mRNA_P-wetherbeei_contig7193.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7193.1.1
Unique NamemRNA_P-wetherbeei_contig7193.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig7193.1.1 vs. uniprot
Match: A0A6H5KVF1_9PHAE (Magnesium transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KVF1_9PHAE)

HSP 1 Score: 65.5 bits (158), Expect = 5.470e-11
Identity = 29/57 (50.88%), Postives = 45/57 (78.95%), Query Frame = 1
Query:    1 MAQELRCPLRDLRLIDPSFPGLYPAVVSRRSAIILSILKVKAIIRADELLIFNPDSD 171
            +A +L CPLRDLR+ DP+FPG +P+V++RR +II S+ +VKA+I ++E+L+F    D
Sbjct:  169 LAAKLNCPLRDLRMADPTFPGQFPSVLARRGSIIFSVGEVKAVILSNEVLLFPTKPD 225          
BLAST of mRNA_P-wetherbeei_contig7193.1.1 vs. uniprot
Match: A0A835ZID1_9STRA (Magnesium transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZID1_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 1.740e-9
Identity = 27/51 (52.94%), Postives = 40/51 (78.43%), Query Frame = 1
Query:   25 LRDLRLIDPSFPGLYPAVVSRRSAIILSILKVKAIIRADELLIFNPDSDDA 177
            +RDLRL+DPSFPG YPAV+SR++AI++S   ++A+I A E+ + NP   +A
Sbjct:    1 MRDLRLMDPSFPGQYPAVLSRKNAILVSASNIRAVITASEVYLGNPSHKEA 51          
BLAST of mRNA_P-wetherbeei_contig7193.1.1 vs. uniprot
Match: A0A4D9D8F3_9STRA (Magnesium transporter n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D8F3_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 1.120e-8
Identity = 25/59 (42.37%), Postives = 43/59 (72.88%), Query Frame = 1
Query:    1 MAQELRCPLRDLRLIDPSFPGLYPAVVSRRSAIILSILKVKAIIRADELLIFNPDSDDA 177
            +A ELRCP RDLR++D SFP      ++R++AI++ + +++ +IR DEL++F+P +  A
Sbjct:  274 LAVELRCPTRDLRILDTSFPSSVATFLARKNAIVVRMDRIRCVIRRDELMLFDPYNQGA 332          
BLAST of mRNA_P-wetherbeei_contig7193.1.1 vs. uniprot
Match: A0A1E4TJL5_9ASCO (Magnesium transporter n=1 Tax=Tortispora caseinolytica NRRL Y-17796 TaxID=767744 RepID=A0A1E4TJL5_9ASCO)

HSP 1 Score: 52.0 bits (123), Expect = 3.140e-6
Identity = 22/44 (50.00%), Postives = 37/44 (84.09%), Query Frame = 1
Query:   28 RDLRLIDPSFPGLYPAVVSRRSAIILSILKVKAIIRADELLIFN 159
            RDLR IDPS   L P+++ R ++I+L++L+++A+I++DE+LIFN
Sbjct:   99 RDLRKIDPSIRSLVPSILVRENSILLNLLQIRALIKSDEVLIFN 142          
BLAST of mRNA_P-wetherbeei_contig7193.1.1 vs. uniprot
Match: A0A482SVM6_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SVM6_9ARCH)

HSP 1 Score: 51.2 bits (121), Expect = 5.850e-6
Identity = 23/59 (38.98%), Postives = 40/59 (67.80%), Query Frame = 1
Query:    1 MAQELRCPLRDLRLIDPSFPG-LYPAVVSRRSAIILSILKVKAIIRADELLIFNPDSDD 174
            +A +L  PLRDLR+IDP+FP  +  A ++R  AI+ ++  +K ++  D+ ++FNP + D
Sbjct:  124 LANDLHLPLRDLRVIDPTFPNQIQAAFLARPRAILFTLESIKVVVLPDQAIVFNPFNPD 182          
BLAST of mRNA_P-wetherbeei_contig7193.1.1 vs. uniprot
Match: UPI001E8CD9F8 (cora-domain-containing protein n=1 Tax=Filobasidium floriforme TaxID=5210 RepID=UPI001E8CD9F8)

HSP 1 Score: 50.4 bits (119), Expect = 1.090e-5
Identity = 23/45 (51.11%), Postives = 35/45 (77.78%), Query Frame = 1
Query:   28 RDLRLIDPSFPGLYPAVVSRRSAIILSILKVKAIIRADELLIFNP 162
            RDLR +D   P L P ++SRRSAII+++L V+A+I+AD +++F P
Sbjct:   41 RDLRKLDSLQPNLVPTILSRRSAIIVNMLHVRALIKADMVILFEP 85          
BLAST of mRNA_P-wetherbeei_contig7193.1.1 vs. uniprot
Match: J6F453_TRIAS (Magnesium transporter n=2 Tax=Trichosporon asahii var. asahii TaxID=189963 RepID=J6F453_TRIAS)

HSP 1 Score: 49.7 bits (117), Expect = 2.060e-5
Identity = 22/45 (48.89%), Postives = 33/45 (73.33%), Query Frame = 1
Query:   28 RDLRLIDPSFPGLYPAVVSRRSAIILSILKVKAIIRADELLIFNP 162
            RDLR +D   P L P +++ RS I++SIL +KA+I+ D ++IFNP
Sbjct:  126 RDLRKLDSITPSLVPVILTTRSCILISILHLKALIKPDRVIIFNP 170          
BLAST of mRNA_P-wetherbeei_contig7193.1.1 vs. uniprot
Match: A0A1E4U0S4_PACTA (Magnesium transporter (Fragment) n=1 Tax=Pachysolen tannophilus NRRL Y-2460 TaxID=669874 RepID=A0A1E4U0S4_PACTA)

HSP 1 Score: 48.9 bits (115), Expect = 3.790e-5
Identity = 21/50 (42.00%), Postives = 37/50 (74.00%), Query Frame = 1
Query:   28 RDLRLIDPSFPGLYPAVVSRRSAIILSILKVKAIIRADELLIFNPDSDDA 177
            RDLR ID  +  + P+++ R S+I+++IL +KA+I+AD +++FN  S D+
Sbjct:   59 RDLRKIDKGYDDIVPSILIRPSSILINILHIKALIKADSVVLFNHGSSDS 108          
BLAST of mRNA_P-wetherbeei_contig7193.1.1 vs. uniprot
Match: A0A8H3TPG4_9TREE (Magnesium transporter n=1 Tax=Naganishia liquefaciens TaxID=104408 RepID=A0A8H3TPG4_9TREE)

HSP 1 Score: 48.9 bits (115), Expect = 3.830e-5
Identity = 22/44 (50.00%), Postives = 35/44 (79.55%), Query Frame = 1
Query:   28 RDLRLIDPSFPGLYPAVVSRRSAIILSILKVKAIIRADELLIFN 159
            RDLR +D   P L P ++SRRSAII+++L V+A+I+AD +++F+
Sbjct:  109 RDLRKLDSLQPNLVPTILSRRSAIIINMLHVRALIKADTVILFD 152          
BLAST of mRNA_P-wetherbeei_contig7193.1.1 vs. uniprot
Match: A0A286ULE7_9AGAM (Magnesium transporter n=1 Tax=Pyrrhoderma noxium TaxID=2282107 RepID=A0A286ULE7_9AGAM)

HSP 1 Score: 48.5 bits (114), Expect = 5.280e-5
Identity = 20/44 (45.45%), Postives = 34/44 (77.27%), Query Frame = 1
Query:   28 RDLRLIDPSFPGLYPAVVSRRSAIILSILKVKAIIRADELLIFN 159
            RDLR ID   P L P ++SR+ AI+++IL ++A+++AD +L+F+
Sbjct:  216 RDLRKIDSRIPNLVPTILSRKEAILVNILHIRALVKADTVLLFD 259          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7193.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A6H5KVF1_9PHAE5.470e-1150.88Magnesium transporter n=2 Tax=Ectocarpus TaxID=287... [more]
A0A835ZID1_9STRA1.740e-952.94Magnesium transporter n=1 Tax=Tribonema minus TaxI... [more]
A0A4D9D8F3_9STRA1.120e-842.37Magnesium transporter n=1 Tax=Nannochloropsis sali... [more]
A0A1E4TJL5_9ASCO3.140e-650.00Magnesium transporter n=1 Tax=Tortispora caseinoly... [more]
A0A482SVM6_9ARCH5.850e-638.98Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
UPI001E8CD9F81.090e-551.11cora-domain-containing protein n=1 Tax=Filobasidiu... [more]
J6F453_TRIAS2.060e-548.89Magnesium transporter n=2 Tax=Trichosporon asahii ... [more]
A0A1E4U0S4_PACTA3.790e-542.00Magnesium transporter (Fragment) n=1 Tax=Pachysole... [more]
A0A8H3TPG4_9TREE3.830e-550.00Magnesium transporter n=1 Tax=Naganishia liquefaci... [more]
A0A286ULE7_9AGAM5.280e-545.45Magnesium transporter n=1 Tax=Pyrrhoderma noxium T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7193contigP-wetherbeei_contig7193:474..650 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LBW7
Preferred nameMRS2
PFAMsCorA
Model size177
Max annot lvl2759|Eukaryota
KEGG rclassRC00537,RC00983
KEGG koko:K01053,ko:K12765,ko:K16075
KEGG TC1.A.35.5
KEGG ReactionR01519,R02933,R03751
KEGG Pathwayko00030,ko00053,ko00930,ko01100,ko01110,ko01120,ko01130,ko01200,ko01220,ko04113,map00030,map00053,map00930,map01100,map01110,map01120,map01130,map01200,map01220,map04113
KEGG ModuleM00129
Hectar predicted targeting categoryno signal peptide or anchor
GOsGO:0003674,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006082,GO:0006089,GO:0006810,GO:0006811,GO:0006812,GO:0006839,GO:0008150,GO:0008152,GO:0008324,GO:0009987,GO:0015075,GO:0015095,GO:0015318,GO:0015693,GO:0016020,GO:0016021,GO:0019752,GO:0019866,GO:0022857,GO:0022890,GO:0030001,GO:0031090,GO:0031224,GO:0031966,GO:0031967,GO:0031975,GO:0032787,GO:0034220,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045016,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0070838,GO:0071704,GO:0072511,GO:0098655,GO:0098660,GO:0098662,GO:1901615,GO:1903830,GO:1990542
Exons1
Evalue3.45e-12
EggNOG OGsKOG2662@1|root,KOG2662@2759|Eukaryota
EC2.7.11.1,3.1.1.17
Descriptionmagnesium ion transmembrane transporter activity
Cds size177
COG categoryC
BRITEko00000,ko00001,ko00002,ko01000,ko01001,ko02000,ko04147
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186964.4598532-CDS-P-wetherbeei_contig7193:473..6501683186964.4598532-CDS-P-wetherbeei_contig7193:473..650Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7193 474..650 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7193.1.1prot_P-wetherbeei_contig7193.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7193 474..650 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7193.1.1

>prot_P-wetherbeei_contig7193.1.1 ID=prot_P-wetherbeei_contig7193.1.1|Name=mRNA_P-wetherbeei_contig7193.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=59bp
MAQELRCPLRDLRLIDPSFPGLYPAVVSRRSAIILSILKVKAIIRADELL
IFNPDSDDA
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mRNA from alignment at P-wetherbeei_contig7193:474..650-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7193.1.1 ID=mRNA_P-wetherbeei_contig7193.1.1|Name=mRNA_P-wetherbeei_contig7193.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=177bp|location=Sequence derived from alignment at P-wetherbeei_contig7193:474..650- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCACAGGAGCTGCGCTGCCCGCTACGGGACTTGCGGCTCATAGACCC GAGCTTTCCGGGGCTCTACCCGGCCGTGGTGTCGCGGCGGTCGGCCATCA TCCTTTCCATCTTAAAGGTGAAGGCTATCATCCGCGCCGACGAGCTTCTC ATCTTCAATCCCGACTCCGACGACGCC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig7193:474..650-

>mRNA_P-wetherbeei_contig7193.1.1 ID=mRNA_P-wetherbeei_contig7193.1.1|Name=mRNA_P-wetherbeei_contig7193.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=177bp|location=Sequence derived from alignment at P-wetherbeei_contig7193:474..650- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCACAGGAGCTGCGCTGCCCGCTACGGGACTTGCGGCTCATAGACCC
GAGCTTTCCGGGGCTCTACCCGGCCGTGGTGTCGCGGCGGTCGGCCATCA
TCCTTTCCATCTTAAAGGTGAAGGCTATCATCCGCGCCGACGAGCTTCTC
ATCTTCAATCCCGACTCCGACGACGCC
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