mRNA_P-wetherbeei_contig65.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig65.3.1 vs. uniprot
Match: A0A835ZA98_9STRA (Cytochrome c oxidase assembly protein PET191 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA98_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 4.600e-22 Identity = 41/68 (60.29%), Postives = 55/68 (80.88%), Query Frame = 1
Query: 115 MTKDCKEHARALVECMQQTECVEKGGSITXXIKVQKAVAQCDMERRLYFECRRGQLDMRTRIRGSRSF 318
M+ DCKEHARAL+ CMQ+++C++ GG + +K + V QC+++RR YFECRRGQLDMRTRIRG RS+
Sbjct: 1 MSSDCKEHARALLACMQESKCMQGGGKLRECLKTDE-VHQCELQRRSYFECRRGQLDMRTRIRGPRSY 67
BLAST of mRNA_P-wetherbeei_contig65.3.1 vs. uniprot
Match: D7FZB9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZB9_ECTSI) HSP 1 Score: 73.9 bits (180), Expect = 4.300e-15 Identity = 35/68 (51.47%), Postives = 47/68 (69.12%), Query Frame = 1
Query: 115 MTKDCKEHARALVECMQQTECVEKGGSITXXIKVQKAVAQCDMERRLYFECRRGQLDMRTRIRGSRSF 318
M +DCKE ARAL CM++T+C++ GG + +K C + + +FEC+RGQLDMRTRIRG RSF
Sbjct: 1 MGRDCKEAARALYACMKKTQCMKDGGRLKDCLKTSDREF-CRQDHQSFFECKRGQLDMRTRIRGERSF 67
BLAST of mRNA_P-wetherbeei_contig65.3.1 vs. uniprot
Match: K8YUW7_NANGC (Cytochrome c oxidase assembly mitochondrial n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YUW7_NANGC) HSP 1 Score: 73.6 bits (179), Expect = 6.090e-15 Identity = 36/68 (52.94%), Postives = 47/68 (69.12%), Query Frame = 1
Query: 115 MTKDCKEHARALVECMQQTECVEKGGSITXXIKVQKAVAQCDMERRLYFECRRGQLDMRTRIRGSRSF 318
M K CKE A AL+ CMQQ C++ GGS+T +K + A C ++R YF C+R QLDMRTRIRG+R +
Sbjct: 1 MPKSCKEAAYALLACMQQQPCMKTGGSLTECLKSEDVDA-CSVQRNAYFLCKRSQLDMRTRIRGTRVY 67
BLAST of mRNA_P-wetherbeei_contig65.3.1 vs. uniprot
Match: A0A482S5P5_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S5P5_9ARCH) HSP 1 Score: 71.2 bits (173), Expect = 5.040e-14 Identity = 31/68 (45.59%), Postives = 45/68 (66.18%), Query Frame = 1
Query: 115 MTKDCKEHARALVECMQQTECVEKGGSITXXIKVQKAVAQCDMERRLYFECRRGQLDMRTRIRGSRSF 318
M K CK+ AR L++CM +T+CV++G + +K + +C RR YFEC+RG LDMR RIRG + +
Sbjct: 1 MGKSCKDIARTLLDCMAETQCVQQGQDVKECMKTMEGEDRCGQLRRAYFECKRGSLDMRYRIRGPKVY 68
BLAST of mRNA_P-wetherbeei_contig65.3.1 vs. uniprot
Match: K3X2Q5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X2Q5_GLOUD) HSP 1 Score: 61.6 bits (148), Expect = 3.890e-10 Identity = 30/67 (44.78%), Postives = 44/67 (65.67%), Query Frame = 1
Query: 115 MTKDCKEHARALVECMQQTECVEKGG-SITXXIKVQKAVAQCDMERRLYFECRRGQLDMRTRIRGSR 312
M K C++ A AL +CM EC+ G ++ +K+++ +C R+ YFEC+RGQLDMRTRIRG +
Sbjct: 1 MGKSCRDMAEALRDCMVTEECMSDGTRTLKQCLKMKEYAHECRGYRQAYFECKRGQLDMRTRIRGPK 67
BLAST of mRNA_P-wetherbeei_contig65.3.1 vs. uniprot
Match: L1JBB4_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JBB4_GUITC) HSP 1 Score: 60.8 bits (146), Expect = 7.030e-10 Identity = 26/66 (39.39%), Postives = 40/66 (60.61%), Query Frame = 1
Query: 115 MTKDCKEHARALVECMQQTECVEKGGSITXXIKVQKAVAQCDMERRLYFECRRGQLDMRTRIRGSR 312
M+ CK L+ C+ T C +GG++ ++ + C R+++FECRRGQ+DMR RIRG+R
Sbjct: 1 MSTSCKNLKNKLLICISTTPCANRGGTVKQCLQDNELPEDCKKIRQMFFECRRGQMDMRNRIRGNR 66
BLAST of mRNA_P-wetherbeei_contig65.3.1 vs. uniprot
Match: A0A8K1CG31_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CG31_PYTOL) HSP 1 Score: 60.5 bits (145), Expect = 1.040e-9 Identity = 29/67 (43.28%), Postives = 43/67 (64.18%), Query Frame = 1
Query: 115 MTKDCKEHARALVECMQQTECVEKGG-SITXXIKVQKAVAQCDMERRLYFECRRGQLDMRTRIRGSR 312
M K C++ A L +CM + EC+ G ++ +K+++ +C R YFEC+RGQLDMRTRIRG +
Sbjct: 1 MGKSCRDMAELLRDCMVEQECMRDGTRTLKQCLKMREYAHECSELRYAYFECKRGQLDMRTRIRGPK 67
BLAST of mRNA_P-wetherbeei_contig65.3.1 vs. uniprot
Match: A0A5D6XTU3_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XTU3_9STRA) HSP 1 Score: 59.7 bits (143), Expect = 2.360e-9 Identity = 29/59 (49.15%), Postives = 41/59 (69.49%), Query Frame = 1
Query: 139 ARALVECMQQTECVEKGG-SITXXIKVQKAVAQCDMERRLYFECRRGQLDMRTRIRGSR 312
A AL +CMQQ +C+ G S+ +++++ +C R+ YFECRRGQLDMRTRIRG +
Sbjct: 2 AEALRDCMQQEDCMADGSRSLKECLRLKEFAHECRGYRQAYFECRRGQLDMRTRIRGPK 60
BLAST of mRNA_P-wetherbeei_contig65.3.1 vs. uniprot
Match: A0A5A8EH60_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EH60_CAFRO) HSP 1 Score: 59.3 bits (142), Expect = 3.250e-9 Identity = 27/62 (43.55%), Postives = 39/62 (62.90%), Query Frame = 1
Query: 127 CKEHARALVECMQQTECVEKGGSITXXIKVQKAVAQCDMERRLYFECRRGQLDMRTRIRGSR 312
C++ L +C+ +++C+ G S ++ V QCD+ RR +ECRRGQLD RTRIRG R
Sbjct: 8 CRDAMHQLAQCLAKSQCISDGHSARECMQ-NGEVPQCDLSRRALYECRRGQLDARTRIRGQR 68
BLAST of mRNA_P-wetherbeei_contig65.3.1 vs. uniprot
Match: A0A8K0F2D8_ANDGO (Mitochondrial CIV assembly protein Coa5/Pet191 n=1 Tax=Andalucia godoyi TaxID=505711 RepID=A0A8K0F2D8_ANDGO) HSP 1 Score: 58.9 bits (141), Expect = 3.420e-9 Identity = 31/65 (47.69%), Postives = 38/65 (58.46%), Query Frame = 1
Query: 115 MTKDCKEHARALVECMQQTECVEKGGSITXXIKVQ-KAVAQCDMERRLYFECRRGQLDMRTRIRG 306
M K CK L+ C+ T C + GGS + +A A CD R++YFECRRG LDMR RIRG
Sbjct: 1 MGKSCKGIRAELIACLIGTPCGQNGGSPKECLHGHPEAAAACDQLRKMYFECRRGNLDMRKRIRG 65 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig65.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig65.3.1 >prot_P-wetherbeei_contig65.3.1 ID=prot_P-wetherbeei_contig65.3.1|Name=mRNA_P-wetherbeei_contig65.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=69bp MTKDCKEHARALVECMQQTECVEKGGSITECIKVQKAVAQCDMERRLYFEback to top mRNA from alignment at P-wetherbeei_contig65:1543..1920+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig65.3.1 ID=mRNA_P-wetherbeei_contig65.3.1|Name=mRNA_P-wetherbeei_contig65.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=378bp|location=Sequence derived from alignment at P-wetherbeei_contig65:1543..1920+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig65:1543..1920+ >mRNA_P-wetherbeei_contig65.3.1 ID=mRNA_P-wetherbeei_contig65.3.1|Name=mRNA_P-wetherbeei_contig65.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=207bp|location=Sequence derived from alignment at P-wetherbeei_contig65:1543..1920+ (Phaeothamnion wetherbeei SAG_119_79)back to top |