mRNA_P-wetherbeei_contig7251.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7251.2.1
Unique NamemRNA_P-wetherbeei_contig7251.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig7251.2.1 vs. uniprot
Match: A0A836C9I0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9I0_9STRA)

HSP 1 Score: 256 bits (653), Expect = 1.560e-79
Identity = 137/226 (60.62%), Postives = 160/226 (70.80%), Query Frame = 1
Query:  202 DPPRNFTLAQLAQFRG------ETEGTPIYLSIRGEVFDVSDNRPMYGPEGSYHLFAGHEVSKSLARMSFEPEDLDVMQWDDLSFGEKDTLDGWVDSFRHGKGYAVVGRVV--PPPEPRPV-TPAELAAGTGSQPAPPGAAAAPILVAVDGKVFDMSYGGVVHYGPQGPYRSFAGRDATRALAKMSLDPADLDAPSCADLSADERSVLRDWLARFEKKGYPVIGNY 852
            +P RNFTL QL  F G      + E  PIY+++RGEVFDVS  R  YG EG+YH+FAGH+ S SLAR S +  DL+ M W++LS GE+DTLDGW+  FR  KGY +VGRVV  P P+P PV T  +LAAGTG  P P GAAAAP+LVAV GKVFD+SYGG  HYG   PY  F GRDA+RALAKMS D  +LD PS ADLS  E  V+ DW ARFEKKGY V+G Y
Sbjct:   58 EPLRNFTLEQLKAFTGVNAKGEDDEDVPIYVALRGEVFDVSQARHAYGKEGNYHIFAGHDASVSLARHSLDASDLNKMTWEELSHGERDTLDGWIQQFRDYKGYPMVGRVVTAPLPDPLPVYTKEQLAAGTGEGPIPDGAAAAPMLVAVAGKVFDVSYGGAPHYGKGCPYNLFVGRDASRALAKMSFDAENLDNPSIADLSLAEVGVMNDWAARFEKKGYRVVGTY 283          
BLAST of mRNA_P-wetherbeei_contig7251.2.1 vs. uniprot
Match: A0A7S4NEZ3_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NEZ3_9STRA)

HSP 1 Score: 220 bits (560), Expect = 1.190e-65
Identity = 116/242 (47.93%), Postives = 154/242 (63.64%), Query Frame = 1
Query:  151 GGGYKASKAQPATPEKLDPPRNFTLAQLAQFRGET-----EGTPIYLSIRGEVFDVSDNRPMYGPEGSYHLFAGHEVSKSLARMSFEPEDLDVMQWDDLSFGEKDTLDGWVDSFRHGKGYAVVGRVVP----PPEPRPVTPAELAAGTGSQPAPPGAAAAPILVAVDGKVFDMSYGGVVHYGPQGPYRSFAGRDATRALAKMSLDPADLDAPSCADLSADERSVLRDWLARF-EKKGYPVIG 846
            G G    + +    E+ +PPRNFT  QL  F G       E  P+YL+++G VFDVS  R  YGP G+Y +F+GHE   +LA+MSF+ + +D   W+ L+FGEK  LDGW++ F++ + Y V GR+VP    PP  + V+  ELA   GS   P G AAAPI VA  GKVFD+S+GGV  YG  G Y SFAG DA+RALAKMS DP+D++ P+  DL+  E+  L DW+  F E+K YPV+G
Sbjct:   36 GSGRNDVEVEEEAVEEEEPPRNFTAMQLKHFDGTKDEKTGEDKPVYLAVKGIVFDVSSGRDFYGPGGAYEMFSGHECGVALAKMSFDEKYIDDFSWESLNFGEKTELDGWIEKFQYYRSYPVKGRLVPEKSIPPSDKTVSTEELAKNDGSMEIPEGYAAAPIYVAAGGKVFDVSFGGVTFYGKDGAYSSFAGVDASRALAKMSFDPSDIENPTINDLTEKEKKCLDDWIKTFGERKQYPVVG 277          
BLAST of mRNA_P-wetherbeei_contig7251.2.1 vs. uniprot
Match: A0A7S3Y4U5_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y4U5_HETAK)

HSP 1 Score: 202 bits (515), Expect = 6.330e-59
Identity = 107/229 (46.72%), Postives = 146/229 (63.76%), Query Frame = 1
Query:  169 SKAQPATPEKLDPPRNFTLAQLAQFRGETEGTPIYLSIRGEVFDVSDNRPMYGPEGSYHLFAGHEVSKSLARMSFEPEDLDVMQWDDLSFGEKDTLDGWVDSFRHGKGYAVVGRVVPPPEPRPVTPAELAAGTGSQPAPPGAAAAPILVAVDGKVFDMSYGGVVHYGPQGPYRSFAGRDATRALAKMSLDPADLDAPSCADLSADERSVLRDWLARFE-KKGYPVIGNY 852
            +K Q    E+ +PPRNFT  QL ++ G  E  PIY+++RG VFDVS     YG +G+Y+LFAGH+ +++LA+MSFE +DL+    +  S  E D+LDGW  +F+  K Y +VGRVV PP+PR ++  EL    G Q  P G A API ++V G V+D+S+GGV  Y     Y  FAG+DA+RALAKMS    D+++    DLS  E  VL DW   F+ +K YP+IG Y
Sbjct:   51 AKKQAQEEEEPEPPRNFTFEQLKKYDGSEEDEPIYVALRGVVFDVSSAPTHYGKDGAYNLFAGHDATRNLAKMSFEEDDLNKPSTEGFSVSEIDSLDGWYTTFKEYKQYPIVGRVVEPPKPRKISREELQEMRGKQTCPEGYATAPICISVKGNVYDVSFGGVTFYMEGAAYHLFAGKDASRALAKMSFKDEDVNSTELKDLSEKELKVLDDWENTFKNRKKYPIIGFY 279          
BLAST of mRNA_P-wetherbeei_contig7251.2.1 vs. uniprot
Match: W7TR10_9STRA (Heme steroid binding domain-containing n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TR10_9STRA)

HSP 1 Score: 201 bits (510), Expect = 3.410e-58
Identity = 105/232 (45.26%), Postives = 151/232 (65.09%), Query Frame = 1
Query:  184 ATPEKLDPPRNFTLAQLAQFRGETEGTPIYLSIRGEVFDVSDNRPMYGPEGSYHLFAGHEVSKSLARMSFEPEDLDVMQWDDLSFGEKDTLDGWVDSFRHGKGYAVVGRVVPPPEPRPVTPAELAAGTGSQPA-------PPGAAAAPILVAVDGKVFDMSYGGVVHYGPQGPYRSFAGRDATRALAKMSLDPADLDAPSCADLSADERSVLRDWLARF-EKKGYPVIGNYV 855
            A  E+ +PPRNFT  QL +F G  E  PIY++++G+V+DVS  R  YGP+G Y  FAGH+V+++ A  S E +DLD    +DL++ +K++L GWV+ +++ K Y VVGR+V PP    +T AE+A   G +P        P G AA PI VAV GKVFDMS+GG + YGP GPY   AG+D +R LAKMS + AD ++ + +DL+  +R  L +W+ +F   + YPV+G  +
Sbjct:   50 APDEEPEPPRNFTATQLREFTGTKEDDPIYVALQGDVYDVSSARDFYGPDGVYGGFAGHDVTRAFALNSLEEKDLDDPNLEDLTYTQKESLHGWVEKYKYYKCYPVVGRLVTPPSGLSLTLAEIAQYKGEEPKEGDAQTIPEGWAAPPIYVAVAGKVFDMSFGGRMFYGPGGPYHFLAGKDGSRPLAKMSFEKADAESRNLSDLTDRQRQTLEEWVEKFINGRKYPVVGKLI 281          
BLAST of mRNA_P-wetherbeei_contig7251.2.1 vs. uniprot
Match: A0A448Z7C9_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z7C9_9STRA)

HSP 1 Score: 196 bits (499), Expect = 2.150e-56
Identity = 112/242 (46.28%), Postives = 146/242 (60.33%), Query Frame = 1
Query:  163 KASKAQPATPEKLDPPRNFTLAQLAQFRGET-----EGTPIYLSIRGEVFDVSDNRPMYGPEGSYHLFAGHEVSKSLARMSFEPEDLDVMQW-DDLSFGEKDTLDGWVDSFRHGKGYAVVGRVVP-----PPEPRPVTPAELAAGTG-SQPAPPGAAAAPILVAVDGKVFDMSYGGVVHYGPQGPYRSFAGRDATRALAKMSLDPADLDAPSCADLSADERSVLRDWLARFE-KKGYPVIGN 849
            K+S+ +       DPPRNFT  QL  F GE      E  P+YLSI G VFDVS  R  YGP+G Y  FAG E   +LA+MSF+ E L+ +    DL++GEKD L+ W++ F + + Y + GR+VP     P + R +T  +LA   G ++  P G AA PI +    KVFD S+GGV  YGP G Y  FAGRD +RALAKMS  P DL+  +  DL   ++ VL DW+  FE KKGYP++GN
Sbjct:   49 KSSQVEEXXXXXPDPPRNFTSLQLVHFNGEPDERTGEDKPVYLSINGIVFDVSQGRNFYGPDGPYAAFAGKECGVALAKMSFDSEHLNNLAGCKDLNYGEKDELENWINKFTYYRKYPIKGRLVPDDILDPLKSRTLTKEDLAKHMGDAEEIPEGYAAVPIYIGAGNKVFDASFGGVEFYGPAGGYNKFAGRDISRALAKMSFSPEDLENTNTDDLEEKQKKVLDDWIKTFEVKKGYPIVGN 290          
BLAST of mRNA_P-wetherbeei_contig7251.2.1 vs. uniprot
Match: A0A7S2KD08_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KD08_9STRA)

HSP 1 Score: 196 bits (497), Expect = 5.670e-56
Identity = 111/229 (48.47%), Postives = 140/229 (61.14%), Query Frame = 1
Query:  193 EKLDPPRNFTLAQLAQFRGET-----EGTPIYLSIRGEVFDVSDNRPMYGPEGSYHLFAGHEVSKSLARMSFEPEDLDVMQW-DDLSFGEKDTLDGWVDSFRHGKGYAVVGRVVPP---PEP-RPVTPAELAAGTGSQPAPPGAAAAPILVAVDGKVFDMSYGGVVHYGPQGPYRSFAGRDATRALAKMSLDPADLDAPSCADLSADERSVLRDWLARFE-KKGYPVIG 846
            E+ DPPRNFT  QL  F G+      E  P+YLS+ G VFDVSD R  YGP G Y LFAGHE   +LA+ SF+   LD M   ++L+FGEK+ LD W+  F + + Y V GR++P    P+P R VT +EL A  G    P G AAAPI V    K +DMS+GGV  YGP   Y  FAG+D +RALAKMS +P D +    +DLS  E  +L DW+  FE +K YP +G
Sbjct:   73 EEPDPPRNFTAEQLKYFDGKVDEKTDENKPVYLSVNGTVFDVSDGRDFYGPGGPYELFAGHECGVALAKFSFDTTHLDDMAGCENLNFGEKEELDNWIQKFTYHRLYPVKGRLIPQDMLPDPNRIVTKSELEANNGEGEIPKGYAAAPIYVGAGEKCYDMSFGGVQFYGPGCGYNRFAGKDVSRALAKMSFEPGDTENTDVSDLSEKELKILADWIKTFEDRKQYPCVG 301          
BLAST of mRNA_P-wetherbeei_contig7251.2.1 vs. uniprot
Match: B7GAT1_PHATC (Predicted protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GAT1_PHATC)

HSP 1 Score: 194 bits (493), Expect = 1.360e-55
Identity = 107/237 (45.15%), Postives = 139/237 (58.65%), Query Frame = 1
Query:  169 SKAQPATPEKLDPPRNFTLAQLAQFRGETEGT-----PIYLSIRGEVFDVSDNRPMYGPEGSYHLFAGHEVSKSLARMSFEPEDLDVMQW-DDLSFGEKDTLDGWVDSFRHGKGYAVVGRVVP----PPEPRPVTPAELAAGTGSQPAPPGAAAAPILVAVDGKVFDMSYGGVVHYGPQGPYRSFAGRDATRALAKMSLDPADLDAPSCADLSADERSVLRDWLARFE-KKGYPVIG 846
            +K  P   E+ DPPRNFT  QL  F GE E       P+YLS+ G VFDVSD R  YGP+G Y  FAG E   +LA+MSF+ E LD       L+ GEK  L+GW+D F + + Y + GR++P    P   R ++  ELA   G  P P G A  PI +    KVFDMS+GGV  YG  GPY  FAG D +R+LAKMSLD  D+     +D+S  +  ++ DW+  FE +K YP++G
Sbjct:   48 TKDMPEEEEQPDPPRNFTAKQLRYFNGEKEDKGDDLKPVYLSVNGTVFDVSDGRNFYGPDGPYAAFAGRECGVALAKMSFDEEHLDDFDGCTKLNPGEKMELEGWIDKFTYYRPYPIKGRLIPDQCMPSPERVLSKEELAKNNGKGPTPEGYATPPIYIGAGDKVFDMSFGGVTFYGEGGPYHRFAGYDVSRSLAKMSLDEEDIKNSDVSDMSEKQLKIMNDWIKTFEERKSYPLVG 284          
BLAST of mRNA_P-wetherbeei_contig7251.2.1 vs. uniprot
Match: A0A7S3V6Y8_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V6Y8_9STRA)

HSP 1 Score: 189 bits (480), Expect = 8.400e-54
Identity = 117/242 (48.35%), Postives = 142/242 (58.68%), Query Frame = 1
Query:  172 KAQPATPEKLD------PPRNFTLAQLAQFRG-ETEGTP----IYLSIRGEVFDVSDNRPMYGPEGSYHLFAGHEVSKSLARMSFEPEDLDVMQW-DDLSFGEKDTLDGWVDSFRHGKGYAVVGRVVPP---PEPRPVTPAE-LAAGTGSQPAPPGAAAAPILVAVDGKVFDMSYGGVVHYGPQGPYRSFAGRDATRALAKMSLDPADLDAPSCADLSADERSVLRDWLARFE-KKGYPVIG 846
            K  P  PE  D      PPRNFT  QL  F G E E T     IYLS+ G VFDVSD +  YGPEG Y LFAGHE   +LA+MSF+ E LD M+   +++FGEK  LD W+  F H + Y + GR++P    P+P  +   E LA   GS   P G A API V  D KVFDMS+GG + YGP   Y  FAG DATRALA MSL   D   P  +DL   +  +L+DW+  FE KK YP++G
Sbjct:   30 KPVPDQPEVDDDEDDILPPRNFTQKQLLHFDGKEDENTQETKSIYLSLNGVVFDVSDGKDFYGPEGPYELFAGHECGVALAKMSFDKEFLDDMEGCKNMNFGEKCELDNWLMRFEHERRYPIRGRLIPDDKMPDPTRIISKEVLAENGGSGKVPEGYAVAPIYVGADDKVFDMSFGGNLFYGPDCSYEVFAGEDATRALALMSLKAEDAKNPDISDLDEKKIRILQDWIKTFEVKKNYPIVG 271          
BLAST of mRNA_P-wetherbeei_contig7251.2.1 vs. uniprot
Match: A0A7S1ZS28_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZS28_TRICV)

HSP 1 Score: 187 bits (475), Expect = 1.800e-53
Identity = 108/231 (46.75%), Postives = 140/231 (60.61%), Query Frame = 1
Query:  193 EKLDPPRNFTLAQLAQFRGETEGT-------PIYLSIRGEVFDVSDNRPMYGPEGSYHLFAGHEVSKSLARMSFEPEDLDVMQWDDLSFGEKDTLDGWVDSFRHGKGYAVVGRVVP----PPEPRPVTPAELAAGTGS-QPAPPGAAAAPILVAVDGKVFDMSYGGVVHYGPQGPYRSFAGRDATRALAKMSLDPADLDAPSCADLSADERSVLRDWLARFE-KKGYPVIG 846
            ++ DP  NFT  QL  F G  +         P+YLS++G V+D S  R +YGP G + ++AG E   +LAR S +  DLD +  DDLS  E+  L+GWV+  +    Y V+GR++P    P E R V+  ELA   G  Q  P G AAAPI +A  GKV+DMS+GGV  YG  G Y  FAG+DA+RALAKMSLDPAD +  S +DLS  E  VL DW+  FE +K YP +G
Sbjct:   11 DEPDPLNNFTSVQLLHFDGGEDSVGKKKGEKPVYLSVKGVVYDASKGRHLYGPGGPFEVYAGRECGAALARGSLDQSDLDNISCDDLSMNEQTELEGWVERLKSSLCYPVLGRLIPGDALPSEDRVVSKEELAQYDGKIQDIPEGYAAAPIYLAAKGKVYDMSFGGVSFYGKGGAYNCFAGKDASRALAKMSLDPADTENTSTSDLSEKEIKVLNDWVKTFEERKKYPCVG 241          
BLAST of mRNA_P-wetherbeei_contig7251.2.1 vs. uniprot
Match: A0A7S2SXE7_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SXE7_9STRA)

HSP 1 Score: 186 bits (472), Expect = 1.920e-52
Identity = 100/232 (43.10%), Postives = 143/232 (61.64%), Query Frame = 1
Query:  205 PPRNFTLAQLAQFRG---------ETEGTPIYLSIRGEVFDVSDNRPMYGPEGSYHLFAGHEVSKSLARMSFEPEDLDVMQWDDLSFGEKDTLDGWVDSFRHGKGYAVVGRVVPPPEPRPVTPAELAAGTGSQPAPPGAAAAPILVAVDGKVFDMSYGGVVHYGPQGPYRSFAGRDATRALAKMSLDPADLDAPSCADLSADERSVLRDWLARFE-KKGYPVIGNYVAPASS 870
            PPR+FT AQL +F G           +G  IY++++G+V+DV+     YGPEG YH+FAGHE+++ LAR +F+ EDLD    +D S  E D L+ WV  ++H K Y + GR+V PPE R +T  EL+  TG    P G    P+ + + G+V D+S+GG   Y P  PY    G+D++RALAK+SLD  D+ +   +DL+A +  VL DW  +F+ KK YP++G Y  P SS
Sbjct:   61 PPRDFTPAQLLRFNGVPSGDGGLLAQDGEKIYVAVKGDVYDVTKAAMFYGPEGPYHVFAGHEITRCLARGTFQ-EDLDRGDVEDCSHAEIDDLENWVTKYKHIKRYPIAGRLVHPPESRSMTMEELSGFTGRTQPPKGRVNPPMYIGIKGQVLDVSFGGYDMYKPGAPYNILLGKDSSRALAKVSLDEKDVASRDISDLTASQIKVLDDWADKFKNKKLYPIVGTYPFPGSS 291          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7251.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836C9I0_9STRA1.560e-7960.62Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S4NEZ3_9STRA1.190e-6547.93Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
A0A7S3Y4U5_HETAK6.330e-5946.72Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
W7TR10_9STRA3.410e-5845.26Heme steroid binding domain-containing n=2 Tax=Mon... [more]
A0A448Z7C9_9STRA2.150e-5646.28Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S2KD08_9STRA5.670e-5648.47Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
B7GAT1_PHATC1.360e-5545.15Predicted protein n=3 Tax=Phaeodactylum tricornutu... [more]
A0A7S3V6Y8_9STRA8.400e-5448.35Hypothetical protein n=2 Tax=Chaetoceros debilis T... [more]
A0A7S1ZS28_TRICV1.800e-5346.75Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S2SXE7_9STRA1.920e-5243.10Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7251contigP-wetherbeei_contig7251:926..2583 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FY31
PFAMsCyt-b5
Model size1236
Max annot lvl2759|Eukaryota
KEGG koko:K17278
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005488,GO:0005496,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006066,GO:0006629,GO:0006694,GO:0006696,GO:0008047,GO:0008150,GO:0008152,GO:0008202,GO:0008204,GO:0008289,GO:0008610,GO:0009058,GO:0009889,GO:0009987,GO:0012505,GO:0016020,GO:0016125,GO:0016126,GO:0016128,GO:0016129,GO:0019216,GO:0019218,GO:0019222,GO:0020037,GO:0030234,GO:0031323,GO:0031326,GO:0031984,GO:0032443,GO:0042175,GO:0043085,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044093,GO:0044107,GO:0044108,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0046165,GO:0046890,GO:0046906,GO:0048037,GO:0050789,GO:0050790,GO:0050794,GO:0050810,GO:0062012,GO:0065007,GO:0065009,GO:0071704,GO:0080090,GO:0097159,GO:0097384,GO:0098772,GO:0098827,GO:0106118,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1901615,GO:1901617,GO:1902652,GO:1902653,GO:1902930
Exons2
Evalue2.26e-61
EggNOG OGsKOG1110@1|root,KOG1110@2759|Eukaryota
Descriptionsteroid binding
Cds size852
COG categoryCH
BRITEko00000,ko04147
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186968.3024209-UTR-P-wetherbeei_contig7251:925..12881683186968.3024209-UTR-P-wetherbeei_contig7251:925..1288Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig7251 926..1288 -
1683186968.3282557-UTR-P-wetherbeei_contig7251:2562..25831683186968.3282557-UTR-P-wetherbeei_contig7251:2562..2583Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig7251 2563..2583 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186968.312002-CDS-P-wetherbeei_contig7251:1288..14861683186968.312002-CDS-P-wetherbeei_contig7251:1288..1486Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7251 1289..1486 -
1683186968.3202262-CDS-P-wetherbeei_contig7251:1908..25621683186968.3202262-CDS-P-wetherbeei_contig7251:1908..2562Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7251 1909..2562 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7251.2.1prot_P-wetherbeei_contig7251.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7251 1289..2562 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7251.2.1

>prot_P-wetherbeei_contig7251.2.1 ID=prot_P-wetherbeei_contig7251.2.1|Name=mRNA_P-wetherbeei_contig7251.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=284bp
MSLQTRLSDLAATLEDSAVFFAVAALASAYLFWRIADWARGGGGGGYKAS
KAQPATPEKLDPPRNFTLAQLAQFRGETEGTPIYLSIRGEVFDVSDNRPM
YGPEGSYHLFAGHEVSKSLARMSFEPEDLDVMQWDDLSFGEKDTLDGWVD
SFRHGKGYAVVGRVVPPPEPRPVTPAELAAGTGSQPAPPGAAAAPILVAV
DGKVFDMSYGGVVHYGPQGPYRSFAGRDATRALAKMSLDPADLDAPSCAD
LSADERSVLRDWLARFEKKGYPVIGNYVAPASS*
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mRNA from alignment at P-wetherbeei_contig7251:926..2583-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7251.2.1 ID=mRNA_P-wetherbeei_contig7251.2.1|Name=mRNA_P-wetherbeei_contig7251.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1658bp|location=Sequence derived from alignment at P-wetherbeei_contig7251:926..2583- (Phaeothamnion wetherbeei SAG_119_79)
AATGTTCGTTTATAGCCCGCGATGTCGCTCCAGACGCGCCTCTCTGACCT CGCGGCCACCCTGGAGGACAGCGCCGTCTTCTTTGCCGTCGCGGCGCTCG CTTCGGCGTATCTGTTCTGGAGGATCGCGGATTGGGCAAGGGGAGGAGGC GGTGGCGGCTACAAGGCCTCCAAGGCCCAGCCCGCCACACCCGAGAAGCT CGACCCTCCACGCAACTTCACGCTGGCGCAGTTGGCGCAGTTCCGGGGCG AGACGGAAGGCACTCCTATCTACCTGTCGATCCGCGGAGAGGTCTTCGAC GTGAGCGACAACCGGCCCATGTACGGGCCCGAGGGCTCCTATCACCTCTT CGCCGGACACGAGGTTTCCAAAAGCCTCGCTCGGATGAGCTTCGAGCCCG AGGACCTCGACGTGATGCAGTGGGACGACTTGAGCTTCGGGGAGAAGGAC ACGCTCGACGGATGGGTGGACAGCTTCCGCCACGGGAAGGGCTACGCCGT CGTCGGCCGCGTCGTGCCGCCGCCGGAGCCGCGGCCGGTGACGCCGGCCG AGCTTGCCGCGGGCACTGGCTCCCAGCCGGCGCCTCCAGGGGCGGCCGCT GCACCGATTCTGGTCGCCGTGGACGGGAAAGTCTTCGACATGTCGTACGG CGGCGTCGTGCATTACGGACCACAGGTCAGATTCGCGCTTTTGGTGCGTT TTCCTCGTATTATCTGGGTTTTTGGAGAGAAGGCGAGGAAGGTCTGCGAA CGAGCTCAACTCCCTTTGAATTCTGATGATGTTCCTCGTATTCTCGCTCA CAATGTCGCAGCACCTTTGTGGGTAAGCTTTTCCATGCATTCCTGGGACA TCATGTTTCCTTGCTGATCAGATGAAAACCCGCCCCTTCTCAGCCTCCTT TTTGGTGGTTCCTGCAACGCAGCAGGAGCCTCTTGTTGGTTTCGATATTG GATTTGGAGACGTATCTTGGTTTTATTATTCTCAAGCATGGATTTGGACA AACCGCCCTTGTCCTCTTTTCGGCCCGGGCCACCTCTCCCTCGCTTTAGT TGCCTTTGATACCCTATCCTCCACTTCCGCCTTCCCGGCTCCCGCAGGGT CCGTACCGGAGTTTCGCCGGACGGGATGCGACCCGCGCTTTGGCCAAAAT GTCGCTGGATCCCGCCGACCTGGATGCTCCGTCCTGCGCCGACCTTTCGG CGGACGAGCGATCTGTGCTGCGGGACTGGCTGGCCCGATTCGAGAAAAAA GGATATCCTGTGATCGGAAACTATGTCGCTCCAGCCTCGAGCTGAGGCGT GTAAGCGCGGCGGGAGTTTGGGAAGCCCAAGAGCCGCCAGTATATTCGGC GGGGGGTAGCAGGAAACCTACGGAGCGCTGTCCGGTGAGCGCTCCTGCTT GTATCACACCGTTAACTACTCTACGTACACGTTAGCGCCTCTGGTTGGCG CTGGGCCTGATTCGACCTGCTGGCTCGAAAATTGGGGATTAAATACGTTC TAGCTCTGGTAGTGTAAATTCATGTTTCTCAGAAGGAGGTTTGTTCCCGC CCGTCCTTTCAAATCATGTGCAAGGCAGATATGCTTTGTGTTTTTTTGCT GTCATATCCACCGGCCAATGCCCTCAACCGCCTCGTAAGAAATTACTCTC TCCAAGGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig7251:926..2583-

>mRNA_P-wetherbeei_contig7251.2.1 ID=mRNA_P-wetherbeei_contig7251.2.1|Name=mRNA_P-wetherbeei_contig7251.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=852bp|location=Sequence derived from alignment at P-wetherbeei_contig7251:926..2583- (Phaeothamnion wetherbeei SAG_119_79)
ATGTCGCTCCAGACGCGCCTCTCTGACCTCGCGGCCACCCTGGAGGACAG
CGCCGTCTTCTTTGCCGTCGCGGCGCTCGCTTCGGCGTATCTGTTCTGGA
GGATCGCGGATTGGGCAAGGGGAGGAGGCGGTGGCGGCTACAAGGCCTCC
AAGGCCCAGCCCGCCACACCCGAGAAGCTCGACCCTCCACGCAACTTCAC
GCTGGCGCAGTTGGCGCAGTTCCGGGGCGAGACGGAAGGCACTCCTATCT
ACCTGTCGATCCGCGGAGAGGTCTTCGACGTGAGCGACAACCGGCCCATG
TACGGGCCCGAGGGCTCCTATCACCTCTTCGCCGGACACGAGGTTTCCAA
AAGCCTCGCTCGGATGAGCTTCGAGCCCGAGGACCTCGACGTGATGCAGT
GGGACGACTTGAGCTTCGGGGAGAAGGACACGCTCGACGGATGGGTGGAC
AGCTTCCGCCACGGGAAGGGCTACGCCGTCGTCGGCCGCGTCGTGCCGCC
GCCGGAGCCGCGGCCGGTGACGCCGGCCGAGCTTGCCGCGGGCACTGGCT
CCCAGCCGGCGCCTCCAGGGGCGGCCGCTGCACCGATTCTGGTCGCCGTG
GACGGGAAAGTCTTCGACATGTCGTACGGCGGCGTCGTGCATTACGGACC
ACAGGGTCCGTACCGGAGTTTCGCCGGACGGGATGCGACCCGCGCTTTGG
CCAAAATGTCGCTGGATCCCGCCGACCTGGATGCTCCGTCCTGCGCCGAC
CTTTCGGCGGACGAGCGATCTGTGCTGCGGGACTGGCTGGCCCGATTCGA
GAAAAAAGGATATCCTGTGATCGGAAACTATGTCGCTCCAGCCTCGAGCT
GA
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