mRNA_P-wetherbeei_contig7209.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7209.1.1 vs. uniprot
Match: A0A6V1NRX8_HETAK (Ubiquitinyl hydrolase 1 (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NRX8_HETAK) HSP 1 Score: 90.5 bits (223), Expect = 6.800e-20 Identity = 45/66 (68.18%), Postives = 54/66 (81.82%), Query Frame = 1
Query: 1 MVKVSVKWNKETY-DVDLDAGESVQTFKTQLWTLTGVPVERQKLMSKKGGWKGILKDDEDFSKLGL 195
MVKV+VKWNK+ + D++LD ESV+TFKTQLWTLT VPVERQKLM++ G W G LK+D DFSK L
Sbjct: 1 MVKVNVKWNKQVFSDLELDENESVETFKTQLWTLTSVPVERQKLMAR-GAWVGTLKNDADFSKCKL 65
BLAST of mRNA_P-wetherbeei_contig7209.1.1 vs. uniprot
Match: A0A8J4PV05_9MYCE (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PV05_9MYCE) HSP 1 Score: 79.0 bits (193), Expect = 1.300e-15 Identity = 41/66 (62.12%), Postives = 50/66 (75.76%), Query Frame = 1
Query: 1 MVKVSVKWNKETYDVDLDAGESVQTFKTQLWTLTGVPVERQKLMSKKGGWKGILKDDEDFSKLGLT 198
MVKV VKWNKE Y+VD+D ++V+ FKTQL++LT VPVERQK+M KGG ILKDD + L LT
Sbjct: 1 MVKVVVKWNKEKYEVDVDPTQNVECFKTQLFSLTCVPVERQKIMGFKGG---ILKDDAQWKDLDLT 63
BLAST of mRNA_P-wetherbeei_contig7209.1.1 vs. uniprot
Match: A0A151Z6N4_9MYCE (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151Z6N4_9MYCE) HSP 1 Score: 78.6 bits (192), Expect = 1.780e-15 Identity = 38/66 (57.58%), Postives = 51/66 (77.27%), Query Frame = 1
Query: 1 MVKVSVKWNKETYDVDLDAGESVQTFKTQLWTLTGVPVERQKLMSKKGGWKGILKDDEDFSKLGLT 198
MVKV+VKWNKE YDVD+D + FK+QL++LT VPV+RQK+M KGG +LKD D++++GLT
Sbjct: 1 MVKVTVKWNKEKYDVDIDTTQPPSVFKSQLFSLTFVPVDRQKIMGFKGG---VLKDQADWNEVGLT 63
BLAST of mRNA_P-wetherbeei_contig7209.1.1 vs. uniprot
Match: Q55BC4_DICDI (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q55BC4_DICDI) HSP 1 Score: 78.6 bits (192), Expect = 1.800e-15 Identity = 40/66 (60.61%), Postives = 49/66 (74.24%), Query Frame = 1
Query: 1 MVKVSVKWNKETYDVDLDAGESVQTFKTQLWTLTGVPVERQKLMSKKGGWKGILKDDEDFSKLGLT 198
MVKV+VKWNKE Y+VD+D E V +FK QL++LT VP+ERQK+M KGG ILKDD + L LT
Sbjct: 1 MVKVNVKWNKEKYEVDVDPSEPVSSFKGQLYSLTMVPIERQKIMGFKGG---ILKDDAQWKDLDLT 63
BLAST of mRNA_P-wetherbeei_contig7209.1.1 vs. uniprot
Match: F0ZFW8_DICPU (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZFW8_DICPU) HSP 1 Score: 78.2 bits (191), Expect = 2.450e-15 Identity = 40/66 (60.61%), Postives = 49/66 (74.24%), Query Frame = 1
Query: 1 MVKVSVKWNKETYDVDLDAGESVQTFKTQLWTLTGVPVERQKLMSKKGGWKGILKDDEDFSKLGLT 198
MVKV+VKWNK+ Y+VD+D ESV FK QL++LT VPVERQK+M KGG ILKD+ + L LT
Sbjct: 1 MVKVNVKWNKDKYEVDIDPNESVAEFKAQLFSLTMVPVERQKIMGFKGG---ILKDESQWKDLDLT 63
BLAST of mRNA_P-wetherbeei_contig7209.1.1 vs. uniprot
Match: A0A5D6YB19_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YB19_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 6.240e-15 Identity = 42/67 (62.69%), Postives = 48/67 (71.64%), Query Frame = 1
Query: 1 MVKVSVKWNKETY-DVDLDAGESVQTFKTQLWTLTGVPVERQKLMSKKGGWKGILKDDEDFSKLGLT 198
+V VSVKW K+ + DV LD ESV T K QL+ LT VPVERQKLMSK WKG+LKDD D S+L L
Sbjct: 4 VVHVSVKWGKQVFADVPLDTSESVATLKAQLYALTLVPVERQKLMSK--AWKGMLKDDADLSQLKLA 68
BLAST of mRNA_P-wetherbeei_contig7209.1.1 vs. uniprot
Match: A0A7S1SKD1_9CHLO (Ubiquitinyl hydrolase 1 (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SKD1_9CHLO) HSP 1 Score: 75.5 bits (184), Expect = 1.820e-14 Identity = 40/66 (60.61%), Postives = 51/66 (77.27%), Query Frame = 1
Query: 1 MVKVSVKWNKETY-DVDLDAGESVQTFKTQLWTLTGVPVERQKLMSKKGGWKGILKDDEDFSKLGL 195
MVKV+VKW KET+ DV++D G+ FKTQL+TL+GVP ERQK+M K G+LKDD D++KLGL
Sbjct: 30 MVKVNVKWQKETFKDVEVDEGQPPLVFKTQLFTLSGVPPERQKIMVK----GGLLKDDGDWAKLGL 91
BLAST of mRNA_P-wetherbeei_contig7209.1.1 vs. uniprot
Match: A0A2P6VRA1_9CHLO (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VRA1_9CHLO) HSP 1 Score: 74.7 bits (182), Expect = 4.090e-14 Identity = 38/65 (58.46%), Postives = 49/65 (75.38%), Query Frame = 1
Query: 4 VKVSVKWNKETY-DVDLDAGESVQTFKTQLWTLTGVPVERQKLMSKKGGWKGILKDDEDFSKLGL 195
VKV VKW KE + DV++D G+ FKTQL++LTGVP ERQK+M KGG +LKDD D++KLG+
Sbjct: 4 VKVEVKWGKEAFKDVEIDLGQPPSVFKTQLFSLTGVPPERQKIMGVKGG---LLKDDADWAKLGV 65
BLAST of mRNA_P-wetherbeei_contig7209.1.1 vs. uniprot
Match: K3WGB7_GLOUD (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WGB7_GLOUD) HSP 1 Score: 73.9 bits (180), Expect = 7.610e-14 Identity = 39/64 (60.94%), Postives = 46/64 (71.88%), Query Frame = 1
Query: 1 MVKVSVKWNKETY-DVDLDAGESVQTFKTQLWTLTGVPVERQKLMSKKGGWKGILKDDEDFSKL 189
MV VSVKW K+ + D+ +D G SV T K QL+ LT VPVERQKLMSK WKG+LKDD D + L
Sbjct: 1 MVSVSVKWGKQVFNDIPVDKGASVATLKAQLYALTFVPVERQKLMSK--AWKGMLKDDADLAAL 62
BLAST of mRNA_P-wetherbeei_contig7209.1.1 vs. uniprot
Match: A0A484DTD2_BRELC (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DTD2_BRELC) HSP 1 Score: 73.9 bits (180), Expect = 7.620e-14 Identity = 39/62 (62.90%), Postives = 46/62 (74.19%), Query Frame = 1
Query: 7 KVSVKWNKETY-DVDLDAGESVQTFKTQLWTLTGVPVERQKLMSKKGGWKGILKDDEDFSKL 189
KVSVKW K+ + DV++D +V FK QL+ LT VPVERQKLMSK WKG+LKDD D SKL
Sbjct: 4 KVSVKWGKQVFPDVEVDKTSNVSVFKAQLYALTFVPVERQKLMSK--AWKGMLKDDMDLSKL 63 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7209.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7209.1.1 >prot_P-wetherbeei_contig7209.1.1 ID=prot_P-wetherbeei_contig7209.1.1|Name=mRNA_P-wetherbeei_contig7209.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=66bp MVKVSVKWNKETYDVDLDAGESVQTFKTQLWTLTGVPVERQKLMSKKGGWback to top mRNA from alignment at P-wetherbeei_contig7209:1..198- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7209.1.1 ID=mRNA_P-wetherbeei_contig7209.1.1|Name=mRNA_P-wetherbeei_contig7209.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=198bp|location=Sequence derived from alignment at P-wetherbeei_contig7209:1..198- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7209:1..198- >mRNA_P-wetherbeei_contig7209.1.1 ID=mRNA_P-wetherbeei_contig7209.1.1|Name=mRNA_P-wetherbeei_contig7209.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=198bp|location=Sequence derived from alignment at P-wetherbeei_contig7209:1..198- (Phaeothamnion wetherbeei SAG_119_79)back to top |