + SR TLI+VP  L+ QW  E A             T+ +G H G                GG G               +SE E      L   L + DV+L TY SL+ E +                       L +++W RV+LDECQ ++++TTQ+A  C+ L A+ RWMVSGTPL   ++DL+GELAFLGVWPF L  Q DGFW  +V  P+ ++  + L LL ALLR
Sbjct:  329 GLLAAAVSDGYD-ECPTPPNLALPLMDFQRQTLAWMRDKERSERGLNGVFWEERRWAD-----GGKYWYFPLAGELRLSEPPLVRGGMLSEEMGLGKTLEVLALVSADADAARAAVEAKTAAAKEEPXXXXXXXXXXXXXXDRLNGKGSRNADHPDXXXXXXXXXXXXXXXXXDRDGLIPSRATLIIVPPPLLRQWEAECA-------KCVRPGTMKIGIHSGR-------------GRGGRGAPR-----------QVSERE------LASKLADNDVVLATYPSLQKEAKKRRRETGTGDGASAPRNERAQKILSRVSWRRVVLDECQMVRSSTTQLAVACRCLVADFRWMVSGTPLHGGVDDLNGELAFLGVWPFCLSDQTDGFWAHRVGRPWAAKDPDALPLLHALLR 697          
BLAST of mRNA_P-wetherbeei_contig7280.2.1 vs. uniprot
Match: A0A0G4IL78_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IL78_PLABS)

HSP 1 Score: 207 bits (526), Expect = 4.330e-56
Identity = 130/344 (37.79%), Postives = 182/344 (52.91%), Query Frame = 1
Query:    7 LLKACESSGYAIREPQPSEIRPELFDFQRSTVQWMLDRERDEAGINGFFWQRRDWADTA--EAGGSPLYYFPLAGEFRLTRPPLVRGGLLAEEMGLGKTVEILSLIVRNRRVIPADAELDSHGRPVDDR---GRLL-SRGTLIVVPVTLVGQWRDEVAAAAAMPVSATAAATLLGGHVGAAPIAISKLLAAIASTGGDGVAAGDDAVXXXXAVAISEAEVIVTYKLEGVLHEMDVILTTYDSLRCEGRLKKINWHRVILDECQEIKTATTQVATLCQALHAENRWMVSGTPLASSINDLHGELAFLGVWPFSLQN--DGFWEGKVAAPYRSRSEEGLDLLLALL 1014
            LL A E  GYA+ E QP  +  ++ D+Q  T++WM DRE    G+N  FW++R W+D +  +A     YY P  GE RL  P +VRGGLL EEMGLGKT+E+++LI+ ++        L   G  V       RL  S+ TLIVVP  LV QW  E+                +   V +  +   ++       G      G   +     VA   A          +    D+++TTY +L  +  L+KI W R++LDE QEI+++TT++A  C++L  + RWMVSGTPL SSINDL+GEL FL V PF L +  DGFW  ++  P+  R  + L LL  LL
Sbjct:  257 LLAAHEDQGYAMTE-QPPGLDMQMMDYQLQTLRWMQDRETIPRGLNSMFWEKRRWSDVSGGDADADTFYYMPSTGELRLEAPAVVRGGLLCEEMGLGKTLEVVALILWSK--------LKGRGASVARNYPGARLYKSQATLIVVPAPLVSQWETEII-------------KYVQPGVLSVFVHSERIHGRCTVDGKRECPPGSSCIGQARHVANRSA---------ALASAADIVITTYKTLLDDACLQKIAWKRIVLDEMQEIRSSTTELAVACRSLQCDLRWMVSGTPLFSSINDLNGELNFLAVMPFCLNDNDDGFWGARIGRPWAQREPDALKLLHTLL 569          
BLAST of mRNA_P-wetherbeei_contig7280.2.1 vs. uniprot
Match: A0A7S0DGF1_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DGF1_9EUKA)

HSP 1 Score: 202 bits (514), Expect = 1.310e-55
Identity = 138/353 (39.09%), Postives = 183/353 (51.84%), Query Frame = 1
Query:    1 AGLLKACESSGYAIREPQPSEIRPELFDFQRSTVQWMLDRER-DEAGINGFFWQRRDWADTAEAGGSPLYYFPLAGEFRLTRPPLVRGGLLAEEMGLGKTVEILSLIVRNRRVIPADAELDSHGRPVDDRGRLLSRG---------TLIVVPVTLVGQWRDEVAAAAAMPVSATAAATLLGGHVGAAPIAISKLLAAIASTGGDGVAAGDDAVXXXXAVAISEAEVIVTY------KLEGVLHEMDVILTTYDSLRCEGR---LKKINWHRVILDECQEIKTATTQVATLCQALHAENRWMVSGTPLASSINDLHGELAFLGVWPFSLQN--DGFWEGKVAAPY----RSRSE 984
            AGLLKA E SGY    PQP ++   L  +QR T+ WM D E     G+N  FW+ R W D    GGS  YYFP AGE RL RPP VRGGLL EEMGLGKT+E++SLIV + +     +   S     D    +  R          TL++VP+TL+ QW  E+              T++G                    G DG    +          + E ++I  Y      K+  +    DV+L TY +L  +     L+KI W RV+LDE QE++++TT++A  C  L A+ RWMVSGTP  +SI+DL+GEL FLGV PF L +  DGFWE ++  P+    RSR E
Sbjct:  313 AGLLKAHEHSGYR-EAPQPRDVSLTLKTYQRQTLAWMQDHESLPNMGLNSLFWEERQWLD----GGS-YYYFPAAGELRLERPPTVRGGLLCEEMGLGKTLEMVSLIVTDLQKNSLGSYSKSPTPNFDSMECVTERDKTQEFESDTTLVIVPLTLLDQWIRELKKC-----------TIVG-------------------RGEDGK---EKHALRISHYPLDEGDIITRYSQTKSLKIAKLSTRADVLLVTYKTLAMQHSHKILQKIRWRRVVLDEMQEVRSSTTELARACANLKAQFRWMVSGTPFYTSIDDLNGELNFLGVQPFCLSDRIDGFWERRIKGPWIKAGRSRGE 626          
BLAST of mRNA_P-wetherbeei_contig7280.2.1 vs. uniprot
Match: A0A7S3SF79_EMIHU (Hypothetical protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3SF79_EMIHU)

HSP 1 Score: 204 bits (519), Expect = 3.950e-55
Identity = 133/344 (38.66%), Postives = 176/344 (51.16%), Query Frame = 1
Query:    4 GLLKACESSGYAIREPQPSEIRPELFDFQRSTVQWMLDRERDEA----GINGFFWQRRDWADTAEAGGSPLYYFPLAGEFRLTRPPLVRGGLLAEEMGLGKTVEILSLIVRNRRVIPADAELDSHGRPVDDRGRLLSRGTLIVVPVTLVGQWRDEVAAAAAMPVSATAAATLLGGHVGAAPIAISKLLAAIASTGGDGVAAGDDAVXXXXAVAISEAEVIVTYKLEGVLHEMDVILTTYDSL-RCEGRLKKINWHRVILDECQEIKTATTQVATLCQALHAENRWMVSGTPLASSINDLHGELAFLGVWPFSLQN-DGFWEGKVAAPYRSRSEEGLDLLLALLR 1017
            G+LK+CE +GY   E QP+ I+  L  +Q   + WMLD E D A    G+NG FWQ R +      G    +Y P   E RL  PPL+ GGLL EEMGLGKT+E+ SL+V +   +P +A            G+  SR TLI+VP  L+ QW  E+A        AT + ++L                                        + E   +     E   H  DV+LTTY  L + +  L  + W RV+LDE QE+  AT+++A  C+ALHA  RWMVSGTPL+SSI+DL GELAFL + PF   + DGFWE  +  PY+ + E  LD L  LLR
Sbjct:  437 GVLKSCEHTGYRAAE-QPAGIKMRLKLYQAHALAWMLDME-DRAKLPRGLNGLFWQERAFG----GGRGSYHYSPALAELRLEAPPLMWGGLLCEEMGLGKTLEVASLVVASLPSLPREAAA----------GKAASRATLIIVPPALLSQWLVELA-------KATDSLSVL---------------------------------------KLDEERALTAKAAELARH--DVVLTTYQQLLQSKPLLAAVAWARVVLDEMQEVAQATSELAVSCEALHAPRRWMVSGTPLSSSIDDLKGELAFLRITPFGANHEDGFWEHNIGRPYKQQEESALDALRVLLR 716          
BLAST of mRNA_P-wetherbeei_contig7280.2.1 vs. uniprot
Match: A0A7S4K2H7_GUITH (Hypothetical protein (Fragment) n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4K2H7_GUITH)

HSP 1 Score: 200 bits (508), Expect = 1.370e-54
Identity = 140/382 (36.65%), Postives = 190/382 (49.74%), Query Frame = 1
Query:    4 GLLKACESSGYAIREPQPSEIRPELFDFQRSTVQWMLDRERDEAGINGFFWQRRDWADTAEAGGSPLYYFPLAGEFRLTRPPLVRGGLLAEEMGLGKTVEILSLIVRN-------RRVIPADAELDSHGRPV----DDRG-----------------------RLLSRGTLIVVPVTLVGQWRDEVA-----AAAAMPVSATAAATLLGGHVGAAPIAISKLLAAIASTGGDGVAAGDDAVXXXXAVAISEAEVIVTYKLEG--VLHEMDVILTTYDSLRCEG-RLKKINWHRVILDECQEIKTATTQVATLCQALHAENRWMVSGTPLASSINDLHGELAFLGVWPFSLQN--DGFWEGKVAAPYRSRSEEGLDLLLALLR 1017
            G+LKA E +GY     QP  +R +L D+Q  T+QWM+D E  E G+N  FWQR ++ D     G   YY P  GE RL  PP+  GG+L+EEMGLGKT E+++LI+         R+V  +D    +    V    +D G                       +L+  GTLIVVP  L+ QW  E+      ++  +  S  +++  + GH    P             GG     G         V    A     +K+E   V  E DV+LTTY  L  E    +K+ W RV+LDE QE++ A + +A  C  L    RWMVSGTPL SS++DLHGEL FLG+ PF L +  DGFWE ++A P+  R    L+LL  LLR
Sbjct:  281 GVLKAQEHTGYPSAN-QPKGLRLQLLDYQLQTLQWMIDHEEFEFGLNQLFWQRHEFLD-----GGFYYYAPELGELRLEEPPVFHGGILSEEMGLGKTAEVVALILTQKERKKQVRKVAGSDRSGSADDSTVCDEMEDDGECENRVKAGAEEXXXXXXXXGAKKLIRGGTLIVVPPHLLSQWSSELEKCVGKSSDVLSFSVISSSMSVTGHCSLIP-------------GGPKECEGR--------VCPGHAG----HKMERLRVFFEEDVVLTTYPVLSSERLSFQKVRWERVVLDEMQEVRHAKSLLAKTCDKLRCNTRWMVSGTPLYSSVSDLHGELKFLGILPFCLPDELDGFWEIRIAKPFSERKRSALELLDLLLR 631          
BLAST of mRNA_P-wetherbeei_contig7280.2.1 vs. uniprot
Match: A0A7S4K2G9_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4K2G9_GUITH)

HSP 1 Score: 200 bits (508), Expect = 1.080e-53
Identity = 140/382 (36.65%), Postives = 190/382 (49.74%), Query Frame = 1
Query:    4 GLLKACESSGYAIREPQPSEIRPELFDFQRSTVQWMLDRERDEAGINGFFWQRRDWADTAEAGGSPLYYFPLAGEFRLTRPPLVRGGLLAEEMGLGKTVEILSLIVRN-------RRVIPADAELDSHGRPV----DDRG-----------------------RLLSRGTLIVVPVTLVGQWRDEVA-----AAAAMPVSATAAATLLGGHVGAAPIAISKLLAAIASTGGDGVAAGDDAVXXXXAVAISEAEVIVTYKLEG--VLHEMDVILTTYDSLRCEG-RLKKINWHRVILDECQEIKTATTQVATLCQALHAENRWMVSGTPLASSINDLHGELAFLGVWPFSLQN--DGFWEGKVAAPYRSRSEEGLDLLLALLR 1017
            G+LKA E +GY     QP  +R +L D+Q  T+QWM+D E  E G+N  FWQR ++ D     G   YY P  GE RL  PP+  GG+L+EEMGLGKT E+++LI+         R+V  +D    +    V    +D G                       +L+  GTLIVVP  L+ QW  E+      ++  +  S  +++  + GH    P             GG     G         V    A     +K+E   V  E DV+LTTY  L  E    +K+ W RV+LDE QE++ A + +A  C  L    RWMVSGTPL SS++DLHGEL FLG+ PF L +  DGFWE ++A P+  R    L+LL  LLR
Sbjct:  281 GVLKAQEHTGYPSAN-QPKGLRLQLLDYQLQTLQWMIDHEEFEFGLNQLFWQRHEFLD-----GGFYYYAPELGELRLEEPPVFHGGILSEEMGLGKTAEVVALILTQKERKKQVRKVAGSDRSGSADDSTVCDEMEDDGECENRVKAGAEEXXXXXXXXGAKKLIRGGTLIVVPPHLLSQWSSELEKCVGKSSDVLSFSVISSSMSVTGHCSLIP-------------GGPKECEGR--------VCPGHAG----HKMERLRVFFEEDVVLTTYPVLSSERLSFQKVRWERVVLDEMQEVRHAKSLLAKTCDKLRCNTRWMVSGTPLYSSVSDLHGELKFLGILPFCLPDELDGFWEIRIAKPFSERKRSALELLDLLLR 631          
BLAST of mRNA_P-wetherbeei_contig7280.2.1 vs. uniprot
Match: F0XXK2_AURAN (FHA domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XXK2_AURAN)

HSP 1 Score: 183 bits (465), Expect = 6.550e-48
Identity = 128/359 (35.65%), Postives = 173/359 (48.19%), Query Frame = 1
Query:    4 GLLKACESSGYAIREPQPSEIRPELFDFQRSTVQWMLDRERDEAGINGFFWQRRDWADTAEAGGSPLYYFPLAGEFRLTRPPLVRGGLLAEEMGLGKTVEILSLIVRN----RRVIPADAELDSHGRPVDDRGRLL--SRGTLIVVPVTLVGQWRDEVAAAAAMPVSATAAATLLGGHVGAAPIAISKLLAAIASTGGDGVAAGDDAVXXXXAVAISEAEVIVTYKLEGVLHEMDVILTTYDSL------RCEGR-------LKKINWHRVILDECQEIKTATTQVATLCQALHAENRWMVSGTPLASSINDLHGELAFLGVWPFSLQN--DGFWEGKVAAPYRSRSEEGLDLLLALLR 1017
            G++++ E  G    + QP+EI   +  +Q   ++WM   E  + G+NG FW+RRD+ D     G   YY P  GE RL  PP V GGLL++EMG+GKT+E+LSL+         +  AD   D    P D   + L  SR TL+V+P  LV QW DE+  +   P    A            P             G  G  A           A+              L + DV++TTY++L      +  G        L +I+WHRV+LDE Q + +  T +A  C  L A +RWMVSGTPL   I DL+GEL FLGV+PFSL +  DGFW   V  P+  R    L+ L  LLR
Sbjct: 1721 GVMRSAEHCG-GPEDAQPAEIALPMKPYQLMALRWMRSMEELDRGLNGLFWERRDFVD-----GGCFYYAPDLGEARLEAPPTVHGGLLSDEMGMGKTLEMLSLVCARPATAAALAAADLAADEREAPDDGAAKPLAASRATLLVLPPALVSQWLDEIRKSTVAPGPRVACFVTDEDRKALVPERCDL-------RGAGGKKATKREFFVQRRAALER------------LADHDVVVTTYNALTGPVYDKRRGANNGDAQPLSQIHWHRVVLDEMQMVSSPNTVLARTCADLWASSRWMVSGTPLCDGILDLNGELRFLGVYPFSLSDASDGFWHHCVQRPWDLRDPAALERLELLLR 2054          
BLAST of mRNA_P-wetherbeei_contig7280.2.1 vs. uniprot
Match: A0A2R5GH79_9STRA (DNA repair protein rad5 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GH79_9STRA)

HSP 1 Score: 176 bits (447), Expect = 1.520e-45
Identity = 125/372 (33.60%), Postives = 178/372 (47.85%), Query Frame = 1
Query:    7 LLKACESSGYAIREPQPSEIRPELFDFQRSTVQWMLDRERDEAGINGFFWQRRDWADT--------------------------------AEAGGSPLYYFPLA-GEFRLTRPPLVRGGLLAEEMGLGKTVEILSLIVRNRRVIPADAELDSHGRPVDDRGRLLSRGTLIVVPVTLVGQWRDEVAAAAAMPVSATAAATLLGGHVGAAPIAISKLLAAIASTGGDGVAAGDDAVXXXXAVAISEAEVIVTYKLEGVLHEMDVILTTYDSLR-CEGRLKKINWHRVILDECQEIKTATTQVATLCQALHAENRWMVSGTPLASSINDLHGELAFLGVWPFSL--QNDGFWEGKVAAPYRSRSEEGLDLLLALL 1014
            LL + ES GYA  +  P  +  E+ D+Q  T+QWM+D+ER   G+NG FW+ R W  T                                 E+     ++F    GE RL +PPLVRGGL+ EEMGLGKT+E ++LI+ +R       E+D    P +D     S+ +L VVP  L+ QW +E+                                        D VA  +D +           +   T K    L   D++L TY S++ C   +  ++W RV LDE QEI+++TT +A+ C+++ A  RWM+SGTP+ + I+D+HGEL FLGV PF L   +DGFW   V  PY +R E+ L  L  LL
Sbjct:  349 LLGSHESVGYAQYKASPPGLALEMRDYQLQTLQWMVDQERLPRGLNGCFWEERAWTPTLQEEAEEAVTTGRKASSRQKGTKVEAKAETESTESNMEESFFFSSELGELRLQKPPLVRGGLVCEEMGLGKTLEFIALILHDR----VSPEVDY--APREDL--YASQASLFVVPDALLPQWAEEL------------------------------------EKSPDDVA--EDIIFSNVMTRRRGPD---TEKAAQDLAACDIVLATYRSVQQCSLLINMVHWRRVCLDEMQEIRSSTTVLASKCRSITARARWMISGTPVYTGIDDIHGELNFLGVIPFCLPDNSDGFWGRCVKTPYEARDEKSLSRLGLLL 671          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7280.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2K8_ECTSI1.340e-8848.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A4D9CZ02_9STRA4.820e-6536.40Helicase ATP-binding domain-containing protein n=1... [more]
C1EH46_MICCC2.080e-5936.41SNF2 super family n=1 Tax=Micromonas commoda (stra... [more]
A0A0G4IL78_PLABS4.330e-5637.79Uncharacterized protein n=1 Tax=Plasmodiophora bra... [more]
A0A7S0DGF1_9EUKA1.310e-5539.09Hypothetical protein (Fragment) n=1 Tax=Amorphochl... [more]
A0A7S3SF79_EMIHU3.950e-5538.66Hypothetical protein n=2 Tax=Emiliania huxleyi Tax... [more]
A0A7S4K2H7_GUITH1.370e-5436.65Hypothetical protein (Fragment) n=1 Tax=Guillardia... [more]
A0A7S4K2G9_GUITH1.080e-5336.65Hypothetical protein n=1 Tax=Guillardia theta TaxI... [more]
F0XXK2_AURAN6.550e-4835.65FHA domain-containing protein n=1 Tax=Aureococcus ... [more]
A0A2R5GH79_9STRA1.520e-4533.60DNA repair protein rad5 n=1 Tax=Hondaea fermentalg... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7280contigP-wetherbeei_contig7280:412..2702 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7G2K8
PFAMsHIRAN,Helicase_C,SNF2_N,UBA_4,zf-C3HC4_3,zf-RING_5
Model size1020
Max annot lvl2759|Eukaryota
KEGG koko:K15710,ko:K15711
Hectar predicted targeting categoryother localisation
Exons7
Evalue2.2e-89
EggNOG OGsCOG0141@1|root,COG0553@1|root,KOG1001@2759|Eukaryota,KOG1002@2759|Eukaryota
EC2.3.2.27
Descriptionpyrimidine dimer repair by nucleotide-excision repair
Cds size1020
COG categoryE
BRITEko00000,ko01000,ko03400,ko04121
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7280.2.1prot_P-wetherbeei_contig7280.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7280 412..2702 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186969.9216568-CDS-P-wetherbeei_contig7280:411..5161683186969.9216568-CDS-P-wetherbeei_contig7280:411..516Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7280 412..516 +
1683186969.93333-CDS-P-wetherbeei_contig7280:745..8381683186969.93333-CDS-P-wetherbeei_contig7280:745..838Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7280 746..838 +
1683186969.955338-CDS-P-wetherbeei_contig7280:919..10111683186969.955338-CDS-P-wetherbeei_contig7280:919..1011Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7280 920..1011 +
1683186969.9737425-CDS-P-wetherbeei_contig7280:1247..14131683186969.9737425-CDS-P-wetherbeei_contig7280:1247..1413Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7280 1248..1413 +
1683186969.9886599-CDS-P-wetherbeei_contig7280:1752..20511683186969.9886599-CDS-P-wetherbeei_contig7280:1752..2051Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7280 1753..2051 +
1683186969.9984398-CDS-P-wetherbeei_contig7280:2249..23401683186969.9984398-CDS-P-wetherbeei_contig7280:2249..2340Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7280 2250..2340 +
1683186970.0086787-CDS-P-wetherbeei_contig7280:2528..27021683186970.0086787-CDS-P-wetherbeei_contig7280:2528..2702Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7280 2529..2702 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7280.2.1

>prot_P-wetherbeei_contig7280.2.1 ID=prot_P-wetherbeei_contig7280.2.1|Name=mRNA_P-wetherbeei_contig7280.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=340bp
AGLLKACESSGYAIREPQPSEIRPELFDFQRSTVQWMLDRERDEAGINGF
FWQRRDWADTAEAGGSPLYYFPLAGEFRLTRPPLVRGGLLAEEMGLGKTV
EILSLIVRNRRVIPADAELDSHGRPVDDRGRLLSRGTLIVVPVTLVGQWR
DEVAAAAAMPVSATAAATLLGGHVGAAPIAISKLLAAIASTGGDGVAAGD
DAVAAAAAVAISEAEVIVTYKLEGVLHEMDVILTTYDSLRCEGRLKKINW
HRVILDECQEIKTATTQVATLCQALHAENRWMVSGTPLASSINDLHGELA
FLGVWPFSLQNDGFWEGKVAAPYRSRSEEGLDLLLALLRV
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mRNA from alignment at P-wetherbeei_contig7280:412..2702+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7280.2.1 ID=mRNA_P-wetherbeei_contig7280.2.1|Name=mRNA_P-wetherbeei_contig7280.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2291bp|location=Sequence derived from alignment at P-wetherbeei_contig7280:412..2702+ (Phaeothamnion wetherbeei SAG_119_79)
GCAGGACTCCTCAAGGCGTGCGAGAGCTCCGGTTACGCCATCCGCGAGCC GCAACCGTCGGAGATCAGGCCAGAGCTGTTCGACTTTCAGCGCTCGACTG TGCAGGTGTGCGCGGAGTTTTCTTGAATTCTTTTTTTCCCCTCTTTCTGG TCTGCCTGGGCTGTAAAGTCTGCGTTTCGTAGTAATATATGAGGGCGCCA GGGCGACGTGCAGCTGACGCTATTCGTTCTCTTCGGTGTTCTAGACCCCT TCTTTCAAAAATGATCCCACAGTTCACACTGCCACATTCCATCGCCTATC GATCCTGTTTTCCCACTCCCTCCCTGCATCGCAGTGGATGCTCGACCGGG AGCGCGACGAGGCCGGAATAAACGGCTTCTTCTGGCAGCGGCGCGACTGG GCCGACACCGCTGAGGCCGGCGGAAGCGTTGGCGGTGGCAGTGGCGGCGG CAGCGGCGGCGGTAACAGCGGTTGTGGCAATAGCAACGGCGGGGCCAGCA GCGATGAGCCGCTCTACTACTTTCCGCTGGCGGGCGAGTTCCGCCTGACG CGGCCGCCGCTCGTGCGGGGCGGCTTGCTGGCCGAGGAGATGGGCTTGGG GTGAGTTAAAGCTTTGCTTCTGCCGAGCGCTGGGCTACTGGGTTTAGTAT TTGCCATGTGCGCTGAGAATGGGGGCTCCATTTTTGCGTTACCCTTGCAT CTGCAGCGCGAAGCCCAAGCTGTGGCTGCGTACCAGCACTCTGTAAGCCA GTCATGACAAATCGTTGCTGATGAGTCCATTTCACCATTCCCCCTTACCT CACCTTTCCTGCTTTGCTGCTTTTTCTTTTGAACAGCAAAACAGTGGAGA TTCTGAGCCTTATAGTGCGGAACCGCCGAGTCATTCCCGCCGACGCCGAA CTGGACTCCCACGGCCGGCCGGTGGACGACCGCGGCCGCCTCCTAAGCCG CGGCACGCTCATCGTGGTGCCGGTAACCCTCGTCGGCCAGTGGCGGGACG AAGTCCGCAAAAACGTGGCTCCGGGGGCCATCTCGCTTGTGACTTTCACT ACGGGAGTGTCAACAGCCACCGTCAAGGTCAAGGACTTGCGGCGGCGCAA TGGCGAGCCGCTGCCATTGCCCGACACCCTGGCGAAGGCGTACGCTCTCA ACCGCACGCCTGTGCTTGTGCCGTTTGGCAGCGTCGCGGGCCAGGGGGAC GCCGGTCTTGGCGGCACCGGCACTCGCGGCGACGCCCGCACAGGCGGCGG CGGCGGCGGCGGCGGTGGCGGAGCTGTGGCACCGACGGGAGGGATGGCGG TGGGAGGGGCTGCGGCGGCGGAAGGGGGTGCGGTGGCGGAGGTGGCGGCG GCAGCTGCAATGCCCGTCTCAGCGACGGCGGCGGCGACGCTGCTCGGAGG CCACGTCGGTGCGGCCCCGATCGCCATATCAAAGCTGCTCGCGGCGATTG CGTCGACCGGCGGTGACGGGGTGGCGGCCGGCGACGACGCAGTCGCTGCG GCGGCGGCGGTGGCGATCAGTGAGGCGGAGGTGATCGTGACGTACAAGCT CGAGGGCGTGCTGCACGAGATGGACGTTATTCTGACCACTTACGATAGCC TCCGCTGCGAGGGCCGCCTCAAGAAGATAAACTGGCACAGGTGAGAGGTA AGAAAGTGTTTGTTCTCGTTGTTCTCTGCAATTGTCTATTGATATCAATG TTCACAGGTTGCCGCTTGTGTTTTCGTCGGTTGATTTCAGCAGAGCACTC GGGAAGAAGCGTCGACTAACGCCTTCTGCTTTGTTGCTGTGTTGGGGCCG GGATCTGCCACTTTTCCGCTCGTACCACCGCCAAAAAGGGTGATTCTCGA CGAGTGCCAGGAGATCAAGACGGCGACGACGCAGGTGGCGACGCTCTGCC AGGCGCTGCACGCCGAGAACCGCTGGATGGTGAACCTTTCTTCTTTCCAA CTTTCCATTTCGCCTTCGCTTTGCTTCACTTTGAAAACCCCTTCCTTTTT GCTATGTACTTTCGTCTTAAACGTAAAAGACGTCCCTTTGTTCCCGTGCT GACGGCTTTATTGCCTCTTTTCTTCGTTTTGCGCTGTTTTCTTTGTTTTT CCGCGGCGCTCCGCCAGGTGTCGGGTACGCCGCTGGCGTCCTCCATCAAC GACCTGCACGGGGAGCTGGCATTCCTCGGAGTGTGGCCGTTTTCGCTACA GAACGACGGCTTCTGGGAGGGCAAGGTGGCGGCGCCGTACCGCTCGCGAT CGGAGGAGGGGCTGGATCTGCTGCTGGCGCTGCTCCGGGTG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig7280:412..2702+

>mRNA_P-wetherbeei_contig7280.2.1 ID=mRNA_P-wetherbeei_contig7280.2.1|Name=mRNA_P-wetherbeei_contig7280.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1020bp|location=Sequence derived from alignment at P-wetherbeei_contig7280:412..2702+ (Phaeothamnion wetherbeei SAG_119_79)
GCAGGACTCCTCAAGGCGTGCGAGAGCTCCGGTTACGCCATCCGCGAGCC
GCAACCGTCGGAGATCAGGCCAGAGCTGTTCGACTTTCAGCGCTCGACTG
TGCAGTGGATGCTCGACCGGGAGCGCGACGAGGCCGGAATAAACGGCTTC
TTCTGGCAGCGGCGCGACTGGGCCGACACCGCTGAGGCCGGCGGAAGCCC
GCTCTACTACTTTCCGCTGGCGGGCGAGTTCCGCCTGACGCGGCCGCCGC
TCGTGCGGGGCGGCTTGCTGGCCGAGGAGATGGGCTTGGGCAAAACAGTG
GAGATTCTGAGCCTTATAGTGCGGAACCGCCGAGTCATTCCCGCCGACGC
CGAACTGGACTCCCACGGCCGGCCGGTGGACGACCGCGGCCGCCTCCTAA
GCCGCGGCACGCTCATCGTGGTGCCGGTAACCCTCGTCGGCCAGTGGCGG
GACGAAGTGGCGGCGGCAGCTGCAATGCCCGTCTCAGCGACGGCGGCGGC
GACGCTGCTCGGAGGCCACGTCGGTGCGGCCCCGATCGCCATATCAAAGC
TGCTCGCGGCGATTGCGTCGACCGGCGGTGACGGGGTGGCGGCCGGCGAC
GACGCAGTCGCTGCGGCGGCGGCGGTGGCGATCAGTGAGGCGGAGGTGAT
CGTGACGTACAAGCTCGAGGGCGTGCTGCACGAGATGGACGTTATTCTGA
CCACTTACGATAGCCTCCGCTGCGAGGGCCGCCTCAAGAAGATAAACTGG
CACAGGGTGATTCTCGACGAGTGCCAGGAGATCAAGACGGCGACGACGCA
GGTGGCGACGCTCTGCCAGGCGCTGCACGCCGAGAACCGCTGGATGGTGT
CGGGTACGCCGCTGGCGTCCTCCATCAACGACCTGCACGGGGAGCTGGCA
TTCCTCGGAGTGTGGCCGTTTTCGCTACAGAACGACGGCTTCTGGGAGGG
CAAGGTGGCGGCGCCGTACCGCTCGCGATCGGAGGAGGGGCTGGATCTGC
TGCTGGCGCTGCTCCGGGTG
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