mRNA_P-wetherbeei_contig7164.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig7164.1.1
Unique NamemRNA_P-wetherbeei_contig7164.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig7164.1.1 vs. uniprot
Match: A0A1Y1YAC7_9FUNG (SUN domain-containing protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YAC7_9FUNG)

HSP 1 Score: 48.9 bits (115), Expect = 1.410e-5
Identity = 20/39 (51.28%), Postives = 24/39 (61.54%), Query Frame = 1 
Query:    1 LGRCWAFNGDHGRLTVKLARAIEPTHFTISHAPPYAGAD 117
            LGRCWAF G  G+LT++L+R I  T FTI H       D
Sbjct:  101 LGRCWAFPGSQGQLTIQLSRTINATDFTIEHVDQQVAID 139
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BLAST of mRNA_P-wetherbeei_contig7164.1.1 vs. uniprot
Match: A0A2P6NZK6_9EUKA (SUN domain-containing protein 2-like n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NZK6_9EUKA)

HSP 1 Score: 48.9 bits (115), Expect = 1.740e-5
Identity = 18/32 (56.25%), Postives = 26/32 (81.25%), Query Frame = 1 
Query:    1 LGRCWAFNGDHGRLTVKLARAIEPTHFTISHA 96
            +G+CWAF G  GR++++LA+AI PT FT+ HA
Sbjct:  619 IGKCWAFAGQEGRVSIRLAQAIWPTSFTMEHA 650
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BLAST of mRNA_P-wetherbeei_contig7164.1.1 vs. uniprot
Match: A0A2K5D7Y7_AOTNA (Sad1 and UNC84 domain containing 5 n=2 Tax=Aotus nancymaae TaxID=37293 RepID=A0A2K5D7Y7_AOTNA)

HSP 1 Score: 48.9 bits (115), Expect = 1.750e-5
Identity = 17/32 (53.12%), Postives = 23/32 (71.88%), Query Frame = 1 
Query:    4 GRCWAFNGDHGRLTVKLARAIEPTHFTISHAP 99
            G CWAF GDHG +T++LA+ I P+  T+ H P
Sbjct:  249 GNCWAFEGDHGHVTIRLAQKIYPSSLTLQHIP 280
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BLAST of mRNA_P-wetherbeei_contig7164.1.1 vs. uniprot
Match: UPI001CFA6EC3 (SUN domain-containing protein 2-like n=1 Tax=Protopterus annectens TaxID=7888 RepID=UPI001CFA6EC3)

HSP 1 Score: 48.5 bits (114), Expect = 2.110e-5
Identity = 19/32 (59.38%), Postives = 23/32 (71.88%), Query Frame = 1 
Query:    4 GRCWAFNGDHGRLTVKLARAIEPTHFTISHAP 99
            G CWAF GD G +T+KLA  I+PT FT+ H P
Sbjct:  127 GNCWAFAGDKGFVTIKLASRIKPTAFTLDHIP 158
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BLAST of mRNA_P-wetherbeei_contig7164.1.1 vs. uniprot
Match: A0A8J2SGF4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SGF4_9STRA)

HSP 1 Score: 47.8 bits (112), Expect = 4.480e-5
Identity = 17/30 (56.67%), Postives = 24/30 (80.00%), Query Frame = 1 
Query:    4 GRCWAFNGDHGRLTVKLARAIEPTHFTISH 93
            GRC+AF G  G+LTV+L+R + PTHF++ H
Sbjct:  326 GRCFAFRGAEGKLTVRLSRPVRPTHFSVEH 355
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BLAST of mRNA_P-wetherbeei_contig7164.1.1 vs. uniprot
Match: E4XQH1_OIKDI (SUN domain-containing protein n=2 Tax=Oikopleura dioica TaxID=34765 RepID=E4XQH1_OIKDI)

HSP 1 Score: 47.8 bits (112), Expect = 4.480e-5
Identity = 21/32 (65.62%), Postives = 23/32 (71.88%), Query Frame = 1 
Query:    4 GRCWAFNGDHGRLTVKLARAIEPTHFTISHAP 99
            G C+AF G  G LTVKLAR I PT+FTI H P
Sbjct:  284 GNCFAFAGQSGSLTVKLARPIYPTNFTIEHIP 315
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BLAST of mRNA_P-wetherbeei_contig7164.1.1 vs. uniprot
Match: A0A1R1PMJ8_ZANCU (SUN domain-containing protein 3 n=1 Tax=Zancudomyces culisetae TaxID=1213189 RepID=A0A1R1PMJ8_ZANCU)

HSP 1 Score: 47.4 bits (111), Expect = 6.130e-5
Identity = 15/31 (48.39%), Postives = 25/31 (80.65%), Query Frame = 1 
Query:    1 LGRCWAFNGDHGRLTVKLARAIEPTHFTISH 93
            LG CWA  G +G +T++LAR+++P+HF++ H
Sbjct:  300 LGECWAMQGSNGHVTIRLARSVKPSHFSLFH 330
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BLAST of mRNA_P-wetherbeei_contig7164.1.1 vs. uniprot
Match: A0A1S3ES77_DIPOR (SUN domain-containing protein 5 n=3 Tax=Heteromyidae TaxID=10015 RepID=A0A1S3ES77_DIPOR)

HSP 1 Score: 47.0 bits (110), Expect = 8.390e-5
Identity = 16/32 (50.00%), Postives = 24/32 (75.00%), Query Frame = 1 
Query:    4 GRCWAFNGDHGRLTVKLARAIEPTHFTISHAP 99
            G CWAF GDHG++T++LA+ +  T+ T+ H P
Sbjct:  250 GNCWAFAGDHGKVTIRLAQKVYLTNITLQHIP 281
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7164.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A1Y1YAC7_9FUNG1.410e-551.28SUN domain-containing protein n=1 Tax=Basidiobolus... [more]
A0A2P6NZK6_9EUKA1.740e-556.25SUN domain-containing protein 2-like n=1 Tax=Plano... [more]
A0A2K5D7Y7_AOTNA1.750e-553.13Sad1 and UNC84 domain containing 5 n=2 Tax=Aotus n... [more]
UPI001CFA6EC32.110e-559.38SUN domain-containing protein 2-like n=1 Tax=Proto... [more]
A0A8J2SGF4_9STRA4.480e-556.67Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
E4XQH1_OIKDI4.480e-565.63SUN domain-containing protein n=2 Tax=Oikopleura d... [more]
A0A1R1PMJ8_ZANCU6.130e-548.39SUN domain-containing protein 3 n=1 Tax=Zancudomyc... [more]
A0A1S3ES77_DIPOR8.390e-550.00SUN domain-containing protein 5 n=3 Tax=Heteromyid... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7164contigP-wetherbeei_contig7164:2940..3062 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog337075.U4KYP3
PFAMsSad1_UNC
Model size123
Max annot lvl4751|Fungi
KEGG koko:K19347
Hectar predicted targeting categoryno signal peptide or anchor
Exons1
Evalue1.12e-06
EggNOG OGsKOG2687@1|root,KOG2687@2759|Eukaryota,3A8G9@33154|Opisthokonta,3P56A@4751|Fungi,3RM45@4890|Ascomycota
DescriptionSad1 / UNC-like C-terminal
Cds size123
COG categoryD
BRITEko00000,ko03036
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186962.8510966-CDS-P-wetherbeei_contig7164:2939..30621683186962.8510966-CDS-P-wetherbeei_contig7164:2939..3062Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig7164 2940..3062 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7164.1.1prot_P-wetherbeei_contig7164.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig7164 2940..3062 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig7164.1.1

>prot_P-wetherbeei_contig7164.1.1 ID=prot_P-wetherbeei_contig7164.1.1|Name=mRNA_P-wetherbeei_contig7164.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=41bp
LGRCWAFNGDHGRLTVKLARAIEPTHFTISHAPPYAGADR*
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mRNA from alignment at P-wetherbeei_contig7164:2940..3062-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig7164.1.1 ID=mRNA_P-wetherbeei_contig7164.1.1|Name=mRNA_P-wetherbeei_contig7164.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=123bp|location=Sequence derived from alignment at P-wetherbeei_contig7164:2940..3062- (Phaeothamnion wetherbeei SAG_119_79)
CTGGGGCGGTGCTGGGCCTTCAACGGGGACCACGGCCGGCTGACGGTGAA
GCTGGCACGGGCTATCGAACCCACACACTTCACCATCTCGCACGCGCCTC
CATATGCCGGCGCAGATAGGTAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig7164:2940..3062-

>mRNA_P-wetherbeei_contig7164.1.1 ID=mRNA_P-wetherbeei_contig7164.1.1|Name=mRNA_P-wetherbeei_contig7164.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=123bp|location=Sequence derived from alignment at P-wetherbeei_contig7164:2940..3062- (Phaeothamnion wetherbeei SAG_119_79)
CTGGGGCGGTGCTGGGCCTTCAACGGGGACCACGGCCGGCTGACGGTGAA
GCTGGCACGGGCTATCGAACCCACACACTTCACCATCTCGCACGCGCCTC
CATATGCCGGCGCAGATAGGTAA
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