mRNA_P-wetherbeei_contig70.8.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig70.8.1 vs. uniprot
Match: A0A7S3U0P3_EMIHU (Hypothetical protein (Fragment) n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3U0P3_EMIHU) HSP 1 Score: 96.3 bits (238), Expect = 2.110e-19 Identity = 72/241 (29.88%), Postives = 108/241 (44.81%), Query Frame = 2
Query: 251 SNLRVLFMHGLENRGGKARYFKQHHKKGQHCIPDMGSSMFSLWQTNSILLNIITDLPFWTLMMPLILAVAAASYRLWPTASACLAALATAVLAKGPRWWFHAVVGSGIHNSLEGCMEVQRRAIDEFKP---DVVVASSWGGAVCAFLMFRGAWTGPTVLLAPAQGILMRHMGKERRHAWGYIVPGESPDLPPVASA-CIVAHSTADRIVPYADSVAFWDYTFAKHGLSRRARLHTVEGDSH 961
+++RVLF HGLE+ G + + PDM S+++ + NS++L +++ A+L + P W +G + +S E C++VQR A+ + P DV++ SSWGGAV A L+ GAWTGP V+L PA L RH E + + LP A C++ H AD +P ADSV T G+ L +EG +H
Sbjct: 23 ADMRVLFCHGLESGPGGFKPRALRSQGATVTAPDMAMSLWNPTKRNSVVLGLLSP---------------------------------RAMLTRWPSQW----IGGALADSFEACVDVQRTALRDAGPAAFDVLIGSSWGGAVAAALIAEGAWTGPAVMLCPALSELRRHGAIEA-------IVDQIAALPAERKAQCLIVHGDADETIPVADSVKLCAAT----GIE----LEVIEGGNH 211
BLAST of mRNA_P-wetherbeei_contig70.8.1 vs. uniprot
Match: UPI001CCA3739 (hypothetical protein n=1 Tax=Hyalangium sp. H56D21 TaxID=2861190 RepID=UPI001CCA3739) HSP 1 Score: 91.7 bits (226), Expect = 2.470e-17 Identity = 73/215 (33.95%), Postives = 105/215 (48.84%), Query Frame = 2
Query: 257 LRVLFMHGLEN--RGGKARYFKQHHKKGQHCI-PDMGSSMFSLWQTNSILLNIITDLPFWTLMMPLILAVAAASYRLWPTASACLAALATAVLAKGPRWWF---HAVVGSGIHNSLEGCMEVQRRAIDEFKPDVVVASSWGGAVCAFLMFRGAWTGPTVLLAPAQGILMRHMGKERRHAWGYIVPGESPDLPPVASACIVAHSTADRIVPYADSV 883
+RVLF+HGLE+ +G K R ++ +G + PDM ++ + NS+L ++ W + V S L S+ L AT +L G W A+V S C+EVQR A+ KP+++V SSWGGA+ A L+ RG W+GPTVLLAPA MG+ + S +P +V H +D VP+ DSV
Sbjct: 4 IRVLFIHGLESHPQGSKVRILRE---QGFDVVAPDMQMAVLQFKRRNSVLRQLLRLPETWLAGV-----VIGISSVLCIVGSSVLGLTATILL--GLIWGAVRGRALVAKAFARSFAACVEVQRAAVQREKPEIIVGSSWGGAIAAELIIRGEWSGPTVLLAPAILKASEWMGRLDSTDKMESIRARSTQVP-----IVVFHDPSDDTVPHQDSV 203
BLAST of mRNA_P-wetherbeei_contig70.8.1 vs. uniprot
Match: A0A5C6XBX0_9DELT (Uncharacterized protein n=5 Tax=Bradymonadales TaxID=1779134 RepID=A0A5C6XBX0_9DELT) HSP 1 Score: 86.7 bits (213), Expect = 1.070e-15 Identity = 75/213 (35.21%), Postives = 97/213 (45.54%), Query Frame = 2
Query: 260 RVLFMHGLENRGGKARYFKQHHKKGQHC-IPDMGSSMFSLWQTNSILLNIITDLPFWTLMMPLILAVAAASYR--LWPTASACLAALATAVLAKGPRWWF---HAVVGSGIHNSLEGCMEVQRRAIDEFKPDVVVASSWGGAVCAFLMFRGAWTGPTVLLAPAQGILMRHMGKERRHAWGYIVPGESPDLPPVASACIVAHSTADRIVPYADS 880
RV+F+HGLE+ G +Q G DM S+ L + +S++ NI+ V A R +WP A A + A WW V + S E C+EVQRRA++ FKPDV++ SSWGGA+ LM RG W GP VLLAPA R MG + E D AS ++ H D VP ADS
Sbjct: 6 RVMFVHGLES-GPSGEKVQQLRAMGVGVSAADMRMSLKRLDRHHSVMRNILRAPEVQVAAAGAAAMVGAGFLRKKMWPAALAGVGIGA---------WWTARGDEVTRQAVCTSYEQCVEVQRRALETFKPDVLLGSSWGGAITLELMLRGHWRGPAVLLAPAFHAAHRRMGLDAAARL------EGFDG---ASRTLIFHDPTDDTVPLADS 199
BLAST of mRNA_P-wetherbeei_contig70.8.1 vs. uniprot
Match: A0A328C2S5_9DELT (Uncharacterized protein n=2 Tax=Lujinxingia litoralis TaxID=2211119 RepID=A0A328C2S5_9DELT) HSP 1 Score: 85.9 bits (211), Expect = 1.530e-15 Identity = 79/258 (30.62%), Postives = 116/258 (44.96%), Query Frame = 2
Query: 266 LFMHGLENRGGKARYFKQHHKKGQHCIP-DMGSSMFSLWQTNSILLNIIT--DLPFWTLMMPLILAVAAASYRLWPTASACLAALATAVLAKGPRWWF---HAVVGSGIHNSLEGCMEVQRRAIDEFKPDVVVASSWGGAVCAFLMFRGAWTGPTVLLAPAQGILMRHMGKERRHAWGYIVPGESPDLPPVASACIVAHSTADRIVPYADSVAFWDYTFAKHGLSRRARLHTVEGDSHCMHSLNRAAGDGGLLDLIAE 1021
+F+HGLE+ G + +G + DM S+ L + NS+ N++ ++ ++ ++ + +WP A +A A WW A+ I S C+EVQR AI F+PDVV+ SSWGGA+ LM RG W GP VLLAPA + R MG + + PG + ++ H +D VP DS A + GL LH V+ H + L DG LL+ + E
Sbjct: 1 MFVHGLES-GPSGEKVQGLRAQGLEVVAADMQMSLKRLDRCNSVSRNLLRTPEVQAAGVVSAALVGLGLGRRSVWPVGLAGVALGA---------WWSGRGEALTRQAIMASYRRCVEVQREAIARFEPDVVLGSSWGGAITLELMLRGHWQGPAVLLAPAFHKVHRAMGLDPVGRLAGLEPGST----------LIFHDPSDDTVPLEDSQALSEQL----GLP----LHAVDAGGHRLMGL---VEDGRLLESLCE 227
BLAST of mRNA_P-wetherbeei_contig70.8.1 vs. uniprot
Match: A0A7S4KZB4_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4KZB4_9EUKA) HSP 1 Score: 83.2 bits (204), Expect = 2.700e-14 Identity = 63/222 (28.38%), Postives = 100/222 (45.05%), Query Frame = 2
Query: 260 RVLFMHGLENRGGKARYFKQHHKKGQHCIPDMGSSMFSLWQTNSILLNIITDLPFWTLMMPLILAVAAASYR-LWPTASACLAALATAVLAKGPRWW---FHAVVGSGIHNSLEGCMEVQRRAIDEFKPDVVVASSWGGAVCAFLMFRGAWTGPTVLLAPA---------QGILMRHMGKERRHAWGYI-VPGESPDLPPVASACIVAHSTADRIVPYADSV 883
+++F+HGLE + + + PDM S++ L ++NS+ +++ F + L + + + LWP+ AVL G W ++ +H S C+++Q A+ + PDV++ SSWGGAV L+ RG +TGPT+LLAPA QG L A + S D+P +V H D +PY SV
Sbjct: 20 KIMFIHGLEGHPNGRKVTMLRDQGFEVHAPDMQMSLYRLNKSNSVTRHLLRLPEFQVICAVLFAGICSIIWASLWPS---------VAVLLLGVAWLAIRIRSLFAEAMHVSFLACVDIQTLALPRYNPDVLIGSSWGGAVAQELIARGNYTGPTILLAPALQEVLNMTGQGCLSSPASSHEEEAESITRLKQRSGDMP-----ILVFHDRQDDTIPYQHSV 227
BLAST of mRNA_P-wetherbeei_contig70.8.1 vs. uniprot
Match: A0A7R9UUW1_DIALT (Hypothetical protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9UUW1_DIALT) HSP 1 Score: 81.3 bits (199), Expect = 8.210e-14 Identity = 59/167 (35.33%), Postives = 77/167 (46.11%), Query Frame = 2
Query: 242 VDPSNLRVLFMHGLEN--RGGKARYFKQHHKKGQHCIPDMGSSMFSLWQTNSILLNIITDLPFWTLMMPLILAVAAASYRLWPTASACLAALATAVLAKGPRWWFHAVVGSGIHNSLEGCMEVQRRAIDEFKPDVVVASSWGGAVCAFLMFRGAWTGPTVLLAPAQG 736
V+ RVL+MHGLE+ RG K R+ ++ PDM +SM+ L NS A L LAT++ P + + ++LE C++VQ AI FKPDVVVASSWG AV + RG W GPTVL+ PA G
Sbjct: 12 VEKGPRRVLYMHGLESGPRGIKVRWLSARYEAV--LAPDMQTSMWDLAAPNSF-------------------------------ARCALRTLATSLPWNAPAY--------ALVDNLERCLQVQAEAIRAFKPDVVVASSWGAAVAQLALARGVWRGPTVLMCPALG 137
BLAST of mRNA_P-wetherbeei_contig70.8.1 vs. uniprot
Match: A0A7V1GU28_9BACT (Uncharacterized protein n=2 Tax=Bacteria TaxID=2 RepID=A0A7V1GU28_9BACT) HSP 1 Score: 79.0 bits (193), Expect = 1.200e-13 Identity = 54/143 (37.76%), Postives = 73/143 (51.05%), Query Frame = 2
Query: 593 CMEVQRRAIDEFKPDVVVASSWGGAVCAFLMFRGAWTGPTVLLAPAQGILMRHMGKERRHAWGYIVPGESPDLPPVASACIVAHSTADRIVPYADSVAFWDYTFAKHGLSRRARLHTVEGDSHCMHSLNRAAGDGGLLDLIAE 1021
C+E+Q R I EF+PD+++ SS+GGAV L+ RG+W GPT+LLAPA + Y VP E LPP IV H T D IV ADS A A+ G RL V+ D H+L+ L+ ++ +
Sbjct: 43 CVELQARTIREFRPDILIGSSFGGAVAVALLHRGSWRGPTLLLAPA--------------VFHYPVPRE---LPPGVPVWIV-HGTQDTIVDVADSRAL-----ARTGTPELVRLIEVDDD----HALSNTVATSQLVSIVRQ 158
BLAST of mRNA_P-wetherbeei_contig70.8.1 vs. uniprot
Match: A0A4P5W2D7_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A4P5W2D7_9DELT) HSP 1 Score: 77.0 bits (188), Expect = 4.640e-13 Identity = 54/147 (36.73%), Postives = 74/147 (50.34%), Query Frame = 2
Query: 578 NSLEGCMEVQRRAIDEFKPDVVVASSWGGAVCAFLMFRGAWTGPTVLLAPAQGILMRHMGKERRHAWGYIVPGESPDLPPVASACIVAHSTADRIVPYADSVAFWDYTFAKHGLSRRARLHTVEGDSHCMHSLNRAAGDGGLLDLIA 1018
+S++ + V RRA+ E PDVVVASS+GGAV L+ G WTGPTVL+APA R +G++ D P + +V H +AD ++P DS F G RA L V G +H LN DG L +++
Sbjct: 36 SSVKAALAVARRAVAEVPPDVVVASSFGGAVAVALLAEGVWTGPTVLIAPAT----RRLGRD--------------DRLPANARVVVLHGSADEVIPLNDS------RFLVEG--SRADLRIVAGGNH---RLNIILKDGTLAGVLS 153
BLAST of mRNA_P-wetherbeei_contig70.8.1 vs. uniprot
Match: A0A250JAX1_9DELT (Uncharacterized protein n=2 Tax=Cystobacter fuscus TaxID=43 RepID=A0A250JAX1_9DELT) HSP 1 Score: 75.1 bits (183), Expect = 6.690e-12 Identity = 44/110 (40.00%), Postives = 57/110 (51.82%), Query Frame = 2
Query: 554 AVVGSGIHNSLEGCMEVQRRAIDEFKPDVVVASSWGGAVCAFLMFRGAWTGPTVLLAPAQGILMRHMGKERRHAWGYIVPGESPDLPPVASACIVAHSTADRIVPYADSV 883
A+V S C+EVQR A+ KPDVVV SSWGGA+ A L+ G W+GPT+LLAPA MG+ + S +P +V H +D VP+ SV
Sbjct: 69 ALVAKAFTRSFAACVEVQRAAVRHEKPDVVVGSSWGGAIAAELIILGEWSGPTLLLAPAVLKACEWMGQTDSADKMARIRARSMQMP-----IVVFHDPSDETVPHQHSV 173
BLAST of mRNA_P-wetherbeei_contig70.8.1 vs. uniprot
Match: A0A2H5ZKZ0_9BACT (Uncharacterized protein n=1 Tax=bacterium HR30 TaxID=2035425 RepID=A0A2H5ZKZ0_9BACT) HSP 1 Score: 73.2 bits (178), Expect = 1.890e-11 Identity = 51/153 (33.33%), Postives = 72/153 (47.06%), Query Frame = 2
Query: 578 NSLEGCMEVQRRAIDEFKPDVVVASSWGGAVCAFLMFRGAWTGPTVLLAPAQGILMRHMGKERRHAWGYIVPGESPDLPPVASACIVAHSTADRIVPYADSVAFWDYTFAKHGLSRRARLHTVEGDSHCMHSLNRAAGDGGLLDLIAEAFVLH 1036
+ +GC+E+ R + EF+PDV+V SS+GGAV L+ R AW GPT+LLAPA + Y VP P+ PV + H D +V DS A A+ G RL V+ D H+L+ L+D++ H
Sbjct: 59 SDFQGCVELHARKLSEFQPDVLVGSSFGGAVAVALLHRKAWAGPTLLLAPA--------------VFHYDVPRFLPEGVPVW----IVHGLRDTVVRIEDSRAL-----AQTGTPALVRLIEVDDD----HALSATVARSELVDIVRRLAAQH 184 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig70.8.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig70.8.1 >prot_P-wetherbeei_contig70.8.1 ID=prot_P-wetherbeei_contig70.8.1|Name=mRNA_P-wetherbeei_contig70.8.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=331bp MAQGVDPSNLRVLFMHGLENRGGKARYFKQHHKKGQHCIPDMGSSMFSLWback to top mRNA from alignment at P-wetherbeei_contig70:12758..14064+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig70.8.1 ID=mRNA_P-wetherbeei_contig70.8.1|Name=mRNA_P-wetherbeei_contig70.8.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1307bp|location=Sequence derived from alignment at P-wetherbeei_contig70:12758..14064+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig70:12758..14064+ >mRNA_P-wetherbeei_contig70.8.1 ID=mRNA_P-wetherbeei_contig70.8.1|Name=mRNA_P-wetherbeei_contig70.8.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=993bp|location=Sequence derived from alignment at P-wetherbeei_contig70:12758..14064+ (Phaeothamnion wetherbeei SAG_119_79)back to top |