mRNA_P-wetherbeei_contig6881.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6881.1.1 vs. uniprot
Match: W7TS45_9STRA (Glycerophosphocholine acyltransferase 1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TS45_9STRA) HSP 1 Score: 155 bits (393), Expect = 5.530e-42 Identity = 81/181 (44.75%), Postives = 120/181 (66.30%), Query Frame = 1
Query: 13 QMTSLYVHILPGWLLLTLRWYGDSDENGGCGDS--GIGLADMGCALLVYLAWQVAYFYKTEVVDRARLDADPEIATSLRWLTQDTKGAMYRLVRLTVRAMGVLHADEEFDHRTTKTKASRGCAVVFMTSQLLYTFSTMVLAPFLFRHFRLNLAYNCLVFSMALWNGSNYYIEASSLLLPTR 549
++TSLY+H+ PG LL LRWY S D+ + + D+ A +VYLAWQ+ Y+ K E++DRARL+ADPE+ TSLRWL +D K A++RLV RA GVL DE FDHRT KTK+ +F+ +Q +YT T + A ++ F+L++AY +F++A++NG+NYYI+ S+ ++
Sbjct: 255 KITSLYIHVYPGLLLYALRWYPSSPSAAATLDACGSMDVKDLLPAAVVYLAWQIMYYVKIEILDRARLEADPELQTSLRWLAKDHKNALHRLVLRLTRATGVLAPDERFDHRTLKTKS------IFILTQFIYTLLTCLPALVIYHSFQLHVAYGLGMFTVAVFNGANYYIDVFSVRYQSK 429
BLAST of mRNA_P-wetherbeei_contig6881.1.1 vs. uniprot
Match: D7FQ84_ECTSI (Glycerophosphocholine acyltransferase 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ84_ECTSI) HSP 1 Score: 148 bits (374), Expect = 8.920e-39 Identity = 81/180 (45.00%), Postives = 107/180 (59.44%), Query Frame = 1
Query: 13 QMTSLYVHILPGWLLLTLRWYGDSDENGG-------CGDSGIGLADMGCALLVYLAWQVAYFYKTEVVDRARLDADPEIATSLRWLTQDTKGAMYRLVRLTVRAMGVLHADEEFDHRTTKTKASRGCAVVFMTSQLLYTFSTMVLAPFLFRHFRLNLAYNCLVFSMALWNGSNYYIEASS 531
+MTS ++H+ P WL LTLRWY GG C D G + D+G A+ +YLAWQV YF+KTE+ D+ +LDADPEI TSLRWLT M+++V +R G+ DE FD T KTK ++FM SQL++T + PFL+ +++ VF ALWN SNYYIE S
Sbjct: 253 KMTSCFIHLFPSWLALTLRWYPLDPMRGGTAGAEPECQD-GFDMGDVGTAMGMYLAWQVLYFFKTEIADKPKLDADPEIQTSLRWLTTSPSNPMHKIVLALMRKTGMFKEDETFDPTTFKTK------MIFMGSQLVFTVLVSLPTPFLYNSKWASISLAFFVFLCALWNSSNYYIEVFS 425
BLAST of mRNA_P-wetherbeei_contig6881.1.1 vs. uniprot
Match: A0A6G0WYG3_9STRA (Glycerophosphocholine acyltransferase 1 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WYG3_9STRA) HSP 1 Score: 125 bits (314), Expect = 3.810e-31 Identity = 70/190 (36.84%), Postives = 107/190 (56.32%), Query Frame = 1
Query: 13 QMTSLYVHILPGWLLLTLRWYGDSDE----NGGCGDSGIG------LADMGCALLVYLAWQVAYFYKTEVVDRARLDADPEIATSLRWLTQDTKGAMYRLVRLTVRAMGVLHADEEFDHRTTKTKASRGCAVVFMTSQLLYTFSTMVLAPFLFRHFRLNLAYNCLVFSMALWNGSNYYIEASSLLLPTRI 552
+M+ +++H++P L +++W+G + +G G G LAD G A + YL WQ YF KTEVVDR +LDA P++ TSLRWLT D K V R +GV+ EE+D +TTKTK ++F+T Q +YTF T + +FR L+ Y +F+ A+ NG++YY E + + ++
Sbjct: 175 RMSGVFIHLMPCLLYYSIQWFGCASPLSIFSGSSGQPASGPVDSLELADFGYATIGYLIWQTLYFAKTEVVDREKLDARPDLLTSLRWLTTDKKNGFSLFVLAICRQIGVMGRTEEYDPKTTKTK------IIFVTGQFVYTFCTFLPTILIFRSHFLHCLYIQFIFAAAVHNGASYYFEVFAKIYQKKL 358
BLAST of mRNA_P-wetherbeei_contig6881.1.1 vs. uniprot
Match: A0A485LCA6_9STRA (Glycerophosphocholine acyltransferase 1 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LCA6_9STRA) HSP 1 Score: 125 bits (313), Expect = 8.340e-31 Identity = 69/187 (36.90%), Postives = 105/187 (56.15%), Query Frame = 1
Query: 13 QMTSLYVHILPGWLLLTLRWYGDSD-------ENGGCGDSGIGLADMGCALLVYLAWQVAYFYKTEVVDRARLDADPEIATSLRWLTQDTKGAMYRLVRLTVRAMGVLHADEEFDHRTTKTKASRGCAVVFMTSQLLYTFSTMVLAPFLFRHFRLNLAYNCLVFSMALWNGSNYYIEASSLLLPTRI 552
+M+ +++H++P L +RWYG + + + + D A ++YL WQ YF KTE+ DR +LDA PE+ TSLRWLT D K V RAM V+ EE++ RTTKTK ++F+ +QL+YT T PFLFR ++ AY +F+ A+ NG++YYIE + + ++
Sbjct: 204 RMSGVFIHLMPCLLYYAIRWYGCAPLFALPRFPSTDPPHDSLDVVDFTFATILYLFWQACYFVKTEMFDREKLDARPELLTSLRWLTTDKKNGFSLFVLSLCRAMRVMGPTEEYNSRTTKTK------LIFLAAQLVYTLGTFAPTPFLFRSHFVHCAYIQFIFAAAVHNGASYYIEVFAKMYEKKL 384
BLAST of mRNA_P-wetherbeei_contig6881.1.1 vs. uniprot
Match: A0A7S2EA71_9STRA (Glycerophosphocholine acyltransferase 1 n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EA71_9STRA) HSP 1 Score: 119 bits (299), Expect = 2.220e-28 Identity = 69/179 (38.55%), Postives = 99/179 (55.31%), Query Frame = 1
Query: 13 QMTSLYVHILPGWLLLTLRWYGDSDENGGCG---DSGIGLADMGCA------LLVYLAWQVAYFYKTEVVDRARLDADPEIATSLRWLTQDTKGAMYRLVRLTVRAMGVLHADEEFDHRTTKTKASRGCAVVFMTSQLLYTFSTMVLAPFLFRHFRLNLAYNCLVFSMALWNGSNYYIE 522
++TS +H++P L RW D + C D G +G +L Y++WQ Y +TEV+DR RL DP++ATS+RW+T+DTK M+++ RA G+L +E+FD T KTK VF+ QL + ST+V PF+F + + LVF A+WNGSNYY E
Sbjct: 270 KITSFALHMMPCLLTFLQRWPSDG-SSAMCPQQLDEGNAECKLGVQGAFTDPVLFYISWQAYYIIQTEVIDRERLKGDPDLATSMRWITRDTKNPMHKMALSACRATGILKQNEKFDPETVKTKT------VFVAFQLFFMMSTLVPVPFMFSNCDFHWVCLMLVFGFAVWNGSNYYFE 441
BLAST of mRNA_P-wetherbeei_contig6881.1.1 vs. uniprot
Match: A0A7S3MDK0_9STRA (Glycerophosphocholine acyltransferase 1 n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MDK0_9STRA) HSP 1 Score: 119 bits (299), Expect = 4.400e-28 Identity = 67/183 (36.61%), Postives = 102/183 (55.74%), Query Frame = 1
Query: 13 QMTSLYVHILPGWLLLTLRWYGDS----------DENGGCGDSGIGLADMGCALLVYLAWQVAYFYKTEVVDRARLDADPEIATSLRWLTQDTKGAMYRLVRLTVRAMGVLHADEEFDHRTTKTKASRGCAVVFMTSQLLYTFSTMVLAPFLFRHFRLNLAYNCLVFSMALWNGSNYYIEASS 531
++ S+Y+HILP L TLR S D G + L D A+L+Y+ WQ Y YKTE +D++RLD+DP + TSLRWL QDTK A R R +GV +E++D RT KTK +VF+ +QL++T + + P ++ + +L + + + A++NG ++YIE S
Sbjct: 177 KIVSVYIHILPSMLYYTLRHNNSSLDIFRQAIPGDVCGSANCDRLYLTDYLLAVLLYMFWQFIYLYKTEFLDKSRLDSDPSLMTSLRWLAQDTKNAAARFFLKMFRLIGVFSKEEDYDSRTMKTK------IVFVVAQLIFTLVSFLPTPLMYHYSGFHLTWILFIVTSAVFNGGSFYIEVFS 353
BLAST of mRNA_P-wetherbeei_contig6881.1.1 vs. uniprot
Match: A0A3L6VCE2_9STRA (Glycerophosphocholine acyltransferase 1 n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6VCE2_9STRA) HSP 1 Score: 115 bits (287), Expect = 9.350e-28 Identity = 74/190 (38.95%), Postives = 101/190 (53.16%), Query Frame = 1
Query: 13 QMTSLYVHILPGWLLLTLRWYGDSDEN---------------GGCGDSGIGLADMGCALLVYLAWQVAYFYKTEVVDRARLDADPEIATSLRWLTQDTKGAMYRLVRLTVRAMGVLHADEEFDHRTTKTKASRGCAVVFMTSQLLYTFSTMVLAPFLFRHFRLNLAYNCLVFSMALWNGSNYYIEASSLL 537
+M+ +++HI+P L + W+G S + DS G+ D A++ YL WQV YF KTEVVDRA LDA P++ TSLRWLT D K LV R G++ E +D RTTKTKA +F+ +QL+YT T P LF L+ Y L+F A+ NG++YY E + L
Sbjct: 82 RMSGVFIHIMPCLLYYCVHWHGCSSSSMLLHPPPSVNYFLPPSHAQDSLDGV-DFAYAIIGYLIWQVLYFVKTEVVDRAALDARPDLLTSLRWLTTDRKNGFSLLVLGLCRYGGIMGPTEAYDPRTTKTKA------IFVAAQLVYTVVTFAPTPLLFTSHFLHCMYIQLIFVAAVHNGASYYFEVFAKL 264
BLAST of mRNA_P-wetherbeei_contig6881.1.1 vs. uniprot
Match: A0A7S2B0L6_9STRA (Glycerophosphocholine acyltransferase 1 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B0L6_9STRA) HSP 1 Score: 117 bits (293), Expect = 2.380e-27 Identity = 70/178 (39.33%), Postives = 101/178 (56.74%), Query Frame = 1
Query: 13 QMTSLYVHILPGWLLLTLRWY-----GDSDENGGCGDSGIGLADMGCALLVYLAWQVAYFYKTEVVDRARLDADPEIATSLRWLTQDTKGAMYRLVRLTVRAMGVLHADEEFDHRTTKTKASRGCAVVFMTSQLLYTFSTMVLAPFLFRHFRLNLAYNCLVFSMALWNGSNYYIEASS 531
++T+LY+HILP WL+ RW +E C G A + A L YL WQV ++ KTEVVD A L++D + TSLRW+ D A++RLV +R ++ E FD RT KTK ++FM SQ ++T T++ + ++F +NLAY VF+ ++NG YYIE S
Sbjct: 238 KVTTLYIHILPSWLVYANRWLIAGTGSRFEELAQC--EAFGTAGLFTAFLGYLFWQVLFYVKTEVVDAAFLNSDKDHQTSLRWMALDDSKAVHRLVLWLMRKYQLMGPKERFDPRTHKTK------IIFMASQFVFTAITILPTFLVHKYFLVNLAYVIAVFTAGVYNGGEYYIEVFS 407
BLAST of mRNA_P-wetherbeei_contig6881.1.1 vs. uniprot
Match: A0A397CAQ5_9STRA (Glycerophosphocholine acyltransferase 1 n=10 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397CAQ5_9STRA) HSP 1 Score: 115 bits (287), Expect = 3.550e-27 Identity = 74/190 (38.95%), Postives = 101/190 (53.16%), Query Frame = 1
Query: 13 QMTSLYVHILPGWLLLTLRWYGDSDEN---------------GGCGDSGIGLADMGCALLVYLAWQVAYFYKTEVVDRARLDADPEIATSLRWLTQDTKGAMYRLVRLTVRAMGVLHADEEFDHRTTKTKASRGCAVVFMTSQLLYTFSTMVLAPFLFRHFRLNLAYNCLVFSMALWNGSNYYIEASSLL 537
+M+ +++HI+P L + W+G S + DS G+ D A++ YL WQV YF KTEVVDRA LDA P++ TSLRWLT D K LV R G++ E +D RTTKTKA +F+ +QL+YT T P LF L+ Y L+F A+ NG++YY E + L
Sbjct: 161 RMSGVFIHIMPCLLYYCVHWHGCSSSSMLLHPPPSVNYFLPPSHAQDSLDGV-DFAYAIIGYLIWQVLYFVKTEVVDRAALDARPDLLTSLRWLTTDRKNGFSLLVLGLCRYGGIMGPTEAYDPRTTKTKA------IFVAAQLVYTVVTFAPTPLLFTSHFLHCMYIQLIFVAAVHNGASYYFEVFAKL 343
BLAST of mRNA_P-wetherbeei_contig6881.1.1 vs. uniprot
Match: A0A0L0DIY4_THETB (Glycerophosphocholine acyltransferase 1 n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DIY4_THETB) HSP 1 Score: 115 bits (288), Expect = 6.880e-27 Identity = 66/198 (33.33%), Postives = 101/198 (51.01%), Query Frame = 1
Query: 13 QMTSLYVHILPGWLLLTLRWYGDSDENGGCGDSGIGLADMGCA-------------------------LLVYLAWQVAYFYKTEVVDRARLDADPEIATSLRWLTQDTKGAMYRLVRLTVRAMGVLHADEEFDHRTTKTKASRGCAVVFMTSQLLYTFSTMVLAPFLFRHFRLNLAYNCLVFSMALWNGSNYYIEASS 531
++TS+++H P L TL WY E G+ LA + +YL WQV Y+YKTEV DR++ +AD + TSLRWL+ D K M++LV +R +GV+ E+FD T KTK V+FM +Q +YT T++ P ++ L++A + ++LWNG+N+Y + S
Sbjct: 237 KVTSVFIHAFPAMLTFTLHWYPAVPE-------GVSLATAATTQWAEYNTMASHFHAPISFVGWFVMPMAIYLVWQVLYYYKTEVRDRSKFEADKTLTTSLRWLSADDKNPMHKLVLSLLRRIGVMGPTEKFDASTVKTK------VIFMATQFVYTVITILPIPIIYSSVHLHIALLVALLGVSLWNGANFYFDVFS 421 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6881.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6881.1.1 >prot_P-wetherbeei_contig6881.1.1 ID=prot_P-wetherbeei_contig6881.1.1|Name=mRNA_P-wetherbeei_contig6881.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=183bp MTSLYVHILPGWLLLTLRWYGDSDENGGCGDSGIGLADMGCALLVYLAWQback to top mRNA from alignment at P-wetherbeei_contig6881:1587..2943- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6881.1.1 ID=mRNA_P-wetherbeei_contig6881.1.1|Name=mRNA_P-wetherbeei_contig6881.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1357bp|location=Sequence derived from alignment at P-wetherbeei_contig6881:1587..2943- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6881:1587..2943- >mRNA_P-wetherbeei_contig6881.1.1 ID=mRNA_P-wetherbeei_contig6881.1.1|Name=mRNA_P-wetherbeei_contig6881.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=549bp|location=Sequence derived from alignment at P-wetherbeei_contig6881:1587..2943- (Phaeothamnion wetherbeei SAG_119_79)back to top |