mRNA_P-wetherbeei_contig7124.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig7124.1.1 vs. uniprot
Match: A0A835YI51_9STRA (Histone deacetylase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YI51_9STRA) HSP 1 Score: 135 bits (341), Expect = 3.220e-31 Identity = 64/89 (71.91%), Postives = 75/89 (84.27%), Query Frame = 1
Query: 4 GRAAFREAVS-RLLPSLRAFNPSLILLSAGFDAADGDVGNARHGQHLRVGSDLTAEDYAWTTEKIQHVADMCCGGRMVSVLEGGYGRAP 267
GRAAFREA++ RLLP+LRAFNP LIL+S+GFDA +GDVGNA+H +H G DLT DYAW TE++Q VADMCC GR+VSVLEGGYGR P
Sbjct: 189 GRAAFREAITARLLPALRAFNPQLILMSSGFDAVEGDVGNAKHARHSHAGCDLTPSDYAWITERVQEVADMCCEGRLVSVLEGGYGRPP 277
BLAST of mRNA_P-wetherbeei_contig7124.1.1 vs. uniprot
Match: A0A7S1GN08_CYCTE (Hypothetical protein n=2 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GN08_CYCTE) HSP 1 Score: 124 bits (311), Expect = 2.480e-28 Identity = 64/91 (70.33%), Postives = 73/91 (80.22%), Query Frame = 1
Query: 4 GRAAFREAV-SRLLPSLRAFNPSLILLSAGFDAADGDVGNARH--GQHLRVGSDLTAEDYAWTTEKIQHVADMCCGGRMVSVLEGGYGRAP 267
GR A+R A+ +RLLP+LRAFNP LIL+SAGFDAA GDVGNARH G R+G DL EDYAWTT KI +AD+CC GR+VSVLEGGYGR P
Sbjct: 127 GRQAYRRAIQNRLLPALRAFNPDLILISAGFDAARGDVGNARHYAGGKERMGLDLEPEDYAWTTRKILEIADICCQGRVVSVLEGGYGRTP 217
BLAST of mRNA_P-wetherbeei_contig7124.1.1 vs. uniprot
Match: A0A836C9L4_9STRA (Hist_deacetyl domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9L4_9STRA) HSP 1 Score: 126 bits (316), Expect = 5.030e-27 Identity = 61/87 (70.11%), Postives = 73/87 (83.91%), Query Frame = 1
Query: 4 GRAAFREAV-SRLLPSLRAFNPSLILLSAGFDAADGDVGNARHGQHLRVGSDLTAEDYAWTTEKIQHVADMCCGGRMVSVLEGGYGR 261
GR ++REA+ +RLLP+LRAFNP LIL+S+GFDA +GDVGNARH + G+DLT DYAW TE+IQ VADMCC GR+VSVLEGGYGR
Sbjct: 375 GRGSWREAIMARLLPTLRAFNPQLILMSSGFDAVEGDVGNARHARGKCAGTDLTPADYAWITERIQEVADMCCDGRLVSVLEGGYGR 461
BLAST of mRNA_P-wetherbeei_contig7124.1.1 vs. uniprot
Match: A0A1E7FK49_9STRA (Hist_deacetyl domain-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FK49_9STRA) HSP 1 Score: 117 bits (293), Expect = 3.430e-26 Identity = 59/89 (66.29%), Postives = 71/89 (79.78%), Query Frame = 1
Query: 1 GGRAAFREAV-SRLLPSLRAFNPSLILLSAGFDAADGDVGNARH--GQHLRVGSDLTAEDYAWTTEKIQHVADMCCGGRMVSVLEGGYG 258
GGR A+R ++ +RLLP+LRAFNP LIL+SAGFDA GDVGNA+H G ++G DL EDYAWTT KI +AD+CC GR+VSVLEGGYG
Sbjct: 139 GGRMAYRNSIQNRLLPALRAFNPDLILISAGFDACKGDVGNAKHEMGGKEKMGIDLEPEDYAWTTRKILEIADICCQGRVVSVLEGGYG 227
BLAST of mRNA_P-wetherbeei_contig7124.1.1 vs. uniprot
Match: A0A1Z5JSY0_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JSY0_FISSO) HSP 1 Score: 124 bits (312), Expect = 8.280e-26 Identity = 64/90 (71.11%), Postives = 73/90 (81.11%), Query Frame = 1
Query: 4 GRAAFREAV-SRLLPSLRAFNPSLILLSAGFDAADGDVGNARHGQH-LRVGSDLTAEDYAWTTEKIQHVADMCCGGRMVSVLEGGYGRAP 267
GR A+REA+ +RLLPSLRAFNP LI++SAGFDA GDVGNARH + ++G DL EDYAWTT KI VADMCC GR+VSVLEGGYGR P
Sbjct: 1035 GRTAYREAILTRLLPSLRAFNPDLIIISAGFDACKGDVGNARHERGGEKMGLDLEPEDYAWTTRKILEVADMCCHGRVVSVLEGGYGRTP 1124
BLAST of mRNA_P-wetherbeei_contig7124.1.1 vs. uniprot
Match: A0A7S4K701_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K701_9STRA) HSP 1 Score: 121 bits (304), Expect = 8.630e-26 Identity = 63/91 (69.23%), Postives = 72/91 (79.12%), Query Frame = 1
Query: 4 GRAAFREAVS-RLLPSLRAFNPSLILLSAGFDAADGDVGNARH--GQHLRVGSDLTAEDYAWTTEKIQHVADMCCGGRMVSVLEGGYGRAP 267
GR ++R AV RLLP+LRAFNP LILLS GFDA+ GDVGNARH G R+G DL EDYAWTT+KI +AD+CC GR+VSVLEGGYGR P
Sbjct: 322 GRHSYRRAVQQRLLPALRAFNPDLILLSTGFDASRGDVGNARHYAGGRERMGLDLEPEDYAWTTQKIIEIADICCQGRVVSVLEGGYGRTP 412
BLAST of mRNA_P-wetherbeei_contig7124.1.1 vs. uniprot
Match: A0A6S8HTR1_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A6S8HTR1_9STRA) HSP 1 Score: 124 bits (311), Expect = 1.080e-25 Identity = 63/90 (70.00%), Postives = 75/90 (83.33%), Query Frame = 1
Query: 4 GRAAFREAV-SRLLPSLRAFNPSLILLSAGFDAADGDVGNARH--GQHLRVGSDLTAEDYAWTTEKIQHVADMCCGGRMVSVLEGGYGRA 264
GR A+R+A+ +RLLP+LRAFNP LIL+SAGFDAA GDVGNARH G R+G DL +EDYAWTT KI +AD+CC GR+VSVLEGGYGR+
Sbjct: 1004 GRVAYRQAIQNRLLPALRAFNPDLILISAGFDAARGDVGNARHERGGRERMGLDLESEDYAWTTRKILEIADICCHGRVVSVLEGGYGRS 1093
BLAST of mRNA_P-wetherbeei_contig7124.1.1 vs. uniprot
Match: B7FXN5_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FXN5_PHATC) HSP 1 Score: 124 bits (311), Expect = 1.090e-25 Identity = 64/92 (69.57%), Postives = 74/92 (80.43%), Query Frame = 1
Query: 4 GRAAFREAV-SRLLPSLRAFNPSLILLSAGFDAADGDVGNARHGQH-LRVGSDLTAEDYAWTTEKIQHVADMCCGGRMVSVLEGGYGRAPGA 273
GR A+R A+ +RLLP+LRAFNP LIL+SAGFDAA GDVGNARH + +VG DL EDYAWTT KI +AD+CC GR+VSVLEGGYGR P A
Sbjct: 1032 GRTAYRNAIQNRLLPALRAFNPDLILISAGFDAAKGDVGNARHERGGEKVGLDLEPEDYAWTTRKILEIADICCQGRVVSVLEGGYGRTPAA 1123
BLAST of mRNA_P-wetherbeei_contig7124.1.1 vs. uniprot
Match: A0A7R9ZPI6_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZPI6_9STRA) HSP 1 Score: 118 bits (295), Expect = 1.270e-25 Identity = 61/90 (67.78%), Postives = 71/90 (78.89%), Query Frame = 1
Query: 4 GRAAFREAV-SRLLPSLRAFNPSLILLSAGFDAADGDVGNARHGQHL-RVGSDLTAEDYAWTTEKIQHVADMCCGGRMVSVLEGGYGRAP 267
GR A+R A+ SRLLP+LRAFNP LIL+SAGFDA+ DVGNA+H + R G DL EDYAWTT KI +AD+CC GR+VSVLEGGYGR P
Sbjct: 179 GRVAYRNAIQSRLLPALRAFNPDLILISAGFDASRDDVGNAKHEVNRERRGMDLEPEDYAWTTRKILEIADICCQGRVVSVLEGGYGRTP 268
BLAST of mRNA_P-wetherbeei_contig7124.1.1 vs. uniprot
Match: A0A7S2R2A7_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R2A7_9STRA) HSP 1 Score: 118 bits (296), Expect = 2.670e-25 Identity = 60/91 (65.93%), Postives = 70/91 (76.92%), Query Frame = 1
Query: 4 GRAAFREAVS-RLLPSLRAFNPSLILLSAGFDAADGDVGNARH--GQHLRVGSDLTAEDYAWTTEKIQHVADMCCGGRMVSVLEGGYGRAP 267
GR A+R A++ RLLP+LRAFNP LIL+S G DAA DVGNARH G R+G DL EDYAWTT K+ VAD+CC GR++SVLEGGYGR P
Sbjct: 226 GRQAYRRAITQRLLPALRAFNPDLILISLGLDAARSDVGNARHYTGGRERMGIDLEPEDYAWTTRKVMEVADICCQGRIISVLEGGYGRTP 316 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7124.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig7124.1.1 >prot_P-wetherbeei_contig7124.1.1 ID=prot_P-wetherbeei_contig7124.1.1|Name=mRNA_P-wetherbeei_contig7124.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=485bp MCCGGRMVSVLEGGYGRAPGAAAVAAANAASLVAAATQAAASEDSGGGGSback to top mRNA from alignment at P-wetherbeei_contig7124:1209..3188- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig7124.1.1 ID=mRNA_P-wetherbeei_contig7124.1.1|Name=mRNA_P-wetherbeei_contig7124.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1980bp|location=Sequence derived from alignment at P-wetherbeei_contig7124:1209..3188- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig7124:1209..3188- >mRNA_P-wetherbeei_contig7124.1.1 ID=mRNA_P-wetherbeei_contig7124.1.1|Name=mRNA_P-wetherbeei_contig7124.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1455bp|location=Sequence derived from alignment at P-wetherbeei_contig7124:1209..3188- (Phaeothamnion wetherbeei SAG_119_79)back to top |