mRNA_P-wetherbeei_contig65.13.4 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig65.13.4 vs. uniprot
Match: A0A7S1WIQ9_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1WIQ9_ALECA) HSP 1 Score: 171 bits (433), Expect = 1.530e-43 Identity = 111/273 (40.66%), Postives = 155/273 (56.78%), Query Frame = 3
Query: 1050 VVAADSLSSALAGAGAPAWMCHRTINLVVVSIFLLLPLCLLPTLQALSYPSFLGLVAMLYVLWFMAYRYYDGSYLPTGRFGQEVPVGDDYIGGXXXXXXXSWNPS-GLLLLFNCLGTAYMCHYNAPKVYLELKDRSVPRFAAVAVAAFTFSAALYAATAVVAWLSFGAATKDSFLDNYNNRDPLATAAQAMVGVTTIFTYPLLLVGTRDGLLGLAQVKEPSRATFVLLTASILAAATLLAVVVRDLTFVAALGGALLSSAIIYILPQIMHLRL 1865
+V +DS S+ L GAP +C R L +S+F++LPLCL+P L ALSY SF G+ AMLY + FMA R DGSY G F G +W+ + L+L + LGTA HYNAP+ Y +L+DRSV RF V +F + A+ AT +L+FGAA+K + L NY+ RDPLATAA+ V + + TYPL G RDG++ L ++ F L T +L+ T LA + ++ FV L GA+ + +YI P ++L L
Sbjct: 38 IVISDSFSAILHSFGAPLALCSRNTVLGGMSLFVILPLCLVPNLAALSYTSFFGVAAMLYTMAFMAIRCLDGSYALGGSFYDAALAAGSASG--------TWSVNKSTLVLVSALGTACSAHYNAPRYYEQLRDRSVGRFNKVVACSFGLAVAMCLATMSAGYLTFGAASKGNILLNYSTRDPLATAARIAVTSSVVCTYPLAFTGLRDGVMSLLGLRN-----FQLTTVVLLSIVTGLAYAISNVGFVVNLSGAIFGALTVYIFPCALYLML 297
BLAST of mRNA_P-wetherbeei_contig65.13.4 vs. uniprot
Match: A0A7S0FGU6_9DINO (Hypothetical protein (Fragment) n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0FGU6_9DINO) HSP 1 Score: 168 bits (426), Expect = 6.050e-42 Identity = 109/268 (40.67%), Postives = 151/268 (56.34%), Query Frame = 3
Query: 1050 VVAADSLSSALAGAGAPAWMCHRTINLVVVSIFLLLPLCLLPTLQALSYPSFLGLVAMLYVLWFMAYRYYDGSYLPTGRFGQEVPVGDDYIGGXXXXXXXSWNPSGLLLLFNCLGTAYMCHYNAPKVYLELKDRSVPRFAAVAVAAFTFSAALYAATAVVAWLSFGAATKDSFLDNYNNRDPLATAAQAMVGVTTIFTYPLLLVGTRDGLLGLAQVKEPSRATFVLLTASILAAATLLAVVVRDLTFVAALGGALLSSAIIYILPQIM 1853
+V ADS S+ L G+PA + R + +V++F+LLPLCLLP L ALSY S LG + MLY FM R DGSY P GRF + S N S L+L+ L TA HYNAPK Y +L++RSV RF V A+F + A+ +L+FGAA+K + L NY+ DPLAT A+ V + + T+PL G RDG + L V +R F + T +L+ T LA+ +R++ FV LGGA+ + +YI P ++
Sbjct: 141 IVVADSFSAILQSFGSPAALSGRNTVMGIVALFVLLPLCLLPDLSALSYTSLLGSLGMLYTTTFMTIRCLDGSYAPGGRFFSST------LAAIGAPDRWSINVSTLVLVCT-LSTACSAHYNAPKFYDQLRNRSVGRFNIVVTASFGLAVAMCLMAMCAGYLTFGAASKGNILLNYSTSDPLATVARIAVSGSVVCTFPLAFTGLRDGAMALLGVPS-TRRNFCVATVGLLSLVTGLALAIRNVAFVVNLGGAIFGALTVYIFPSVL 400
BLAST of mRNA_P-wetherbeei_contig65.13.4 vs. uniprot
Match: A0A836CMH1_9STRA (Transmembrane amino acid transporter protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMH1_9STRA) HSP 1 Score: 167 bits (422), Expect = 2.950e-41 Identity = 103/275 (37.45%), Postives = 152/275 (55.27%), Query Frame = 3
Query: 1050 VVAADSLSSALAGAGAPAWMCHRTINLVVVSIFLLLPLCLLPTLQALSYPSFLGLVAMLYVLWFMAYRYYDGSYLPTGRFGQEVPVGDDYIGGXXXXXXXSWNPSGLLLLFNCLGTAYMCHYNAPKVYLELKDRSVPRFAAVAVAAFTFSAALYAATAVVAWLSFGAATKDSFLDNYNNRDPLATAAQAMVGVTTIFTYPLLLVGTRDGLLGLAQVKEPSRATFVLLTASILAAATLLAVVVRDLTFVAALGGALLSSAIIYILPQIMHLRLLEG 1874
++ D+ ++ APAW+ +R L +S LLPLCL+ L L Y S +G+ LY MA RY+DGSY GRF G + NP L+L+ + L T+++ HYNAPK Y ELKD++VP++ V +F S L+ V +L+FG + L+NY N D LAT + +G + +F YPL + TR+G+ V +P++ + T +IL+A T A+V+R+L FV A GGALL SAIIY+ P +M + +G
Sbjct: 128 IIIGDTFAALAQTFAAPAWLAYRPTILSAISGVFLLPLCLMTDLSPLRYTSIVGIAGTLYTAGVMALRYFDGSYALGGRF---FNAAASAAKGPLFTGSAALNPLSLILV-SMLSTSFIAHYNAPKFYHELKDKTVPKYNTVVGTSFGASILLFVVMTVFPFLTFGGHSSGLILNNYANGDNLATMCRLAIGASIVFGYPLTFITTREGVFSALGVTKPTKTQIRVATVAILSALTGCAMVLRNLGFVVAFGGALLGSAIIYVFPAVMWVGKCKG 398
BLAST of mRNA_P-wetherbeei_contig65.13.4 vs. uniprot
Match: A0A7S4T5V4_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4T5V4_9STRA) HSP 1 Score: 158 bits (400), Expect = 8.240e-38 Identity = 104/274 (37.96%), Postives = 162/274 (59.12%), Query Frame = 3
Query: 1041 TLGVVAADSLSSALAGAGAPAWMCHRTINLVVVSIFLLLPLCLLPTLQALSYPSFLGLVAMLYVLWFMAYRYYDGSYLPTGRFGQEV-PVGDDYIGGXXXXXXXSWNPSGLLLLFNCLGTAYMCHYNAPKVYLELKDRSVPRFAAVAVAAFTFSAALYAATAVVAWLSFGAATKDSFLDNYNNRDPLATAAQAMVGVTTIFTYPLLLVGTRDGLLGLAQVKEPSRATFVL--LTASILAAATLLAVVVRDLTFVAALGGALLSSAIIYILPQIM 1853
T +V AD+ LA G + I L V +LLPLCL+ L +L+ S +G++ M Y + R++ +Y P GRF ++ P G S P L+L+ + L TAY+ H+NAPK Y ELK+ ++ RF V ++F+ S ALYA + + +L+FG+A + L+NY+ D L + ++ V ++ IF+YPLL VGTRDGLL L ++KE R +L ++ ++LA T+LA+ V DLTFVA++ G++L +A+I+I P +M
Sbjct: 171 TYSMVLADTFKDLLAATGIAVSRSNALIGLTSV---VLLPLCLVKNLSSLAPFSLVGIMGMAYTSIAIGIRFFGSAYKPAGRFLPDLAPHMQPAFGSTGALGALS--PKSLILI-SMLSTAYIAHFNAPKFYRELKNNTMDRFKTVVTSSFSISVALYAIVSAMGFLTFGSAIQGLILNNYSTNDVLLSVSRFAVAISLIFSYPLLFVGTRDGLLDLIRLKEEERTNSLLNQVSVALLAITTVLALKVTDLTFVASMSGSVLGTALIFIYPTLM 438
BLAST of mRNA_P-wetherbeei_contig65.13.4 vs. uniprot
Match: A0A7S3XNB8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XNB8_HETAK) HSP 1 Score: 152 bits (384), Expect = 3.790e-37 Identity = 96/264 (36.36%), Postives = 146/264 (55.30%), Query Frame = 3
Query: 1062 DSLSSALAGAGAPAWMCHRTINLVVVSIFLLLPLCLLPTLQALSYPSFLGLVAMLYVLWFMAYRYYDGSYLPTGRFGQEVPVGDDYIGGXXXXXXXSWNPSGLLLLFNCLGTAYMCHYNAPKVYLELKDRSVPRFAAVAVAAFTFSAALYAATAVVAWLSFGAATKDSFLDNYNNRDPLATAAQAMVGVTTIFTYPLLLVGTRDGLLGLAQVKEPSRATFVLLTASILAAATLLAVVVRDLTFVAALGGALLSSAIIYILPQIM 1853
D+ S+ G PA + RT L++++ ++ PLCLL L++L + S LG+ +Y MA R DGSY GRF +P + S L+L + L TA++ HYNAPK Y +LK++SVPR+ V A+F + + + +L+FG A+ L+NY+ D L T A+ + + +F YPL+ VG RDG+L LA + P TF + +L ATL ++V+ +L FV++ GGAL S +IYI P +M
Sbjct: 6 DTASALAQTFGLPAVLAARTNILLLLTGGVIFPLCLLKNLKSLQFTSLLGIGGTVYTGVAMAIRLLDGSYRTGGRFAGSIPAQPSF-----NVKGGSMAQLSSLILVSMLSTAFIAHYNAPKFYHDLKEKSVPRYNKVVYASFACAILAFVSINAFGFLTFGGASLGFVLNNYSKADTLITLARVGIFCSILFGYPLVFVGLRDGMLSLAGISNPDSKTFFASSVGLLGFATLASLVLNNLGFVSSFGGALFGSMVIYIFPTLM 264
BLAST of mRNA_P-wetherbeei_contig65.13.4 vs. uniprot
Match: A0A4D9CTY7_9STRA (Aa_trans domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CTY7_9STRA) HSP 1 Score: 155 bits (393), Expect = 1.180e-36 Identity = 107/284 (37.68%), Postives = 158/284 (55.63%), Query Frame = 3
Query: 1038 TTLGVVAADSLSSALAGA--GAPAWMCHRTINLVVVSIFLLLPLCLLPTLQALSYPSFLGLVAMLYVLWFMAYRYYDGSYLPTGRFGQEVPVGDDYIGGXXXXXXXSWNPSGLL-----LLFNCLGTAYMCHYNAPKVYLELKDRSVPRFAAVAVAAFTFSAALYAATAVVAWLSFGAATKDSFLDNYNNRDPLATAAQAMVGVTTIFTYPLLLVGTRDGLLGLAQVKEPSRATFVLLTASILAAATLLAVVVRDLTFVAALGGALLSSAIIYILPQIMHLRLL 1868
T ++ ADS SS L GA G PA + RT +V ++ +LLPLC+L + L+ S LG++ ++ +A R DGSY P G+F + + S + S LL +L + L T+++ HYNAPK Y EL++RS+P+ V +F F A +A +L+FG A++ L+NY +D LA + +G + +F YPL VG RDG+L L K PS T + T +LA + LAV +RD+ FV +LGGALL S IIYI P I+ ++ +
Sbjct: 191 TAFSIIIADSFSS-LFGATPGFPALLAQRTNVIVWMTSLVLLPLCMLKSFAPLAPFSLLGILGTVFTGAVIALRLLDGSYAPGGQFHEAIAAS-------LRPSLLSGSSSPLLSPMVFVLVSMLSTSFIAHYNAPKFYTELENRSIPKLNKVVKNSFNFCTAAFAFIMGCGYLTFGGASQGLILNNYAEQDVLAKMCRLAIGASIVFGYPLTFVGIRDGVLSLLGRKAPSARTQTVTTLVLLAVVSTLAVFLRDVGFVVSLGGALLGSCIIYIFPAIIFIKTM 466
BLAST of mRNA_P-wetherbeei_contig65.13.4 vs. uniprot
Match: A0A7S1BC54_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BC54_9STRA) HSP 1 Score: 154 bits (389), Expect = 2.470e-36 Identity = 106/278 (38.13%), Postives = 163/278 (58.63%), Query Frame = 3
Query: 1050 VVAADSLSSALAGAGAPAWMCHRTINLVVVSIFLLLPLCLLPTLQALSYPSFLGLVAMLYVLWFMAYRYYDGSYL-PTGRFGQEVPVGDDYIGGXXXXXXXSWNPSGLLLLFNCLGTAYMCHYNAPKVYLELKDRSVPRFAAVAVAAFTFSAALYAATAVVAWLSFGAATKDSFLDNYNNRDPLATAAQAMVGVTTIFTYPLLLVGTRDGLLGLAQVKEPSRATFVL--LTASILAAATLLAVVVRDLTFVAALGGALLSSAIIYILPQIMHLRLLEG 1874
++ AD++ + LA G RT L ++ +LLPLCL+ L +L+ S +GL+ M+Y M RY+ G+Y P GRF ++ G G + P L+L+ + L TAY+ H+NAPK Y ELK+ ++ RF + A+F S A Y A +A+L+FGA+T L+NY+ +D L +A++ V V+ I +YPL+ VGTRDGLL L Q+ E R +L ++ ++ TLLA V DLTFVA++ GA+L +++I+I P +M + G
Sbjct: 182 MILADTVRALLAAVGIAV---TRTTALTGLTTTVLLPLCLVKNLSSLAPFSLVGLLGMVYTAVAMGIRYFGGAYAAPGGRFLADLAPGMLPSFGAVGAAGAA-TPQALILV-SMLSTAYIAHFNAPKFYRELKNNTLARFNRMTAASFGLSVAFYFVLASLAFLTFGASTAGMVLNNYSTKDLLISASRCAVAVSLIGSYPLMFVGTRDGLLDLLQLPEKQRTDSLLNKMSVGLVGIITLLATKVTDLTFVASISGAMLGTSLIFIFPTLMFRAAVRG 454
BLAST of mRNA_P-wetherbeei_contig65.13.4 vs. uniprot
Match: A0A6S9E4U8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9E4U8_HETAK) HSP 1 Score: 154 bits (388), Expect = 3.860e-36 Identity = 99/278 (35.61%), Postives = 152/278 (54.68%), Query Frame = 3
Query: 1020 GCCIVATTLGVVAADSLSSALAGAGAPAWMCHRTINLVVVSIFLLLPLCLLPTLQALSYPSFLGLVAMLYVLWFMAYRYYDGSYLPTGRFGQEVPVGDDYIGGXXXXXXXSWNPSGLLLLFNCLGTAYMCHYNAPKVYLELKDRSVPRFAAVAVAAFTFSAALYAATAVVAWLSFGAATKDSFLDNYNNRDPLATAAQAMVGVTTIFTYPLLLVGTRDGLLGLAQVKEPSRATFVLLTASILAAATLLAVVVRDLTFVAALGGALLSSAIIYILPQIM 1853
GC + + +G D+ S+ G PA + RT L++++ ++ PLCLL L++L + S LG+ +Y MA R DGSY GRF +P + S L+L + L TA++ HYNAPK Y +LK++SVPR+ V A+F + + + +L+FG A+ L+NY+ D L T A+ + + +F YPL+ VG RDG+L LA + P TF + +L ATL ++V+ +L FV++ GGAL S +IYI P +M
Sbjct: 171 GCILYSIIIG----DTASALAQTFGLPAVLAARTNILLLLTGGVIFPLCLLKNLKSLQFTSLLGIGGTVYTGVAMAIRLLDGSYRTGGRFAGSIPAQPSF-----NVKGGSMAQLSSLILVSMLSTAFIAHYNAPKFYHDLKEKSVPRYNKVVYASFACAILAFVSINAFGFLTFGGASLGFVLNNYSKADTLITLARVGIFCSILFGYPLVFVGLRDGMLSLAGISNPDSKTFFASSVGLLGFATLASLVLNNLGFVSSFGGALFGSMVIYIFPTLM 439
BLAST of mRNA_P-wetherbeei_contig65.13.4 vs. uniprot
Match: A0A7S0Y8T3_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0Y8T3_9STRA) HSP 1 Score: 149 bits (375), Expect = 2.610e-35 Identity = 102/305 (33.44%), Postives = 166/305 (54.43%), Query Frame = 3
Query: 1026 CIVATTLGVVAADSLSSALAGAGAPAWMCHRTINLVVVSIFLLLPLCLLPTLQALSYPSFLGLVAMLYVLWFMAYRYYDGSYLPTGRFGQE-VPVGDDYIGGXXXXXXXSWNPSGLLLLFNCLGTAYMCHYNAPKVYLELKDRSVPRFAAVAVAAFTFSAALYAATAVVAWLSFGAATKDSFLDNYNNRDPLATAAQAMVGVTTIFTYPLLLVGTRDGLLGLAQVKEPSRATFVLLTASILAAATLLAVVVRDLTFVAALGGALLSSAIIYILPQIMHLRLLEGRRPAKRVLGERGPVKYGSGRA 1937
C ++ D+ S L+ G A T+ L +LLPLCL+ L +L+ S +G + M+Y M +RY+ +Y TG FG + V G + PS + + + L TA+M H+NAPK Y ELKD+++P++ V +F S +L+A A + +L+FGA + L+NY+ RD L ++ V V+ +F+YPL VG RDG+L L ++K + T +LT ++L+ T A+V+ D++FV A+ GA L + +IY+ P +M ++ + A + GE+ VK+ G A
Sbjct: 71 CAACLAYSMILGDTFVSLLSTVGIAATKLSVTLGLTGA---VLLPLCLMKNLSSLAPFSLVGSLGMIYTALAMTFRYFGKAYTATGAFGADNVAALRPKFGSVGAAG--AMTPSAAIFI-SMLSTAFMAHFNAPKFYNELKDKTLPKYYKVVSTSFAVSISLFALVAAIGFLTFGANSSGLILNNYSTRDGLMNLSRIAVAVSLVFSYPLAFVGARDGVLDLLKMKGTDK-TQNILTVALLSVITGAALVIPDVSFVMAIAGATLGNGLIYVFPALMFRGAIKKKADATK--GEKREVKFALGSA 366
BLAST of mRNA_P-wetherbeei_contig65.13.4 vs. uniprot
Match: B7GCU0_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GCU0_PHATC) HSP 1 Score: 150 bits (379), Expect = 6.380e-35 Identity = 98/273 (35.90%), Postives = 152/273 (55.68%), Query Frame = 3
Query: 1101 AWMCHRTINLVVVSIFLLLPLCLLPTLQALSYPSFLGLVAMLYVLWFMAYRYYDGSYLPTGRFGQEVPVGDDYIGGXXXXXXXSWNPSGLLLLFNCLGTAYMCHYNAPKVYLELKDRSVPRFAAVAVAAFTFSAALYAATAVVAWLSFGAATKDSFLDNYNNRDPLATAAQAMVGVTTIFTYPLLLVGTRDGLLGLAQVKEPSRATFVLLTASILAAATLLAVVVRDLTFVAALGGALLSSAIIYILPQIMHLRLLEGRRPAKRVLGERGPVK 1919
AW +T L ++ +LLPLCLL L +L+ S LG + MLY M RY+ +Y+ +G+F Q++P G + +L+ L TAYM H+NAP++Y EL++ +VPR+ V ++F S L+A A + +L+FGA + L+NY+ RD L ++ V ++ +F+YPL VG RDG+L L QV+ + LT +LAA T A+ + D++FV A G+ L +A+IYI P +M + R+ G+R VK
Sbjct: 210 AW--SKTAVLTTITSVVLLPLCLLKNLSSLAPFSLLGSLGMLYTAVAMGIRYFGKAYVGSGKFAQDLPFNLQPAFGTIGASGVFNTQTSILV--GMLSTAYMAHFNAPRIYAELENNTVPRYLKVVASSFAISIGLFATMASLGFLTFGAHSSGLILNNYSVRDTLMGISRLAVALSIVFSYPLAFVGARDGVLDLLQVQNRTPTVLNGLTVGLLAAVTAAALSIPDVSFVLAFAGSTLGNALIYIFPALMWRGAV--RKQPNSTTGQRREVK 476 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig65.13.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig65.13.4 >prot_P-wetherbeei_contig65.13.4 ID=prot_P-wetherbeei_contig65.13.4|Name=mRNA_P-wetherbeei_contig65.13.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=614bp MRQIPASTRQMEKKPLLRSAALPVYNSSIQTGITTMLFPFSHAARRSDVAback to top mRNA from alignment at P-wetherbeei_contig65:11334..15062+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig65.13.4 ID=mRNA_P-wetherbeei_contig65.13.4|Name=mRNA_P-wetherbeei_contig65.13.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3729bp|location=Sequence derived from alignment at P-wetherbeei_contig65:11334..15062+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig65:11334..15062+ >mRNA_P-wetherbeei_contig65.13.4 ID=mRNA_P-wetherbeei_contig65.13.4|Name=mRNA_P-wetherbeei_contig65.13.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1842bp|location=Sequence derived from alignment at P-wetherbeei_contig65:11334..15062+ (Phaeothamnion wetherbeei SAG_119_79)back to top |