mRNA_P-wetherbeei_contig6922.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6922.1.1
Unique NamemRNA_P-wetherbeei_contig6922.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6922.1.1 vs. uniprot
Match: A0A3C1FPA6_9PROT (Fe-S cluster assembly protein SufD n=6 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C1FPA6_9PROT)

HSP 1 Score: 302 bits (774), Expect = 2.860e-95
Identity = 192/409 (46.94%), Postives = 237/409 (57.95%), Query Frame = 1
Query:   97 RQNAIRRFSKTGLPTRKDEAWRWTDLSLLREQSRTVAAH----PVDLKSMDGPFAGLDAWRMIFVNGVLQGEASD---LPPGLCAQSLRAALQDDAAIADRLRDSADAPFLALNTALLNDGAYICVAADTRVSKPLHLVFFNTGNA---QIRNLVVLEPHANVTLLESHYGPAGAEYFVNNASDVQLGEGARLAHYRDQAESQNALHFHFLNARLDSHTVYDGFTLTRGARLSRNEVHVEIAGSDALCSLNGVSMLNGSQIADTTCVMNHRAPGSRSHQMFRTILDGKSQGIFQGLIRVAKPAQRTDATQQIKAMLLSPHAVQNSKPELEILADDVKCAHGASVGQLDEAALFYLRARGIAEAQARALLTGAF----LDDAVAQIQGSDALDAGQVQLNMRDTISTWLA 1281
            R  A+  F++TGLP R+ E WRWTDL+ LRE   T  A      V    + GPFA    +R++FVNG  + + SD   LP G+   SL A + +      R    AD  F  LN A   DGA I V A   +S+P+HL F N  +    Q +  V L   A   LLE+H G AG   F N  + V L EGARL HYR Q E+ ++ HF  L A L     Y+ FTLT GARLSRN   +   G  A C  +G  +L+G+Q ADT   + H AP   S Q FR  LD +++G FQG I V KPAQRTDA Q IKA+LLSP A Q++KPELEI ADDVKCAHGAS G LD  ALFYLRARG+ +AQARALL GAF    LDD  A     D  +AGQ++ ++   +  WLA
Sbjct:   30 RAAALAAFAETGLPDRRREGWRWTDLNPLREGGFTTPAPRFTGTVASDLLSGPFAISRGFRLVFVNGYFRQDLSDIASLPDGVTLGSL-AEVGEQCVSFGRDIGGADTGFSLLNQAGATDGALIRVGAGVTLSQPVHLHFVNMDSGCHMQTQIKVELGAGARACLLETHRGAAGTACFTNQLATVTLAEGARLDHYRLQEEAADSFHFRDLRAALARQAGYESFTLTTGARLSRNSGFIRFDGEGARCGYHGAYLLSGTQQADTVTQLQHVAPDCTSAQNFRGALDDRARGTFQGCITVEKPAQRTDARQSIKALLLSPRAEQDAKPELEIFADDVKCAHGASTGNLDPDALFYLRARGVPQAQARALLIGAFVSEVLDDLAAATLPPD--EAGQLKDSLHARMQAWLA 435          
BLAST of mRNA_P-wetherbeei_contig6922.1.1 vs. uniprot
Match: A0A545TPA0_9PROT (Fe-S cluster assembly protein SufD n=1 Tax=Denitrobaculum tricleocarpae TaxID=2591009 RepID=A0A545TPA0_9PROT)

HSP 1 Score: 281 bits (719), Expect = 4.380e-87
Identity = 169/416 (40.62%), Postives = 250/416 (60.10%), Query Frame = 1
Query:   79 PRLRAVRQNAIRRFSKTGLPTRKDEAWRWTDLSLLREQSRTVAA---HPVDLKSMDGPFAGLDAWRMIFVNGVLQGEASDL---PPGLCAQSLRAALQDDAAIADRL----RDSADAPFLALNTALLNDGAYICVAADTRVSKPLHLVFFNTGNAQI-----RNLVVLEPHANVTLLESHYGPAGAEYFVNNASDVQLGEGARLAHYRDQAESQNALHFHFLNARLDSHTVYDGFTLTRGARLSRNEVHVEIAGSDALCSLNGVSMLNGSQIADTTCVMNHRAPGSRSHQMFRTILDGKSQGIFQGLIRVAKPAQRTDATQQIKAMLLSPHAVQNSKPELEILADDVKCAHGASVGQLDEAALFYLRARGIAEAQARALLTGAFLDDAVAQIQGSDALDAGQVQLNMRDTISTWLA 1281
            P L A+R  A+  F++TGLPT++ E+W++T+L  L++   T  A    P+ +           A+R++FVNG  + + SDL   P G+   S+    +      + L    +D+ D P +ALNTA + DG  + + A +++ K L ++  N+    +     RNL+ L   +  T+LE H G  GA Y++N A+DV L EGA L HYR QAE +NA+H   +N +L   + YDGFTL+ GA LSRNE  +++  + A C LNG  ++   Q  DTT V++H +P +   ++F+ +LD +S+G+FQG I V   AQ+TD  Q  K +LL+  A  N+KPELEI ADDVKC+HG S G++D  ALFYLR+RG++E  A+ALL  AFL ++V++I G +AL    V L   D IS WLA
Sbjct:   28 PWLAALRDRALDSFAETGLPTQRRESWKYTNLRGLKQLELTEQALSPQPISIDRAPSLLPDGSAYRVVFVNGGFRSDLSDLAGLPEGVTLGSVAELAESQPQRVEALLSAHKDTDDQPLVALNTAFMRDGLLLELEAGSKLDKTLEIIHVNSAENGVFAHNARNLISLAAGSEATILEHHIGLNGAAYYINAANDVTLAEGATLRHYRIQAEGENAVHTSTMNGQLAGDSFYDGFTLSIGAALSRNETSMKLTAAGARCHLNGGYLMRDKQHCDTTTVVDHLSPQTSCREVFKGVLDDRSRGVFQGRIVVHPQAQQTDGHQLNKVLLLTDTAEINAKPELEIYADDVKCSHGCSAGEVDHDALFYLRSRGLSEDSAKALLIKAFLAESVSEI-GDEALH--DVFL---DKISDWLA 437          
BLAST of mRNA_P-wetherbeei_contig6922.1.1 vs. uniprot
Match: A0A5B2V944_9HYPH (Fe-S cluster assembly protein SufD n=1 Tax=Salinarimonas soli TaxID=1638099 RepID=A0A5B2V944_9HYPH)

HSP 1 Score: 280 bits (716), Expect = 1.200e-86
Identity = 168/414 (40.58%), Postives = 243/414 (58.70%), Query Frame = 1
Query:    1 MAEIATLEHALLSEVKAQEAGMASVSPRLRAVRQNAIRRFSKTGLPTRKDEAWRWTDLSLLREQSRTVAAHPVDL-----KSMDGPFAGLDAWRMIFVNGVLQGEASDLPPGLCAQSLRAALQDDAAIADRLR---DSADAPFLALNTALLNDGAYICVAADTRVSKPLHLVFFNTGNAQI----RNLVVLEPHANVTLLESHYGPAGAEYFVNNASDVQLGEGARLAHYRDQAESQNALHFHFLNARLDSHTVYDGFTLTRGARLSRNEVHVEIAGSDALCSLNGVSMLNGSQIADTTCVMNHRAPGSRSHQMFRTILDGKSQGIFQGLIRVAKPAQRTDATQQIKAMLLSPHAVQNSKPELEILADDVKCAHGASVGQLDEAALFYLRARGIAEAQARALLTGAFLDDAVAQ 1206
            MA+IA ++ A  + +    A   S+ P   A R++A RRFS+ GLP R+ E W++TDL  L   +   A  P +      +++DGP   +D+   + VNG L    + LPPG+    LR AL     +  R+     + D    ALN A ++DGA I +AA T V +P+HL F NTG        R LV +E  A+VTLLE+H GP G  Y  N   ++ + + A++AH R  AE  +AL    L ARL +   +D F L  G ++SR++V++  AG  +   + G +M+NG+Q ADTT V++H APG  S ++F+T++DG++ G+FQG I V   AQ+TD      A+LLS     N+KPELEI ADDV+CAHGA+ GQLDE  LFYLR+RG+   +A ALL  +FL + + +
Sbjct:    1 MADIAMIKTAAETGLANLFAITKSLLPGDAAHREDAFRRFSERGLPHRRIEEWKYTDLRALLRDAAPFAGKPTEADIAAAEALDGPLTAIDSIEAVIVNGHLVRAPAALPPGVEIVPLREALGSGHPLLARMGAVGHAHDNAAYALNAAFMSDGAVIRIAAGTHVERPIHLRFLNTGATPFATATRVLVHVEVGASVTLLETHAGPGGVGYQPNGVVEMVVDDHAKVAHMRLNAEGSDALALSTLTARLGAKVAFDSFNLVAGTQVSRHQVYLAFAGEGSNAGIRGATMINGTQHADTTLVIDHAAPGCTSRELFKTVVDGQATGVFQGKIIVHSRAQKTDGRMMSAAVLLSEEGTMNNKPELEIFADDVQCAHGATCGQLDEDLLFYLRSRGLPLKEAEALLLESFLAEPIGE 414          
BLAST of mRNA_P-wetherbeei_contig6922.1.1 vs. uniprot
Match: UPI0019F01CC0 (Fe-S cluster assembly protein SufD n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=UPI0019F01CC0)

HSP 1 Score: 276 bits (705), Expect = 6.450e-85
Identity = 167/399 (41.85%), Postives = 229/399 (57.39%), Query Frame = 1
Query:   85 LRAVRQNAIRRFSKTGLPTRKDEAWRWTDLSLLREQSRTVAAHPVDLKSM-DGPFAGLD-AWRMIFVNGVLQGEASDL---PPGLCAQSLRAALQDDAAIADRLRDSADAPFLALNTALLNDGAYICVAADTRVSKPLHLVFFNT---GNAQI---RNLVVLEPHANVTLLESHYGPAGAEYFVNNASDVQLGEGARLAHYRDQAESQNALHFHFLNARLDSHTVYDGFTLTRGARLSRNEVHVEIAGSDALCSLNGVSMLNGSQIADTTCVMNHRAPGSRSHQMFRTILDGKSQGIFQGLIRVAKPAQRTDATQQIKAMLLSPHAVQNSKPELEILADDVKCAHGASVGQLDEAALFYLRARGIAEAQARALLTGAFLDDAVAQIQGSDALDAGQVQL 1248
            L A+R   I  F   GLP RK EAWR+T++  L +Q     A    L S+ +G    ++ A +++FVNG L+ + SDL   P G+ A  L  AL D   +        D    ALN A + DG  + VAA   V  P+HL+       G A     RNLVV    +  TL+ESH G     YF N+ +D+Q+  GA L H + Q E   A H   +  R+    VYD F L RGA L+RNEVH  I G+ A C LNG  +    Q  D T V+ H+APGS S ++F+  LDG+++G+FQG I V + AQ+T+  Q  K +LLS  A  ++KPEL I ADDVKC+HGA++G+LD+AALFYLR+RGI EA AR +L  AFL++AV +++     DA + ++
Sbjct:   30 LDALRSQGIEAFRANGLPNRKVEAWRYTNVGGLEKQGFAPLAESAALASLPEGAALAIEGACKIVFVNGRLRADLSDLDHLPEGVHAHGLTEALADLEELIAPASKGRDGALAALNDAFMEDGLVLRVAAGAIVETPIHLISVGVPVEGQAVAFHPRNLVVAGKGSRATLIESHIGAGEGSYFSNSITDIQVARGATLTHAKLQDEGPKAFHVALVRVRIGDEAVYDNFVLHRGAELARNEVHARIDGTGAECRLNGAYLGANRQHMDNTTVIEHKAPGSSSSEVFKGALDGRARGVFQGRIVVHRDAQQTEGNQLNKTLLLSRDAEMDTKPELVIYADDVKCSHGATIGELDDAALFYLRSRGIDEATARDILVSAFLNEAVEELRDPTLADAFRARI 428          
BLAST of mRNA_P-wetherbeei_contig6922.1.1 vs. uniprot
Match: UPI001EE20321 (Fe-S cluster assembly protein SufD n=1 Tax=Methylobacterium iners TaxID=418707 RepID=UPI001EE20321)

HSP 1 Score: 272 bits (695), Expect = 1.790e-83
Identity = 174/416 (41.83%), Postives = 237/416 (56.97%), Query Frame = 1
Query:   97 RQNAIRRFSKTGLPTRKDEAWRWTDLSLLREQSRTVAAHPVDLKSMD---------GPFAGLDAWRMIFVNGVLQGEASDL---PPGLCAQSLRAALQDDAAIADRL---RDSADAPFLALNTALLNDGAYICVAADTRVSKPLHLVFFNTGNAQI----RNLVVLEPHANVTLLESHYGPAGAEYFVNNASDVQLGEGARLAHYRDQAESQNALHFHFLNARLDSHTVYDGFTLTRGARLSRNEVHVEIAGSDALCSLNGVSMLNGSQIADTTCVMNHRAPGSRSHQMFRTILDGKSQGIFQGLIRVAKPAQRTDATQQIKAMLLSPHAVQNSKPELEILADDVKCAHGASVGQLDEAALFYLRARGIAEAQARALLTGAFLDDAVAQIQGSDALDAGQVQLNMRDTISTWLAQK 1287
            R+ A R F   GLPTR+ EA+++TDLS     +   AAHP ++ S +           FAG++A R+ FVNG L  + SDL   P G+    L  AL +  A+ D+L   R +++ P   LNTA L DGA I V A  +V  PLHL F  T +       R LVVL   A VT+LESH GP G  Y  N+A DV + + A   H R  AE + A+    L+A+L +    +   L  GA LSR++V++  AG+DA   +NG SMLNGSQ+ADTT + +H A G  S ++F+T++DG + G+FQG I V + AQ+TD       ++LS      +KPELEI ADDV C HGA+ G LD+  LFYL ARG+ +AQA +LL  AFL +AV  +    A +A   +      I  WLA +
Sbjct:   34 REEAFRYFEAVGLPTRRVEAFKYTDLS----SAFRDAAHPAEVPSAELAAAVVAGAQGFAGIEAVRLTFVNGHLIADQSDLGRIPAGVTVTPLTQALSEGHALLDQLTPVRQASENPIYQLNTAFLADGALIAVKAGAKVETPLHLRFIATVSEAFSTATRALVVLGEGAEVTVLESHEGPDGVAYQPNDALDVTVADNAAFRHVRLNAEGREAVALSTLSAKLGAQASIETVNLVVGAVLSRHQVYLNFAGADAKAIVNGASMLNGSQLADTTFLADHAATGGVSRELFKTVVDGAATGVFQGKIIVQQAAQQTDGKMMSACLILSDDGQMMNKPELEIFADDVACGHGATCGALDDDLLFYLMARGLPKAQAESLLVQAFLGEAVEAVSHEAAREALVAE------IERWLAAR 439          
BLAST of mRNA_P-wetherbeei_contig6922.1.1 vs. uniprot
Match: A0A6N7GQ51_9HYPH (Fe-S cluster assembly protein SufD n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6N7GQ51_9HYPH)

HSP 1 Score: 269 bits (687), Expect = 2.800e-82
Identity = 163/415 (39.28%), Postives = 238/415 (57.35%), Query Frame = 1
Query:   79 PRLRAVRQNAIRRFSKTGLPTRKDEAWRWTDLSLLREQSRTVAAHP-----VDLKSMDGPFAGLDAWRMIFVNGVLQGEASD---LPPGLCAQSLRAALQ-DDAAIADRLRD--SADAPFLALNTALLNDGAYICVAADTRVSKPLHLVFFNTGNAQI----RNLVVLEPHANVTLLESHYGPAGAEYFVNNASDVQLGEGARLAHYRDQAESQNALHFHFLNARLDSHTVYDGFTLTRGARLSRNEVHVEIAGSDALCSLNGVSMLNGSQIADTTCVMNHRAPGSRSHQMFRTILDGKSQGIFQGLIRVAKPAQRTDATQQIKAMLLSPHAVQNSKPELEILADDVKCAHGASVGQLDEAALFYLRARGIAEAQARALLTGAFLDDAVAQIQGSDALDAGQVQLNMRDTISTWL 1278
            P L A+R++  +RF   GLP R+ E W++TDL  L   ++ +AA P     V  K      A ++  R++ V+G    E SD   L  GL  +S+  AL   DAA+A+RL      D   +ALNTA + DG  I VAA   +++PLHLVFFN+G A      R+L V+   A   L+ESH G  G++Y VN A ++++G+ A + H +   E   +LH   L A + +H  ++ F  T GA + RN++ +   G   +  + G ++LNG Q ADTT V +H A    S ++F+T+LDG+S+G+FQG I V   AQ+TDA     A+LLS  A  +SKPELEI ADDV+C HGA+ G LD+  LFYL ARGI   +A AL+  AF+ +A+  I+ +   D       + + ++ WL
Sbjct:   28 PGLAALRESEFKRFETAGLPHRRVEEWKYTDLRALMRDAKPLAAPPGADAKVRAKDAGAALAAVEGRRIVLVDGAFVPELSDFAGLEGGLTIRSMAEALAAGDAAVAERLGRIVPTDNVAVALNTAFMGDGVVIEVAAGAALTRPLHLVFFNSGGAPASVFTRSLAVIGKGARAMLIESHEGTPGSDYQVNTALEIEVGDEAHVDHIKITGEGAGSLHVSSLMAAVGAHARFNEFLFTTGAAVVRNQMFIHFKGEGTVAGIRGATLLNGRQHADTTLVADHTAGACISREVFKTVLDGESRGVFQGKIIVQSHAQKTDAKMAALALLLSEEAEADSKPELEIFADDVQCGHGATTGALDDDLLFYLHARGIPPKEAEALMIQAFVGEAIEGIEHAGLRDT------LLEHVAAWL 436          
BLAST of mRNA_P-wetherbeei_contig6922.1.1 vs. uniprot
Match: UPI0011F2C6FD (Fe-S cluster assembly protein SufD n=1 Tax=Siccirubricoccus phaeus TaxID=2595053 RepID=UPI0011F2C6FD)

HSP 1 Score: 268 bits (686), Expect = 2.800e-82
Identity = 172/396 (43.43%), Postives = 225/396 (56.82%), Query Frame = 1
Query:   79 PRLRAVRQNAIRRFSKTGLPTRKDEAWRWTDLSLLREQSRTVAAHPVD----LKSMDGPFAGLDAWRMIFVNGVLQGEASDLPPG-LCAQSLRAALQDDAAIADRLRDSADAPFLALNTALLNDGAYICVAADTRVSKPLHLVFFNTGNAQI----RNLVVLEPHANVTLLESHYGPAGAEYFVNNASDVQLGEGARLAHYRDQAESQNALHFHFLNARLDSHTVYDGFTLTRGARLSRNEVHVEIAGSDALCSLNGVSMLNGSQIADTTCVMNHRAPGSRSHQMFRTILDGKSQGIFQGLIRVAKPAQRTDATQQIKAMLLSPHAVQNSKPELEILADDVKCAHGASVGQLDEAALFYLRARGIAEAQARALLTGAFLDDAVAQIQGSDALDAGQ 1239
            P LRA+R+ A   F   G PTR+ EAW++TDL L+ E         +D    L +  GP+      R +F +G  + + S L      A SL AAL    A    L   A+A  +ALNTAL  DG  + V A         L F + G        R+L+ LE  A++TL+E+  GPA A Y  N   +++L EGA L H R Q E   A       AR+ S   YD FTL  G +L RNE+HV + G  A C +NG  +L   Q ADTT V++H AP   S Q ++T+L G+S+G+FQG I V + AQRTD  Q  +A+LLSP A  +SKP+LEI ADDVKC+HGA+VG++D   LFYLRARGI EA+ARA+L  AFL +AV  +Q   A DA Q
Sbjct:   28 PWLRALREAAAEAFRIQGFPTRRAEAWKYTDLRLVAEAGFEEPLSAIDDDPALPAPRGPY------RAVFQDGRFREDLSTLEEAPFAAASLAAALPALEARLGALARPAEAALVALNTALFEDGLVVTVPAGVAGGVLELLSFASAGERPAAFHPRHLIRLEAGASLTLIETATGPAKARYLHNPVYEIELAEGATLTHARLQQEGLAAFQLGTAYARVASGATYDNFTLNAGGKLVRNEIHVVLEGPKAACHMNGAQLLRDGQHADTTTVLDHAAPDCASRQTYKTVLSGRSRGVFQGKIHVHQVAQRTDGYQMNQALLLSPEAEIDSKPQLEIYADDVKCSHGATVGEIDADQLFYLRARGIPEAKARAMLVEAFLTEAVEGVQDPVARDALQ 417          
BLAST of mRNA_P-wetherbeei_contig6922.1.1 vs. uniprot
Match: A0A858R7Y9_9PROT (Fe-S cluster assembly protein SufD n=1 Tax=Rhodospirillaceae bacterium B3 TaxID=2728875 RepID=A0A858R7Y9_9PROT)

HSP 1 Score: 266 bits (679), Expect = 4.250e-81
Identity = 172/418 (41.15%), Postives = 236/418 (56.46%), Query Frame = 1
Query:   16 TLEHALLSEVKAQEAGMASVSPR-----LRAVRQNAIRRFSKTGLPTRKDEAWRWTDLSLLREQSRTVAAH--PVDLKSMDGPFAGLDAWRMIFVNGVLQGEASD---LPPGLCAQSLRAALQDD----AAIADRLRDSADAPFLALNTALLNDGAYICVAADTRVSKPLHLVFFNT-GNAQI----RNLVVLEPHANVTLLESHYGPAGAEYFVNNASDVQLGEGARLAHYRDQAESQNALHFHFLNARLDSHTVYDGFTLTRGARLSRNEVHVEIAGSDALCSLNGVSMLNGSQIADTTCVMNHRAPGSRSHQMFRTILDGKSQGIFQGLIRVAKPAQRTDATQQIKAMLLSPHAVQNSKPELEILADDVKCAHGASVGQLDEAALFYLRARGIAEAQARALLTGAFLDDAVAQIQ 1212
            T ++  +  + AQ +G+A   P      L+ +R   + RF+K GLPT++ EAW++T L  L + S   AA   PV +  +     G  A RM+FV+G  + + S    LP G+  +SL  AL  D    A +  R       P LALNTA L DG  + V     V+ P+  VF  T G+A      R L+V E +A  T++E H G  GA Y  N AS+V  G GARL HY+ Q ES +A H     A L     YD F L  GARL+R+E    + G+   C ++      G+Q  D T +++H  P   S ++ + ++DG+++ +FQG I V   AQ+TD  Q  +A+LLSP A  NSKPELEI ADDVKC+HGA+ G+LD+  LFYLRARGI   QARALL GAFLD+AV ++Q
Sbjct:    2 TTDNTTVQALIAQASGLAPTLPGAGLPWLKDLRAAGLDRFAKLGLPTQRQEAWKFTSLRPLEKVSFGPAAESAPVSIDRIPSVLPGGPAHRMVFVDGRFRADLSQPGALPAGVVLESLGEALARDPDRVAGLLGRTATFDSHPLLALNTAFLADGLLLYVPRGVTVADPIEAVFLGTPGSAPAAWHPRLLLVAEENAEATVVEHHLGLPGATYLSNVASEVVAGPGARLHHYKIQMESLDAFHLATATAHLGRDATYDTFVLNLGARLARHEARSVLDGTGITCRVSAAYAAAGNQHTDFTTLIDHAKPHCTSREVVKGVIDGQARAVFQGKIIVRPDAQKTDGYQLNRALLLSPQAEINSKPELEIYADDVKCSHGATAGELDDDQLFYLRARGIPIDQARALLVGAFLDEAVEEVQ 419          
BLAST of mRNA_P-wetherbeei_contig6922.1.1 vs. uniprot
Match: A0A0A0D3R9_9PROT (SufBD_N domain-containing protein n=5 Tax=Bacteria TaxID=2 RepID=A0A0A0D3R9_9PROT)

HSP 1 Score: 264 bits (675), Expect = 1.830e-80
Identity = 164/406 (40.39%), Postives = 226/406 (55.67%), Query Frame = 1
Query:   97 RQNAIRRFSKTGLPTRKDEAWRWTDLSLLREQSRTVAAHPVDLKSMDG--PFAGLDAWRMIFVNGVLQGEAS---DLPPGLCAQSLRAALQ-DDAAIADRLRDSADAPFLALNTALLNDGAYICVAADTRVSKPLHLVFFNTGNAQI-----RNLVVLEPHANVTLLESHYGPAGAEYFVNNASDVQLGEGARLAHYRDQAESQNALHFHFLNARLDSHTVYDGFTLTRGARLSRNEVHVEIAGSDALCSLNGVSMLNGSQIADTTCVMNHRAPGSRSHQMFRTILDGKSQGIFQGLIRVAKPAQRTDATQQIKAMLLSPHAVQNSKPELEILADDVKCAHGASVGQLDEAALFYLRARGIAEAQARALLTGAFLDDAVAQIQGSDALDAGQVQLNMRDTISTWLA 1281
            R+  + RF   GLPTRK EAW++TDL  L +     A  P D    +    F       M+FVNG L+ E S    LP GL      AAL+  DA +  R   +ADA  + LN AL+ DGA + +A    +  P+ LVF +   A       R LV+   ++  TL+E+++G     YF N   D ++G+GARL HYR Q+E   A+H    +A +     YD FTL+ GA L+R EV     G      + G  + +GS+  DTT +++H  P  RS ++F+ +LDGK +G+FQG I V + AQRTD  Q  +A++LS  A  +SKPELEI ADDVKC+HGA+VG++D  ALFYLRARGI E  ARALL  AFL +A+ ++          V+      +  WLA
Sbjct:   37 REAGMARFESLGLPTRKQEAWKYTDLRRLEKLGLNGATAPADAALPEALRAFVPAQGPSMVFVNGRLRPELSHLDSLPKGLRFDGYAAALEAGDAEVETRFARAADASLVELNAALVEDGAVLRIAPGAVIDAPVRLVFLSAPGAAAVASHPRILVLAGANSQATLIEAYHGTDDTGYFTNAVVDAEIGDGARLRHYRRQSEGLQAVHLLNGSATIGRDATYDSFTLSLGADLARTEVVATFTGRGGNGHVTGAYLADGSRHIDTTTLIDHAVPDCRSREVFKGVLDGKGRGVFQGKIIVRRDAQRTDGYQLNRALMLSRTAEIDSKPELEIYADDVKCSHGATVGEIDAEALFYLRARGIDERTARALLVEAFLREALEEVADE------AVREEFEAAVGQWLA 436          
BLAST of mRNA_P-wetherbeei_contig6922.1.1 vs. uniprot
Match: A0A2S6UG01_9PROT (FeS cluster assembly protein SufD n=1 Tax=Alphaproteobacteria bacterium MarineAlpha4_Bin1 TaxID=2013074 RepID=A0A2S6UG01_9PROT)

HSP 1 Score: 263 bits (672), Expect = 3.340e-80
Identity = 172/419 (41.05%), Postives = 235/419 (56.09%), Query Frame = 1
Query:   76 SPRLRAVRQNAIRRFSKTGLPTRKDEAWRWTDLSLLRE--------QSRTVAAHPVDLKSMDGPFAGLDAWRMIFVNG---VLQGEASDLPPGLCAQSLRAALQDDAA--IADRLRDSADAPFLALNTALLNDGAYICVAADTRVSKPLHLVFFNTGNAQI-----RNLVVLEPHANVTLLESHYGPAGAEYFVNNASDVQLGEGARLAHYRDQAESQNALHFHFLNARLDSHTVYDGFTLTRGARLSRNEVHVEIAGSDALCSLNGVSMLNGSQIADTTCVMNHRAPGSRSHQMFRTILDGKSQGIFQGLIRVAKPAQRTDATQQIKAMLLSPHAVQNSKPELEILADDVKCAHGASVGQLDEAALFYLRARGIAEAQARALLTGAFLDDAVAQIQGSDALDAGQVQLNMRDTISTWL 1278
            +P + A+R +A+  + + GLPT + EAW++T+L  L          +   VA  P  + ++DG      A+R +FVNG     Q    DLP G+   SL AA+  D       R+ D+   P  ALNTA + DG Y+ +A +  +  PLHL+   +          R+LVVL  +A  TL+ESH G    E F N   +  LG  A L HY+ Q E+ +A H  F   RL     YDGF L  GARL+RNEV V++ G    C LNG  +  G Q  D T  ++H AP S S ++++ +LD +++G+FQG I V K AQ+T+  Q  K +LLS     +SKPELEI ADDVKC HGA+ G+L+E ALFYLRARGIA A+ARA+L  AFL DAVA+IQ      A Q +   +  +  WL
Sbjct:   17 APWIDALRGDALACYREQGLPTARSEAWKFTNLRRLERIAFAPSPAKGTPVAEIPDGIAALDG------AYRAVFVNGRFDAAQSRLGDLPKGVEIGSL-AAVDPDLLEPYLGRIADTQVHPLAALNTAYMADGLYMKLADNAVLDAPLHLISIASAGETAQRFHPRHLVVLGENATATLVESHVG--AGETFSNTVLEADLGVSAMLNHYKLQNEAPDAFHIAFSQIRLADRASYDGFVLQTGARLARNEVRVQL-GDRVECRLNGAYLGRGDQHIDNTTFIDHTAPNSTSREVYKGVLDDRARGVFQGKILVRKDAQKTNGHQLNKTLLLSRGTEMDSKPELEIYADDVKCGHGATTGELEEDALFYLRARGIASAEARAMLVAAFLSDAVAEIQ------AEQPRAAFQAVVDQWL 419          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6922.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3C1FPA6_9PROT2.860e-9546.94Fe-S cluster assembly protein SufD n=6 Tax=Alphapr... [more]
A0A545TPA0_9PROT4.380e-8740.63Fe-S cluster assembly protein SufD n=1 Tax=Denitro... [more]
A0A5B2V944_9HYPH1.200e-8640.58Fe-S cluster assembly protein SufD n=1 Tax=Salinar... [more]
UPI0019F01CC06.450e-8541.85Fe-S cluster assembly protein SufD n=1 Tax=Proteob... [more]
UPI001EE203211.790e-8341.83Fe-S cluster assembly protein SufD n=1 Tax=Methylo... [more]
A0A6N7GQ51_9HYPH2.800e-8239.28Fe-S cluster assembly protein SufD n=1 Tax=Hyphomi... [more]
UPI0011F2C6FD2.800e-8243.43Fe-S cluster assembly protein SufD n=1 Tax=Sicciru... [more]
A0A858R7Y9_9PROT4.250e-8141.15Fe-S cluster assembly protein SufD n=1 Tax=Rhodosp... [more]
A0A0A0D3R9_9PROT1.830e-8040.39SufBD_N domain-containing protein n=5 Tax=Bacteria... [more]
A0A2S6UG01_9PROT3.340e-8041.05FeS cluster assembly protein SufD n=1 Tax=Alphapro... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6922contigP-wetherbeei_contig6922:474..1781 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1101192.KB910516_gene889
Preferred namesufD
PFAMsUPF0051
Model size1308
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K09015
Hectar predicted targeting categoryother localisation
Exons1
Evalue5.12e-82
EggNOG OGsCOG0719@1|root,COG0719@2|Bacteria,1MVK0@1224|Proteobacteria,2TTK9@28211|Alphaproteobacteria,1JS3N@119045|Methylobacteriaceae
DescriptionFeS assembly protein SufD
Cds size1308
COG categoryO
BRITEko00000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186946.1890209-CDS-P-wetherbeei_contig6922:473..17811683186946.1890209-CDS-P-wetherbeei_contig6922:473..1781Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6922 474..1781 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6922.1.1prot_P-wetherbeei_contig6922.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6922 474..1781 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6922.1.1

>prot_P-wetherbeei_contig6922.1.1 ID=prot_P-wetherbeei_contig6922.1.1|Name=mRNA_P-wetherbeei_contig6922.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=436bp
MAEIATLEHALLSEVKAQEAGMASVSPRLRAVRQNAIRRFSKTGLPTRKD
EAWRWTDLSLLREQSRTVAAHPVDLKSMDGPFAGLDAWRMIFVNGVLQGE
ASDLPPGLCAQSLRAALQDDAAIADRLRDSADAPFLALNTALLNDGAYIC
VAADTRVSKPLHLVFFNTGNAQIRNLVVLEPHANVTLLESHYGPAGAEYF
VNNASDVQLGEGARLAHYRDQAESQNALHFHFLNARLDSHTVYDGFTLTR
GARLSRNEVHVEIAGSDALCSLNGVSMLNGSQIADTTCVMNHRAPGSRSH
QMFRTILDGKSQGIFQGLIRVAKPAQRTDATQQIKAMLLSPHAVQNSKPE
LEILADDVKCAHGASVGQLDEAALFYLRARGIAEAQARALLTGAFLDDAV
AQIQGSDALDAGQVQLNMRDTISTWLAQKLVIENV*
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mRNA from alignment at P-wetherbeei_contig6922:474..1781-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6922.1.1 ID=mRNA_P-wetherbeei_contig6922.1.1|Name=mRNA_P-wetherbeei_contig6922.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1308bp|location=Sequence derived from alignment at P-wetherbeei_contig6922:474..1781- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCTGAAATAGCAACATTGGAGCATGCGCTGCTAAGCGAGGTTAAGGC GCAGGAAGCCGGAATGGCGTCGGTTTCGCCGCGTCTTCGTGCTGTGCGTC AGAATGCGATACGGCGTTTTTCAAAAACCGGCCTGCCGACACGAAAAGAT GAAGCCTGGCGGTGGACGGATTTATCGCTGTTGCGCGAACAGTCTCGCAC TGTCGCAGCGCACCCGGTTGATCTCAAAAGCATGGATGGTCCGTTTGCCG GGCTTGACGCCTGGCGGATGATTTTTGTCAATGGCGTGTTGCAAGGTGAA GCAAGCGATCTGCCTCCTGGCCTGTGTGCGCAATCTTTGCGCGCCGCCTT GCAGGACGATGCTGCGATAGCGGACCGGTTGCGCGATAGCGCCGACGCTC CATTCCTTGCGTTGAATACCGCTTTGTTGAACGATGGCGCATATATTTGC GTTGCAGCGGATACACGGGTTTCCAAACCGCTGCATCTGGTTTTTTTCAA TACCGGCAATGCCCAAATCCGCAATCTTGTGGTGCTTGAACCGCACGCCA ACGTAACGCTTCTGGAAAGCCATTACGGGCCGGCGGGCGCAGAATATTTT GTCAATAACGCAAGCGATGTGCAGCTTGGCGAAGGGGCGCGTCTGGCCCA TTACCGTGATCAGGCGGAAAGCCAAAACGCCCTGCATTTTCATTTTCTGA ACGCCCGGCTTGATTCGCATACGGTTTATGACGGCTTCACATTAACCCGT GGGGCGCGCCTGTCGCGCAACGAGGTGCATGTTGAAATTGCGGGCAGTGA CGCACTGTGCAGCCTGAACGGCGTCAGCATGCTGAACGGATCGCAGATTG CCGACACCACCTGCGTCATGAACCATCGCGCACCGGGGAGCCGCAGCCAC CAGATGTTTCGCACTATTCTTGATGGTAAATCCCAGGGCATATTTCAGGG GCTGATCCGGGTTGCAAAACCTGCACAGCGCACTGACGCAACGCAGCAGA TCAAGGCCATGCTCTTATCGCCGCATGCCGTGCAAAATTCCAAACCGGAA CTGGAAATTCTGGCGGATGATGTGAAATGCGCCCATGGCGCATCGGTTGG GCAGTTGGATGAAGCAGCACTTTTTTATCTGCGCGCGCGCGGCATAGCTG AGGCGCAGGCGCGGGCATTATTGACCGGCGCATTTCTTGATGACGCCGTG GCGCAGATACAGGGCAGCGATGCGCTGGACGCCGGACAGGTTCAGCTAAA CATGCGGGACACAATCAGTACATGGCTGGCGCAGAAACTGGTGATTGAAA ATGTCTAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6922:474..1781-

>mRNA_P-wetherbeei_contig6922.1.1 ID=mRNA_P-wetherbeei_contig6922.1.1|Name=mRNA_P-wetherbeei_contig6922.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1308bp|location=Sequence derived from alignment at P-wetherbeei_contig6922:474..1781- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCTGAAATAGCAACATTGGAGCATGCGCTGCTAAGCGAGGTTAAGGC
GCAGGAAGCCGGAATGGCGTCGGTTTCGCCGCGTCTTCGTGCTGTGCGTC
AGAATGCGATACGGCGTTTTTCAAAAACCGGCCTGCCGACACGAAAAGAT
GAAGCCTGGCGGTGGACGGATTTATCGCTGTTGCGCGAACAGTCTCGCAC
TGTCGCAGCGCACCCGGTTGATCTCAAAAGCATGGATGGTCCGTTTGCCG
GGCTTGACGCCTGGCGGATGATTTTTGTCAATGGCGTGTTGCAAGGTGAA
GCAAGCGATCTGCCTCCTGGCCTGTGTGCGCAATCTTTGCGCGCCGCCTT
GCAGGACGATGCTGCGATAGCGGACCGGTTGCGCGATAGCGCCGACGCTC
CATTCCTTGCGTTGAATACCGCTTTGTTGAACGATGGCGCATATATTTGC
GTTGCAGCGGATACACGGGTTTCCAAACCGCTGCATCTGGTTTTTTTCAA
TACCGGCAATGCCCAAATCCGCAATCTTGTGGTGCTTGAACCGCACGCCA
ACGTAACGCTTCTGGAAAGCCATTACGGGCCGGCGGGCGCAGAATATTTT
GTCAATAACGCAAGCGATGTGCAGCTTGGCGAAGGGGCGCGTCTGGCCCA
TTACCGTGATCAGGCGGAAAGCCAAAACGCCCTGCATTTTCATTTTCTGA
ACGCCCGGCTTGATTCGCATACGGTTTATGACGGCTTCACATTAACCCGT
GGGGCGCGCCTGTCGCGCAACGAGGTGCATGTTGAAATTGCGGGCAGTGA
CGCACTGTGCAGCCTGAACGGCGTCAGCATGCTGAACGGATCGCAGATTG
CCGACACCACCTGCGTCATGAACCATCGCGCACCGGGGAGCCGCAGCCAC
CAGATGTTTCGCACTATTCTTGATGGTAAATCCCAGGGCATATTTCAGGG
GCTGATCCGGGTTGCAAAACCTGCACAGCGCACTGACGCAACGCAGCAGA
TCAAGGCCATGCTCTTATCGCCGCATGCCGTGCAAAATTCCAAACCGGAA
CTGGAAATTCTGGCGGATGATGTGAAATGCGCCCATGGCGCATCGGTTGG
GCAGTTGGATGAAGCAGCACTTTTTTATCTGCGCGCGCGCGGCATAGCTG
AGGCGCAGGCGCGGGCATTATTGACCGGCGCATTTCTTGATGACGCCGTG
GCGCAGATACAGGGCAGCGATGCGCTGGACGCCGGACAGGTTCAGCTAAA
CATGCGGGACACAATCAGTACATGGCTGGCGCAGAAACTGGTGATTGAAA
ATGTCTAA
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