mRNA_P-wetherbeei_contig7250.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7250.1.1
Unique NamemRNA_P-wetherbeei_contig7250.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig7250.1.1 vs. uniprot
Match: D8LIK7_ECTSI (cGMP-dependent protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIK7_ECTSI)

HSP 1 Score: 63.9 bits (154), Expect = 9.980e-8
Identity = 35/81 (43.21%), Postives = 48/81 (59.26%), Query Frame = 1 
Query:  211 EPMWGYLRNLLKRLLDKDVRQRIDLPQVMRHPWVTLEGSRPPKPLD--DNDDGGDDSFEVTDGDLEEAWSIYPASPAKAQR 447
            +PM GYLR      L+KD     +L   + HPWVT+EGS PP+ L+      G D   +VTDG+L +AW+I+PA+P    R
Sbjct:  896 DPMVGYLR------LEKDPEHPKNLKAAISHPWVTVEGSIPPEGLEALKEPGGKDGELQVTDGELLDAWTIFPATPTPRGR 970
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7250.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LIK7_ECTSI9.980e-843.21cGMP-dependent protein kinase n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7250contigP-wetherbeei_contig7250:51..889 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LIK7
Preferred namespnA
PFAMsPP2C,Pkinase
Model size840
Max annot lvl2759|Eukaryota
KEGG koko:K01090,ko:K07359,ko:K14803,ko:K17500
KEGG Pathwayko04140,ko04152,ko04211,ko04920,ko04921,ko05034,map04140,map04152,map04211,map04920,map04921,map05034
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0000287,GO:0001101,GO:0001726,GO:0001882,GO:0001883,GO:0002682,GO:0002697,GO:0002831,GO:0003674,GO:0003824,GO:0004721,GO:0004722,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006355,GO:0006357,GO:0006464,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006970,GO:0008150,GO:0008152,GO:0009414,GO:0009415,GO:0009628,GO:0009651,GO:0009653,GO:0009719,GO:0009725,GO:0009737,GO:0009889,GO:0009987,GO:0010033,GO:0010035,GO:0010468,GO:0010556,GO:0016020,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0017076,GO:0019001,GO:0019219,GO:0019222,GO:0019538,GO:0030145,GO:0030154,GO:0031252,GO:0031323,GO:0031326,GO:0031347,GO:0032101,GO:0032502,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0033554,GO:0033993,GO:0035639,GO:0036094,GO:0036211,GO:0042221,GO:0042578,GO:0042995,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043618,GO:0043620,GO:0043900,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0048583,GO:0048856,GO:0048869,GO:0050688,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0051716,GO:0060255,GO:0061392,GO:0061416,GO:0065007,GO:0071214,GO:0071470,GO:0071472,GO:0071704,GO:0080090,GO:0080134,GO:0097159,GO:0097305,GO:0097367,GO:0104004,GO:0120025,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901700,GO:1903506,GO:2000112,GO:2001141
Exons1
Evalue1.64e-08
EggNOG OGsCOG0631@1|root,KOG0585@1|root,KOG0585@2759|Eukaryota,KOG0698@2759|Eukaryota
EC2.7.11.17,3.1.3.16
Descriptionprotein serine/threonine phosphatase activity
Cds size837
COG categoryT
BRITEko00000,ko00001,ko01000,ko01001,ko01009,ko03009
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186968.2219086-CDS-P-wetherbeei_contig7250:50..8871683186968.2219086-CDS-P-wetherbeei_contig7250:50..887Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7250 51..887 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7250.1.1prot_P-wetherbeei_contig7250.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7250 51..887 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7250.1.1

>prot_P-wetherbeei_contig7250.1.1 ID=prot_P-wetherbeei_contig7250.1.1|Name=mRNA_P-wetherbeei_contig7250.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=279bp
ADGQPGSGRRRVGSGIHGNFGGMGSLGGGAGGVGMSIGGSAGGAGAGGGI
GNMGGGGGGKGKGGGGGITDEPMWGYLRNLLKRLLDKDVRQRIDLPQVMR
HPWVTLEGSRPPKPLDDNDDGGDDSFEVTDGDLEEAWSIYPASPAKAQRC
NATAPGRTFFGGSSTGCSSGAMAAAGAGTGAGVGGSFLGHGWNGGGVGGR
GNGPMSLDGPAMQRRSLFFPEGVDIATFARQAQAARNDVAAAATAVAGGG
GGSGGFDTLAPLAAMHAASPDHGSNGGGD
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mRNA from alignment at P-wetherbeei_contig7250:51..889+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7250.1.1 ID=mRNA_P-wetherbeei_contig7250.1.1|Name=mRNA_P-wetherbeei_contig7250.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=839bp|location=Sequence derived from alignment at P-wetherbeei_contig7250:51..889+ (Phaeothamnion wetherbeei SAG_119_79)
GCCGACGGGCAGCCCGGCAGCGGCCGCCGGCGCGTCGGCAGCGGCATCCA
CGGCAACTTCGGCGGGATGGGCAGCCTCGGCGGCGGTGCCGGCGGGGTGG
GTATGAGCATTGGCGGCAGCGCCGGCGGCGCGGGCGCGGGCGGTGGGATT
GGCAACATGGGCGGCGGCGGCGGTGGCAAGGGGAAGGGGGGCGGCGGCGG
GATCACGGACGAGCCCATGTGGGGCTACCTCCGGAATTTGCTGAAACGAC
TGCTGGATAAGGACGTCCGGCAGCGCATCGACCTGCCGCAGGTGATGCGC
CACCCGTGGGTCACGCTGGAAGGTTCCCGCCCGCCCAAGCCGCTCGACGA
TAACGATGATGGCGGCGATGACAGCTTCGAGGTGACTGATGGCGACCTCG
AGGAAGCCTGGTCCATCTACCCGGCGTCGCCGGCCAAGGCACAGCGATGC
AACGCGACCGCCCCCGGCAGGACGTTCTTCGGCGGCAGCAGCACGGGCTG
CAGCAGCGGGGCGATGGCGGCCGCTGGCGCCGGCACTGGCGCCGGCGTGG
GCGGCTCCTTCCTCGGCCATGGCTGGAATGGGGGCGGCGTCGGTGGGCGG
GGCAACGGGCCAATGTCGCTGGACGGACCGGCGATGCAGCGCCGCAGCCT
CTTCTTCCCGGAAGGCGTCGACATCGCTACTTTCGCCAGGCAGGCTCAAG
CGGCGCGCAACGACGTCGCCGCCGCCGCCACGGCCGTCGCCGGCGGCGGC
GGAGGATCCGGAGGGTTTGACACGCTGGCCCCGCTCGCAGCAATGCACGC
TGCATCGCCTGACCACGGTAGCAATGGTGGTGGCGACGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig7250:51..889+

>mRNA_P-wetherbeei_contig7250.1.1 ID=mRNA_P-wetherbeei_contig7250.1.1|Name=mRNA_P-wetherbeei_contig7250.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=837bp|location=Sequence derived from alignment at P-wetherbeei_contig7250:51..889+ (Phaeothamnion wetherbeei SAG_119_79)
GCCGACGGGCAGCCCGGCAGCGGCCGCCGGCGCGTCGGCAGCGGCATCCA
CGGCAACTTCGGCGGGATGGGCAGCCTCGGCGGCGGTGCCGGCGGGGTGG
GTATGAGCATTGGCGGCAGCGCCGGCGGCGCGGGCGCGGGCGGTGGGATT
GGCAACATGGGCGGCGGCGGCGGTGGCAAGGGGAAGGGGGGCGGCGGCGG
GATCACGGACGAGCCCATGTGGGGCTACCTCCGGAATTTGCTGAAACGAC
TGCTGGATAAGGACGTCCGGCAGCGCATCGACCTGCCGCAGGTGATGCGC
CACCCGTGGGTCACGCTGGAAGGTTCCCGCCCGCCCAAGCCGCTCGACGA
TAACGATGATGGCGGCGATGACAGCTTCGAGGTGACTGATGGCGACCTCG
AGGAAGCCTGGTCCATCTACCCGGCGTCGCCGGCCAAGGCACAGCGATGC
AACGCGACCGCCCCCGGCAGGACGTTCTTCGGCGGCAGCAGCACGGGCTG
CAGCAGCGGGGCGATGGCGGCCGCTGGCGCCGGCACTGGCGCCGGCGTGG
GCGGCTCCTTCCTCGGCCATGGCTGGAATGGGGGCGGCGTCGGTGGGCGG
GGCAACGGGCCAATGTCGCTGGACGGACCGGCGATGCAGCGCCGCAGCCT
CTTCTTCCCGGAAGGCGTCGACATCGCTACTTTCGCCAGGCAGGCTCAAG
CGGCGCGCAACGACGTCGCCGCCGCCGCCACGGCCGTCGCCGGCGGCGGC
GGAGGATCCGGAGGGTTTGACACGCTGGCCCCGCTCGCAGCAATGCACGC
TGCATCGCCTGACCACGGTAGCAATGGTGGTGGCGAC
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