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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 1157 |
| Hectar predicted targeting category | mitochondrion |
| Exons | 3 |
| Ec32 ortholog description | expressed unknown protein |
| Ec32 ortholog | Ec-06_003750.1 |
| Cds size | 888 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1683186967.483931-UTR-P-wetherbeei_contig7237:157..368 | 1683186967.483931-UTR-P-wetherbeei_contig7237:157..368 | Phaeothamnion wetherbeei SAG_119_79 | UTR | P-wetherbeei_contig7237 158..368 - |
| 1683186967.524272-UTR-P-wetherbeei_contig7237:1497..1555 | 1683186967.524272-UTR-P-wetherbeei_contig7237:1497..1555 | Phaeothamnion wetherbeei SAG_119_79 | UTR | P-wetherbeei_contig7237 1498..1555 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1683186967.4926474-CDS-P-wetherbeei_contig7237:368..620 | 1683186967.4926474-CDS-P-wetherbeei_contig7237:368..620 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig7237 369..620 - |
| 1683186967.5004091-CDS-P-wetherbeei_contig7237:748..1159 | 1683186967.5004091-CDS-P-wetherbeei_contig7237:748..1159 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig7237 749..1159 - |
| 1683186967.5081596-CDS-P-wetherbeei_contig7237:1272..1497 | 1683186967.5081596-CDS-P-wetherbeei_contig7237:1272..1497 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig7237 1273..1497 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7237.1.2 >prot_P-wetherbeei_contig7237.1.2 ID=prot_P-wetherbeei_contig7237.1.2|Name=mRNA_P-wetherbeei_contig7237.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=296bp
MKLAGPMCALCAASGTCAFQRGPAPSLLGAVSSARARNTAPPAWARGRRA
TMVSDAPAKADALGKSSEGVTAGKEGEVSFKLDTEVDEVYPVRGYDGAFK
RSVRRASARFAVDAPPADATDAPTPARPMLRVLVVGGGTAERRVVENVAA
RDAMVCGLYVTWDDTVVPLDEAVAEVPFTNLYRCEQPGDPAEVARLAAFI
AADIVIVGSSYEGKANFVSGLRDALPSEALFLDPAAAAAIAGGDLDSFVA
VAEAKRDAMAVELAALREIEAAEEAEAAAAAAAEAATEVGATATA* back to topmRNA from alignment at P-wetherbeei_contig7237:158..1555- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-wetherbeei_contig7237.1.2 ID=mRNA_P-wetherbeei_contig7237.1.2|Name=mRNA_P-wetherbeei_contig7237.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1398bp|location=Sequence derived from alignment at P-wetherbeei_contig7237:158..1555- (Phaeothamnion wetherbeei SAG_119_79)
CCACCTTTTCTTAAACATTGCCTGGGAGTTCTGAGGTGGCCAAAGCTCTC
TGTCGAAGATGAAACTCGCGGGACCGATGTGCGCCTTGTGCGCGGCCTCT
GGCACTTGCGCTTTCCAAAGAGGACCTGCGCCTTCGTTATTAGGGGCCGT
AAGCTCCGCAAGGGCAAGAAACACGGCTCCACCAGCGTGGGCAAGGGGAC
GGCGGGCGACAATGGTGTCCGATGCGCCTGCAAAGGCCGACGCACTGGGG
AAGAGCTCAGAAGGCGTAACGGCTGGGAAAGAGGCAAGTTTTCCCCATCT
TTTGCTCTGTCTTGGCGCCTCTCTTTATACCAGCAACCCTTCTGCAACTT
GATCACAAGGGCCCCTGCTTCTCCTTTTCTTTTCGTCTGTCTTCAGGGCG
AGGTTAGCTTCAAGCTCGACACGGAAGTCGACGAGGTCTACCCCGTCCGC
GGCTACGACGGCGCCTTCAAGCGCTCGGTCAGACGCGCCTCGGCCCGTTT
CGCCGTAGACGCTCCCCCTGCCGATGCCACCGATGCCCCCACCCCCGCCC
GCCCGATGCTGCGCGTGCTTGTCGTCGGTGGCGGCACCGCCGAGCGTCGC
GTCGTCGAGAACGTTGCCGCCCGGGATGCAATGGTCTGCGGTCTTTATGT
TACATGGGACGACACTGTCGTGCCGCTGGATGAGGCAGTGGCGGAGGTGC
CCTTCACGAACTTGTACCGCTGTGAGCAGCCCGGGGACCCAGCGGAAGTA
GCGCGGCTGGCGGCGTTCATCGCGGCCGACATTGTCATTGTGGGGAGCTC
TTATGAGGTGCGTTGTTGCAGACATTGCTGAGCATTCTTTTCTGAGCTAT
TGGCGTTCCTTCATGGCTGTCTTTTGGAAGTAATGTTTATGTGCGCTTTT
TTACCAATATTTTCGAGATGCCGCAACCACCACAGGGCAAGGCCAACTTT
GTGAGCGGCCTGCGGGACGCGCTTCCCTCGGAGGCGCTGTTTCTGGACCC
GGCGGCGGCCGCCGCCATCGCCGGAGGCGACTTGGATTCCTTCGTCGCCG
TAGCGGAGGCCAAGCGGGATGCCATGGCGGTGGAACTGGCGGCGCTGCGG
GAGATTGAGGCCGCCGAAGAGGCGGAAGCCGCGGCAGCGGCGGCGGCGGA
GGCGGCCACGGAGGTGGGGGCGACAGCGACCGCATAGCACCGGTGGCGCA
GCATCGTTGCTGACGGCAGCCAGCGGCACTGCTGCTCTGGACGATTCAAT
TCGTTCATTGGAGAGGAGGTGTTGTTTAGGAACGACTGGTACTGGTTAGA
AAGAAAGTGTGCTTCAGCGGCGTTGGCGCCTCTGCCACAAGAGACAAAAC
CTAGCAAGCGGTATACACGCATAAGAGAAGATCTTGGGTCATTCATCG back to topCoding sequence (CDS) from alignment at P-wetherbeei_contig7237:158..1555- >mRNA_P-wetherbeei_contig7237.1.2 ID=mRNA_P-wetherbeei_contig7237.1.2|Name=mRNA_P-wetherbeei_contig7237.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=888bp|location=Sequence derived from alignment at P-wetherbeei_contig7237:158..1555- (Phaeothamnion wetherbeei SAG_119_79)
ATGAAACTCGCGGGACCGATGTGCGCCTTGTGCGCGGCCTCTGGCACTTG
CGCTTTCCAAAGAGGACCTGCGCCTTCGTTATTAGGGGCCGTAAGCTCCG
CAAGGGCAAGAAACACGGCTCCACCAGCGTGGGCAAGGGGACGGCGGGCG
ACAATGGTGTCCGATGCGCCTGCAAAGGCCGACGCACTGGGGAAGAGCTC
AGAAGGCGTAACGGCTGGGAAAGAGGGCGAGGTTAGCTTCAAGCTCGACA
CGGAAGTCGACGAGGTCTACCCCGTCCGCGGCTACGACGGCGCCTTCAAG
CGCTCGGTCAGACGCGCCTCGGCCCGTTTCGCCGTAGACGCTCCCCCTGC
CGATGCCACCGATGCCCCCACCCCCGCCCGCCCGATGCTGCGCGTGCTTG
TCGTCGGTGGCGGCACCGCCGAGCGTCGCGTCGTCGAGAACGTTGCCGCC
CGGGATGCAATGGTCTGCGGTCTTTATGTTACATGGGACGACACTGTCGT
GCCGCTGGATGAGGCAGTGGCGGAGGTGCCCTTCACGAACTTGTACCGCT
GTGAGCAGCCCGGGGACCCAGCGGAAGTAGCGCGGCTGGCGGCGTTCATC
GCGGCCGACATTGTCATTGTGGGGAGCTCTTATGAGGGCAAGGCCAACTT
TGTGAGCGGCCTGCGGGACGCGCTTCCCTCGGAGGCGCTGTTTCTGGACC
CGGCGGCGGCCGCCGCCATCGCCGGAGGCGACTTGGATTCCTTCGTCGCC
GTAGCGGAGGCCAAGCGGGATGCCATGGCGGTGGAACTGGCGGCGCTGCG
GGAGATTGAGGCCGCCGAAGAGGCGGAAGCCGCGGCAGCGGCGGCGGCGG
AGGCGGCCACGGAGGTGGGGGCGACAGCGACCGCATAG back to top
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