mRNA_P-wetherbeei_contig6774.2.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6774.2.2 vs. uniprot
Match: A0A835ZDM3_9STRA (HSF-type DNA-binding-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDM3_9STRA) HSP 1 Score: 110 bits (274), Expect = 4.770e-25 Identity = 54/87 (62.07%), Postives = 60/87 (68.97%), Query Frame = 3
Query: 306 KRGAPSTFLSHLVDMLQVESPDIIAWTEDGCGFTIFDMERFTNEVCPRHFKHGKFSSFQRQLNLYGFHKMGRTPDAGTYTHPQFRRD 566
KRGAP+ FLS LVD+L+ DIIAW G F I D ERF++EV HFKH K SSFQRQLNLYGF K+ R PDAG Y H F RD
Sbjct: 29 KRGAPALFLSALVDILRGGYEDIIAWNPSGTCFMIRDAERFSDEVLVHHFKHNKLSSFQRQLNLYGFRKISRGPDAGAYAHEHFLRD 115
BLAST of mRNA_P-wetherbeei_contig6774.2.2 vs. uniprot
Match: A0A835Z6Z9_9STRA (HSF-type DNA-binding-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6Z9_9STRA) HSP 1 Score: 100 bits (249), Expect = 5.400e-22 Identity = 44/98 (44.90%), Postives = 63/98 (64.29%), Query Frame = 3
Query: 303 GKRGAPSTFLSHLVDMLQVESPDIIAWTEDGCGFTIFDMERFTNEVCPRHFKHGKFSSFQRQLNLYGFHKMGRTPDAGTYTHPQFRRDNLAEARNIQR 596
GKRGAP F L ++LQ E +++W ++G GF I DM+ F N ++F+H K++SFQRQ NLYGF K+ R PDAG Y H F++ L + ++R
Sbjct: 1 GKRGAPQAFPRRLYELLQEEDASVVSWIKNGEGFIINDMDTFVNTTLVKYFQHNKYTSFQRQCNLYGFRKITRGPDAGMYIHEHFKKGRLEDLVKVRR 98
BLAST of mRNA_P-wetherbeei_contig6774.2.2 vs. uniprot
Match: A0A7S2CXJ7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CXJ7_9STRA) HSP 1 Score: 108 bits (271), Expect = 9.580e-22 Identity = 51/111 (45.95%), Postives = 73/111 (65.77%), Query Frame = 3
Query: 303 GKRGAPSTFLSHLVDMLQVESPDIIAWTEDGCGFTIFDMERFTNEVCPRHFKHGKFSSFQRQLNLYGFHKMGRTPDAGTYTHPQFRRDNLAEARNIQRLMQPRRKDKVPGL 635
G+RGAP F L ++L +ES DII+WTE+G F I +M+ F NE+ ++F+H K+SSFQRQLNLYGF K+ + PD G Y H F RD+ ++ ++R Q + + P L
Sbjct: 77 GRRGAPQVFPRKLYEILTLESSDIISWTENGTSFVIQEMDDFVNEILMKYFRHRKYSSFQRQLNLYGFRKIQKGPDTGAYAHEGFLRDDESQLVKVRRWAQSAGRQQKPTL 187
BLAST of mRNA_P-wetherbeei_contig6774.2.2 vs. uniprot
Match: A0A7S2G7U9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G7U9_9STRA) HSP 1 Score: 101 bits (251), Expect = 5.290e-21 Identity = 47/101 (46.53%), Postives = 61/101 (60.40%), Query Frame = 3
Query: 303 GKRGAPSTFLSHLVDMLQVESPDIIAWTEDGCGFTIFDMERFTNEVCPRHFKHGKFSSFQRQLNLYGFHKMGRTPDAGTYTHPQFRRDNLAEARNIQRLMQ 605
G+RGAP F L ++L E D+I WT G F I +ME F NE+ +F+H K+SSFQRQLNLYGF K+ + PD G Y H F RD ++R+ Q
Sbjct: 99 GRRGAPQVFPRKLYEILTNERSDVIGWTSSGKSFIILEMEIFVNEILMNYFRHQKYSSFQRQLNLYGFRKIQKGPDTGAYAHEHFLRDQPESLTFVRRMPQ 199
BLAST of mRNA_P-wetherbeei_contig6774.2.2 vs. uniprot
Match: A0A6H5KMN3_9PHAE (HSF_DOMAIN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMN3_9PHAE) HSP 1 Score: 104 bits (259), Expect = 5.840e-20 Identity = 46/101 (45.54%), Postives = 65/101 (64.36%), Query Frame = 3
Query: 294 GNAGKRGAPSTFLSHLVDMLQVESPDIIAWTEDGCGFTIFDMERFTNEVCPRHFKHGKFSSFQRQLNLYGFHKMGRTPDAGTYTHPQFRRDNLAEARNIQR 596
G GKRGAP F L ++L ES I+W +G F + D+ERF+ ++ ++++H KFSSFQRQLNLY F K+ + DAG Y HP FRRD + +++R
Sbjct: 32 GRIGKRGAPQAFARKLAEILATESTATISWNANGSAFQVHDVERFSEDILTKYYRHSKFSSFQRQLNLYSFRKIVKGADAGGYAHPMFRRDRPDDLYHVRR 132
BLAST of mRNA_P-wetherbeei_contig6774.2.2 vs. uniprot
Match: A0A6H5JVV9_9PHAE (HSF_DOMAIN domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JVV9_9PHAE) HSP 1 Score: 104 bits (259), Expect = 6.350e-20 Identity = 50/98 (51.02%), Postives = 64/98 (65.31%), Query Frame = 3
Query: 303 GKRGAPSTFLSHLVDMLQVESPDIIAWTEDGCGFTIFDMERFTNEVCPRHFKHGKFSSFQRQLNLYGFHKMGRTPDAGTYTHPQFRRDNLAEARNIQR 596
GKRGAP F S L ++L+ E+PDI+ WT G GF + D R ++EV R FK KFSSFQRQLNLYGF K+ + ++G+Y HP FRR I+R
Sbjct: 54 GKRGAPQAFPSKLYEILEGENPDIVGWTATGRGFEVRDHARLSSEVLGRFFKQDKFSSFQRQLNLYGFRKITKGSESGSYQHPHFRRGERTTLLTIRR 151
BLAST of mRNA_P-wetherbeei_contig6774.2.2 vs. uniprot
Match: A0A7S2BSE7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BSE7_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 7.470e-20 Identity = 45/101 (44.55%), Postives = 61/101 (60.40%), Query Frame = 3
Query: 303 GKRGAPSTFLSHLVDMLQVESPDIIAWTEDGCGFTIFDMERFTNEVCPRHFKHGKFSSFQRQLNLYGFHKMGRTPDAGTYTHPQFRRDNLAEARNIQRLMQ 605
G+RGAP F L ++L E DII WT+ G F I +ME F + ++F+H K+SSFQRQLNLYGF K+ + D G+Y H F RD ++R+ Q
Sbjct: 7 GRRGAPQVFPRKLYEILSTEREDIIGWTDSGKSFIIKEMETFVTNILMKYFRHQKYSSFQRQLNLYGFRKVQKGTDVGSYAHECFIRDQPELLTKVRRIPQ 107
BLAST of mRNA_P-wetherbeei_contig6774.2.2 vs. uniprot
Match: A0A835Z533_9STRA (HSF-type DNA-binding-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z533_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 1.210e-19 Identity = 44/79 (55.70%), Postives = 54/79 (68.35%), Query Frame = 3
Query: 327 FLSHLVDMLQVESPDIIAWTEDGCGFTIFDMERFTNEVCPRHFKHGKFSSFQRQLNLYGFHKMGRTPDAGTYTHPQFRR 563
F L ++L+VE+P++I WT G F I DM RF +V P HFKH KFSSFQRQLNLYGF K+ R +AG Y H F+R
Sbjct: 2 FPHVLYNILEVEAPEVITWTSTGRAFGIQDMPRFRTQVLPTHFKHDKFSSFQRQLNLYGFRKIVRGKEAGGYMHKDFQR 80
BLAST of mRNA_P-wetherbeei_contig6774.2.2 vs. uniprot
Match: A0A7S2R5C8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R5C8_9STRA) HSP 1 Score: 102 bits (253), Expect = 1.530e-19 Identity = 50/101 (49.50%), Postives = 62/101 (61.39%), Query Frame = 3
Query: 303 GKRGAPSTFLSHLVDMLQVESPDIIAWTEDGCGFTIFDMERFTNEVCPRHFKHGKFSSFQRQLNLYGFHKMGRTPDAGTYTHPQFRRDNLAEARNIQRLMQ 605
GKRGAP F L ++L ES D I+WTE G F I DME F V ++F+H KFSSFQRQLNLYGF K+ + + G Y H F RD + R ++R Q
Sbjct: 69 GKRGAPQVFPRKLYEILDNESEDTISWTESGHSFVIKDMETFVTSVLMKYFRHQKFSSFQRQLNLYGFRKISKGTETGAYCHEFFARDQTDKLRLVRRTPQ 169
BLAST of mRNA_P-wetherbeei_contig6774.2.2 vs. uniprot
Match: A0A7R9YBQ9_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBQ9_9STRA) HSP 1 Score: 101 bits (252), Expect = 1.750e-19 Identity = 49/102 (48.04%), Postives = 63/102 (61.76%), Query Frame = 3
Query: 303 GKRGAPSTFLSHLVDMLQVESPDIIAWTEDGCGFTIFDMERFTNEVCPRHFKHGKFSSFQRQLNLYGFHKMGRTPDAGTYTHPQFRRDNLAEARNIQRLMQP 608
GKRGAP F L ++L+ E +I W E+G F I DM+ FT E R+FKH KF+SFQRQLNLYGF K+ + G Y HP F+RD+ ++R QP
Sbjct: 52 GKRGAPQVFPRKLFELLEKEDSAVIRWDEEGECFVIQDMDTFTRESLERYFKHHKFTSFQRQLNLYGFRKIAKGERCGYYVHPHFQRDHPEWLSKVRRTPQP 153 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6774.2.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6774.2.2 >prot_P-wetherbeei_contig6774.2.2 ID=prot_P-wetherbeei_contig6774.2.2|Name=mRNA_P-wetherbeei_contig6774.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=423bp MGDEEARPAGGNAGKRGAPSTFLSHLVDMLQVESPDIIAWTEDGCGFTIFback to top mRNA from alignment at P-wetherbeei_contig6774:633..2526+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6774.2.2 ID=mRNA_P-wetherbeei_contig6774.2.2|Name=mRNA_P-wetherbeei_contig6774.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1894bp|location=Sequence derived from alignment at P-wetherbeei_contig6774:633..2526+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6774:633..2526+ >mRNA_P-wetherbeei_contig6774.2.2 ID=mRNA_P-wetherbeei_contig6774.2.2|Name=mRNA_P-wetherbeei_contig6774.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1269bp|location=Sequence derived from alignment at P-wetherbeei_contig6774:633..2526+ (Phaeothamnion wetherbeei SAG_119_79)back to top |