mRNA_P-wetherbeei_contig6509.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6509.1.1
Unique NamemRNA_P-wetherbeei_contig6509.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6509.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6509contigP-wetherbeei_contig6509:32..3414 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1122225.AULQ01000007_gene2285
PFAMsSulfotransfer_1
Model size2541
Max annot lvl976|Bacteroidetes
Hectar predicted targeting categorysignal peptide
Exons5
Evalue5.09e-05
EggNOG OGsCOG0500@1|root,COG2226@2|Bacteria,4PNAY@976|Bacteroidetes
DescriptionSulfotransferase domain
Cds size1203
COG categoryQ
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6509.1.1prot_P-wetherbeei_contig6509.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6509 1748..3381 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186918.8478847-UTR-P-wetherbeei_contig6509:31..8941683186918.8478847-UTR-P-wetherbeei_contig6509:31..894Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig6509 32..894 -
1683186918.8594348-UTR-P-wetherbeei_contig6509:919..11941683186918.8594348-UTR-P-wetherbeei_contig6509:919..1194Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig6509 920..1194 -
1683186918.8697693-UTR-P-wetherbeei_contig6509:1580..17471683186918.8697693-UTR-P-wetherbeei_contig6509:1580..1747Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig6509 1581..1747 -
1683186918.9143486-UTR-P-wetherbeei_contig6509:3381..34141683186918.9143486-UTR-P-wetherbeei_contig6509:3381..3414Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig6509 3382..3414 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186918.8798728-CDS-P-wetherbeei_contig6509:1747..21431683186918.8798728-CDS-P-wetherbeei_contig6509:1747..2143Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6509 1748..2143 -
1683186918.8938382-CDS-P-wetherbeei_contig6509:2470..30721683186918.8938382-CDS-P-wetherbeei_contig6509:2470..3072Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6509 2471..3072 -
1683186918.9039776-CDS-P-wetherbeei_contig6509:3176..33811683186918.9039776-CDS-P-wetherbeei_contig6509:3176..3381Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6509 3177..3381 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6509.1.1

>prot_P-wetherbeei_contig6509.1.1 ID=prot_P-wetherbeei_contig6509.1.1|Name=mRNA_P-wetherbeei_contig6509.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=401bp
MPPKRTSRSAGFSVLLFFGAILRGVTVRITSREHTGESAGVLNIEKIADA
PGMTSGANPSFVILGVGKGGTTDLHETIMQSFGDLFNTPIRKEVSDLLAG
ANIYRHGKTSFNESYYMELLGKSDGLKPFTIDATPQYIHYPELVTSHLRS
VTNDSIGLLLLRHPVTRCRSLYSYSQYHIPRPGLHALTPRFSLLNGSIWT
FAKAAAWELDLYQRHGRAELAVLNGAGASWRERVDAFNSLSDLYYDTISD
IPLVTQPGKQLLLNGIYPQNVKAFVALKGFGRQRLLILQSELYWANVEPY
LREIIGPFMFGRGRPDMQRREWSPYRSNQTVYIEESTMLPELACRLQKFY
NPSMRRLMEVLAAPEVASVAYVWPPTDARSAAWWQRAEDSFCAKEPSVRW
*
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mRNA from alignment at P-wetherbeei_contig6509:32..3414-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6509.1.1 ID=mRNA_P-wetherbeei_contig6509.1.1|Name=mRNA_P-wetherbeei_contig6509.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3383bp|location=Sequence derived from alignment at P-wetherbeei_contig6509:32..3414- (Phaeothamnion wetherbeei SAG_119_79)
TCTGTGCGAGGAAAGGCGGAGGTCAACGGCGTGATGCCACCGAAGCGTAC
ATCTCGTTCCGCCGGGTTTTCTGTCCTCCTATTCTTTGGCGCAATTTTGC
GAGGAGTTACGGTCCGGATCACCTCACGAGAGCACACAGGAGAGAGTGCA
GGAGTCCTCAACATTGAGAAAATCGCAGACGCACCTGGCATGACAAGTGG
GGCGAACCCGAGTTTCGTTATCCTGGGGGTTGGAAAAGGTGAGGCTGTGC
TTTCTTTCCTTTTCATCTTGCACGCGGTTCAAGTAACTCATGCAAGAGCG
AATTGCTTTTGTGTTGTCCTGCACAAAAATGAATGGAAAAAGGTGGTACG
ACGGACCTACATGAAACTATCATGCAAAGCTTTGGCGACCTTTTCAACAC
GCCTATTCGAAAGGAGGTTTCTGACCTGCTCGCCGGCGCAAATATCTATC
GACACGGGAAGACGTCCTTCAACGAGTCGTACTACATGGAGCTGCTTGGC
AAGTCTGACGGATTAAAACCGTTCACCATCGACGCGACCCCGCAGTACAT
CCACTATCCGGAGCTCGTCACGTCCCACCTCCGAAGCGTGACCAATGACA
GCATCGGTCTCCTACTCCTGCGCCACCCCGTGACTCGTTGTCGCAGCCTA
TACAGTTATTCCCAGTATCACATTCCACGGCCGGGGCTGCATGCATTGAC
CCCCCGCTTCTCTCTGCTCAACGGCTCTATCTGGACCTTTGCCAAAGCGG
CCGCATGGGAGCTGGACCTGTACCAGAGGCATGGCCGTGCCGAACTCGCT
GTTCTGAACGGCGCAGGCGCCAGCTGGCGGGAGCGCGTCGATGCGTTTAA
CAGTCTGTCTGACTTGTACTACGACACAATCAGCGACATTCCACTTGTAA
CGCAACCTGGGAAGCAGCTTCTTCTGAACGGCATTTATCCACAGGTGGGT
GGACCCGGCCGGCTCAGAGAGCGGAGGCCATATAAGCGCGGGCGGTTGGA
GAACCGGCTGGTTGAGACCAGAGCTTTCATTGCTGGCTTGGCTGTGGCAA
AGGGAGGCAAGGCGGGGTCGCCCCTATCCCTTTGCCGCTGTAGTGTGCCT
AGCATACGTGTGCCTCTTTGCTTCGTTGCACTGCCACGTTCTCTTTCCAA
ATAGCTTGCTTGTCCATCAGGTTTCACCGCCTTCTATTTGCTATCAAGAT
TTGCCGCTTCCCCGTATGGCCGCTTGTATCCTGTTCCCGCCGCACCTGGC
GAGCAAACACTTTGCCTGCAGAACGTGAAAGCCTTCGTGGCGCTCAAAGG
TTTTGGACGCCAGCGGTTGCTAATCCTTCAATCGGAGCTCTACTGGGCCA
ATGTTGAGCCATACCTCCGAGAAATCATTGGGCCGTTTATGTTTGGGAGA
GGTCGACCGGATATGCAACGGAGAGAATGGTCGCCATACCGCAGCAACCA
GACCGTTTACATAGAGGAGTCGACCATGCTGCCGGAGCTGGCCTGCCGGT
TGCAAAAATTCTACAACCCATCAATGCGGCGGCTGATGGAGGTGCTCGCC
GCGCCGGAGGTGGCGTCGGTCGCCTACGTGTGGCCGCCGACGGATGCGCG
CTCCGCTGCCTGGTGGCAGCGCGCAGAGGACTCTTTTTGCGCGAAGGAGC
CGTCAGTGAGATGGTAGGGATGAAAGTTTGCTGTTTGCCACCCAATAGGA
GATGTGGCCAGGAGCTTTCAAAAACAAGTTTCATCCAGCCAGCGCACAAA
TTTCCTTTCATCTATAAAATAGATATGCGCACTTCCCCCAGGGACTCGCT
TGACACCAAACGGCGCACTTCCACTGCCAAGCAGGTAAGGAGGACACGGC
GAGCCTCCGCTTGAAGAGAGCTTTTGCAGTGGCTAATGCTGTTGGTCGCT
TAGTGATATTCACGTGGCAAAAATGGTTGATGGCGGGGGCTGGTGCATAG
TTGCGAAGCAATGCCACCTTCTTCGTCACTGTCCCGCAAACTTCTTTCCC
GCGATTCGATGGCCACCAGCCAGTGAGAAAAGCGCGCAAAGCAAAGAATT
TCGTCGCTCAAGAGGAACCACATTCGACCTTCAAACCCCTCCCATAGCTC
TTCCAAACATTCCAACTAATGAGACAAAAAGGACAGCTAGATGAGAGCGC
GCCGCAGAAATTGACGATATCTGACCCCCGAGCTCCTTCCCGCAATCCTA
CTTGCTGCAACTGTCGCAAGGCGGACAAGGTGACGCGCTCGCCCCCGTCA
AGTATCCCAATAGCTTCATCCGCAGAGCGGCGCGACAAAGGCACAGCTGA
TGGCGGCGTCAAAGTCGAACATGTCGTTCGGGACGGCCGTACCCGCGTTG
AGGCGGTCCAGCACCGGCAACCGCAGGGGCACGCACGTTAACAGACGTGC
AACTCGGTGGCGATGAGGGTGGCGGCGACAGCCGCCGGACCCGTCCTCCG
CCGCTGCGTGGAGTTGCTACTTAATGCGGCGGCGGAGGAGGCCGCGGCGG
CGGCGACAGCGATGGCGGCGTCTGCGTTCGCGGTTGCAGCGTCACCAGCG
GCCGTGGCCGCAGCGGCGGCAGCCACATCGGCAGAGTGGCCATAGGAGGC
GGCGGTGGCTGCTGTCTCAACCGCCGCGGCGGCGGTGGCAGAACCTGCCA
GGTCCGTCGAGGAATCCACAGCTGGCCCGACCACGCAAGCAGTTGTAATG
GTGCGTGGCGAATGAGAGATGCCATTTTTCCCGGCGTCCGCCGGCCCGAC
CACTTCGAGAAGAAGCAGCTCGCTCCTCTCTCTCATTCCTGAGCAACGCG
GGTAACGATGGCAGCGGCGCAGCGACGGCAGAGGCAGCGACAGCAGAGAC
AGCGTCGGCAGGCGAGGCGTCAGCGGCGGCAAGACGATGAACGGGGCGGA
CGGTAAGAGAAGCAGCTGTCCAACAGTACGACAAAAGCTAAAGCGCCTTA
TCGCCAATTTGATACTCGAACAAAGCAAAATTGCCGGCCAGTAAAGTAGC
CACACAGAGCAAAGGGGAAGCATGGCTGGGGGGGAAGACAGCCATCGGGA
ACCCTTCCTACGCACTCGCTCGTTGATGGCGCGCCTGCTGGAAGAATCCG
GGCGTGGTGCGTGGGCTTGACACTGACGGTGACGAGAGCCCTCATCTGCG
CGAAGGTCTTGTGCGCCCAGCACAGGACGGCGGTCACCAGCAGCTGCCTG
CTCTTCTTCGCTGTAACACCAGCACCTCTTTGAGGAAATGGCCGAAGCGG
TTCGCAGCAGGGCGGCAGTGTCAGGCGGCGGCAAACGGCGGCAAACGGCT
GTATGAGGCATGCGATGGTGGCAAGTAGCGATCAAGACCGGTGGGAGGGC
GAGATCCGGCGAAAGCAGAAACGACTAAAAGAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6509:32..3414-

>mRNA_P-wetherbeei_contig6509.1.1 ID=mRNA_P-wetherbeei_contig6509.1.1|Name=mRNA_P-wetherbeei_contig6509.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1203bp|location=Sequence derived from alignment at P-wetherbeei_contig6509:32..3414- (Phaeothamnion wetherbeei SAG_119_79)
ATGCCACCGAAGCGTACATCTCGTTCCGCCGGGTTTTCTGTCCTCCTATT
CTTTGGCGCAATTTTGCGAGGAGTTACGGTCCGGATCACCTCACGAGAGC
ACACAGGAGAGAGTGCAGGAGTCCTCAACATTGAGAAAATCGCAGACGCA
CCTGGCATGACAAGTGGGGCGAACCCGAGTTTCGTTATCCTGGGGGTTGG
AAAAGGTGGTACGACGGACCTACATGAAACTATCATGCAAAGCTTTGGCG
ACCTTTTCAACACGCCTATTCGAAAGGAGGTTTCTGACCTGCTCGCCGGC
GCAAATATCTATCGACACGGGAAGACGTCCTTCAACGAGTCGTACTACAT
GGAGCTGCTTGGCAAGTCTGACGGATTAAAACCGTTCACCATCGACGCGA
CCCCGCAGTACATCCACTATCCGGAGCTCGTCACGTCCCACCTCCGAAGC
GTGACCAATGACAGCATCGGTCTCCTACTCCTGCGCCACCCCGTGACTCG
TTGTCGCAGCCTATACAGTTATTCCCAGTATCACATTCCACGGCCGGGGC
TGCATGCATTGACCCCCCGCTTCTCTCTGCTCAACGGCTCTATCTGGACC
TTTGCCAAAGCGGCCGCATGGGAGCTGGACCTGTACCAGAGGCATGGCCG
TGCCGAACTCGCTGTTCTGAACGGCGCAGGCGCCAGCTGGCGGGAGCGCG
TCGATGCGTTTAACAGTCTGTCTGACTTGTACTACGACACAATCAGCGAC
ATTCCACTTGTAACGCAACCTGGGAAGCAGCTTCTTCTGAACGGCATTTA
TCCACAGAACGTGAAAGCCTTCGTGGCGCTCAAAGGTTTTGGACGCCAGC
GGTTGCTAATCCTTCAATCGGAGCTCTACTGGGCCAATGTTGAGCCATAC
CTCCGAGAAATCATTGGGCCGTTTATGTTTGGGAGAGGTCGACCGGATAT
GCAACGGAGAGAATGGTCGCCATACCGCAGCAACCAGACCGTTTACATAG
AGGAGTCGACCATGCTGCCGGAGCTGGCCTGCCGGTTGCAAAAATTCTAC
AACCCATCAATGCGGCGGCTGATGGAGGTGCTCGCCGCGCCGGAGGTGGC
GTCGGTCGCCTACGTGTGGCCGCCGACGGATGCGCGCTCCGCTGCCTGGT
GGCAGCGCGCAGAGGACTCTTTTTGCGCGAAGGAGCCGTCAGTGAGATGG
TAG
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