mRNA_P-wetherbeei_contig6756.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6756.1.2
Unique NamemRNA_P-wetherbeei_contig6756.1.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6756.1.2 vs. uniprot
Match: A0A835Z0R6_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0R6_9STRA)

HSP 1 Score: 311 bits (798), Expect = 1.040e-97
Identity = 201/385 (52.21%), Postives = 259/385 (67.27%), Query Frame = 1
Query:  334 FEAGQLFERF-SDRDGRLSRGDFERLMSAEMSKRSITPPSPPP------PLTTHGSDQPPLPAAASRDPFDPASSHSGAGAGVNRQQGSDNAA--------YRLSGAAMGPPLTHYNETTGVPLPREAMTTEASLGHTVVPLHEAYSRRLSRLQALVSSRLMPAREQLLQLRRRLHARADEVKAARAAVERETAADAGAVVERLRSAEALKLATLAQRAADVSAELIAMDRIAEQMAGAMALANTGGPGGLSLSAAAGGGPSGPAARYAHEFEAAHRMVELVQSYPELCAAIEKSANRPVDWEISVTADDFPRETAERLEVLRRADRYEQALAVKDQVVWTLLQETQGLEHRVEAEQNLAREYAAEAAEWAALTERLTAELAAAR 1443
            FE GQLFERF SD+DGRL+R +FE+LM+  + ++    P P        P    GS  PP P    R        H  A A   R      AA        Y +   A+  PLTHYNET GVPL ++A+  + +LGHTVVPLHEAYSRRL+RLQALV+S+L+PAREQLLQLRRRL AR +EV++A+AA+ERET ADA  ++ERLRSAEALK+ATL QR +DV+ EL  +DR+A+Q+AGA      G            GG +G A RY HEFE+  +M+ELVQSY +LCA++E++A+R  D  I+VT +DFP+ETAERLEVLRRADRYE+ALA+KDQ++W L+QE   +  +  AE  L++EYA E AEW  LT RLTA+++  R
Sbjct:   48 FEIGQLFERFDSDKDGRLTRAEFEKLMNLRVQQQRQQAPDPDQYSAATAPTRLPGSPSPPRPPHHQRQ------RHMAADAPNMRWSQPAPAASAAAPSYGYPILPGAL--PLTHYNETAGVPLRKDAVEEQVALGHTVVPLHEAYSRRLARLQALVTSKLLPAREQLLQLRRRLLARGEEVQSAKAAIERETMADAHTILERLRSAEALKMATLEQRMSDVATELEQLDRLAQQVAGAAGTQEQG------------GGMAG-AERYTHEFESTAKMIELVQSYGDLCASVERAASRLQDTSIAVTPNDFPQETAERLEVLRRADRYEKALAIKDQMIWNLMQEASHVVEKATAEAVLSKEYANEMAEWVDLTNRLTAQISELR 411          
BLAST of mRNA_P-wetherbeei_contig6756.1.2 vs. uniprot
Match: D7FKD4_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKD4_ECTSI)

HSP 1 Score: 275 bits (703), Expect = 2.250e-84
Identity = 181/364 (49.73%), Postives = 232/364 (63.74%), Query Frame = 1
Query:  334 FEAGQLFERF-SDRDGRLSRGDFERLMSAEMSKRSITPPSPPPPLTTHGSDQPPLPAAASRDPFDPASSHSGAGAGVNRQQGSDNAAYRLSGAAMGPPLTHYNETTGVPLPREAMTTEASLGHTVVPLHEAYSRRLSRLQALVSSRLMPAREQLLQLRRRLHARADEVKAARAAVERETAADAGAVVERLRSAEALKLATLAQRAADVSAELIAMDRIAEQMAGAMALANTGGPGGLSLSAAAGGGPSGPAARYAHEFEAAHRMVELVQSYPELCAAIEKSANRPVDWEISVTADDFPRETAERLEVLRRADRYEQALAVKDQVVWTLLQETQGLEHRVEAEQNLAREYAAEAAEWAALTERLT 1422
            FE GQLF++F +D DGRL R DFER++   + +               G D        +R                             S   +GP +THY+ETTGVPL REA+ ++ +LGHTVVPL EAYSRRLSRLQ+L SSRLMP RE+LLQLRRRLH R +E+ AARAA+ERET ADA A+VERLRSAE LK ATLAQ    V+AEL  ++++++Q+A    L ++  PG +S           P+A  A +FE   RMVELVQSY ELC +I++ AN+P D  I V ADDF  ETAERLEVLRRADRYE AL+VKDQ++W  +QE+Q LE + + E++L +E+A EA EW  LTE+L+
Sbjct:    7 FEFGQLFQKFDTDGDGRLGRADFERMVGGMLEQ-----------FGERGED-------GTRRGXXXXXXXXXXXXXXXXXXXXXXXXXXXS--PVGPSITHYDETTGVPLAREAVASQQALGHTVVPLREAYSRRLSRLQSLASSRLMPVRERLLQLRRRLHGRGEELTAARAAIERETLADAEAIVERLRSAETLKQATLAQGVNSVTAELEGVEKLSDQVARVTLLPSST-PGSMS-----------PSAACAPDFEGTERMVELVQSYRELCNSIDRVANKPFDPSIDVQADDFSHETAERLEVLRRADRYEHALSVKDQMLWEAMQESQRLEEKCQEERSLGQEFAEEAQEWVTLTEKLS 338          
BLAST of mRNA_P-wetherbeei_contig6756.1.2 vs. uniprot
Match: A0A6H5JBH8_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBH8_9PHAE)

HSP 1 Score: 229 bits (584), Expect = 3.460e-66
Identity = 179/465 (38.49%), Postives = 235/465 (50.54%), Query Frame = 1
Query:  175 VDAKEFQRLWRDR---------IQRGPLGASAAXXXXXXXXXQSGALSGATTSGAPLPAHLTFEAGQLFERF-SDRDGRLSRGDFERLMSAEMSKRSITPPSPPPPLTTHGSDQPPLPAAASRDPFDPASSHSGAGAGVNRQQGSDNAAYR-------LSGAAMGPPLTHYNETTGVPLPREAMTTEASLGHTVVPLHEAYSRRLSRLQALVSSRLMPAREQLLQLRRRLHARADEVKAARAAVERETAADAGAVVERLRSAEALKLATLAQRAADVSAELIAMDRIAEQMAGAMALANTGGPGGLSLSAAAGGGPSGPAARYAHEFEAAHRMVELVQSYPELCAAIEKSANRPVDWEISVTADDFPRETAERLEVLRRADRYEQALAVKDQVVWTLLQ--------------------------------ETQGLEHRVEAEQNLAREYAAEAAEWAALTERLT 1422
            VDAK+FQR+WR+R            G +G             + G        G  +     FE G+LF++F +D DGRL R DFERL+   + +           +   G D                 +  G+  G      + +AA +             GP +THY+ETTGVPL REA+ ++ +LGHTVVPL EAYSRRLSRLQ                LRRRLH R +E++AARAA+ERET ADA A+VERLRSAE LK A L Q    V+AEL  ++++++Q A  +          + L  A              +FE   RMVELVQSY ELC +I++ AN+P D  I V ADDFP ETAERLEVLRRADRYE AL+VKDQ++W  +Q                                E+Q LE + + E++L RE+A EA EW  LT +L+
Sbjct:   14 VDAKDFQRVWREREHLFSEPDPAPGGDVGGREEASRPGGEARREGRRE---EGGGGVGPEKIFEFGKLFQKFDTDGDGRLGRADFERLVGGMLEQ-----------VGERGGD----------------GTRRGSRGGEXDNGNAPSAAPQPLPXXXXXXXXXAGPSITHYDETTGVPLAREAVASQQALGHTVVPLREAYSRRLSRLQ----------------LRRRLHGRGEELRAARAAIERETLADAEAIVERLRSAETLKQAMLTQGVNSVTAELEGVEKLSDQTACRVL---------MDLVCAT-------------DFEGTERMVELVQSYRELCNSIDRVANKPFDPTIDVQADDFPHETAERLEVLRRADRYEHALSVKDQMLWEAMQVSDCRLQSSEMLADKVASEVSPVVSLTTALSSESQRLEEKCQEERSLGREFAEEAQEWVTLTGKLS 410          
BLAST of mRNA_P-wetherbeei_contig6756.1.2 vs. uniprot
Match: A0A7S3MHC0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MHC0_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 6.780e-17
Identity = 49/124 (39.52%), Postives = 79/124 (63.71%), Query Frame = 1
Query:  625 LTHYNETTGVPLPREAMTTEASLGHTVVPLHEAYSRRLSRLQALVSSRLMPAREQLLQLRRRLHARADEVKAARAAVERETAADAGAVVERLRSAEALKLATLAQRAADVSAELIAMDRIAEQM 996
            LTHY+ET GV + R  +    S+GH +VPL +AY  R  +L+A+++ RL+P RE LLQLRR+L   ++EV A +  +E+ET  D   ++ RL SAE+ + A +  +   +  EL  ++RI +++
Sbjct:   72 LTHYDETAGVAIARYDVDQNKSMGHIIVPLTDAYKSRYEKLRAILTGRLLPKREHLLQLRRKLQKASEEVHAKKENIEKETRTDTDQILRRLDSAESFRQAAILSQVMKIDEELQGIERIVKRV 195          
BLAST of mRNA_P-wetherbeei_contig6756.1.2 vs. uniprot
Match: A0A2K3DR50_CHLRE (Uncharacterized protein n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3DR50_CHLRE)

HSP 1 Score: 92.8 bits (229), Expect = 2.800e-16
Identity = 83/240 (34.58%), Postives = 123/240 (51.25%), Query Frame = 1
Query:  634 YNETTG-VPLPREAMTTE-ASLGHTVVPLHEAYSRRLSRLQALVSSRLMPAREQLLQLRRRLHARADEVKAARAAVERETAADAGAVVERLRSAEALKLATLAQRAADVSAELIAMDRIAEQMAGAMALANTGGPGGLSLSAAAGGGPSGPAARYAHEFEAAHRMVELVQSYPELCAAIEKSANRPVDWEISVTADDFPRETAERLEVLRRADRYEQALAVKDQVVWTLLQETQGLEHRV 1347
            Y++TT  V    + M  E A  GH ++PL +AY  +L+ LQA V+ +L+  RE LLQ   RL ARA EV AARA +ER+ AA A  ++ ++RSAE+LK A L +  A+V A+L A+ R+   +              +S SAA      GPA              + + +Y  L  A ++   RP   E+ V ADD P E     ++        + LAVKDQ++  LLQE + ++  +
Sbjct:  331 YDDTTQEVVYADDVMARELAKQGHALLPLGDAYRGKLAALQAAVNGQLLAKREALLQQHARLAARAGEVAAARAGLERDVAALAEDMLGKVRSAESLKQALLGREQAEVDAQLDAIGRLLNDI--------------VSASAA------GPA--------------DFLNAYRRLADACDRLVARPFKSEVDVAADDLPSEAGVYRQLAEAHGALAKLLAVKDQMIAHLLQEREAMQEEL 536          
BLAST of mRNA_P-wetherbeei_contig6756.1.2 vs. uniprot
Match: A0A7S1C795_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C795_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 3.520e-16
Identity = 69/183 (37.70%), Postives = 95/183 (51.91%), Query Frame = 1
Query:  718 EAYSRRLSRLQALVSSRLMPAREQLLQLRRRLHARADEVKAARAAVERETAADAGAVVERLRSAEALKLATLAQRAADVSAELIAMDRIAEQMAGAMALANTGGPGGLSLSAAAGGGPSGPAARYAHEFEAAHRMVELVQSYPELCAAIEKSANRPVDWEISVTADDFPRETAERLEVLRRAD 1266
            EAY  +L  L A VS+ LM  RE+++Q    + ARA+EVKAAR A+ERET AD  A++ RLRSAEA KL+ L+   +++  ++ A+D    Q A   A    GG GG+                              +Q +PEL A  ++ A +PV   + V ADDF RE   R E  RRA+
Sbjct:   11 EAYRAKLGSL-ASVSATLMAKRERIVQQALSVQARAEEVKAARRAIERETTADTEAILHRLRSAEAFKLSLLSHDLSELQVDIAAIDAFQAQFA--QAHPQQGGGGGMXX------------------XXXXXASAAFLQKFPELAAEADRLAAKPVKLSVDVRADDFDREVFRRNEAARRAE 172          
BLAST of mRNA_P-wetherbeei_contig6756.1.2 vs. uniprot
Match: A0A7R9UFR6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UFR6_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 3.250e-15
Identity = 59/136 (43.38%), Postives = 86/136 (63.24%), Query Frame = 1
Query:  781 REQLLQLRRRLHARADEVKAARAAVERETAADAGAVVERLRSAEALKLATLAQRAADVSAELIAMDRIAEQMAGAMALANTGGPGGLSLSAAAGGGPSGPAARYAHEFEAAHRMVELVQSYPELCAAIEKSANRPV 1188
            REQL+ L RR  +R D+++A RAAVER T  D  ++VERLRSAEALKL+TL  + +++ A+L A+DR+ EQ+ GA    ++GG G   +    GG   GP              +E++Q +PELCA I++ ++RPV
Sbjct:    2 REQLMNLLRRTRSRMDDIRARRAAVERTTMQDVESIVERLRSAEALKLSTLGGQLSELQADLEAIDRVTEQVEGAR---SSGGVGTGVVDV--GGHDLGPLG-----------SLEIIQMFPELCATIDRLSSRPV 121          
BLAST of mRNA_P-wetherbeei_contig6756.1.2 vs. uniprot
Match: A0A835T3Y5_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835T3Y5_9CHLO)

HSP 1 Score: 89.0 bits (219), Expect = 4.860e-15
Identity = 81/240 (33.75%), Postives = 120/240 (50.00%), Query Frame = 1
Query:  634 YNETTG-VPLPREAMTTE-ASLGHTVVPLHEAYSRRLSRLQALVSSRLMPAREQLLQLRRRLHARADEVKAARAAVERETAADAGAVVERLRSAEALKLATLAQRAADVSAELIAMDRIAEQMAGAMALANTGGPGGLSLSAAAGGGPSGPAARYAHEFEAAHRMVELVQSYPELCAAIEKSANRPVDWEISVTADDFPRETAERLEVLRRADRYEQALAVKDQVVWTLLQETQGLEHRV 1347
            Y++TT  V    + M  E A  GH ++PL +AY  +L+ LQA V+ +L+  RE LLQ   RL ARA EV AARA +ERE +A A  ++ ++RSAE+LK A L +  A+V  +L A+ R+   +              +S SAA      GP              V+ + +Y  L    ++   RP   E+ V ADD P E     ++        + LAVKDQ++  LLQE   ++  +
Sbjct:  338 YDDTTQEVVYADDVMARELAKQGHALLPLGDAYRGKLAALQAAVNGQLLAKREALLQQHARLAARAGEVAAARAGLEREVSALAEDMLGKVRSAESLKQALLGREQAEVDGQLDAIGRLLTDV--------------VSASAA------GP--------------VDFLNAYRRLADTCDRLVARPFKSEVDVAADDLPAEAGVYRQLAEAHGALAKLLAVKDQMIAHLLQERDAMQEEL 543          
BLAST of mRNA_P-wetherbeei_contig6756.1.2 vs. uniprot
Match: A0A835SKQ4_CHLIN (Uncharacterized protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835SKQ4_CHLIN)

HSP 1 Score: 87.0 bits (214), Expect = 9.450e-15
Identity = 93/293 (31.74%), Postives = 141/293 (48.12%), Query Frame = 1
Query:  499 AAASRDPFDPASSHSGAGAGVNRQ----QGSDNAAYRLSGAAMGP---PLTH-YNETTG-VPLPREAMTTE-ASLGHTVVPLHEAYSRRLSRLQALVSSRLMPAREQLLQLRRRLHARADEVKAARAAVERETAADAGAVVERLRSAEALKLATLAQRAADVSAELIAMDRIAEQMAGAMALANTGGPGGLSLSAAAGGGPSGPAARYAHEFEAAHRMVELVQSYPELCAAIEKSANRPVDWEISVTADDFPRETAERLEVLRRADRYEQALAVKDQVVWTLLQETQGLEHRV 1347
            A+A  DP    S  SGA A  + Q        ++A + +G  +GP   PL+  Y++TT  V    + M  E    GH ++PL +AY  +L+ LQA V+ +L+  RE LLQ   RL ARA EV AARA +ERE  A A  ++ ++RSAE+LK A L +  A+V  +L A+ R+  ++  A A                    +GP              V+ + +Y  +    ++   RP   E+ V ADD P E     ++        + LAVKDQ++  LLQE   ++  +
Sbjct:   94 ASALLDPMHALSLQSGAAAHQHPQLLQLPPVPHSALQPNGVMLGPGGQPLSLLYDDTTQEVVYADDVMARELGKQGHALLPLGDAYRGKLAALQAAVNGQLLAKREALLQQHARLAARAGEVAAARAGLEREVTALAEDMLGKVRSAESLKQALLGRDQAEVDGQLDAIGRLLGEVVAASA--------------------AGP--------------VDFLNAYRRMADTCDRLVARPFKSEVDVAADDLPAEAGVYRQLAEAHGALAKLLAVKDQMISHLLQERDAMQEEL 352          
BLAST of mRNA_P-wetherbeei_contig6756.1.2 vs. uniprot
Match: A0A8J4CWX4_9CHLO (Uncharacterized protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4CWX4_9CHLO)

HSP 1 Score: 83.2 bits (204), Expect = 3.370e-13
Identity = 78/236 (33.05%), Postives = 111/236 (47.03%), Query Frame = 1
Query:  634 YNETTG-VPLPREAMTTE-ASLGHTVVPLHEAYSRRLSRLQALVSSRLMPAREQLLQLRRRLHARADEVKAARAAVERETAADAGAVVERLRSAEALKLATLAQRAADVSAELIAMDRIAEQMAGAMALANTGGPGGLSLSAAAGGGPSGPAARYAHEFEAAHRMVELVQSYPELCAAIEKSANRPVDWEISVTADDFPRETAERLEVLRRADRYEQALAVKDQVVWTLLQETQGL 1335
            Y+ET   V L    M  E A  GH + PL +AY  +L+ LQA V+  L+  RE L+Q   RL ARA EV A RAA+ERE A     +V R+R AE+LK + LA+  +DV A+L A+ R+   +  A A                    +GP              V+ + +Y  L     +  ++P    + V  DD P E A   ++    +   Q L VKDQ++  LL+E   L
Sbjct:  329 YDETMQEVVLADAVMVKELAKQGHGLAPLADAYRTKLAALQAAVNGPLLAKREALMQQHARLAARAGEVAAQRAALEREVAVLTEDMVGRIRGAESLKQSVLAREQSDVGAQLDAIQRLLGDIMAASA--------------------AGP--------------VDFLNAYSRLTDTCHRLVSKPFKQVVDVAVDDLPAEAAVYRDLAASHEALTQLLGVKDQMISHLLKERDAL 530          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6756.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A835Z0R6_9STRA1.040e-9752.21EF-hand domain-containing protein n=1 Tax=Tribonem... [more]
D7FKD4_ECTSI2.250e-8449.73EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5JBH8_9PHAE3.460e-6638.49EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A7S3MHC0_9STRA6.780e-1739.52Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A2K3DR50_CHLRE2.800e-1634.58Uncharacterized protein n=1 Tax=Chlamydomonas rein... [more]
A0A7S1C795_9STRA3.520e-1637.70Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7R9UFR6_9STRA3.250e-1543.38Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A835T3Y5_9CHLO4.860e-1533.75Uncharacterized protein n=1 Tax=Chlamydomonas schl... [more]
A0A835SKQ4_CHLIN9.450e-1531.74Uncharacterized protein n=1 Tax=Chlamydomonas ince... [more]
A0A8J4CWX4_9CHLO3.370e-1333.05Uncharacterized protein n=1 Tax=Volvox reticulifer... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6756contigP-wetherbeei_contig6756:2..3073 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FKD4
PFAMszf-B_box
Model size1542
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons5
Evalue3.68e-85
EggNOG OGs2DZTU@1|root,2S7AK@2759|Eukaryota
Ec32 ortholog descriptionEF-hand domain pair
Ec32 orthologEc-05_005780.1
Cds size1542
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186934.9998722-CDS-P-wetherbeei_contig6756:1..2441683186934.9998722-CDS-P-wetherbeei_contig6756:1..244Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6756 2..244 -
1683186935.011587-CDS-P-wetherbeei_contig6756:527..5481683186935.011587-CDS-P-wetherbeei_contig6756:527..548Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6756 528..548 -
1683186935.0218353-CDS-P-wetherbeei_contig6756:1134..14191683186935.0218353-CDS-P-wetherbeei_contig6756:1134..1419Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6756 1135..1419 -
1683186935.0321126-CDS-P-wetherbeei_contig6756:1857..21191683186935.0321126-CDS-P-wetherbeei_contig6756:1857..2119Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6756 1858..2119 -
1683186935.0421364-CDS-P-wetherbeei_contig6756:2342..30731683186935.0421364-CDS-P-wetherbeei_contig6756:2342..3073Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6756 2343..3073 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6756.1.2prot_P-wetherbeei_contig6756.1.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6756 2..3073 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6756.1.2

>prot_P-wetherbeei_contig6756.1.2 ID=prot_P-wetherbeei_contig6756.1.2|Name=mRNA_P-wetherbeei_contig6756.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=514bp
ATAKRSSSRRSRSAEDGNGASPISNGKANGGSSSSGTEPSPDFEAGLLFE
RYAHGANAVDAKEFQRLWRDRIQRGPLGASAAAAAAAAAAGQSGALSGAT
TSGAPLPAHLTFEAGQLFERFSDRDGRLSRGDFERLMSAEMSKRSITPPS
PPPPLTTHGSDQPPLPAAASRDPFDPASSHSGAGAGVNRQQGSDNAAYRL
SGAAMGPPLTHYNETTGVPLPREAMTTEASLGHTVVPLHEAYSRRLSRLQ
ALVSSRLMPAREQLLQLRRRLHARADEVKAARAAVERETAADAGAVVERL
RSAEALKLATLAQRAADVSAELIAMDRIAEQMAGAMALANTGGPGGLSLS
AAAGGGPSGPAARYAHEFEAAHRMVELVQSYPELCAAIEKSANRPVDWEI
SVTADDFPRETAERLEVLRRADRYEQALAVKDQVVWTLLQETQGLEHRVE
AEQNLAREYAAEAAEWAALTERLTAELAAAREAAAAAAAAAAAAQRRAAE
QTAAERRQAQVLRA
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mRNA from alignment at P-wetherbeei_contig6756:2..3073-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6756.1.2 ID=mRNA_P-wetherbeei_contig6756.1.2|Name=mRNA_P-wetherbeei_contig6756.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3072bp|location=Sequence derived from alignment at P-wetherbeei_contig6756:2..3073- (Phaeothamnion wetherbeei SAG_119_79)
GCTACTGCCAAAAGATCATCCTCTAGGCGATCCCGTTCTGCCGAGGACGG CAACGGGGCGTCGCCCATATCGAATGGGAAAGCGAATGGTGGGTCGTCTT CCTCGGGCACGGAACCCAGCCCCGATTTTGAAGCAGGCCTCCTTTTTGAA CGTTACGCACATGGCGCCAATGCCGTGGACGCCAAGGAATTCCAGCGTCT TTGGCGAGATCGCATCCAACGCGGCCCCCTAGGTGCATCCGCCGCCGCCG CTGCCGCCGCCGCTGCAGCGGGGCAAAGTGGTGCTCTATCCGGAGCAACA ACGAGTGGTGCGCCGCTGCCAGCGCACCTCACGTTCGAGGCCGGCCAGCT CTTCGAACGTTTCAGCGACAGGGACGGGCGCTTGAGCCGCGGCGACTTTG AGCGCCTGATGTCCGCCGAAATGTCTAAGCGCAGCATTACTCCGCCGTCG CCGCCGCCGCCACTGACGACGCACGGTTCTGACCAGCCGCCCCTGCCGGC GGCGGCCTCAAGGGACCCATTCGACCCCGCGTCGTCGCATTCGGGTGCCG GCGCCGGCGTCAACCGGCAGCAAGGAAGTGACAACGCGGCGTACCGGCTC AGCGGTGCGGCGATGGGGCCGCCACTGACGCACTATAACGAGACGACGGG CGTGCCGCTGCCGCGGGAGGCGATGACAACGGAGGCATCGCTCGGGCACA CCGTTGTTCCCCTCCACGAGGCCTACAGCAGGTGCGAGAAGAAGGATCCA TTTTCAATTTTTTCAATCAGTTTTCGCGGAATTCGCAGTTACTTTCCGTT TCTATTAAAATTATGGGAATTGATTGTTGCCTCGGATTCCTGCAATAATG GATCCTCCAATCCAATTATGGCCGATTCCAGCACCGTGCTGCCACTGCAG ATGGCCCCTCCCAGACCCCTCCGTTTCCCACCATGCGATGGTTCCTCTCT CCAGGCGCCTTTCGCGGCTGCAGGCGCTCGTCTCCAGCCGCCTGATGCCC GCACGCGAGCAGCTGCTGCAGCTGCGGCGGCGGCTGCACGCTCGTGCCGA TGAGGTGAAGGCGGCGCGGGCGGCTGTGGAGCGCGAGACAGCGGCCGACG CCGGCGCCGTCGTGGAGCGGCTGCGGTCTGCGGAGGCGCTCAAGCTGGCG ACGCTGGCGCAGCGCGCAGCGGACGTGTCGGCGGAGCTCATCGCCATGGA CCGCATCGCCGAGCAGGTGCATAATTCCGGTCTGGTTTCTCGGAATGTTC TTTTTTTTACTAAAAACTGCGGAAAGAAAGTTGCTGGAGCGCTTTTTCTC TTTCTGTCGTTCGAAATGACGCCTGATTAGAGTCTCTTTTGTGCCGCGTT AGCCTGAGGCCAATCCAGGGCCGACGCAAAAGTAAGAGGGCGCGGGCTCC TTTTTTTGGTAATTCAAAGCGGCCTCTCAAATTGCTACGGGCGATAATGT TGAAGGTGGGGCCGTGCGGCTCTTTGAGGTGCCAGGAAGAGTATGCTTTC CAAAACAAGTTTCGAAAGTAATCTATGGTTTCGCTTTGTTCTCCTTTTTG TACATTTGACAGCCACAAACACGCCGTTCGGCCACCGCGGTGCCCCCTCC GACTTTGACGAAAGCTTTTTTTGAATTTCATTCGTTTCCGCTTCTCTCTC ACAGATGGCGGGCGCCATGGCGCTGGCCAACACCGGTGGCCCCGGCGGCC TCAGCCTGTCCGCCGCCGCCGGCGGCGGCCCCAGCGGCCCCGCCGCGCGC TACGCCCACGAATTCGAGGCCGCGCATCGCATGGTGGAGCTCGTGCAGAG CTATCCGGAGCTGTGCGCGGCGATCGAGAAGTCAGCGAACCGTCCGGTAG ACTGGGAGATTTCTGTAACGGCGGACGACTTTCCCAGGGAGACGGCGGAG CGGCTGGAGGTGCTTCGGCGGGCCGACCGCTACGAACAGGTGCGAAGAAG GTCCGGTAGATGCGAGAAGAGGGGTTGGAAACGTTTGACTGTGAATGGGG ATCGCGGCCGTTTCCTTCTCTTTCTGCGGAATTTGGGGGGAGGGGTCCGG CCGGGGGGGGTCGACGTGCATGTCTGAAGTTGGCGTTGCTCTCTGAGAGG GAGGAGTTGAGGCGAAGCGATTGATGGCGGCTAAGGCGGCAACCGCATAA ACTGCAGATTGGTTCGAGATTGTGTGGCGTGCACGCTTTGCCCTTCCCAT TTTCAGCAGCTCGGCCTGTCAAGCGCTGCGAGATGCGGAAATTCCAAAAT CCTGGCCGCTTGCAGCTCTGGTCTTTCACTCAAATAGCGTTGGGCGTTTT CCCGGAAAGTATCCCCTGTTTTTCCGGCGCGGCTGCGTCCTGGCCTGGCG CGGCGCTGACGCGGTTCCGTCTGTCGCGGCGACCCCCGCCTCGCCGTGCC CCCTTTCCCACGTCGCCCGCATGCGGCGCTTCGTCGCTGCTGAGCGCTGC TTGGTCGTCGGGCGCTGCCGAACGGTTGCTGGACAACTCCGGACGTCGTA TTGGGCATTTCGGGCCCGATCGTAGGCGCTGGCGGTGAAGGATCAGGTGA GGAGCTGTCACCTGCTGCCATGAGATCAGTGTACCTCAGTTTTCAGGCTT CGTGAAACCAGCTGAAATACAGTGTCAAGGCTCCAGTCGTAAACATTTCT CTTCCTGTTTCTTCAATGGTACGTTTTCGGGATGGGCTTATTTCGTGAAC TGAACCTTGTATGGAGACGTTCGGCGTGGGTTCCTAATTGACAGCCGTTG TGGCCGGCCTGCAAGGTGGACCGTCTTGGACTCCTGCAGGGTTTTGCTCA TCCTTCTCCTTCCCCTCACAAATCTGCAGGTGGTGTGGACGTTGCTGCAG GAGACGCAGGGGCTGGAGCATCGCGTGGAGGCAGAGCAGAATCTGGCCCG CGAATACGCCGCAGAGGCGGCGGAGTGGGCTGCCCTAACAGAGCGGCTGA CGGCAGAGCTGGCTGCGGCGCGGGAGGCGGCGGCGGCGGCCGCCGCAGCC GCGGCGGCGGCGCAGCGGCGGGCGGCCGAGCAGACCGCGGCAGAGCGGCG GCAGGCACAGGTGCTGCGCGCG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6756:2..3073-

>mRNA_P-wetherbeei_contig6756.1.2 ID=mRNA_P-wetherbeei_contig6756.1.2|Name=mRNA_P-wetherbeei_contig6756.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1542bp|location=Sequence derived from alignment at P-wetherbeei_contig6756:2..3073- (Phaeothamnion wetherbeei SAG_119_79)
GCTACTGCCAAAAGATCATCCTCTAGGCGATCCCGTTCTGCCGAGGACGG
CAACGGGGCGTCGCCCATATCGAATGGGAAAGCGAATGGTGGGTCGTCTT
CCTCGGGCACGGAACCCAGCCCCGATTTTGAAGCAGGCCTCCTTTTTGAA
CGTTACGCACATGGCGCCAATGCCGTGGACGCCAAGGAATTCCAGCGTCT
TTGGCGAGATCGCATCCAACGCGGCCCCCTAGGTGCATCCGCCGCCGCCG
CTGCCGCCGCCGCTGCAGCGGGGCAAAGTGGTGCTCTATCCGGAGCAACA
ACGAGTGGTGCGCCGCTGCCAGCGCACCTCACGTTCGAGGCCGGCCAGCT
CTTCGAACGTTTCAGCGACAGGGACGGGCGCTTGAGCCGCGGCGACTTTG
AGCGCCTGATGTCCGCCGAAATGTCTAAGCGCAGCATTACTCCGCCGTCG
CCGCCGCCGCCACTGACGACGCACGGTTCTGACCAGCCGCCCCTGCCGGC
GGCGGCCTCAAGGGACCCATTCGACCCCGCGTCGTCGCATTCGGGTGCCG
GCGCCGGCGTCAACCGGCAGCAAGGAAGTGACAACGCGGCGTACCGGCTC
AGCGGTGCGGCGATGGGGCCGCCACTGACGCACTATAACGAGACGACGGG
CGTGCCGCTGCCGCGGGAGGCGATGACAACGGAGGCATCGCTCGGGCACA
CCGTTGTTCCCCTCCACGAGGCCTACAGCAGGCGCCTTTCGCGGCTGCAG
GCGCTCGTCTCCAGCCGCCTGATGCCCGCACGCGAGCAGCTGCTGCAGCT
GCGGCGGCGGCTGCACGCTCGTGCCGATGAGGTGAAGGCGGCGCGGGCGG
CTGTGGAGCGCGAGACAGCGGCCGACGCCGGCGCCGTCGTGGAGCGGCTG
CGGTCTGCGGAGGCGCTCAAGCTGGCGACGCTGGCGCAGCGCGCAGCGGA
CGTGTCGGCGGAGCTCATCGCCATGGACCGCATCGCCGAGCAGATGGCGG
GCGCCATGGCGCTGGCCAACACCGGTGGCCCCGGCGGCCTCAGCCTGTCC
GCCGCCGCCGGCGGCGGCCCCAGCGGCCCCGCCGCGCGCTACGCCCACGA
ATTCGAGGCCGCGCATCGCATGGTGGAGCTCGTGCAGAGCTATCCGGAGC
TGTGCGCGGCGATCGAGAAGTCAGCGAACCGTCCGGTAGACTGGGAGATT
TCTGTAACGGCGGACGACTTTCCCAGGGAGACGGCGGAGCGGCTGGAGGT
GCTTCGGCGGGCCGACCGCTACGAACAGGCGCTGGCGGTGAAGGATCAGG
TGGTGTGGACGTTGCTGCAGGAGACGCAGGGGCTGGAGCATCGCGTGGAG
GCAGAGCAGAATCTGGCCCGCGAATACGCCGCAGAGGCGGCGGAGTGGGC
TGCCCTAACAGAGCGGCTGACGGCAGAGCTGGCTGCGGCGCGGGAGGCGG
CGGCGGCGGCCGCCGCAGCCGCGGCGGCGGCGCAGCGGCGGGCGGCCGAG
CAGACCGCGGCAGAGCGGCGGCAGGCACAGGTGCTGCGCGCG
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