mRNA_P-wetherbeei_contig706.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig706.1.1 vs. uniprot
Match: A0A835Z1S2_9STRA (1,3-beta-glucan synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1S2_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 1.230e-14 Identity = 57/135 (42.22%), Postives = 71/135 (52.59%), Query Frame = 1
Query: 4 PGAIQTWLLFHNALSQGVVVEDILKYARKTQEQVVDEEE---DLTELKARVKHQELLLMQLM-----NSGGGPLTPMG-----ASSSXXXSYDXXXXXXXXXXXXXXXPGAGLPALSGAPMMKPSQSTVDFTKMA 369
P +QTWLLFHNALSQGVV+EDILKYARK QE E+ D ELK +KHQE +L QLM + GG P G AS + S +++ A MM+ S+ST+D +KMA
Sbjct: 2150 PKDVQTWLLFHNALSQGVVIEDILKYARKNQEATAGNEDKLDDTAELKKLIKHQEYMLQQLMARAAAHGGGTNGVPNGRENGAASRTSSLSGGDGRPGVLTMPLADDDGADSDTSVAPASMMRASRSTLDLSKMA 2284
BLAST of mRNA_P-wetherbeei_contig706.1.1 vs. uniprot
Match: A0A7S2UV62_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UV62_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 3.150e-12 Identity = 37/62 (59.68%), Postives = 50/62 (80.65%), Query Frame = 1
Query: 1 IPGAIQTWLLFHNALSQGVVVEDILKYARKTQEQVVDEEEDLTELKARVKHQELLLMQLMNS 186
+P +QTWLLFHNALSQGVVV+DILKYAR+++E+ V EE DLTE++ ++HQE ++ M S
Sbjct: 1527 LPAKVQTWLLFHNALSQGVVVDDILKYARRSKEEGV-EEMDLTEMRKVIQHQEHVIQTFMQS 1587
BLAST of mRNA_P-wetherbeei_contig706.1.1 vs. uniprot
Match: A0A6H5JFR3_9PHAE (1,3-beta-glucan synthase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFR3_9PHAE) HSP 1 Score: 68.2 bits (165), Expect = 1.770e-10 Identity = 61/177 (34.46%), Postives = 79/177 (44.63%), Query Frame = 1
Query: 4 PGAIQTWLLFHNALSQGVVVEDILKYARKTQEQV-VDEE--EDLTELKARVKHQ----ELLLMQLMNSGGGPLTPMGAS----------------------SSXXXSYDXXXXXXXXXXXXXXXPGAGLPALSGAPMMKPSQSTVDFTKMAQSGQRQNSPGPGT---FSSPAQFPPR 438
P +QTWLLFHNALS+GVV++DILKYAR +E VDE+ E +ELK V+ Q ELL ++M+ GGG + S + S D P A + A MM PS S+++ MA + P P FSSP PPR
Sbjct: 2043 PSLVQTWLLFHNALSEGVVIDDILKYARMNKELAGVDEDSLESSSELKKIVEAQAAELELLKQRIMSGGGGAFIGINGSPHQXXXXXXXXXXVGAGNEECMAGSVYSTDSGGYSYMMQPLGGDGPDA---VPNRAEMMHPSNSSLNLADMANARASTTEPPPSQAFQFSSPVSMPPR 2216
BLAST of mRNA_P-wetherbeei_contig706.1.1 vs. uniprot
Match: D7FR92_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR92_ECTSI) HSP 1 Score: 65.1 bits (157), Expect = 1.680e-9 Identity = 55/161 (34.16%), Postives = 72/161 (44.72%), Query Frame = 1
Query: 4 PGAIQTWLLFHNALSQGVVVEDILKYARKTQEQV-VDEE--EDLTELKARVKHQ----ELLLMQLMNSGGGPL-----TPM----------------GASSSXXXSYDXXXXXXXXXXXXXXXPGAGLPALSGAPMMKPSQSTVDFTKMAQSGQRQNSPGP 402
P +QTWLLFHNALS+GVV++DILKYAR +E VDE+ E +ELK V+ Q ELL ++M+ GGG +P+ G Y G + A MM+PS ST+D MA + P P
Sbjct: 232 PSLVQTWLLFHNALSEGVVIDDILKYARMNKELAGVDEDSLESSSELKKIVEAQAAELELLKQRIMSGGGGSFIGINGSPLQQXXXXXXXXXAGVGAGEEGMAGSVYSTGSGGYSYMMQPLGGDGPDAAPTNRAEMMRPSNSTLDLADMANAKASTTEPPP 392
BLAST of mRNA_P-wetherbeei_contig706.1.1 vs. uniprot
Match: A0A835Z4B5_9STRA (1,3-beta-glucan synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4B5_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 7.140e-9 Identity = 31/43 (72.09%), Postives = 36/43 (83.72%), Query Frame = 1
Query: 1 IPGAIQTWLLFHNALSQGVVVEDILKYARKTQEQVVDEEEDLT 129
+P +QTWLLFHNALSQGVV+EDILKYAR+TQEQ E+ D T
Sbjct: 1710 LPKNVQTWLLFHNALSQGVVIEDILKYARRTQEQSKSEDVDDT 1752
BLAST of mRNA_P-wetherbeei_contig706.1.1 vs. uniprot
Match: A0A482SV99_9ARCH (FKS1_dom1 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SV99_9ARCH) HSP 1 Score: 63.5 bits (153), Expect = 7.150e-9 Identity = 29/58 (50.00%), Postives = 46/58 (79.31%), Query Frame = 1
Query: 7 GAIQTWLLFHNALSQGVVVEDILKYARKTQEQVVDEEEDLTELKARVKHQELLLMQLM 180
G +QTWLL+ NALS+G+ +EDIL+YAR+T+E+ +E E +TELK +++ QE + +L+
Sbjct: 1854 GYVQTWLLYQNALSKGIEIEDILQYARRTKEKAHNENETVTELKTKIQSQEKKIQELI 1911
BLAST of mRNA_P-wetherbeei_contig706.1.1 vs. uniprot
Match: A0A7S2QVX6_9STRA (1,3-beta-glucan synthase (Fragment) n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2QVX6_9STRA) HSP 1 Score: 62.8 bits (151), Expect = 1.330e-8 Identity = 36/71 (50.70%), Postives = 47/71 (66.20%), Query Frame = 1
Query: 4 PGAIQTWLLFHNALSQGVVVEDILKYARKTQEQV-VDEEEDLTELKARVKHQELLLMQLMNSGGGPLTPMG 213
P IQTWLL+HNALS VVVEDILKY+R+TQE+ D E + +L+A + Q+LLL +L G + G
Sbjct: 1976 PQHIQTWLLYHNALSTDVVVEDILKYSRRTQEKEGEDVESQMEQLRAMIMKQDLLLQKLAGGNVGEVVGGG 2046
BLAST of mRNA_P-wetherbeei_contig706.1.1 vs. uniprot
Match: A0A7S1UZ62_9STRA (1,3-beta-glucan synthase n=2 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UZ62_9STRA) HSP 1 Score: 61.6 bits (148), Expect = 3.350e-8 Identity = 43/87 (49.43%), Postives = 56/87 (64.37%), Query Frame = 1
Query: 1 IPGAIQTWLLFHNALSQGVVVEDILKYARKTQEQ------VVDEE--EDLTELKARVKHQELLLMQ--LMNSGG--GPLTPMGASSS 225
+P IQTWLL+HNALS VVV DIL+YARKTQE DE+ E++ EL+ V+ QE LLM L++S G GP +P +S+
Sbjct: 1973 LPRHIQTWLLYHNALSSDVVVSDILRYARKTQESGGRDSGETDEDLKEEVAELRKIVQRQEHLLMSAGLVSSDGTQGPPSPAKPASA 2059
BLAST of mRNA_P-wetherbeei_contig706.1.1 vs. uniprot
Match: B7FQP6_PHATC (1,3-beta-glucan synthase n=4 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FQP6_PHATC) HSP 1 Score: 60.5 bits (145), Expect = 8.450e-8 Identity = 36/70 (51.43%), Postives = 45/70 (64.29%), Query Frame = 1
Query: 1 IPGAIQTWLLFHNALSQGVVVEDILKYARKTQE------QVVDEEEDLTELKARVKHQELLLMQLMNSGG 192
+PG IQTWLL+HNALS VVV DIL+YARKTQE + D E ++EL+ V+ QE L +GG
Sbjct: 1960 LPGMIQTWLLYHNALSTDVVVSDILRYARKTQESGAGGEKTEDLVEQISELRKVVQRQEQALASAGFTGG 2029
BLAST of mRNA_P-wetherbeei_contig706.1.1 vs. uniprot
Match: A0A448ZGS7_9STRA (1,3-beta-glucan synthase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZGS7_9STRA) HSP 1 Score: 58.5 bits (140), Expect = 3.940e-7 Identity = 38/81 (46.91%), Postives = 49/81 (60.49%), Query Frame = 1
Query: 1 IPGAIQTWLLFHNALSQGVVVEDILKYARKTQ---------EQVVDEEEDLTELKARVKHQELLL--MQLMNSGGGPLTPM 210
+P IQTWLL+HNALS VVV DILKYARK++ E+++D+ + ELK + QE LL M L+ S P PM
Sbjct: 1976 LPSMIQTWLLYHNALSTNVVVSDILKYARKSKDSGGTGGANEELIDQ---VNELKKVIHKQEKLLESMGLVQSDAAPSPPM 2053 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig706.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig706.1.1 >prot_P-wetherbeei_contig706.1.1 ID=prot_P-wetherbeei_contig706.1.1|Name=mRNA_P-wetherbeei_contig706.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=148bp IPGAIQTWLLFHNALSQGVVVEDILKYARKTQEQVVDEEEDLTELKARVKback to top mRNA from alignment at P-wetherbeei_contig706:2003..2446- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig706.1.1 ID=mRNA_P-wetherbeei_contig706.1.1|Name=mRNA_P-wetherbeei_contig706.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=444bp|location=Sequence derived from alignment at P-wetherbeei_contig706:2003..2446- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig706:2003..2446- >mRNA_P-wetherbeei_contig706.1.1 ID=mRNA_P-wetherbeei_contig706.1.1|Name=mRNA_P-wetherbeei_contig706.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=444bp|location=Sequence derived from alignment at P-wetherbeei_contig706:2003..2446- (Phaeothamnion wetherbeei SAG_119_79)back to top |