mRNA_P-wetherbeei_contig7251.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7251.1.1 vs. uniprot
Match: A0A6H5K7J4_9PHAE (Fructose-bisphosphatase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7J4_9PHAE) HSP 1 Score: 114 bits (285), Expect = 2.070e-26 Identity = 81/163 (49.69%), Postives = 96/163 (58.90%), Query Frame = 1
Query: 1 PLDCMDVLLEETYARLAELADRVAVAQRRLARSRAALACTVRVIALLLRCRFSLGDAEHASLVAHLQPDVADDDDCYGGNGSGNGGVEXXXXVDGSGIGWEESVDAAMTHLLRTALAKSAKDEGAAAPAATVAAP-----DTNRLKKHLGIVCARISAGACLV 474
PLD +DV+ EETY RL EL D V AQ RLA S A L C VR++ALL + RF L +H L+AHL PDV + +D GWEESVDAA+THLLRT+LAK AKD AA P+A P DT +LKKHL IV R++ GA LV
Sbjct: 967 PLDSLDVVSEETYQRLVELCDGVERAQDRLAVSAARLGCAVRLVALLAQHRFQLSCKDHELLLAHLYPDVTNTED----------------------QGWEESVDAAVTHLLRTSLAKVAKD--AAPPSAGQTPPLSMPADTVKLKKHLSIVFDRLNKGARLV 1105
BLAST of mRNA_P-wetherbeei_contig7251.1.1 vs. uniprot
Match: D8LTW5_ECTSI (Bardet-Biedl syndrome 9, parathyroid hormone-responsive B1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTW5_ECTSI) HSP 1 Score: 109 bits (273), Expect = 8.190e-25 Identity = 79/163 (48.47%), Postives = 95/163 (58.28%), Query Frame = 1
Query: 1 PLDCMDVLLEETYARLAELADRVAVAQRRLARSRAALACTVRVIALLLRCRFSLGDAEHASLVAHLQPDVADDDDCYGGNGSGNGGVEXXXXVDGSGIGWEESVDAAMTHLLRTALAKSAKDEGAAAPAATVAAP-----DTNRLKKHLGIVCARISAGACLV 474
PLD +DV+ EETY RL EL D V AQ RLA S A L C VR++ALL + RF L +H L+AHL PDV + ++ GWEESV AA+THLLRT+LAK AKD AA P+A P DT +LKKHL IV R++ GA LV
Sbjct: 891 PLDSLDVVSEETYQRLVELCDGVERAQDRLAVSAARLGCAVRLVALLAQHRFQLPCKDHTLLLAHLYPDVTNTEE----------------------QGWEESVHAAVTHLLRTSLAKVAKD--AAPPSAGQTPPLSMPADTVKLKKHLSIVFDRLNKGARLV 1029
BLAST of mRNA_P-wetherbeei_contig7251.1.1 vs. uniprot
Match: A0A7S2G715_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G715_9STRA) HSP 1 Score: 100 bits (249), Expect = 1.350e-21 Identity = 64/159 (40.25%), Postives = 93/159 (58.49%), Query Frame = 1
Query: 1 PLDCMDVLLEETYARLAELADRVAVAQRRLARSRAALACTVRVIALLLRCRFSLGDAEHASLVAHLQPDVADDDDCYGGNGSGNGGVEXXXXVDGSGIGWEESVDAAMTHLLRTALAKSAKDEGAAAPAATVAAPDTNRLKKHLGIVCARISAGACLVS 477
PL+ +DVL+EET++ + E+AD+++ QRRLA++ AL+CT +I +L + RFSL D + + L +L P+V D D GWEESVDAA+THLL+T LAKS+K+ V DT RLK+H+ I+ R+S G L +
Sbjct: 758 PLNNLDVLMEETHSDVMEVADKISSLQRRLAKASNALSCTTNIIIMLAQFRFSLSDEDVSILRTYLTPNVRDMD----------------------AQGWEESVDAALTHLLKTTLAKSSKESTVVVNQPLVMPKDTMRLKRHIQIMFDRLSKGISLTA 894
BLAST of mRNA_P-wetherbeei_contig7251.1.1 vs. uniprot
Match: A0A7S3YME0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YME0_HETAK) HSP 1 Score: 99.8 bits (247), Expect = 1.920e-21 Identity = 67/154 (43.51%), Postives = 86/154 (55.84%), Query Frame = 1
Query: 1 PLDCMDVLLEETYARLAELADRVAVAQRRLARSRAALACTVRVIALLLRCRFSLGDAEHASLVAHLQPDVADDDDCYGGNGSGNGGVEXXXXVDGSGIGWEESVDAAMTHLLRTALAKSAKDEGAAAPAATVAAPDTNRLKKHLGIVCARISAG 462
PL +DVL+EETY RL ELA V AQ L R+ L+CT R+I +L+R RF L D L A+ P+V VD GWEE VDAAMT+LLRTALAK+ K+ P+ + A DT +L+KH+ IVC R++ G
Sbjct: 314 PLAALDVLMEETYKRLLELAGEVEAAQAALRRAANRLSCTARLILMLVRYRFGLDDTNFNILSANFCPEV----------------------VDNPEQGWEELVDAAMTYLLRTALAKTQKETALLQPSVAMPA-DTAKLRKHISIVCDRLNKG 444
BLAST of mRNA_P-wetherbeei_contig7251.1.1 vs. uniprot
Match: A0A7S2UYB3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYB3_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 4.570e-20 Identity = 62/157 (39.49%), Postives = 90/157 (57.32%), Query Frame = 1
Query: 1 PLDCMDVLLEETYARLAELADRVAVAQRRLARSRAALACTVRVIALLLRCRFSLGDAEHASLVAHLQPDVADDDDCYGGNGSGNGGVEXXXXVDGSGIGWEESVDAAMTHLLRTALAKSAKDEGAAAPAATVAAPDTNRLKKHLGIVCARISAGACL 471
PL +D L+EE+Y RL ELA++V Q+RL + AL+CT +I +L+R RF L D + L AH P V +DC + GWEE VDA+MT+LLRT LAK+ K+ + ++ + DT +++KH+ IVC R++ GA L
Sbjct: 65 PLAHLDTLMEESYKRLLELANQVEGVQKRLKLAANALSCTTYLILMLIRYRFGLDDKNYDMLEAHFCPQV---NDC-------------------AEQGWEEIVDASMTYLLRTVLAKNVKETAVVQQSVSMPS-DTTKMRKHISIVCDRLNKGARL 198
BLAST of mRNA_P-wetherbeei_contig7251.1.1 vs. uniprot
Match: A0A7S2WDC7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WDC7_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 9.860e-20 Identity = 64/160 (40.00%), Postives = 92/160 (57.50%), Query Frame = 1
Query: 1 PLDCMDVLLEETYARLAELADRVAVAQRRLARSRAALACTVRVIALLLRCRFSLGDAEHASLVAHLQPDVADDDDCYGGNGSGNGGVEXXXXVDGSGIGWEESVDAAMTHLLRTALAKSAKDEGAAAPAATVAAPDTNRLKKHLGIVCARISAGACLVSG 480
PL +D +L ET+ ++ EL RV AQRRL R+ AL+CT ++ LL++ F+LG+ + L L P V D+ D GWEE VDAA+THLL+T+LAK+AK+ A ++ DT++LK+H+ IVC R++ GA L SG
Sbjct: 564 PLAQLDEVLSETHQQIVELGHRVEEAQRRLKRAANALSCTTGLVLLLIQFCFALGEEDMEVLRTFLTPQVQDNVD----------------------QGWEEQVDAALTHLLKTSLAKTAKEASMLAQPLSMPR-DTSKLKRHITIVCDRLAKGAMLASG 700
BLAST of mRNA_P-wetherbeei_contig7251.1.1 vs. uniprot
Match: A0A6A5AHR9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AHR9_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 5.860e-19 Identity = 64/163 (39.26%), Postives = 87/163 (53.37%), Query Frame = 1
Query: 1 PLDCMDVLLEETYARLAELADRVAVAQRRLARSRAALACTVRVIALLLRCRFSLGDAEHASLVAHLQPDVADDDDCYGGNGSGNGGVEXXXXVDGSGIGWEESVDAAMTHLLRTALAKSAKDEGAAA--PAATVAAPDTNRLKKHLGIVCARISAGACLVSGS 483
PL+C+D+LL TY++L +L+ RV Q ++ S LAC+V ++ +L+R +F L D A L AHL P VAD WEES + AMT LL+TALA ++ A A P V DT +LKKH+ IVC R+S G LV G+
Sbjct: 280 PLNCLDMLLHGTYSQLLDLSRRVDHVQGKVHVSANRLACSVHLLLMLIRYKFDLDDDNFAVLSAHLSPRVAD--------------------------AWEESTETAMTDLLKTALAVKKENAAAVAGVPVELVLPEDTKKLKKHITIVCDRLSKGGRLVGGA 416
BLAST of mRNA_P-wetherbeei_contig7251.1.1 vs. uniprot
Match: A0A383VDZ0_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VDZ0_TETOB) HSP 1 Score: 92.8 bits (229), Expect = 6.550e-19 Identity = 66/161 (40.99%), Postives = 89/161 (55.28%), Query Frame = 1
Query: 1 PLDCMDVLLEETYARLAELADRVAVAQRRLARSRAALACTVRVIALLLRCRFSLGDAEHASLVAHLQPDVADDDDCYGGNGSGNGGVEXXXXVDGSGIGWEESVDAAMTHLLRTALAKSAKDEGAAAPAATVAAPDTNRLKKHLGIVCARISAGACLVSGS 483
PL+ +DVL+EETY ++ +LA ++ Q L + AL V+++ LL R RF L E L L P V ++G + WEE+ +AAMTHLLR+ALA+SAKD AA P AA DT RLKKH+ +V R+S G LV+GS
Sbjct: 770 PLNQLDVLMEETYDQILDLATQMEQLQAELLAAGQALGAGVQLLLLLTRFRFKLAAEESELLRCALSPVV----------------------LEGPEVSWEETTEAAMTHLLRSALARSAKDAAAAVPPLAPAA-DTARLKKHISLVLERLSKGMRLVAGS 907
BLAST of mRNA_P-wetherbeei_contig7251.1.1 vs. uniprot
Match: A0A397FEJ0_9STRA (Uncharacterized protein n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397FEJ0_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 8.390e-19 Identity = 64/164 (39.02%), Postives = 87/164 (53.05%), Query Frame = 1
Query: 1 PLDCMDVLLEETYARLAELADRVAVAQRRLARSRAALACTVRVIALLLRCRFSLGDAEHASLVAHLQPDVADDDDCYGGNGSGNGGVEXXXXVDGSGIGWEESVDAAMTHLLRTALAKSAKDEGAAA---PAATVAAPDTNRLKKHLGIVCARISAGACLVSGS 483
PL+C+D+LL TY++L +L+ RV Q ++ S LAC+V ++ +L+R +F L D A L AHL P VAD WEES + AMT LL+TALA ++ A A P V DT +LKKH+ IVC R+S G LV G+
Sbjct: 466 PLNCLDMLLHGTYSQLLDLSRRVDHVQSKVHVSANRLACSVHLLLMLIRYKFDLDDDNFAVLSAHLSPRVAD--------------------------AWEESTETAMTDLLKTALAVKKENAAAVAVGVPVELVLPEDTKKLKKHITIVCDRLSKGGRLVGGA 603
BLAST of mRNA_P-wetherbeei_contig7251.1.1 vs. uniprot
Match: A0A8J4CF38_9CHLO (Uncharacterized protein n=3 Tax=Volvox TaxID=3066 RepID=A0A8J4CF38_9CHLO) HSP 1 Score: 91.3 bits (225), Expect = 2.280e-18 Identity = 63/159 (39.62%), Postives = 91/159 (57.23%), Query Frame = 1
Query: 1 PLDCMDVLLEETYARLAELADRVAVAQRRLA-RSRAALACTVRVIALLLRCRFSLGDAEHASLVAHLQPDVADDDDCYGGNGSGNGGVEXXXXVDGSGIGWEESVDAAMTHLLRTALAKSAKDEGAAAPAATVAAPDTNRLKKHLGIVCARISAGACLV 474
PL+ +D+L++ETY + +L + AQ LA RSR C V+++ LL+R RF+L +AE L A + P + +DGS IGWEE+ +AAMTHLLRT LAKSAK++ + AA DT RL+KH+ +V R++ G L+
Sbjct: 752 PLNQLDLLMDETYDSIMDLGSAMEAAQTELAVRSRQLSGC-VQLLLLLVRWRFALNEAEFTVLKASISPQI----------------------IDGSEIGWEETTEAAMTHLLRTCLAKSAKEQAVQVTPLS-AAKDTQRLRKHISLVLERMARGMRLL 886 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7251.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7251.1.1 >prot_P-wetherbeei_contig7251.1.1 ID=prot_P-wetherbeei_contig7251.1.1|Name=mRNA_P-wetherbeei_contig7251.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=157bp MDVLLEETYARLAELADRVAVAQRRLARSRAALACTVRVIALLLRCRFSLback to top mRNA from alignment at P-wetherbeei_contig7251:2..484+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7251.1.1 ID=mRNA_P-wetherbeei_contig7251.1.1|Name=mRNA_P-wetherbeei_contig7251.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=483bp|location=Sequence derived from alignment at P-wetherbeei_contig7251:2..484+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7251:2..484+ >mRNA_P-wetherbeei_contig7251.1.1 ID=mRNA_P-wetherbeei_contig7251.1.1|Name=mRNA_P-wetherbeei_contig7251.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=471bp|location=Sequence derived from alignment at P-wetherbeei_contig7251:2..484+ (Phaeothamnion wetherbeei SAG_119_79)back to top |