mRNA_P-wetherbeei_contig6560.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6560.1.1 vs. uniprot
Match: UPI0019A61D57 (SDR family oxidoreductase n=1 Tax=Candidatus Parcubacteria bacterium TaxID=2762014 RepID=UPI0019A61D57) HSP 1 Score: 387 bits (993), Expect = 6.960e-134 Identity = 198/252 (78.57%), Postives = 219/252 (86.90%), Query Frame = 1
Query: 19 SLFDLTGQVAIVTGSTRGIGKSIAEELGRAGAKVMISSRKADACEATRAELAGMGLTVLAQPCNVGRKEEVTALVEATDKAWGRVDIMVCNAAINPYYGPLGGLPDETFDKVMSSNVKSNLWLANLVAPGMAERGGGSIIMVGSIAGLKANTIIGAYGISKAADHMLVKNLAAEWGPKNVRVNAIAPGLVKTDFAKALWEDDKLRAAREAATPLRRIGEPRDIGGIAVFLASQAAAFMTGQCIVADGGVTIV 774
SLFDL+G+VAIVTGSTRGIGKS+AEEL RAGA+V+ISSRKA+ACEA RAE GL VLAQPCNV RKEE+ ALV+A WGRVDI + NAA+NPYYGPL +PD+ FDKV +NVKS LWLA+L PGMA RGGGS I VGSI G+ ANT+IGAYG+SKAADH LV+NLAAEWGPKNVRVNAIAPGLVKTDFAKALWEDDK RA REAATPLRR+G PRDIGGIAVFLAS+AAAFMTGQ IVADGGVTI+
Sbjct: 4 SLFDLSGKVAIVTGSTRGIGKSMAEELARAGARVVISSRKAEACEAVRAEFEAQGLEVLAQPCNVSRKEELKALVDAAVAKWGRVDIAIANAAVNPYYGPLTEIPDDAFDKVFLNNVKSVLWLASLTLPGMAGRGGGSFITVGSIGGIIANTVIGAYGMSKAADHHLVRNLAAEWGPKNVRVNAIAPGLVKTDFAKALWEDDKRRAEREAATPLRRLGVPRDIGGIAVFLASEAAAFMTGQVIVADGGVTIL 255
BLAST of mRNA_P-wetherbeei_contig6560.1.1 vs. uniprot
Match: A0A521W201_9PROT (SDR family oxidoreductase n=3 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A521W201_9PROT) HSP 1 Score: 375 bits (963), Expect = 2.570e-129 Identity = 186/252 (73.81%), Postives = 215/252 (85.32%), Query Frame = 1
Query: 19 SLFDLTGQVAIVTGSTRGIGKSIAEELGRAGAKVMISSRKADACEATRAELAGMGLTVLAQPCNVGRKEEVTALVEATDKAWGRVDIMVCNAAINPYYGPLGGLPDETFDKVMSSNVKSNLWLANLVAPGMAERGGGSIIMVGSIAGLKANTIIGAYGISKAADHMLVKNLAAEWGPKNVRVNAIAPGLVKTDFAKALWEDDKLRAAREAATPLRRIGEPRDIGGIAVFLASQAAAFMTGQCIVADGGVTIV 774
+LFDL+G+VA+VTGST+GIGKS AEE+ RAGA+V+ISSRKA AC+A RAE A G +A+PCNV RKEE+ ALVE T WGR+DI+V NAA NPYYGPL GLPD+TFDKVM +NVKS LWLANL PGMAERGGGS +++GSIAGL ANT+IG YGISKAAD LV+NLAAEWGPKNVRVNAIAPGL+KTDFA+ALWEDD+ R REA TPLRR+GE R+IGGI FLAS AA+F+TGQ +VADGGVTIV
Sbjct: 4 TLFDLSGKVALVTGSTKGIGKSAAEEMARAGARVVISSRKAQACDAVRAEFAAQGWPAIARPCNVSRKEELQALVELTLATWGRIDIVVANAAANPYYGPLSGLPDDTFDKVMLNNVKSTLWLANLTLPGMAERGGGSFVVIGSIAGLLANTVIGIYGISKAADFQLVRNLAAEWGPKNVRVNAIAPGLIKTDFARALWEDDRRRKEREALTPLRRLGEAREIGGIVAFLASDAASFITGQTLVADGGVTIV 255
BLAST of mRNA_P-wetherbeei_contig6560.1.1 vs. uniprot
Match: A0A0S8B279_9PROT (Short-chain dehydrogenase n=1 Tax=Betaproteobacteria bacterium SG8_39 TaxID=1703390 RepID=A0A0S8B279_9PROT) HSP 1 Score: 373 bits (957), Expect = 2.100e-128 Identity = 186/258 (72.09%), Postives = 221/258 (85.66%), Query Frame = 1
Query: 1 MPSPTPSLFDLTGQVAIVTGSTRGIGKSIAEELGRAGAKVMISSRKADACEATRAELAGMGLTVLAQPCNVGRKEEVTALVEATDKAWGRVDIMVCNAAINPYYGPLGGLPDETFDKVMSSNVKSNLWLANLVAPGMAERGGGSIIMVGSIAGLKANTIIGAYGISKAADHMLVKNLAAEWGPKNVRVNAIAPGLVKTDFAKALWEDDKLRAAREAATPLRRIGEPRDIGGIAVFLASQAAAFMTGQCIVADGGVTIV 774
MPS +LFDL+GQVA+VTGST+GIGKSIA+EL RAGAKV+ISSRKA+ACEA RAE GLT +A+PCNV RK+EV ALVE + WG++DI+VCNAA+NPYYGPL LPDETF KVM++N++S++WL+ LVAPGMAERGGG II+VGSI G+ +G YG+SKAADH L +NLA EWGPKNVRVNAIAPGL+KTDFA+ALWED+KLR +REA TPLRRIG P +IGGIAVFLAS+A +F+TGQ IVADGGVTIV
Sbjct: 1 MPS---TLFDLSGQVALVTGSTKGIGKSIAQELARAGAKVVISSRKAEACEAVRAEFEREGLTAIAKPCNVSRKDEVQALVEHSLSTWGKIDILVCNAAVNPYYGPLAKLPDETFSKVMAANLQSSIWLSALVAPGMAERGGGCIILVGSIGGILGTGTLGIYGMSKAADHALARNLAVEWGPKNVRVNAIAPGLIKTDFARALWEDEKLRTSREATTPLRRIGAPEEIGGIAVFLASKAGSFITGQTIVADGGVTIV 255
BLAST of mRNA_P-wetherbeei_contig6560.1.1 vs. uniprot
Match: A0A536ST47_9PROT (SDR family oxidoreductase n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536ST47_9PROT) HSP 1 Score: 369 bits (947), Expect = 6.990e-127 Identity = 188/254 (74.02%), Postives = 212/254 (83.46%), Query Frame = 1
Query: 13 TPSLFDLTGQVAIVTGSTRGIGKSIAEELGRAGAKVMISSRKADACEATRAELAGMGLTVLAQPCNVGRKEEVTALVEATDKAWGRVDIMVCNAAINPYYGPLGGLPDETFDKVMSSNVKSNLWLANLVAPGMAERGGGSIIMVGSIAGLKANTIIGAYGISKAADHMLVKNLAAEWGPKNVRVNAIAPGLVKTDFAKALWEDDKLRAAREAATPLRRIGEPRDIGGIAVFLASQAAAFMTGQCIVADGGVTIV 774
T SLFDL G+VA+VTGSTRGIG+SIAEEL RAGA V +SSRKADACEA RAE G VLA+PCNV RKEE+ ALV+ T WG +DI+V NAA NPYYGPL + D+ FDK++ +NVKS LWLA + P MAERGGGS +VGSI GL ANT+IGAYGISKAA H LV+NLAAEWGPKNVRVNAIAPGLVKTDFA+ALWED+ RA R AATPLRR+GEPRDIGGIAVFLAS AAAF+TGQCIVADGGV+I+
Sbjct: 2 TSSLFDLRGKVALVTGSTRGIGRSIAEELARAGAAVAVSSRKADACEAVRAEFERAGFAVLARPCNVSRKEELQALVDTTRGKWGHIDIVVANAAANPYYGPLTDISDDAFDKIIGNNVKSALWLAAMTLPQMAERGGGSFTLVGSIGGLLANTVIGAYGISKAAGHHLVRNLAAEWGPKNVRVNAIAPGLVKTDFARALWEDEARRAERLAATPLRRLGEPRDIGGIAVFLASDAAAFITGQCIVADGGVSIL 255
BLAST of mRNA_P-wetherbeei_contig6560.1.1 vs. uniprot
Match: A0A1F4AUC5_9PROT (Short-chain dehydrogenase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_66_14 TaxID=1797490 RepID=A0A1F4AUC5_9PROT) HSP 1 Score: 365 bits (938), Expect = 1.700e-125 Identity = 180/252 (71.43%), Postives = 212/252 (84.13%), Query Frame = 1
Query: 19 SLFDLTGQVAIVTGSTRGIGKSIAEELGRAGAKVMISSRKADACEATRAELAGMGLTVLAQPCNVGRKEEVTALVEATDKAWGRVDIMVCNAAINPYYGPLGGLPDETFDKVMSSNVKSNLWLANLVAPGMAERGGGSIIMVGSIAGLKANTIIGAYGISKAADHMLVKNLAAEWGPKNVRVNAIAPGLVKTDFAKALWEDDKLRAAREAATPLRRIGEPRDIGGIAVFLASQAAAFMTGQCIVADGGVTIV 774
SLFDL+G+VA+VTGST+GIGKS AEE+ RAGA+V++SSRK DACEA R E G V+A+PCN+ RKE++ +LVE T + WGR+D++V NAA NPYYGPL LPDETFDKVM +NVKS LWLANL PGMA RGGGS I+V SIAG+ ANT+IG YGISKAAD LV+NLAAEWGPKNVRVNAIAPGL+KTDFA+ALWED+K R REA TP+RR+GE R+IGG+A FLAS AA+F+TGQ IV DGGVTIV
Sbjct: 5 SLFDLSGKVALVTGSTKGIGKSAAEEMARAGARVVVSSRKGDACEAVRREFEAQGWPVIARPCNISRKEDLQSLVELTLETWGRIDVVVANAAANPYYGPLQALPDETFDKVMLNNVKSTLWLANLTLPGMAARGGGSFIVVASIAGMLANTVIGIYGISKAADLQLVRNLAAEWGPKNVRVNAIAPGLIKTDFARALWEDEKRRTEREALTPMRRLGEAREIGGVAAFLASDAASFITGQTIVVDGGVTIV 256
BLAST of mRNA_P-wetherbeei_contig6560.1.1 vs. uniprot
Match: A0A1F4EII3_9PROT (Short-chain dehydrogenase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14 TaxID=1797501 RepID=A0A1F4EII3_9PROT) HSP 1 Score: 365 bits (937), Expect = 2.410e-125 Identity = 183/252 (72.62%), Postives = 212/252 (84.13%), Query Frame = 1
Query: 19 SLFDLTGQVAIVTGSTRGIGKSIAEELGRAGAKVMISSRKADACEATRAELAGMGLTVLAQPCNVGRKEEVTALVEATDKAWGRVDIMVCNAAINPYYGPLGGLPDETFDKVMSSNVKSNLWLANLVAPGMAERGGGSIIMVGSIAGLKANTIIGAYGISKAADHMLVKNLAAEWGPKNVRVNAIAPGLVKTDFAKALWEDDKLRAAREAATPLRRIGEPRDIGGIAVFLASQAAAFMTGQCIVADGGVTIV 774
S FDL G+VA+VTGSTRGIGKSIAEELGRAGAKV ISSRK +ACE RAEL G+ V+A+PCNV RKE++ ALV+AT WG +DI+V NAA NPYYGPL +PD+ FDK++ +NVKS LWLA + GMA RGGGS I+VGS+ G+ ANT+IGAYG+SKAA H LV+NLAAEWGPKNVRVNAIAPGLVKT+FA+ALWED+ A R ATPLRR+GEPRDIGGIAVFLAS AAAF+TGQCIVADGGVTI+
Sbjct: 5 SPFDLRGKVALVTGSTRGIGKSIAEELGRAGAKVSISSRKPEACEQARAELEQNGVEVVARPCNVSRKEDLQALVDATRDRWGAIDIVVSNAASNPYYGPLASIPDDAFDKILGNNVKSVLWLAGMTLEGMASRGGGSFILVGSVGGILANTVIGAYGVSKAASHHLVRNLAAEWGPKNVRVNAIAPGLVKTEFARALWEDEARAAERIRATPLRRLGEPRDIGGIAVFLASDAAAFITGQCIVADGGVTIL 256
BLAST of mRNA_P-wetherbeei_contig6560.1.1 vs. uniprot
Match: A0A1F4CWI1_9PROT (Short-chain dehydrogenase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_68_19 TaxID=1797504 RepID=A0A1F4CWI1_9PROT) HSP 1 Score: 361 bits (926), Expect = 9.880e-124 Identity = 185/251 (73.71%), Postives = 211/251 (84.06%), Query Frame = 1
Query: 22 LFDLTGQVAIVTGSTRGIGKSIAEELGRAGAKVMISSRKADACEATRAELAGMGLTVLAQPCNVGRKEEVTALVEATDKAWGRVDIMVCNAAINPYYGPLGGLPDETFDKVMSSNVKSNLWLANLVAPGMAERGGGSIIMVGSIAGLKANTIIGAYGISKAADHMLVKNLAAEWGPKNVRVNAIAPGLVKTDFAKALWEDDKLRAAREAATPLRRIGEPRDIGGIAVFLASQAAAFMTGQCIVADGGVTIV 774
LFDL G+VA+VTGSTRGIGKSIAE+L AGAKV +SSRKA+ACE R E G VLA+PCNV RKEE+ ALV+AT + WGR+DI+V NAA NPYYGPL +PDE FDK+ ++NVKS LWLA + PGM + GGS I+VGSI GL ANT+IGAYGISKAADH LV+NLAAEWGPKNVRVNAIAPGLVKT+FA+ALWED+K R R ATPLRR+GEPRDIGGIAVFLAS AAAF+TGQCIVADGGVTI+
Sbjct: 4 LFDLGGKVALVTGSTRGIGKSIAEQLALAGAKVAVSSRKAEACEEVRKEFQSNGFEVLARPCNVSRKEELQALVDATLEKWGRIDIVVANAASNPYYGPLTAIPDEAFDKIFANNVKSVLWLAAMTLPGMTK--GGSFIVVGSIGGLIANTVIGAYGISKAADHHLVRNLAAEWGPKNVRVNAIAPGLVKTEFARALWEDEKRRNERIQATPLRRLGEPRDIGGIAVFLASDAAAFITGQCIVADGGVTIL 252
BLAST of mRNA_P-wetherbeei_contig6560.1.1 vs. uniprot
Match: A0A537DJR3_9PROT (SDR family oxidoreductase n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537DJR3_9PROT) HSP 1 Score: 361 bits (926), Expect = 1.060e-123 Identity = 180/252 (71.43%), Postives = 210/252 (83.33%), Query Frame = 1
Query: 19 SLFDLTGQVAIVTGSTRGIGKSIAEELGRAGAKVMISSRKADACEATRAELAGMGLTVLAQPCNVGRKEEVTALVEATDKAWGRVDIMVCNAAINPYYGPLGGLPDETFDKVMSSNVKSNLWLANLVAPGMAERGGGSIIMVGSIAGLKANTIIGAYGISKAADHMLVKNLAAEWGPKNVRVNAIAPGLVKTDFAKALWEDDKLRAAREAATPLRRIGEPRDIGGIAVFLASQAAAFMTGQCIVADGGVTIV 774
SLFDL G+VA+VTG+TRGIGKSIAEEL RAGA++ + SRKA+ACE R G VLA+ CNV R+EE+ ALV+ T WG +DI+V NAA+NPYYGPL G+PDE FDK++++NVKS LWLA + PGMAERGGGS I+VGSI GL ANT+IGAYGISKAADH LV+NLAAEWGPK +RVNAIAPGLVKT+FA+ALWED+K R R ATPLRR+GEP DIGGIAVFLAS AAAF+TGQCIVADGG TI+
Sbjct: 3 SLFDLNGKVALVTGATRGIGKSIAEELARAGARIALCSRKAEACEEVRKGFESKGFEVLARSCNVARREELQALVDETLAKWGGIDIVVANAAVNPYYGPLTGIPDEAFDKILATNVKSVLWLAGMTLPGMAERGGGSFIVVGSIGGLIANTVIGAYGISKAADHHLVRNLAAEWGPKGIRVNAIAPGLVKTEFARALWEDEKRRNERIQATPLRRLGEPSDIGGIAVFLASDAAAFITGQCIVADGGFTIL 254
BLAST of mRNA_P-wetherbeei_contig6560.1.1 vs. uniprot
Match: A0A521YPR4_9PROT (SDR family oxidoreductase n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521YPR4_9PROT) HSP 1 Score: 360 bits (924), Expect = 2.290e-123 Identity = 182/252 (72.22%), Postives = 210/252 (83.33%), Query Frame = 1
Query: 19 SLFDLTGQVAIVTGSTRGIGKSIAEELGRAGAKVMISSRKADACEATRAELAGMGLTVLAQPCNVGRKEEVTALVEATDKAWGRVDIMVCNAAINPYYGPLGGLPDETFDKVMSSNVKSNLWLANLVAPGMAERGGGSIIMVGSIAGLKANTIIGAYGISKAADHMLVKNLAAEWGPKNVRVNAIAPGLVKTDFAKALWEDDKLRAAREAATPLRRIGEPRDIGGIAVFLASQAAAFMTGQCIVADGGVTIV 774
SLFDL G+VA+VTGSTRGIG+SIAEELGRAGAKV +SSRK ACE R +L G+ V+A+PCNV RKEE+ ALV+AT + WG +DI+V NAA NPYYG L + DE FDK MS+NVKS LWLA + MA RGGGS I+VGS+ GL ANT+IGAYG+SKAA H LV+NLAAEWGP+NVRVNAIAPGLVKTDFA+ALWED+ A R ATPLRR+GEPRDIGGIAVFLAS+AAAF+TGQCIVADGGVTI+
Sbjct: 5 SLFDLRGKVALVTGSTRGIGRSIAEELGRAGAKVSLSSRKKPACEEARLDLEQQGIEVIARPCNVSRKEELQALVDATRERWGAIDIVVSNAASNPYYGALASISDEAFDKTMSNNVKSALWLAGMTLEHMASRGGGSFILVGSVGGLVANTVIGAYGVSKAAAHHLVRNLAAEWGPRNVRVNAIAPGLVKTDFARALWEDEARAAERIRATPLRRLGEPRDIGGIAVFLASEAAAFITGQCIVADGGVTIL 256
BLAST of mRNA_P-wetherbeei_contig6560.1.1 vs. uniprot
Match: A0A537A826_9PROT (SDR family oxidoreductase n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537A826_9PROT) HSP 1 Score: 360 bits (923), Expect = 3.610e-123 Identity = 186/256 (72.66%), Postives = 212/256 (82.81%), Query Frame = 1
Query: 22 LFDLTGQVAIVTGSTRGIGKSIAEELGRAGAKVMISSRKADACEATRAELAGMGLTVLAQPCNVGRKEEVTALVEATDKAWGRVDIMVCNAAINPYYGPLGGLPDETFDKVMSSNVKSNLWLANLVAPGMAERG-----GGSIIMVGSIAGLKANTIIGAYGISKAADHMLVKNLAAEWGPKNVRVNAIAPGLVKTDFAKALWEDDKLRAAREAATPLRRIGEPRDIGGIAVFLASQAAAFMTGQCIVADGGVTIV 774
LFDLTG+VA+VTGSTRGIGKSIAEEL RAGA V ISSRKADACE RAELA G +LA+PCN+ RKEE+ ALV+AT W R+DI+V NAA NPYYGPL G+ DE FDK++++NVKS LWLA + PG+AER GS +VGSI GL ANT+IGAYG+SKA H LV+NLAAEWGPKNVRVNAIAPGLVKT+FA+ALWED+K RA R ATPLRR+GEPRDIGGIAVFLAS AAAF+TGQ IVADGGVTI+
Sbjct: 4 LFDLTGKVALVTGSTRGIGKSIAEELARAGASVAISSRKADACEKARAELAAQGFDILARPCNISRKEELQALVDATLAKWRRLDIVVANAAANPYYGPLTGISDEAFDKIITNNVKSVLWLAAMTLPGIAERAQREGTSGSFTLVGSIGGLLANTVIGAYGMSKATGHHLVRNLAAEWGPKNVRVNAIAPGLVKTEFARALWEDEKRRAERIEATPLRRLGEPRDIGGIAVFLASDAAAFITGQVIVADGGVTIL 259 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6560.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6560.1.1 >prot_P-wetherbeei_contig6560.1.1 ID=prot_P-wetherbeei_contig6560.1.1|Name=mRNA_P-wetherbeei_contig6560.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=259bp MPSPTPSLFDLTGQVAIVTGSTRGIGKSIAEELGRAGAKVMISSRKADACback to top mRNA from alignment at P-wetherbeei_contig6560:112..888+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6560.1.1 ID=mRNA_P-wetherbeei_contig6560.1.1|Name=mRNA_P-wetherbeei_contig6560.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=777bp|location=Sequence derived from alignment at P-wetherbeei_contig6560:112..888+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6560:112..888+ >mRNA_P-wetherbeei_contig6560.1.1 ID=mRNA_P-wetherbeei_contig6560.1.1|Name=mRNA_P-wetherbeei_contig6560.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=777bp|location=Sequence derived from alignment at P-wetherbeei_contig6560:112..888+ (Phaeothamnion wetherbeei SAG_119_79)back to top |